Miyakogusa Predicted Gene

Lj4g3v2314750.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2314750.1 tr|B9HXV1|B9HXV1_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1089189 PE=4
SV=1,45.38,6e-18,seg,NULL,CUFF.50778.1
         (703 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G02510.1 | Symbols: TOC159, TOC86, PPI2, TOC160, ATTOC159 | t...    80   7e-15

>AT4G02510.1 | Symbols: TOC159, TOC86, PPI2, TOC160, ATTOC159 |
           translocon at the outer envelope membrane of
           chloroplasts 159 | chr4:1104766-1109360 FORWARD
           LENGTH=1503
          Length = 1503

 Score = 79.7 bits (195), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 20/146 (13%)

Query: 578 GGGELDGKVTFTYADESSVIFLKDPAYFSSS---------PHYDAQIEFQH--------- 619
           GG    G  T T  D + +  +  PA  SSS         P  +    F +         
Sbjct: 716 GGSSEGGNFTITSQDGTKLFSMDRPAGLSSSLRPLKPAAAPRANRSNIFSNSNVTMADET 775

Query: 620 --NSSEQEGETIQKIQTISVKFLRLLQRVNLSFEDSLVSKVLCRLVADIGRRSHQEFVIS 677
             N SE+E + ++K+Q++ VKFLRLLQR+  S EDS+ ++VL RL    GR++ Q F + 
Sbjct: 776 EINLSEEEKQKLEKLQSLRVKFLRLLQRLGHSAEDSIAAQVLYRLALLAGRQAGQLFSLD 835

Query: 678 SAKISAMMLEEDCQDDLDFSLNILVL 703
           +AK  A+  E +  ++L FSLNILVL
Sbjct: 836 AAKKKAVESEAEGNEELIFSLNILVL 861