Miyakogusa Predicted Gene

Lj4g3v2336850.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2336850.1 Non Chatacterized Hit- tr|I1L0B0|I1L0B0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18295
PE,69.35,2e-19,SNARE-like,Longin-like domain; VAMP-7,NULL; SNARE
PROTEINS,NULL; LONGIN,Longin domain; Longin,Longin,CUFF.50790.1
         (77 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15780.1 | Symbols: ATVAMP724, VAMP724 | vesicle-associated m...   122   4e-29
AT1G04750.1 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B | v...   106   4e-24
AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated m...   105   9e-24
AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated m...   104   1e-23
AT2G33120.1 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-...   103   2e-23
AT2G33120.2 | Symbols: SAR1, VAMP722, ATVAMP722 | synaptobrevin-...   103   2e-23
AT3G54300.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated m...    90   4e-19
AT3G54300.1 | Symbols: ATVAMP727, VAMP727 | vesicle-associated m...    90   4e-19
AT2G33110.1 | Symbols: ATVAMP723, VAMP723 | vesicle-associated m...    89   4e-19

>AT4G15780.1 | Symbols: ATVAMP724, VAMP724 | vesicle-associated
          membrane protein 724 | chr4:8980081-8981697 REVERSE
          LENGTH=222
          Length = 222

 Score =  122 bits (307), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 57/76 (75%), Positives = 66/76 (86%), Gaps = 7/76 (9%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKL-TSSNNKFTYNCDHHTFNFLV 59
          M QESFIYSFVARGTM+LAEYTEFTGNFP+IA+QCLQKL +SSN+KFTYNCDHHTFNFLV
Sbjct: 1  MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLV 60

Query: 60 EDAPISISFYLFCILS 75
          ED       Y +C+++
Sbjct: 61 EDG------YAYCVVA 70


>AT1G04750.1 | Symbols: VAMP7B, VAMP721, ATVAMP721, AT VAMP7B |
          vesicle-associated membrane protein 721 |
          chr1:1331857-1333426 REVERSE LENGTH=219
          Length = 219

 Score =  106 bits (264), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 47/75 (62%), Positives = 61/75 (81%), Gaps = 6/75 (8%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M+Q+S IYSFVARGT++L E+T+F GNF +IA+QCLQKL SSNNKFTYNCD HTFN+LVE
Sbjct: 1  MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60

Query: 61 DAPISISFYLFCILS 75
          D       + +C+++
Sbjct: 61 DG------FTYCVVA 69


>AT2G32670.1 | Symbols: ATVAMP725, VAMP725 | vesicle-associated
           membrane protein 725 | chr2:13857941-13859346 FORWARD
           LENGTH=285
          Length = 285

 Score =  105 bits (261), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 47/75 (62%), Positives = 60/75 (80%), Gaps = 6/75 (8%)

Query: 1   MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
           M Q++ IYSFVARGT++L EYTEF GNF A+A+QCLQKL SSNNKFTYNCD HTFN+LVE
Sbjct: 66  MGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 125

Query: 61  DAPISISFYLFCILS 75
           +       + +C+++
Sbjct: 126 NG------FTYCVVA 134


>AT1G04760.1 | Symbols: ATVAMP726, VAMP726 | vesicle-associated
          membrane protein 726 | chr1:1334760-1336070 FORWARD
          LENGTH=220
          Length = 220

 Score =  104 bits (260), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 54/62 (87%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M Q+S IYSFVARGT++LAEYTEF GNF ++A+QCLQKL SSNNKFTYNCD HTFN+L +
Sbjct: 1  MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLAD 60

Query: 61 DA 62
          + 
Sbjct: 61 NG 62


>AT2G33120.1 | Symbols: SAR1, VAMP722, ATVAMP722 |
          synaptobrevin-related protein 1 |
          chr2:14043785-14045337 REVERSE LENGTH=221
          Length = 221

 Score =  103 bits (258), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 46/75 (61%), Positives = 61/75 (81%), Gaps = 6/75 (8%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M+Q+S IYSFVARGT++L E+T+F GNF +IA+QCLQKL SSNNKFTYNCD HTFN+LVE
Sbjct: 1  MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60

Query: 61 DAPISISFYLFCILS 75
          +       + +C+++
Sbjct: 61 NG------FTYCVVA 69


>AT2G33120.2 | Symbols: SAR1, VAMP722, ATVAMP722 |
          synaptobrevin-related protein 1 |
          chr2:14043785-14045337 REVERSE LENGTH=229
          Length = 229

 Score =  103 bits (257), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 55/62 (88%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M+Q+S IYSFVARGT++L E+T+F GNF +IA+QCLQKL SSNNKFTYNCD HTFN+LVE
Sbjct: 1  MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVE 60

Query: 61 DA 62
          + 
Sbjct: 61 NG 62


>AT3G54300.2 | Symbols: ATVAMP727, VAMP727 | vesicle-associated
          membrane protein 727 | chr3:20108355-20110127 REVERSE
          LENGTH=240
          Length = 240

 Score = 89.7 bits (221), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 53/62 (85%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          MSQ+  IYSFVA+GT+VLAE+T ++GNF  IA QCLQKL ++++K+TY+CD HTFNFLV+
Sbjct: 1  MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60

Query: 61 DA 62
          + 
Sbjct: 61 NG 62


>AT3G54300.1 | Symbols: ATVAMP727, VAMP727 | vesicle-associated
          membrane protein 727 | chr3:20108355-20110127 REVERSE
          LENGTH=240
          Length = 240

 Score = 89.7 bits (221), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/62 (62%), Positives = 53/62 (85%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          MSQ+  IYSFVA+GT+VLAE+T ++GNF  IA QCLQKL ++++K+TY+CD HTFNFLV+
Sbjct: 1  MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVD 60

Query: 61 DA 62
          + 
Sbjct: 61 NG 62


>AT2G33110.1 | Symbols: ATVAMP723, VAMP723 | vesicle-associated
          membrane protein 723 | chr2:14041297-14042892 REVERSE
          LENGTH=217
          Length = 217

 Score = 89.4 bits (220), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 40/76 (52%), Positives = 57/76 (75%), Gaps = 6/76 (7%)

Query: 1  MSQESFIYSFVARGTMVLAEYTEFTGNFPAIASQCLQKLTSSNNKFTYNCDHHTFNFLVE 60
          M+Q+S  YSF+ARGT++L E+T+F GNF ++A+Q L+ L SSNNKFTYNCD HTFN LVE
Sbjct: 1  MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVE 60

Query: 61 DAPISISFYLFCILST 76
          +       + +C+++ 
Sbjct: 61 NG------FTYCVVAV 70