Miyakogusa Predicted Gene

Lj4g3v2298200.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2298200.1 Non Chatacterized Hit- tr|B9RCW6|B9RCW6_RICCO
Heparanase, putative OS=Ricinus communis
GN=RCOM_16216,42.17,0.00000001,seg,NULL; Glyco_hydro_79n,Glycoside
hydrolase, family 79; HEPARANASE-RELATED,NULL;
HEPARANASE-RELATE,GO034433.path1.1
         (157 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G34940.2 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132...   204   2e-53
AT5G34940.3 | Symbols: AtGUS3, GUS3 | glucuronidase 3 | chr5:132...   188   2e-48
AT5G61250.1 | Symbols: AtGUS1, GUS1 | glucuronidase 1 | chr5:246...   164   3e-41
AT5G61250.2 | Symbols: AtGUS1, GUS1 | glucuronidase 1 | chr5:246...   164   3e-41
AT5G07830.1 | Symbols: AtGUS2, GUS2 | glucuronidase 2 | chr5:250...   157   3e-39

>AT5G34940.2 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
           chr5:13235912-13238718 REVERSE LENGTH=536
          Length = 536

 Score =  204 bits (518), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 88/135 (65%), Positives = 109/135 (80%)

Query: 23  LSEKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNA 82
           + E GTV + G++A+G ID+DF+CATLDWWPPEKCDYG CSW  AS+LNLDLNN I  NA
Sbjct: 27  VEENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLNNVILQNA 86

Query: 83  VKAFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFF 142
           +KAF+PLK+R+GG+LQD V Y T D  +PC PF +  S +FG+T+GCLPM RWDELN FF
Sbjct: 87  IKAFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNAFF 146

Query: 143 AKSGAKIIFGLNALA 157
            K+G K+IFGLNAL+
Sbjct: 147 RKTGTKVIFGLNALS 161


>AT5G34940.3 | Symbols: AtGUS3, GUS3 | glucuronidase 3 |
           chr5:13236566-13238718 REVERSE LENGTH=382
          Length = 382

 Score =  188 bits (477), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 82/137 (59%), Positives = 106/137 (77%)

Query: 21  NTLSEKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFL 80
           + + E GTV + G++A+G ID+DF+CATLDWWPPEKCDYG CSW  AS+LNLDL   + +
Sbjct: 25  SAVEENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSWDHASILNLDLTIVVPI 84

Query: 81  NAVKAFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNK 140
           +   AF+PLK+R+GG+LQD V Y T D  +PC PF +  S +FG+T+GCLPM RWDELN 
Sbjct: 85  SKNTAFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFGYTQGCLPMRRWDELNA 144

Query: 141 FFAKSGAKIIFGLNALA 157
           FF K+G K+IFGLNAL+
Sbjct: 145 FFRKTGTKVIFGLNALS 161


>AT5G61250.1 | Symbols: AtGUS1, GUS1 | glucuronidase 1 |
           chr5:24632294-24634597 REVERSE LENGTH=539
          Length = 539

 Score =  164 bits (414), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 94/132 (71%)

Query: 25  EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
           E+ T+ IDG   I   D++F+CATLDWWPPEKC+Y +C WG ASL+NL+L + +   A++
Sbjct: 25  ERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLLAKAIQ 84

Query: 85  AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
           AF  L++R+GGSLQD+V Y   D   PCT F +    +FGF+EGCL M RWDE+N FF  
Sbjct: 85  AFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLFGFSEGCLYMKRWDEVNHFFNA 144

Query: 145 SGAKIIFGLNAL 156
           +GA + FGLNAL
Sbjct: 145 TGAIVTFGLNAL 156


>AT5G61250.2 | Symbols: AtGUS1, GUS1 | glucuronidase 1 |
           chr5:24632294-24634597 REVERSE LENGTH=539
          Length = 539

 Score =  164 bits (414), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 71/132 (53%), Positives = 94/132 (71%)

Query: 25  EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
           E+ T+ IDG   I   D++F+CATLDWWPPEKC+Y +C WG ASL+NL+L + +   A++
Sbjct: 25  ERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCPWGYASLINLNLASPLLAKAIQ 84

Query: 85  AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
           AF  L++R+GGSLQD+V Y   D   PCT F +    +FGF+EGCL M RWDE+N FF  
Sbjct: 85  AFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLFGFSEGCLYMKRWDEVNHFFNA 144

Query: 145 SGAKIIFGLNAL 156
           +GA + FGLNAL
Sbjct: 145 TGAIVTFGLNAL 156


>AT5G07830.1 | Symbols: AtGUS2, GUS2 | glucuronidase 2 |
           chr5:2504168-2506567 FORWARD LENGTH=543
          Length = 543

 Score =  157 bits (397), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 65/132 (49%), Positives = 92/132 (69%)

Query: 25  EKGTVTIDGKSAIGNIDDDFVCATLDWWPPEKCDYGRCSWGLASLLNLDLNNKIFLNAVK 84
           ++ ++ I G   +   D++FVCATLDWWP +KC+Y +C WG +S++N+DL   +   A+K
Sbjct: 28  KRASIVIQGARRVCETDENFVCATLDWWPHDKCNYDQCPWGYSSVINMDLTRPLLTKAIK 87

Query: 85  AFSPLKLRLGGSLQDKVNYGTEDYHRPCTPFVRKQSEMFGFTEGCLPMNRWDELNKFFAK 144
           AF PL++R+GGSLQD+V Y   +   PC PF +  S +FGF++GCL M RWDELN F   
Sbjct: 88  AFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQKMNSGLFGFSKGCLHMKRWDELNSFLTA 147

Query: 145 SGAKIIFGLNAL 156
           +GA + FGLNAL
Sbjct: 148 TGAVVTFGLNAL 159