Miyakogusa Predicted Gene
- Lj4g3v2363080.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2363080.1 Non Chatacterized Hit- tr|K3YIW0|K3YIW0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si014179,32.11,4e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Mitochondrial termination factor
repeats,Mitochodri,CUFF.50803.1
(208 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G07900.1 | Symbols: | Mitochondrial transcription terminatio... 128 2e-30
AT1G21150.1 | Symbols: | Mitochondrial transcription terminatio... 86 2e-17
AT1G61980.1 | Symbols: | Mitochondrial transcription terminatio... 79 3e-15
AT1G61990.1 | Symbols: | Mitochondrial transcription terminatio... 77 6e-15
AT5G64950.1 | Symbols: | Mitochondrial transcription terminatio... 77 8e-15
AT1G61960.1 | Symbols: | Mitochondrial transcription terminatio... 76 1e-14
AT1G62010.1 | Symbols: | Mitochondrial transcription terminatio... 74 6e-14
AT1G61970.2 | Symbols: | Mitochondrial transcription terminatio... 74 6e-14
AT1G61970.1 | Symbols: | Mitochondrial transcription terminatio... 74 6e-14
AT1G62120.1 | Symbols: | Mitochondrial transcription terminatio... 72 4e-13
AT3G46950.1 | Symbols: | Mitochondrial transcription terminatio... 71 4e-13
AT1G62110.1 | Symbols: | Mitochondrial transcription terminatio... 71 4e-13
AT5G23930.1 | Symbols: | Mitochondrial transcription terminatio... 67 1e-11
AT1G62085.1 | Symbols: | Mitochondrial transcription terminatio... 66 2e-11
AT1G62150.1 | Symbols: | Mitochondrial transcription terminatio... 66 2e-11
AT1G56380.2 | Symbols: | Mitochondrial transcription terminatio... 59 2e-09
AT1G56380.1 | Symbols: | Mitochondrial transcription terminatio... 59 2e-09
AT1G74120.1 | Symbols: | Mitochondrial transcription terminatio... 55 2e-08
AT1G79220.1 | Symbols: | Mitochondrial transcription terminatio... 55 4e-08
>AT5G07900.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:2520188-2521405 FORWARD
LENGTH=405
Length = 405
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Query: 19 KVQLLLDMGVTPSNIYLLLRTWPS--LLRCADLKEVVEEVKGLGFHPSKTLFVVALQAKR 76
+ + + GV I LLL +P + + + + + ++ + +GF+P K+ FV+A+ A
Sbjct: 212 NINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIAKQAQEMGFNPQKSTFVLAIHALS 271
Query: 77 GI-SKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWDPSV 135
G +KS+WD + ++ WGWSED I+ AF+++P M+ S +K+N M ++V + P
Sbjct: 272 GKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMMLSERKINRTMEYFVNEMNMAPRS 331
Query: 136 LQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKDASLYTPFKYTDKLFLQEFVNCFEEE 195
+ P + +SLEKR++PR SV + L+S GL+K+D SL + +K+FL++ V + EE
Sbjct: 332 IAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWSLTSLLVPVEKVFLEKLVIKY-EE 390
Query: 196 ETSKLLSLYRG 206
E +L++LY G
Sbjct: 391 ELPELMNLYLG 401
>AT1G21150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:7406406-7407578 REVERSE
LENGTH=390
Length = 390
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 92/180 (51%), Gaps = 3/180 (1%)
Query: 19 KVQLLLDMGVTPSNIYLLLRTWPSLL--RCADLKEVVEEVKGLGFHPSKTLFVVALQAKR 76
+V + ++GV +I L++ P R EV+ V GF P K FV A+ A
Sbjct: 199 RVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVLNRVCSYGFDPKKAGFVHAMVAFD 258
Query: 77 GISKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWDPSVL 136
S+S + K F+ +GWS++ + A R P + S +K+ + + V ++G +
Sbjct: 259 CTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTVSDEKIMYTLEYLVNNIGLQARDI 318
Query: 137 QAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKK-DASLYTPFKYTDKLFLQEFVNCFEEE 195
A P + S+EKR+ PR V+ LLS+GL+KK D + +T K F+ +FV +++E
Sbjct: 319 VARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKLKSSEFMDKFVLKYQDE 378
>AT1G61980.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22908162-22909418 FORWARD
LENGTH=418
Length = 418
Score = 78.6 bits (192), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 97/195 (49%), Gaps = 41/195 (21%)
Query: 49 LKEVVEEVKGLGFHPSKTLFVVALQAKRGISKSLWDAKVDAFKTWGWSEDAILDAFRRNP 108
LK+VVE +GF PS + FV AL + +S + KV+A+K G+ + + F+R P
Sbjct: 227 LKKVVE----MGFDPSTSKFVEALCVVQRLSDKNIEDKVNAYKRLGFDVEYVWTVFKRWP 282
Query: 109 KIMLYSIKKV-NAVMSFW----------------------------------VGHLGWDP 133
+ +S KK+ N + +F V + W
Sbjct: 283 NFLTHSEKKILNTIETFLGLGFSRDEFSVLIKRFPQGIGLSAEMVKKKTEFLVKKMNWPL 342
Query: 134 SVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTPFKYTDKLFLQEFVNCF 192
L + P++ GYSLEKR +PR +VVQ L+S+GL+ + S+ F TD++FL +V
Sbjct: 343 KALVSNPAVLGYSLEKRTVPRGNVVQALISKGLIGSELPSISRVFVCTDQVFLNRYVKRH 402
Query: 193 EEEE-TSKLLSLYRG 206
E+++ ++L+++YR
Sbjct: 403 EDKQLETELMAIYRA 417
>AT1G61990.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22911453-22912697 FORWARD
LENGTH=414
Length = 414
Score = 77.4 bits (189), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 49/214 (22%)
Query: 20 VQLLLDMGVTPSNIYLLLRTWPSLLRC------ADLKEVVEEVKGLGFHPSKTLFVVALQ 73
V L ++G+ PS + L L S C A LK+VVE +GF P+ T FV+AL+
Sbjct: 186 VSALRELGM-PSRLLLPLLVSKSQPVCGKENFDASLKKVVE----MGFDPTTTKFVLALR 240
Query: 74 AKRGISKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIML--------------------- 112
+S+ + KV F++ G++ D + + F++ P ++
Sbjct: 241 MLYQMSEKTIEEKVVVFRSLGFTVDDVWEIFKKTPSVLKVSKKKILKSAETFLDLGYSRA 300
Query: 113 --------------YSIKKVNAVMSFWVGHLGWDPSVLQAVPSLFGYSLEKRLMPRASVV 158
YS++ V F V + W + L P +FGYS+EKR++PR +++
Sbjct: 301 EFLMMVKRYPPCIEYSVESVKKKNEFLVKKMKWPRNALVLHPQVFGYSMEKRIIPRCNIL 360
Query: 159 QYLLSRGLMKKDASL---YTPFKYTDKLFLQEFV 189
+ LLS+GL++K + L + TD+ FL +V
Sbjct: 361 EALLSKGLLRKGSELPAVSSVLSCTDEGFLDRYV 394
>AT5G64950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:25953887-25955062 FORWARD
LENGTH=391
Length = 391
Score = 77.0 bits (188), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 6/185 (3%)
Query: 27 GVTPSNIYLLLRTWPSLLRCAD--LKEVVEEVKGLGFHPSKTLFVVALQAKRGISKSLWD 84
G+ S + LLR P + ++ L+ V LGF + + V A+ + +S+ +D
Sbjct: 192 GIVGSQLASLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFD 251
Query: 85 AKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWDPSVLQAVPSLFG 144
KV F G+SED I D RR+P ++ S K+ F++ +G + L P +
Sbjct: 252 RKVKLFMANGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLS 311
Query: 145 YSLEKRLMPRASVVQYL----LSRGLMKKDASLYTPFKYTDKLFLQEFVNCFEEEETSKL 200
Y+LEKR++PR V+Q L L KK ++ + T++ FL+++V F +E +L
Sbjct: 312 YNLEKRVIPRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEEL 371
Query: 201 LSLYR 205
L Y+
Sbjct: 372 LVAYK 376
>AT1G61960.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22902239-22903612 FORWARD
LENGTH=457
Length = 457
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 90/181 (49%), Gaps = 8/181 (4%)
Query: 16 MKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLK--EVVEEVKGLGFHPSKTLFVVALQ 73
++ KV + +G ++++ + + WPS L ++ K E +K G + L ++
Sbjct: 258 IEEKVNVYKRLGFGVADVWAIFKKWPSFLSYSEKKITHTFETLKSCGLLKHEVLLLLKKH 317
Query: 74 AKRGISKSLWDAK-VDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWD 132
K S ++ F G+S D +R P+ + Y+ + V F V ++ W
Sbjct: 318 PKCICSSEQKIVNSIETFLGLGFSRDEFAMMVKRYPQCIDYTAETVKKKTEFIVKNMNWP 377
Query: 133 PSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKDASLYTPFK----YTDKLFLQEF 188
L ++P +FGYSLEKR +PR +V++ L+S+GLM KD S P TD+ FL+ +
Sbjct: 378 LEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLM-KDGSEAPPMSSVLTSTDQAFLRRY 436
Query: 189 V 189
V
Sbjct: 437 V 437
>AT1G62010.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22915886-22917133 FORWARD
LENGTH=415
Length = 415
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 48/230 (20%)
Query: 22 LLLDMGVTPSNIYLLLRTWPSLLRC------ADLKEVVEEVKGLGFHPSKTLFVVALQAK 75
+L ++GV P LLL S C A LK+VVE +GF P+ + FV AL
Sbjct: 179 VLRELGV-PQKRLLLLLISKSQPVCGKEKFDASLKKVVE----MGFDPTTSTFVHALHML 233
Query: 76 RGISKSLWDAKVDA--------------FKTW---------------------GWSEDAI 100
+S + K+ FK W G+S D
Sbjct: 234 YQMSDKTIEEKIRVYRSVGFSVDDVWAMFKKWPRSLTHSEKKVANSIETFLGLGFSRDVF 293
Query: 101 LDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWDPSVLQAVPSLFGYSLEKRLMPRASVVQY 160
+ F+R P + YS + V F V + W + ++P + GYSLEKR +PR +V++
Sbjct: 294 MMMFKRFPPCIGYSTEAVKKKTEFLVKEMNWPVKAVASIPQVLGYSLEKRTVPRCNVIKV 353
Query: 161 LLSRGLMKKD-ASLYTPFKYTDKLFLQEFVNCFEEEE-TSKLLSLYRGGR 208
L+S+GL++ + + + T + FL +V+ ++++ ++L++++ G R
Sbjct: 354 LMSKGLLESELPPMSSVLTSTSESFLNLYVSKHDDKQLVAELMAIFTGNR 403
>AT1G61970.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 41/195 (21%)
Query: 49 LKEVVEEVKGLGFHPSKTLFVVALQAKRGISKSLWDAKVDAFKTWGW------------- 95
LK+VVE +GF P+ + FV ALQ +++ + KV +K+ G+
Sbjct: 227 LKKVVE----MGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWP 282
Query: 96 -----SEDAILDA--------FRRN---------PKIMLYSIKKVNAVMSFWVGHLGWDP 133
SE +LD+ F R+ P + S + V F V + W
Sbjct: 283 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 342
Query: 134 SVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTPFKYTDKLFLQEFV-NC 191
+ + P++FGYSLEKR++PR +V++ L+S+GLM+ + S+ T ++FL +V N
Sbjct: 343 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 402
Query: 192 FEEEETSKLLSLYRG 206
+++ ++L+++YR
Sbjct: 403 VDKQLVTELMAIYRA 417
>AT1G61970.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22904713-22905969 FORWARD
LENGTH=418
Length = 418
Score = 73.9 bits (180), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 41/195 (21%)
Query: 49 LKEVVEEVKGLGFHPSKTLFVVALQAKRGISKSLWDAKVDAFKTWGW------------- 95
LK+VVE +GF P+ + FV ALQ +++ + KV +K+ G+
Sbjct: 227 LKKVVE----MGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWP 282
Query: 96 -----SEDAILDA--------FRRN---------PKIMLYSIKKVNAVMSFWVGHLGWDP 133
SE +LD+ F R+ P + S + V F V + W
Sbjct: 283 ISLRVSEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPL 342
Query: 134 SVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTPFKYTDKLFLQEFV-NC 191
+ + P++FGYSLEKR++PR +V++ L+S+GLM+ + S+ T ++FL +V N
Sbjct: 343 KAVVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANH 402
Query: 192 FEEEETSKLLSLYRG 206
+++ ++L+++YR
Sbjct: 403 VDKQLVTELMAIYRA 417
>AT1G62120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22960326-22961639 REVERSE
LENGTH=437
Length = 437
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 38/225 (16%)
Query: 22 LLLDMGVTPSNIY-LLLRTWPSLLRCADLKEVVEEVKGLGFHPSKTLFVVALQAKRGISK 80
+L +MGV ++ LL+ + KE +++ +GF P+ FV AL G+S
Sbjct: 201 VLREMGVPQRLLFSLLISDAGDVCGKEKFKESLKKAVEIGFDPTTATFVKALNVLYGLSD 260
Query: 81 SLWDAKVDA--------------FKTW---------------------GWSEDAILDAFR 105
+ K +A FK W G+S D L +
Sbjct: 261 KGIENKFNACKRLGLAVDDVWAMFKKWPNILTKSEKKIENSVETFLGLGFSRDEFLMMVK 320
Query: 106 RNPKIMLYSIKKVNAVMSFWVGHLGWDPSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRG 165
R P+ + YS + + F V + W + ++P + GYSLEKR +PR +V++ L+S+G
Sbjct: 321 RFPQCIGYSTELMKTKTEFLVTEMNWPLKAVASIPQVLGYSLEKRTVPRCNVIKVLISKG 380
Query: 166 LMKKD-ASLYTPFKYTDKLFLQEFVNCFEEEE-TSKLLSLYRGGR 208
L++ + + + T ++FL +V ++++ ++L++++ G R
Sbjct: 381 LLESELPPISSVLTSTSEVFLYMYVRKHDDKQLVAELMAIFTGDR 425
>AT3G46950.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr3:17289452-17290804 FORWARD
LENGTH=450
Length = 450
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 107/210 (50%), Gaps = 7/210 (3%)
Query: 4 ALFGSITISLALMKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLKEVV--EEVKGLGF 61
AL +S ++ KV + +G + + I+ + + WP L+ ++ K ++ E +K G
Sbjct: 241 ALHVVYEMSEKTIEEKVNVYKRLGFSEAEIWAIFKKWPYFLKFSEKKIILMFETLKKCGL 300
Query: 62 HPSKTLFVVAL--QAKRGISKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVN 119
+ + V+ Q R + + D+ ++ F G+S D +R P YS + +
Sbjct: 301 VEEEIISVLKSRPQCIRSSEQKILDS-IEMFLGLGFSRDDFKMMVKRYPCCTAYSGETLR 359
Query: 120 AVMSFWVGHLGWDPSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLM-KKDASLYTPFK 178
V + W + +P++ GYSLEKR++PR++V++ L+S+GL+ ++ + +
Sbjct: 360 KKFEVLVKMMNWPLEAVVMIPTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLV 419
Query: 179 YTDKLFLQEFVNCFEEEETSKLLSLYRGGR 208
TD+ FL+ +V ++ KL++++ GR
Sbjct: 420 CTDQEFLKRYV-MKHDKLVPKLMAIFNRGR 448
>AT1G62110.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22958094-22959482 REVERSE
LENGTH=462
Length = 462
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 100/201 (49%), Gaps = 8/201 (3%)
Query: 16 MKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLK--EVVEEVKGLGFHPSKTLFVVALQ 73
++ +V + G +++ + + P L ++ K + +E +K G + + V+
Sbjct: 259 IEERVNVYKGFGFAVEDVWAMFKKCPYFLNSSEKKIGQTIETLKKCGLLEDEVISVLKKY 318
Query: 74 AK-RGISKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWD 132
+ G S+ ++ F G+S D + +R P+ ++ S + V + F V + W
Sbjct: 319 PQCIGTSEQKILNSIEIFLGLGFSRDEFITMVKRFPQCLILSAETVKKKIEFVVKKMNWP 378
Query: 133 PSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKDASLYTPFKY----TDKLFLQEF 188
+ + P++ GY+LEKR +PR +V++ L+S+ L+ S P TD+LFL+ +
Sbjct: 379 LKDVVSNPTVLGYNLEKRTVPRCNVIEALMSKRLLGDTGSELPPMSSVLVCTDELFLKRY 438
Query: 189 V-NCFEEEETSKLLSLYRGGR 208
V N ++E +L+++Y GR
Sbjct: 439 VRNHGDKELVLELMTIYTRGR 459
>AT5G23930.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr5:8074625-8075998 REVERSE
LENGTH=457
Length = 457
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 4 ALFGSITISLALMKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLKEVV---EEVKGLG 60
AL+ +S ++ KV + +G++ + ++ + + WP L+ ++ K ++ E +K +G
Sbjct: 243 ALYVFYELSDKTIEEKVNAYIRLGLSVNEVWAVFKKWPFSLKYSE-KNIIQKFETLKRVG 301
Query: 61 FHPSKTLFVVALQAK-RGISKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVN 119
+ VV + G S+ V F G+++D +L +R+P+ + + V
Sbjct: 302 LTKEEVCLVVKKYPECVGTSEEKIVKSVKTFLELGFTKDEVLMIIKRHPQCIGLAADSVK 361
Query: 120 AVMSFWVGHLGWDPSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKDASLYTPFKY 179
F V +GW V+ + P + G+SLEK ++PR +V++ L+S GL+ + ++ +
Sbjct: 362 KKTEFLVKTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLIGEMPAISSVLTS 421
Query: 180 TDKLFLQEFVNCFEE 194
FL+ FV ++
Sbjct: 422 PKLKFLKLFVEKHQD 436
>AT1G62085.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22948757-22950142 REVERSE
LENGTH=461
Length = 461
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 101/199 (50%), Gaps = 7/199 (3%)
Query: 16 MKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLKEVV--EEVKGLGFHPSKTLFVVAL- 72
+++KV + +G + +++ + + PS L ++ K V E +K G L V+
Sbjct: 262 IEAKVNVCKSLGFSVGDVWAMFKKCPSFLNFSENKIVQTWETLKKCGLLEDDVLSVLKKF 321
Query: 73 -QAKRGISKSLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGW 131
Q + + ++ ++ F G+S D + +R P+ ++ S + V F V + W
Sbjct: 322 PQCINASEQKIMNS-IETFLGLGFSRDEVAMIAKRFPQCLILSAETVKKKTEFLVKKMNW 380
Query: 132 DPSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTPFKYTDKLFLQEFVN 190
+ + P++ GYSLEKR +PR +V++ L+S+G + + + + T++ FL +V
Sbjct: 381 PLKAVVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCTNEEFLCRYVK 440
Query: 191 CFEEEE-TSKLLSLYRGGR 208
++++ +L++++ G R
Sbjct: 441 NHDDKKIVPELMAIFTGDR 459
>AT1G62150.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:22970198-22971589 REVERSE
LENGTH=463
Length = 463
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 6/187 (3%)
Query: 27 GVTPSNIYLLLRTWPSLLRCADLK--EVVEEVKGLGFHPSKTLFVVALQ--AKRGISKSL 82
G+T ++++ L + P+ L ++ + + E +K G + L V R + +
Sbjct: 276 GLTVNDVWELFKKCPAFLGYSENRIIQTFEALKRCGLCEDEVLSVFKKNPLCLRASEQQI 335
Query: 83 WDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWDPSVLQAVPSL 142
++ ++ F G+S D + + P+ + YS + V F V + W V+ P +
Sbjct: 336 LNS-METFIGLGFSRDEFVMMVKCLPQCIGYSAEMVKKKTEFVVKKMNWPLKVITLFPQV 394
Query: 143 FGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTPFKYTDKLFLQEFVNCFEEEETSKLL 201
GYS+EKR +PR +V++ L+S+GL+ + + + TD+ FL+ +V +E+ +L+
Sbjct: 395 LGYSMEKRTVPRCNVIKALMSKGLLGSELPPMASVLACTDQTFLKRYVVEHDEKLVLELM 454
Query: 202 SLYRGGR 208
S++ R
Sbjct: 455 SIFNQDR 461
>AT1G56380.2 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101327-21102701 FORWARD
LENGTH=399
Length = 399
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 10 TISLALMKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLK--EVVEEVKGLGFHPSKTL 67
T+S ++ +V + +G +++ + + P+ L ++ K + E +K G + +
Sbjct: 188 TLSNETLEERVNIYKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVI 247
Query: 68 FVVALQAKRGISKSLWD--AKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKV-NAVMSF 124
+ ++ + I S D + K G E+ +L F+R P+ + +S KK+ NAV +F
Sbjct: 248 SMFQ-KSPQCIDFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETF 306
Query: 125 WVGHLGWDPSVLQ-------AVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTP 176
D ++ ++P + +S+EK ++PR +V++ L S+ L+K + +S+++
Sbjct: 307 LGQGFSKDEVMMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSV 366
Query: 177 FKYTDKLFLQEFVNCFEEEE-TSKLLSLY 204
D++FL+ +V+ +++E +L+S++
Sbjct: 367 LICPDEVFLERYVSKHDDQELVDELMSIF 395
>AT1G56380.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:21101374-21102701 FORWARD
LENGTH=388
Length = 388
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 109/209 (52%), Gaps = 15/209 (7%)
Query: 10 TISLALMKSKVQLLLDMGVTPSNIYLLLRTWPSLLRCADLK--EVVEEVKGLGFHPSKTL 67
T+S ++ +V + +G +++ + + P+ L ++ K + E +K G + +
Sbjct: 177 TLSNETLEERVNIYKTLGFDVRDVWEMFKKCPTFLNISEKKITQSFETLKKCGLVEEEVI 236
Query: 68 FVVALQAKRGISKSLWD--AKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKV-NAVMSF 124
+ ++ + I S D + K G E+ +L F+R P+ + +S KK+ NAV +F
Sbjct: 237 SMFQ-KSPQCIDFSELDITQNFEFLKGCGLVEEEVLSMFKRYPQCIGFSEKKILNAVETF 295
Query: 125 WVGHLGWDPSVLQ-------AVPSLFGYSLEKRLMPRASVVQYLLSRGLMKKD-ASLYTP 176
D ++ ++P + +S+EK ++PR +V++ L S+ L+K + +S+++
Sbjct: 296 LGQGFSKDEVMMMVNREGVVSIPVVLEFSMEKMIVPRCNVIKALTSKRLLKTEVSSMFSV 355
Query: 177 FKYTDKLFLQEFVNCFEEEE-TSKLLSLY 204
D++FL+ +V+ +++E +L+S++
Sbjct: 356 LICPDEVFLERYVSKHDDQELVDELMSIF 384
>AT1G74120.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:27871923-27873260 REVERSE
LENGTH=445
Length = 445
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/229 (22%), Positives = 94/229 (41%), Gaps = 42/229 (18%)
Query: 7 GSITISLALMKSKVQLLLDMGVTPSNIYLLLRTWPSLL------RCADL----------- 49
G + ++ ++ K++ L+ +G+ NI +P +L R L
Sbjct: 173 GVLLVNEIEIRRKIEFLVGIGIARDNIERFFHVFPEVLGIGTETRLKPLLDEFMKMGFSK 232
Query: 50 ----KEVVEEVKGLGFH----PSKTLFVVALQAKRGISKSLWDA-----------KVDAF 90
KE+ E + LG P + L+ + I S+ +VD
Sbjct: 233 DDVKKEIAREPRVLGLELGELPRCLELINTLKCREVIRVSIISEGAFRAGFEVKLRVDCL 292
Query: 91 KTWGWSEDAILDAFR---RNPKIMLYSIKKVNAVMSFWVGHLGWDPSVLQAVPSLFGYSL 147
+G DAF+ + P+++LY I+ + + F +G+ + L VP G +L
Sbjct: 293 CKYGLIRR---DAFKVVWKEPRVILYEIEDIEKKIEFLTNRMGFHINCLADVPEYLGVNL 349
Query: 148 EKRLMPRASVVQYLLSRGLMKKDASLYTPFKYTDKLFLQEFVNCFEEEE 196
+K+++PR +V+ YL +G + D L K + K F +V + E E
Sbjct: 350 QKQIVPRYNVIDYLKLKGGLGCDIGLKGLIKPSMKRFYNLYVMPYPECE 398
>AT1G79220.1 | Symbols: | Mitochondrial transcription termination
factor family protein | chr1:29799227-29800426 FORWARD
LENGTH=399
Length = 399
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 98/198 (49%), Gaps = 7/198 (3%)
Query: 16 MKSKVQLLLDMGVTPSNIYLLLRTWPSLL-RCADLKEVVEEVKGLGF-HPSKTLFVVALQ 73
+K ++ +G + ++ +L + P+L+ R E E ++ G SK VA+
Sbjct: 185 IKPAIEYYKGLGFSQQDLVAMLISRPTLIPRTNFNNEKFEYIEKTGVTRESKMFKYVAVI 244
Query: 74 AKRGISK-SLWDAKVDAFKTWGWSEDAILDAFRRNPKIMLYSIKKVNAVMSFWVGHLGWD 132
G+S+ + KV + +G+SE+ I + + P ++ S++KV M+F + +
Sbjct: 245 I--GVSRMETIEEKVRNLEKFGFSEEEIWHLYGKCPILLSLSVEKVQRNMTFVIASMKLP 302
Query: 133 PSVLQAVPSLFGYSLEKRLMPRASVVQYLLSRGL--MKKDASLYTPFKYTDKLFLQEFVN 190
+ P L +LE RL PRA +V+ +L L + K+ S++ + ++K FL+ +V
Sbjct: 303 AHSVVKHPCLLLLNLESRLKPRADLVKRVLEMRLKPLIKEVSIFRAVRMSEKRFLKVYVM 362
Query: 191 CFEEEETSKLLSLYRGGR 208
C ++ ++L+ Y +
Sbjct: 363 CHPQDIATELMEFYEKSK 380