Miyakogusa Predicted Gene

Lj4g3v2313720.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2313720.2 Non Chatacterized Hit- tr|I1C2T1|I1C2T1_RHIO9
Uncharacterized protein OS=Rhizopus delemar (strain
RA,34.72,0.000000000002,seg,NULL,CUFF.50775.2
         (325 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G15840.1 | Symbols:  | BTB/POZ domain-containing protein | ch...   363   e-101

>AT4G15840.1 | Symbols:  | BTB/POZ domain-containing protein |
           chr4:8996963-9000852 FORWARD LENGTH=836
          Length = 836

 Score =  363 bits (933), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 198/327 (60%), Positives = 235/327 (71%), Gaps = 23/327 (7%)

Query: 1   MQEHNQNNMPGNVGNIYVAEASTGERNAPSRHVRVHVRGA-IDGLAGLGRGTTFVPASAS 59
            QE+ QNNM G++ N+YV E+S G+     + VR+ VRG  IDGLAG+G   TFVP  A 
Sbjct: 531 CQENVQNNMMGDMDNVYVPESSQGDGIGIFKPVRISVRGQHIDGLAGIGCEATFVPPPAW 590

Query: 60  APTRFVFSRVPFGVGNRSQPQSAANDDSEIRPDLNGDLSGDGLTALVGLSQGGN-TGTNV 118
            PT FV+SRVP    NR+  QS A+D SE R D +G++S DGLTALVGLSQG +  G N 
Sbjct: 591 PPTPFVYSRVPI---NRNGQQSIASDGSEGRIDQSGEISKDGLTALVGLSQGTSGVGNNP 647

Query: 119 HTELTQRGYEMGLQSNMXXXXXXXXXXXXIAMQMLETPEHNIGLEWENANNSSISLDLKT 178
             E T+ G   G                   + M E  E ++G EWENA+  +ISLD KT
Sbjct: 648 RGEQTEGGRGSG-----------------ATVGMSEPKEPSVGTEWENAS-CTISLDTKT 689

Query: 179 PLSHFPPFRFGVCFEDVHRLGDGQVKHSPEVFYAGSLWKVSVQASNDDDRQRPRTLGLFL 238
           PL HFPPFRFGV FEDVHRL +G V+HSPE FYAGSLWK+S+QA ND+D Q  RT+GLFL
Sbjct: 690 PLCHFPPFRFGVEFEDVHRLANGHVEHSPEFFYAGSLWKISIQAFNDEDPQGRRTIGLFL 749

Query: 239 HRRKAEISDIHRKVHMYVDSREKVTARFQLTCPSKREIMVFGSFKQTGTLLPKAPKGWGW 298
           HRRKAEI D  RKVH+Y+D R+KVTAR+QL CPSKRE+M+FGSFKQ GTLLPKAPKGWGW
Sbjct: 750 HRRKAEIVDSVRKVHVYIDPRDKVTARYQLICPSKREVMLFGSFKQRGTLLPKAPKGWGW 809

Query: 299 RSALLFDELADLLQNGVLRVIAVVQLV 325
           R+ALLFDEL++LLQNG LRV AVVQLV
Sbjct: 810 RTALLFDELSELLQNGALRVAAVVQLV 836