Miyakogusa Predicted Gene

Lj4g3v2312410.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2312410.1 Non Chatacterized Hit- tr|K3ZUZ9|K3ZUZ9_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si030430,56.25,0.000000000000001,seg,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; Myb_DNA-bind_4,NULL,CUFF.50754.1
         (138 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G54390.1 | Symbols:  | sequence-specific DNA binding transcri...   137   2e-33
AT3G10030.1 | Symbols:  | aspartate/glutamate/uridylate kinase f...    70   6e-13
AT3G10030.2 | Symbols:  | aspartate/glutamate/uridylate kinase f...    69   9e-13
AT3G14180.1 | Symbols:  | sequence-specific DNA binding transcri...    61   3e-10
AT3G11100.1 | Symbols:  | sequence-specific DNA binding transcri...    59   7e-10
AT5G05550.1 | Symbols:  | sequence-specific DNA binding transcri...    54   2e-08
AT5G05550.2 | Symbols:  | sequence-specific DNA binding transcri...    54   3e-08
AT3G24860.1 | Symbols:  | Homeodomain-like superfamily protein |...    53   6e-08
AT2G44730.1 | Symbols:  | Alcohol dehydrogenase transcription fa...    52   1e-07
AT3G58630.1 | Symbols:  | sequence-specific DNA binding transcri...    50   3e-07
AT1G54060.1 | Symbols: ASIL1 | 6B-interacting protein 1-like 1 |...    46   9e-06

>AT3G54390.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr3:20137912-20138863 REVERSE
           LENGTH=296
          Length = 296

 Score =  137 bits (346), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 65/70 (92%), Positives = 68/70 (97%)

Query: 45  DRLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQC 104
           DRLKRDEWSEGAV TLLEAYE+KWVLRNRAKLKGQDWE+VAKHVSSRA +TKSPKTQTQC
Sbjct: 31  DRLKRDEWSEGAVSTLLEAYESKWVLRNRAKLKGQDWEDVAKHVSSRATHTKSPKTQTQC 90

Query: 105 KNKIESMKKR 114
           KNKIESMKKR
Sbjct: 91  KNKIESMKKR 100


>AT3G10030.1 | Symbols:  | aspartate/glutamate/uridylate kinase
           family protein | chr3:3092277-3094831 REVERSE LENGTH=542
          Length = 542

 Score = 69.7 bits (169), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           R  R+EWS+ A+  LL+AY  K+   NR  L+G+DWEEVA  VS R    K  K+  QCK
Sbjct: 155 RKDREEWSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCE--KLSKSVEQCK 212

Query: 106 NKIESMKKR 114
           NKI+++KKR
Sbjct: 213 NKIDNLKKR 221


>AT3G10030.2 | Symbols:  | aspartate/glutamate/uridylate kinase
           family protein | chr3:3092618-3094831 REVERSE LENGTH=520
          Length = 520

 Score = 68.9 bits (167), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 2/69 (2%)

Query: 46  RLKRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCK 105
           R  R+EWS+ A+  LL+AY  K+   NR  L+G+DWEEVA  VS R    K  K+  QCK
Sbjct: 155 RKDREEWSDAAIACLLDAYSDKFTQLNRGNLRGRDWEEVASSVSERCE--KLSKSVEQCK 212

Query: 106 NKIESMKKR 114
           NKI+++KKR
Sbjct: 213 NKIDNLKKR 221


>AT3G14180.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr3:4707290-4708621 REVERSE
           LENGTH=443
          Length = 443

 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 46/67 (68%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSE A   L++A+  +++  +R  LK + W+EVA+ VSSR +  K PKT  QCKN+
Sbjct: 80  REDCWSEAATAVLIDAWGERYLELSRGNLKQKHWKEVAEIVSSREDYGKIPKTDIQCKNR 139

Query: 108 IESMKKR 114
           I+++KK+
Sbjct: 140 IDTVKKK 146


>AT3G11100.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr3:3476490-3477320 REVERSE
           LENGTH=249
          Length = 249

 Score = 59.3 bits (142), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSE A  TL+EA+  ++V  NR  L+  DW+EVA  V+S   N + PKT  QCKN+
Sbjct: 18  REDWWSEDATATLIEAWGDRYVNLNRGNLRQNDWKEVADAVNSSHGNGR-PKTDVQCKNR 76

Query: 108 IESM 111
           I+++
Sbjct: 77  IDTL 80


>AT5G05550.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr5:1639344-1640550 REVERSE
           LENGTH=246
          Length = 246

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSE A  TL+EA+  ++V  N   L+  DW++VA  V+SR  +    KT  QCKN+
Sbjct: 20  REDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNR 79

Query: 108 IESM 111
           ++++
Sbjct: 80  VDTL 83


>AT5G05550.2 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr5:1639529-1640550 REVERSE
           LENGTH=249
          Length = 249

 Score = 54.3 bits (129), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 40/64 (62%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           + D WSE A  TL+EA+  ++V  N   L+  DW++VA  V+SR  +    KT  QCKN+
Sbjct: 20  REDWWSEEATATLVEAWGNRYVKLNHGNLRQNDWKDVADAVNSRHGDNSRKKTDLQCKNR 79

Query: 108 IESM 111
           ++++
Sbjct: 80  VDTL 83


>AT3G24860.1 | Symbols:  | Homeodomain-like superfamily protein |
           chr3:9073642-9074574 FORWARD LENGTH=310
          Length = 310

 Score = 52.8 bits (125), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 3/63 (4%)

Query: 52  WSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNKIESM 111
           W++     L+E+Y+ KW    R  LK   WEE+A   SSR+      +T TQC++KIE M
Sbjct: 65  WTQDETLLLIESYKEKWFAIGRGPLKSTHWEEIAVAASSRSG---VERTSTQCRHKIEKM 121

Query: 112 KKR 114
           +KR
Sbjct: 122 RKR 124


>AT2G44730.1 | Symbols:  | Alcohol dehydrogenase transcription
           factor Myb/SANT-like family protein |
           chr2:18437447-18438565 REVERSE LENGTH=372
          Length = 372

 Score = 52.0 bits (123), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 35/63 (55%)

Query: 52  WSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNKIESM 111
           WS      L++AY  KW   NR  LK   WEEVA+ V +   +    KT  QC++K+E +
Sbjct: 64  WSLEETIALIDAYRDKWYALNRGNLKANHWEEVAEAVGANCPDVILKKTAVQCRHKMEKL 123

Query: 112 KKR 114
           +KR
Sbjct: 124 RKR 126


>AT3G58630.1 | Symbols:  | sequence-specific DNA binding
           transcription factors | chr3:21683928-21685771 REVERSE
           LENGTH=321
          Length = 321

 Score = 50.4 bits (119), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 9/79 (11%)

Query: 48  KRDEWSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNT---------KSP 98
           + D WSE A  TL++A+  ++V  +R  L+ + W+EVA  V+ R  NT         +  
Sbjct: 22  REDCWSEEATFTLIQAWGNRYVDLSRGNLRQKHWQEVANAVNDRHYNTGRNVSAAKSQPY 81

Query: 99  KTQTQCKNKIESMKKRTCV 117
           +T  QCKN+I+++KK+  V
Sbjct: 82  RTDVQCKNRIDTLKKKYKV 100


>AT1G54060.1 | Symbols: ASIL1 | 6B-interacting protein 1-like 1 |
           chr1:20180972-20182123 FORWARD LENGTH=383
          Length = 383

 Score = 45.8 bits (107), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 49  RDE-WSEGAVCTLLEAYEAKWVLRNRAKLKGQDWEEVAKHVSSRANNTKSPKTQTQCKNK 107
           RD+ WSE A   L+EA+  ++    +  LK Q W+EVA+ V +++   K PKT  QCKN+
Sbjct: 90  RDDCWSEEATKVLIEAWGDRFSEPGKGTLKQQHWKEVAEIV-NKSRQCKYPKTDIQCKNR 148

Query: 108 IESM 111
           I+++
Sbjct: 149 IDTV 152