Miyakogusa Predicted Gene

Lj4g3v2348010.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2348010.1 Non Chatacterized Hit- tr|I1KZ45|I1KZ45_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,44.57,0.000000000000008,FBD,FBD,CUFF.50793.1
         (95 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26340.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    50   3e-07
AT5G56570.1 | Symbols:  | Leucine-rich repeat (LRR) family prote...    50   3e-07
AT4G00160.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    47   2e-06
AT5G56440.1 | Symbols:  | F-box/RNI-like/FBD-like domains-contai...    46   4e-06

>AT4G26340.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr4:13324130-13325559
           FORWARD LENGTH=419
          Length = 419

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)

Query: 8   WDFVLAMLKHSPMLQYV-VLSMQIQNGF--YQYPV-WISPCFAPECLSSQLRKCSIINYA 63
           WD + +ML+ SP LQ + ++  Q ++G    + P+ W  P   PECL   L     I Y 
Sbjct: 304 WDLLTSMLQDSPKLQSLKLIDKQHESGLCGIETPIGWKLPSSVPECLLFSLEAFEWIGYK 363

Query: 64  GRESELHFAKYIMQNSKVLRT 84
           GR  +   A Y+++N+  LRT
Sbjct: 364 GRRGDREVATYVLKNAACLRT 384


>AT5G56570.1 | Symbols:  | Leucine-rich repeat (LRR) family protein
           | chr5:22902736-22904404 FORWARD LENGTH=439
          Length = 439

 Score = 50.1 bits (118), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 7   SWDFVLA-MLKHSPMLQYVVLSMQIQNGFYQYPVWISPCFAPECLSSQLRKCSIINYAGR 65
            W  +LA ML  +P L+ + L ++ ++      VW  P   PECLS++L      +Y G 
Sbjct: 328 GWQNLLACMLNDAPNLRSLTLKLRQKSDVNPKKVWEKPTVVPECLSTRLEILKWRDYEGT 387

Query: 66  ESELHFAKYIMQNSKVLRTMTV-------CTLRYSEL 95
           E E     YI+ N+  L+  T        C  R+SEL
Sbjct: 388 EHEKDMVGYILANATFLQRATFSTKDRNQCDSRFSEL 424


>AT4G00160.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr4:63465-65365 FORWARD
           LENGTH=453
          Length = 453

 Score = 47.0 bits (110), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 8   WDFVLAMLKHSPMLQYVVLS---MQIQNGFYQYPVWISPCFAPECLSSQLRKCSIINYA- 63
           WD +  ML+HSP LQ + L+   ++          W  P + PECL S L       +  
Sbjct: 321 WDLLTLMLEHSPKLQVLKLTDNCVKFHKNGLPGGKWNEPKYVPECLLSHLETFVWRRFDW 380

Query: 64  GRESELHFAKYIMQNSKVLRTMTVCT 89
           GRE E   A YI++N++ L   T  T
Sbjct: 381 GREEEKEIATYILKNARRLNKATFST 406


>AT5G56440.1 | Symbols:  | F-box/RNI-like/FBD-like
           domains-containing protein | chr5:22855742-22857117
           REVERSE LENGTH=430
          Length = 430

 Score = 46.2 bits (108), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)

Query: 14  MLKHSPMLQYVVLSMQIQNGFYQY--PV-------------WISPCFAPECLSSQLRKCS 58
           +L H+P L+ V+   Q Q  FYQ   P+             W  P   P+CL S L    
Sbjct: 310 ILNHTPKLR-VLRFEQRQAKFYQLLDPLKRCCSSSVDVQTQWEQPSSVPKCLISSLETVE 368

Query: 59  IINYAGRESELHFAKYIMQNSKVLRTMTVCTLRYSE 94
            I+Y GRE E     Y+++NS+ L+TM + +L+ + 
Sbjct: 369 WIDYKGREVEKKVVMYLLENSRQLKTMAIRSLKSTN 404