Miyakogusa Predicted Gene

Lj4g3v2295970.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2295970.1 tr|Q6J738|Q6J738_MEDTR AML5 OS=Medicago
truncatula GN=MTR_2g049640 PE=2 SV=1,78.84,0,no
description,Nucleotide-binding, alpha-beta plait; RNA recognition
motif,RNA recognition motif
dom,NODE_10188_length_1410_cov_121.843262.path1.1
         (483 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G29400.2 | Symbols: AML5, ML5 | MEI2-like protein 5 | chr1:10...   496   e-140
AT1G29400.1 | Symbols: AML5, ML5 | MEI2-like protein 5 | chr1:10...   496   e-140
AT2G42890.1 | Symbols: AML2, ML2 | MEI2-like 2 | chr2:17850077-1...   413   e-115
AT2G42890.3 | Symbols: AML2, ML2 | MEI2-like 2 | chr2:17850632-1...   412   e-115
AT2G42890.2 | Symbols: AML2, ML2 | MEI2-like 2 | chr2:17850632-1...   412   e-115
AT4G18120.2 | Symbols: AML3, ML3 | MEI2-like 3 | chr4:10038878-1...   395   e-110
AT4G18120.1 | Symbols: AML3, ML3 | MEI2-like 3 | chr4:10038878-1...   395   e-110
AT5G61960.2 | Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24...   224   1e-58
AT5G61960.1 | Symbols: AML1, ML1 | MEI2-like protein 1 | chr5:24...   224   1e-58
AT5G07290.1 | Symbols: AML4, ML4 | MEI2-like 4 | chr5:2294248-22...   207   1e-53
AT3G26120.1 | Symbols: TEL1 | terminal EAR1-like 1 | chr3:954639...   131   8e-31
AT1G67770.1 | Symbols: TEL2 | terminal EAR1-like 2 | chr1:254080...   117   2e-26
AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45...    70   4e-12
AT2G43410.4 | Symbols: FPA | RNA binding | chr2:18026397-1803098...    67   2e-11
AT2G43410.3 | Symbols: FPA | RNA binding | chr2:18026397-1803098...    67   2e-11
AT2G43410.2 | Symbols: FPA | RNA binding | chr2:18026397-1803098...    67   2e-11
AT2G43410.1 | Symbols: FPA | RNA binding | chr2:18026397-1803098...    67   3e-11
AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motif...    67   3e-11
AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2...    64   2e-10
AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 | chr1:2...    64   2e-10
AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 | chr3:5...    59   8e-09
AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/R...    58   2e-08
AT4G00830.4 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    57   3e-08
AT4G00830.3 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    56   4e-08
AT4G00830.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    56   5e-08
AT4G00830.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) famil...    56   5e-08
AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 | chr1:8...    56   6e-08
AT3G61860.1 | Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-bindi...    56   7e-08
AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 | chr1:1...    55   8e-08
AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |...    55   8e-08
AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47...    55   2e-07
AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding pro...    54   2e-07
AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47...    53   4e-07
AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RN...    53   5e-07
AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 | chr1:1...    52   1e-06
AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs...    51   2e-06
AT2G36660.1 | Symbols: PAB7 | poly(A) binding protein 7 | chr2:1...    51   2e-06
AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |...    50   3e-06

>AT1G29400.2 | Symbols: AML5, ML5 | MEI2-like protein 5 |
           chr1:10290393-10293696 REVERSE LENGTH=800
          Length = 800

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/475 (57%), Positives = 335/475 (70%), Gaps = 24/475 (5%)

Query: 18  INVPGKPGRGPWGVLSG-SDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNYQSVDDISS 76
           +++P +   G WG+L G                  PV P  KL L+D  + +  +DD + 
Sbjct: 1   MDIPHEAEAGAWGILPGFGRHHHPSSDATLFSSSLPVFPRGKLQLSDNRDGFSLIDDTA- 59

Query: 77  GFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFF 136
               + +    N+S ++ ++ +IG +LPD EE+LL G+MDD +L +LP    D ++YD F
Sbjct: 60  ----VSRTNKFNESADDFESHSIGNLLPD-EEDLLTGMMDDLDLGELP----DADDYDLF 110

Query: 137 GSGGGMELETDPQETLSV-GMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRT 195
           GSGGGMEL+ D ++ LS+ G   LS S S  GN +P ++IPNG G VAGEHPYGEHPSRT
Sbjct: 111 GSGGGMELDADFRDNLSMSGPPRLSLS-SLGGNAIPQFNIPNGAGTVAGEHPYGEHPSRT 169

Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPL 255
           LFVRNINSNVEDSEL ALFEQYGDIRTLYT CKHRGFVMISYYDIR+AR AMRSLQNKPL
Sbjct: 170 LFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQNKPL 229

Query: 256 RRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 315
           RRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPS+SN+DL  IFGA+GE+KEIRETPHKR
Sbjct: 230 RRRKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKR 289

Query: 316 HHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSF 375
           HHKF+E+YDVR AEAALK+LNR +IAGKRIK+EPSRPGGARR+LM QLNQD + D+    
Sbjct: 290 HHKFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYL 349

Query: 376 RYPVGSPIASSPP--GNW-FNSPVEQNSMPTINHSPGSRIMSPTAGNHLRGLASILQPQV 432
              +GSP+A+SPP  GNW  NSPVE + + ++        +SPT   HL GLAS L  Q 
Sbjct: 350 PM-IGSPMANSPPMQGNWPLNSPVEGSPLQSVLSRSPVFGLSPTRNGHLSGLASALNSQG 408

Query: 433 SNTVKAPTKDIGRNVHGAT-FQ--SHSLPEPKF-SQYHGALPTFGPSTSNGSSIE 483
            ++  AP   IGR   G+  FQ  SH   EPK  ++Y G L   GP  SNG  IE
Sbjct: 409 PSSKLAP---IGRGQIGSNGFQQSSHLFQEPKMDNKYTGNLSPSGPLISNGGGIE 460


>AT1G29400.1 | Symbols: AML5, ML5 | MEI2-like protein 5 |
           chr1:10290393-10293696 REVERSE LENGTH=800
          Length = 800

 Score =  496 bits (1276), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/475 (57%), Positives = 335/475 (70%), Gaps = 24/475 (5%)

Query: 18  INVPGKPGRGPWGVLSG-SDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNYQSVDDISS 76
           +++P +   G WG+L G                  PV P  KL L+D  + +  +DD + 
Sbjct: 1   MDIPHEAEAGAWGILPGFGRHHHPSSDATLFSSSLPVFPRGKLQLSDNRDGFSLIDDTA- 59

Query: 77  GFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFF 136
               + +    N+S ++ ++ +IG +LPD EE+LL G+MDD +L +LP    D ++YD F
Sbjct: 60  ----VSRTNKFNESADDFESHSIGNLLPD-EEDLLTGMMDDLDLGELP----DADDYDLF 110

Query: 137 GSGGGMELETDPQETLSV-GMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRT 195
           GSGGGMEL+ D ++ LS+ G   LS S S  GN +P ++IPNG G VAGEHPYGEHPSRT
Sbjct: 111 GSGGGMELDADFRDNLSMSGPPRLSLS-SLGGNAIPQFNIPNGAGTVAGEHPYGEHPSRT 169

Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPL 255
           LFVRNINSNVEDSEL ALFEQYGDIRTLYT CKHRGFVMISYYDIR+AR AMRSLQNKPL
Sbjct: 170 LFVRNINSNVEDSELTALFEQYGDIRTLYTTCKHRGFVMISYYDIRSARMAMRSLQNKPL 229

Query: 256 RRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKR 315
           RRRKLDIHFSIPKDNPS+KD+NQGTLVVFNLDPS+SN+DL  IFGA+GE+KEIRETPHKR
Sbjct: 230 RRRKLDIHFSIPKDNPSEKDMNQGTLVVFNLDPSISNDDLHGIFGAHGEIKEIRETPHKR 289

Query: 316 HHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSF 375
           HHKF+E+YDVR AEAALK+LNR +IAGKRIK+EPSRPGGARR+LM QLNQD + D+    
Sbjct: 290 HHKFVEFYDVRGAEAALKALNRCEIAGKRIKVEPSRPGGARRSLMLQLNQDLENDDLHYL 349

Query: 376 RYPVGSPIASSPP--GNW-FNSPVEQNSMPTINHSPGSRIMSPTAGNHLRGLASILQPQV 432
              +GSP+A+SPP  GNW  NSPVE + + ++        +SPT   HL GLAS L  Q 
Sbjct: 350 PM-IGSPMANSPPMQGNWPLNSPVEGSPLQSVLSRSPVFGLSPTRNGHLSGLASALNSQG 408

Query: 433 SNTVKAPTKDIGRNVHGAT-FQ--SHSLPEPKF-SQYHGALPTFGPSTSNGSSIE 483
            ++  AP   IGR   G+  FQ  SH   EPK  ++Y G L   GP  SNG  IE
Sbjct: 409 PSSKLAP---IGRGQIGSNGFQQSSHLFQEPKMDNKYTGNLSPSGPLISNGGGIE 460


>AT2G42890.1 | Symbols: AML2, ML2 | MEI2-like 2 |
           chr2:17850077-17854205 FORWARD LENGTH=843
          Length = 843

 Score =  413 bits (1061), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/378 (56%), Positives = 273/378 (72%), Gaps = 2/378 (0%)

Query: 52  PVLPHEKLNLNDTENNYQSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELL 111
           P L HEKLN+ D+++ + S D+ S    KL    +  DSLE+ + DA+  +LP+DE ELL
Sbjct: 57  PTLFHEKLNMTDSDS-WLSFDESSPNLNKLVIGNSEKDSLEDVEPDALEILLPEDENELL 115

Query: 112 AGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLP 171
            G++D+ N + LP  L+DLEE D F +GGGMEL+ + Q+  +V  S +  SD    N   
Sbjct: 116 PGLIDELNFTGLPDELDDLEECDVFCTGGGMELDVESQDNHAVDASGMQISDRGAANAFV 175

Query: 172 NYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRG 231
               PN  G V+ EHP GEHPSRTLFVRNINS+VEDSEL ALFE +G+IR+LYTACK RG
Sbjct: 176 PRKRPNTAGRVSVEHPNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRG 235

Query: 232 FVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVS 291
           FVMISYYDIRAA  AMR+LQN  LR+R LDIHFSIPK+NPS+KD+NQGTLV+FN+D +VS
Sbjct: 236 FVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVS 295

Query: 292 NEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSR 351
           N++L Q+FGAYGE++EIRETP++R H+FIEYYDVR AE ALK+LNRS+I GK IKLE SR
Sbjct: 296 NDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSR 355

Query: 352 PGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNW-FNSPVEQNSMPTINHSPGS 410
           PGGARR  +   +QD ++ E  +F   VGS +A+SPPGNW   SPV+ +         G 
Sbjct: 356 PGGARRLSVPSQSQDLERTEVTNFYNQVGSHVANSPPGNWPIGSPVKGSPSHAFTRPHGL 415

Query: 411 RIMSPTAGNHLRGLASIL 428
            ++ P   +++ GLASIL
Sbjct: 416 GMVRPVNSDNMPGLASIL 433


>AT2G42890.3 | Symbols: AML2, ML2 | MEI2-like 2 |
           chr2:17850632-17854205 FORWARD LENGTH=830
          Length = 830

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/378 (56%), Positives = 273/378 (72%), Gaps = 2/378 (0%)

Query: 52  PVLPHEKLNLNDTENNYQSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELL 111
           P L HEKLN+ D+++ + S D+ S    KL    +  DSLE+ + DA+  +LP+DE ELL
Sbjct: 44  PTLFHEKLNMTDSDS-WLSFDESSPNLNKLVIGNSEKDSLEDVEPDALEILLPEDENELL 102

Query: 112 AGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLP 171
            G++D+ N + LP  L+DLEE D F +GGGMEL+ + Q+  +V  S +  SD    N   
Sbjct: 103 PGLIDELNFTGLPDELDDLEECDVFCTGGGMELDVESQDNHAVDASGMQISDRGAANAFV 162

Query: 172 NYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRG 231
               PN  G V+ EHP GEHPSRTLFVRNINS+VEDSEL ALFE +G+IR+LYTACK RG
Sbjct: 163 PRKRPNTAGRVSVEHPNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRG 222

Query: 232 FVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVS 291
           FVMISYYDIRAA  AMR+LQN  LR+R LDIHFSIPK+NPS+KD+NQGTLV+FN+D +VS
Sbjct: 223 FVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVS 282

Query: 292 NEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSR 351
           N++L Q+FGAYGE++EIRETP++R H+FIEYYDVR AE ALK+LNRS+I GK IKLE SR
Sbjct: 283 NDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSR 342

Query: 352 PGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNW-FNSPVEQNSMPTINHSPGS 410
           PGGARR  +   +QD ++ E  +F   VGS +A+SPPGNW   SPV+ +         G 
Sbjct: 343 PGGARRLSVPSQSQDLERTEVTNFYNQVGSHVANSPPGNWPIGSPVKGSPSHAFTRPHGL 402

Query: 411 RIMSPTAGNHLRGLASIL 428
            ++ P   +++ GLASIL
Sbjct: 403 GMVRPVNSDNMPGLASIL 420


>AT2G42890.2 | Symbols: AML2, ML2 | MEI2-like 2 |
           chr2:17850632-17854205 FORWARD LENGTH=830
          Length = 830

 Score =  412 bits (1060), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 213/378 (56%), Positives = 273/378 (72%), Gaps = 2/378 (0%)

Query: 52  PVLPHEKLNLNDTENNYQSVDDISSGFKKLHQDVAVNDSLENGDNDAIGTMLPDDEEELL 111
           P L HEKLN+ D+++ + S D+ S    KL    +  DSLE+ + DA+  +LP+DE ELL
Sbjct: 44  PTLFHEKLNMTDSDS-WLSFDESSPNLNKLVIGNSEKDSLEDVEPDALEILLPEDENELL 102

Query: 112 AGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLP 171
            G++D+ N + LP  L+DLEE D F +GGGMEL+ + Q+  +V  S +  SD    N   
Sbjct: 103 PGLIDELNFTGLPDELDDLEECDVFCTGGGMELDVESQDNHAVDASGMQISDRGAANAFV 162

Query: 172 NYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRG 231
               PN  G V+ EHP GEHPSRTLFVRNINS+VEDSEL ALFE +G+IR+LYTACK RG
Sbjct: 163 PRKRPNTAGRVSVEHPNGEHPSRTLFVRNINSSVEDSELSALFEPFGEIRSLYTACKSRG 222

Query: 232 FVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVS 291
           FVMISYYDIRAA  AMR+LQN  LR+R LDIHFSIPK+NPS+KD+NQGTLV+FN+D +VS
Sbjct: 223 FVMISYYDIRAAHAAMRALQNTLLRKRTLDIHFSIPKENPSEKDMNQGTLVIFNVDTTVS 282

Query: 292 NEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSR 351
           N++L Q+FGAYGE++EIRETP++R H+FIEYYDVR AE ALK+LNRS+I GK IKLE SR
Sbjct: 283 NDELLQLFGAYGEIREIRETPNRRFHRFIEYYDVRDAETALKALNRSEIGGKCIKLELSR 342

Query: 352 PGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNW-FNSPVEQNSMPTINHSPGS 410
           PGGARR  +   +QD ++ E  +F   VGS +A+SPPGNW   SPV+ +         G 
Sbjct: 343 PGGARRLSVPSQSQDLERTEVTNFYNQVGSHVANSPPGNWPIGSPVKGSPSHAFTRPHGL 402

Query: 411 RIMSPTAGNHLRGLASIL 428
            ++ P   +++ GLASIL
Sbjct: 403 GMVRPVNSDNMPGLASIL 420


>AT4G18120.2 | Symbols: AML3, ML3 | MEI2-like 3 |
           chr4:10038878-10041950 FORWARD LENGTH=730
          Length = 730

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/389 (55%), Positives = 273/389 (70%), Gaps = 34/389 (8%)

Query: 28  PWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNYQSVDDISSGFKKLHQDVAV 87
           P G  S SD               P++ H+ +N  D+   +QSVD+++SG    H    +
Sbjct: 4   PSGTFSRSDHFHASSDASLFSSSLPLIQHQNINPRDSY--HQSVDEMASGLD--HFSGGI 59

Query: 88  NDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETD 147
            + L++GD+  IG MLPDDEEEL +G+MDD NLS LP +L+DLE+YD FGSGGG+ELETD
Sbjct: 60  GNMLDDGDSHPIGNMLPDDEEELFSGLMDDLNLSSLPATLDDLEDYDLFGSGGGLELETD 119

Query: 148 PQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVED 207
           P ++L+ G S + F+DS++ N +P     NGVG +AGEHPYGEHPSRTLFVRNINSNVED
Sbjct: 120 PYDSLNKGFSRMGFADSNVDNVMPQNIFQNGVGSIAGEHPYGEHPSRTLFVRNINSNVED 179

Query: 208 SELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIP 267
           SEL+ALFEQ          C+H                     + K L++RKLDIHFSIP
Sbjct: 180 SELQALFEQL---------CEH--------------------YKAKLLKKRKLDIHFSIP 210

Query: 268 KDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRA 327
           KDNPS+KDVNQGTLVVFNL PSVSN DL  IFG YGE+KEIRETP+KRHHKF+E++DVR+
Sbjct: 211 KDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFVEFFDVRS 270

Query: 328 AEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSP 387
           A+AALK+LNR++IAGKRIKLE SRPGGARRN+M Q+N + +QD++ S+   V SP+ASSP
Sbjct: 271 ADAALKALNRTEIAGKRIKLEHSRPGGARRNMMLQMNPELEQDDSYSYLNHVESPLASSP 330

Query: 388 PGNWFNSPVEQNSMPTINHSPGSRIMSPT 416
            GNW NSP++   + + + SP    +SPT
Sbjct: 331 IGNWRNSPIDH-PLQSFSKSPIFGNLSPT 358


>AT4G18120.1 | Symbols: AML3, ML3 | MEI2-like 3 |
           chr4:10038878-10041950 FORWARD LENGTH=730
          Length = 730

 Score =  395 bits (1014), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 214/389 (55%), Positives = 273/389 (70%), Gaps = 34/389 (8%)

Query: 28  PWGVLSGSDXXXXXXXXXXXXXXXPVLPHEKLNLNDTENNYQSVDDISSGFKKLHQDVAV 87
           P G  S SD               P++ H+ +N  D+   +QSVD+++SG    H    +
Sbjct: 4   PSGTFSRSDHFHASSDASLFSSSLPLIQHQNINPRDSY--HQSVDEMASGLD--HFSGGI 59

Query: 88  NDSLENGDNDAIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETD 147
            + L++GD+  IG MLPDDEEEL +G+MDD NLS LP +L+DLE+YD FGSGGG+ELETD
Sbjct: 60  GNMLDDGDSHPIGNMLPDDEEELFSGLMDDLNLSSLPATLDDLEDYDLFGSGGGLELETD 119

Query: 148 PQETLSVGMSNLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVED 207
           P ++L+ G S + F+DS++ N +P     NGVG +AGEHPYGEHPSRTLFVRNINSNVED
Sbjct: 120 PYDSLNKGFSRMGFADSNVDNVMPQNIFQNGVGSIAGEHPYGEHPSRTLFVRNINSNVED 179

Query: 208 SELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIP 267
           SEL+ALFEQ          C+H                     + K L++RKLDIHFSIP
Sbjct: 180 SELQALFEQL---------CEH--------------------YKAKLLKKRKLDIHFSIP 210

Query: 268 KDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRA 327
           KDNPS+KDVNQGTLVVFNL PSVSN DL  IFG YGE+KEIRETP+KRHHKF+E++DVR+
Sbjct: 211 KDNPSEKDVNQGTLVVFNLAPSVSNRDLENIFGVYGEIKEIRETPNKRHHKFVEFFDVRS 270

Query: 328 AEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSP 387
           A+AALK+LNR++IAGKRIKLE SRPGGARRN+M Q+N + +QD++ S+   V SP+ASSP
Sbjct: 271 ADAALKALNRTEIAGKRIKLEHSRPGGARRNMMLQMNPELEQDDSYSYLNHVESPLASSP 330

Query: 388 PGNWFNSPVEQNSMPTINHSPGSRIMSPT 416
            GNW NSP++   + + + SP    +SPT
Sbjct: 331 IGNWRNSPIDH-PLQSFSKSPIFGNLSPT 358


>AT5G61960.2 | Symbols: AML1, ML1 | MEI2-like protein 1 |
           chr5:24879001-24883483 REVERSE LENGTH=915
          Length = 915

 Score =  224 bits (571), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/392 (40%), Positives = 214/392 (54%), Gaps = 29/392 (7%)

Query: 98  AIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMS 157
            IG +LPD E++L A +  +        + ++L+E+D F S GGMEL+ D          
Sbjct: 140 TIGNLLPD-EDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMELDGD---------- 188

Query: 158 NLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQY 217
              FS  S  NG        G     GE   GE PSRTL V NI+SNVED ELK LFEQ+
Sbjct: 189 --IFSSVSHRNG------ERGGNNSVGELNRGEIPSRTLLVGNISSNVEDYELKVLFEQF 240

Query: 218 GDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVN 277
           GDI+ L+TACK+RGF+M+SY DIRAA+ A R+LQNK LR  KLDI +SI K+NPS KD +
Sbjct: 241 GDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTS 300

Query: 278 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNR 337
           +G L+V NLD S+SN++L ++  +YGEVKEIR T H     +IE++DVRAA AAL  LN 
Sbjct: 301 KGALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNG 360

Query: 338 SDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNWFNSPVE 397
            ++AGK+++L P+ P G R       N         S+       I    PG   ++  +
Sbjct: 361 LEVAGKKLQLVPTYPEGTRYTSQCAANDTEGCLPKTSYSNTSSGHIGRHFPGMISSTSSD 420

Query: 398 QNSMPTINHSPGSRIMSPTAGNHLRGLASILQPQVSNTVKAPTKDIGRNVHGATFQS--- 454
             SM  I++S GS + S     H      I  P  +N + A +K +G   HG  F +   
Sbjct: 421 GGSMRVIHNSIGSPVNSFIE-RHRSLSIPIGFPPSANGISA-SKPVGLQEHGHHFDNSNM 478

Query: 455 --HSLPE---PKFSQYHGALPTFGPSTSNGSS 481
              S+P      FS+Y        P TS+  S
Sbjct: 479 GIQSMPNLHPHSFSEYVDNFANGSPYTSSAFS 510


>AT5G61960.1 | Symbols: AML1, ML1 | MEI2-like protein 1 |
           chr5:24879001-24883483 REVERSE LENGTH=915
          Length = 915

 Score =  224 bits (571), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 159/392 (40%), Positives = 214/392 (54%), Gaps = 29/392 (7%)

Query: 98  AIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMS 157
            IG +LPD E++L A +  +        + ++L+E+D F S GGMEL+ D          
Sbjct: 140 TIGNLLPD-EDDLFAEVTGEVGRKSRANTGDELDEFDLFSSVGGMELDGD---------- 188

Query: 158 NLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQY 217
              FS  S  NG        G     GE   GE PSRTL V NI+SNVED ELK LFEQ+
Sbjct: 189 --IFSSVSHRNG------ERGGNNSVGELNRGEIPSRTLLVGNISSNVEDYELKVLFEQF 240

Query: 218 GDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVN 277
           GDI+ L+TACK+RGF+M+SY DIRAA+ A R+LQNK LR  KLDI +SI K+NPS KD +
Sbjct: 241 GDIQALHTACKNRGFIMVSYCDIRAAQNAARALQNKLLRGTKLDIRYSISKENPSQKDTS 300

Query: 278 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNR 337
           +G L+V NLD S+SN++L ++  +YGEVKEIR T H     +IE++DVRAA AAL  LN 
Sbjct: 301 KGALLVNNLDSSISNQELNRLVKSYGEVKEIRRTMHDNSQIYIEFFDVRAAAAALGGLNG 360

Query: 338 SDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNWFNSPVE 397
            ++AGK+++L P+ P G R       N         S+       I    PG   ++  +
Sbjct: 361 LEVAGKKLQLVPTYPEGTRYTSQCAANDTEGCLPKTSYSNTSSGHIGRHFPGMISSTSSD 420

Query: 398 QNSMPTINHSPGSRIMSPTAGNHLRGLASILQPQVSNTVKAPTKDIGRNVHGATFQS--- 454
             SM  I++S GS + S     H      I  P  +N + A +K +G   HG  F +   
Sbjct: 421 GGSMRVIHNSIGSPVNSFIE-RHRSLSIPIGFPPSANGISA-SKPVGLQEHGHHFDNSNM 478

Query: 455 --HSLPE---PKFSQYHGALPTFGPSTSNGSS 481
              S+P      FS+Y        P TS+  S
Sbjct: 479 GIQSMPNLHPHSFSEYVDNFANGSPYTSSAFS 510


>AT5G07290.1 | Symbols: AML4, ML4 | MEI2-like 4 |
           chr5:2294248-2298491 FORWARD LENGTH=907
          Length = 907

 Score =  207 bits (528), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/258 (45%), Positives = 169/258 (65%), Gaps = 19/258 (7%)

Query: 98  AIGTMLPDDEEELLAGIMDDFNLSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMS 157
            IG +LPD E++L A ++ +          +DL++ D F S GGMEL+ D         S
Sbjct: 133 TIGNLLPD-EDDLFAEVVGEGVHKSRANGGDDLDDCDLFSSVGGMELDGDV-------FS 184

Query: 158 NLSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQY 217
           ++S  D   G+          V  VA EHP GE  SR LFVRN++S++ED EL  LF+Q+
Sbjct: 185 SVSQRDGKRGSN---------VSTVA-EHPQGEILSRILFVRNVDSSIEDCELGVLFKQF 234

Query: 218 GDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVN 277
           GD+R L+TA K+RGF+M+SYYDIRAA+ A R+L  + LR RKLDI +SIPK+NP + + +
Sbjct: 235 GDVRALHTAGKNRGFIMVSYYDIRAAQKAARALHGRLLRGRKLDIRYSIPKENPKE-NSS 293

Query: 278 QGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNR 337
           +G L V NLD S+SNE+L  IF +YGE++E+R T H+    +IE++DVR A+ AL+ LN 
Sbjct: 294 EGALWVNNLDSSISNEELHGIFSSYGEIREVRRTMHENSQVYIEFFDVRKAKVALQGLNG 353

Query: 338 SDIAGKRIKLEPSRPGGA 355
            ++AG+++KL P+ P G 
Sbjct: 354 LEVAGRQLKLAPTCPEGT 371


>AT3G26120.1 | Symbols: TEL1 | terminal EAR1-like 1 |
           chr3:9546398-9549186 FORWARD LENGTH=615
          Length = 615

 Score =  131 bits (330), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 106/187 (56%), Gaps = 22/187 (11%)

Query: 192 PSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQ 251
           P+R+L + ++  +V +S ++   E YGD+R +       G V + +YDIR A+ A+R + 
Sbjct: 104 PTRSLSLISVPRDVTESTVRRDLEVYGDVRGVQMERISEGIVTVHFYDIRDAKRAVREVC 163

Query: 252 NKPLRR----------------------RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPS 289
            + +++                      R +   F +P  +      NQGTLV+FNLDP 
Sbjct: 164 GRHMQQQARGGSVWSSPSTSSARGFVSGRPVWAQFVVPATSAVPGGCNQGTLVIFNLDPE 223

Query: 290 VSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEP 349
           VS+  LRQIF  YG +KE+RETP+K+H +F+E+YDVR A  A   +N  +I GK++ +E 
Sbjct: 224 VSSITLRQIFQVYGPIKELRETPYKKHQRFVEFYDVRDAARAFDRMNGKEIGGKQVVIEF 283

Query: 350 SRPGGAR 356
           SRPGG +
Sbjct: 284 SRPGGIK 290


>AT1G67770.1 | Symbols: TEL2 | terminal EAR1-like 2 |
           chr1:25408043-25410153 FORWARD LENGTH=527
          Length = 527

 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 104/187 (55%), Gaps = 18/187 (9%)

Query: 192 PSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQ 251
           P+R + +  + + V ++ L+   E +G++R +     H G V+  +Y++  ++ A   ++
Sbjct: 78  PTRAVMLLQVPATVTETSLRRDMELFGEVRGVQMERAHEGIVIFHFYNLINSQRAFNEIR 137

Query: 252 NKPLRR------------------RKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNE 293
            + +++                    L  HF  P+ N   +  NQG+LV+ NL+P+VS+ 
Sbjct: 138 YRHMQQQEQQQHFHFTTARGLVSGHSLWAHFVFPQLNAVPEGNNQGSLVIMNLEPTVSSS 197

Query: 294 DLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPG 353
            LR IF  YGEVK++RETP KR  +F+E++DVR A  AL+ +N   I+GK + ++ SRPG
Sbjct: 198 TLRHIFQVYGEVKQVRETPCKREQRFVEFFDVRDAAKALRVMNGKVISGKPMVIQFSRPG 257

Query: 354 GARRNLM 360
           G  + L 
Sbjct: 258 GLTKKLF 264


>AT5G54900.1 | Symbols: ATRBP45A, RBP45A | RNA-binding protein 45A |
           chr5:22295412-22298126 FORWARD LENGTH=387
          Length = 387

 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 88/191 (46%), Gaps = 23/191 (12%)

Query: 183 AGEHPY-GEHPSRTLFVRNINSNVEDSELKALFEQ-YGDIRTLY-----TACKHRGFVMI 235
           AGE  +  E P  T+FV ++   V D  L   F+  YG ++        T  + +G+  +
Sbjct: 142 AGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKVVLDRTTGRSKGYGFV 201

Query: 236 SYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKD---------------NPSDKDVNQGT 280
            + D      AM  +  +    R + I  +  K+               N  D D N  T
Sbjct: 202 RFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGANAGDNDPNNTT 261

Query: 281 LVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDI 340
           + V  LD +V++++L+ IFG +GE+  ++  P KR   F++Y +  +AE AL  LN + +
Sbjct: 262 IFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKR-CGFVQYANKASAEHALSVLNGTQL 320

Query: 341 AGKRIKLEPSR 351
            G+ I+L   R
Sbjct: 321 GGQSIRLSWGR 331


>AT2G43410.4 | Symbols: FPA | RNA binding | chr2:18026397-18030989
           REVERSE LENGTH=901
          Length = 901

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 193 SRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQN 252
           S  L+V ++     +S+L  LF +YGDI  + T    RGF  I Y  +  A  A  +LQ 
Sbjct: 17  SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75

Query: 253 KPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 312
             L   ++ I ++ P   P        +L V  + P+VS +DL + F  +G++++ R   
Sbjct: 76  ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFL- 127

Query: 313 HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
            +R   FI+YY++  A  A KS+N   + G  ++++
Sbjct: 128 RERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVD 162


>AT2G43410.3 | Symbols: FPA | RNA binding | chr2:18026397-18030989
           REVERSE LENGTH=901
          Length = 901

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 193 SRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQN 252
           S  L+V ++     +S+L  LF +YGDI  + T    RGF  I Y  +  A  A  +LQ 
Sbjct: 17  SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75

Query: 253 KPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 312
             L   ++ I ++ P   P        +L V  + P+VS +DL + F  +G++++ R   
Sbjct: 76  ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFL- 127

Query: 313 HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
            +R   FI+YY++  A  A KS+N   + G  ++++
Sbjct: 128 RERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVD 162


>AT2G43410.2 | Symbols: FPA | RNA binding | chr2:18026397-18030989
           REVERSE LENGTH=901
          Length = 901

 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 193 SRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQN 252
           S  L+V ++     +S+L  LF +YGDI  + T    RGF  I Y  +  A  A  +LQ 
Sbjct: 17  SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75

Query: 253 KPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 312
             L   ++ I ++ P   P        +L V  + P+VS +DL + F  +G++++ R   
Sbjct: 76  ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFL- 127

Query: 313 HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
            +R   FI+YY++  A  A KS+N   + G  ++++
Sbjct: 128 RERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVD 162


>AT2G43410.1 | Symbols: FPA | RNA binding | chr2:18026397-18030989
           REVERSE LENGTH=858
          Length = 858

 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 79/156 (50%), Gaps = 10/156 (6%)

Query: 193 SRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQN 252
           S  L+V ++     +S+L  LF +YGDI  + T    RGF  I Y  +  A  A  +LQ 
Sbjct: 17  SNNLWVGSLTPETTESDLTELFGRYGDIDRI-TVYSSRGFAFIYYRHVEEAVAAKEALQG 75

Query: 253 KPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETP 312
             L   ++ I ++ P   P        +L V  + P+VS +DL + F  +G++++ R   
Sbjct: 76  ANLNGSQIKIEYARPA-KPCK------SLWVGGIGPNVSKDDLEEEFSKFGKIEDFRFL- 127

Query: 313 HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
            +R   FI+YY++  A  A KS+N   + G  ++++
Sbjct: 128 RERKTAFIDYYEMDDALQA-KSMNGKPMGGSFLRVD 162


>AT4G27000.1 | Symbols: ATRBP45C | RNA-binding (RRM/RBD/RNP motifs)
           family protein | chr4:13554983-13557763 REVERSE
           LENGTH=415
          Length = 415

 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 89/195 (45%), Gaps = 21/195 (10%)

Query: 177 NGVGIVAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQ-YGDIRTLY-----TACKHR 230
           N   + AGE    E P  T+FV ++  +V D  L   F+  Y  ++        T  + +
Sbjct: 156 NWAQLGAGERRQAEGPEHTVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSK 215

Query: 231 GFVMISYYDIRAARTAMRSL-----QNKPLR------RRKLDIH---FSIPKDNPSDKDV 276
           G+  + + D      AM  +      ++P+R      ++ L +    +   + N  + D 
Sbjct: 216 GYGFVRFADESEQIRAMTEMNGQYCSSRPMRTGPAANKKPLTMQPASYQNTQGNSGESDP 275

Query: 277 NQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLN 336
              T+ V  +D SV+ +DL+ +FG +GE+  ++  P  +   F++Y +   AE AL  LN
Sbjct: 276 TNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVK-IPAGKRCGFVQYANRACAEQALSVLN 334

Query: 337 RSDIAGKRIKLEPSR 351
            + + G+ I+L   R
Sbjct: 335 GTQLGGQSIRLSWGR 349


>AT1G71770.2 | Symbols: PAB5 | poly(A)-binding protein 5 |
           chr1:26990777-26993489 REVERSE LENGTH=682
          Length = 682

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 191 HPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACK---HR--GFVMISYYDIRAART 245
           HP+ +L+V +++ +V +S L  LF Q   +  L   C+   HR  G+  +++ +   A  
Sbjct: 56  HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL-RVCRDLTHRSLGYAYVNFANPEDASR 114

Query: 246 AMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 305
           AM SL   P+R R + I  S    +PS +   +G + + NLD S+ N+ L + F ++G +
Sbjct: 115 AMESLNYAPIRDRPIRIMLS--NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTI 172

Query: 306 KEIR----ETPHKRHHKFIEYYDVRAAEAALKSLN 336
              +         + + F+++     A+AA+  LN
Sbjct: 173 LSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 207



 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 35/236 (14%)

Query: 189 GEHPSRT-LFVRNINSNVEDSELKALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAA 243
           G  PS T ++V+N+   + D ELK  F +YGDI +       +   R F  +++    AA
Sbjct: 233 GAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAA 292

Query: 244 RTAMRSL---------------QNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDP 288
             A+  +               Q K  R  +L   F   + +  +K +    L + NLD 
Sbjct: 293 AVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEK-LQGSNLYLKNLDD 351

Query: 289 SVSNEDLRQIFGAYGEVKEIRETPH----KRHHKFIEYYDVRAAEAALKSLNRSDIAGKR 344
           SV++E L+++F  YG V   +   +     R   F+ Y +   A  A+K +N     GK 
Sbjct: 352 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN-----GKM 406

Query: 345 IKLEPSRPGGARRNLMTQLNQDPDQDETRS--FRYPVGSPIAS---SPPGNWFNSP 395
           I  +P     A+R    Q +      + RS     PV SP++     PPG   + P
Sbjct: 407 IGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGP 462


>AT1G71770.1 | Symbols: PAB5 | poly(A)-binding protein 5 |
           chr1:26990777-26993489 REVERSE LENGTH=682
          Length = 682

 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 191 HPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACK---HR--GFVMISYYDIRAART 245
           HP+ +L+V +++ +V +S L  LF Q   +  L   C+   HR  G+  +++ +   A  
Sbjct: 56  HPNSSLYVGDLDPSVNESHLLDLFNQVAPVHNL-RVCRDLTHRSLGYAYVNFANPEDASR 114

Query: 246 AMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 305
           AM SL   P+R R + I  S    +PS +   +G + + NLD S+ N+ L + F ++G +
Sbjct: 115 AMESLNYAPIRDRPIRIMLS--NRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGTI 172

Query: 306 KEIR----ETPHKRHHKFIEYYDVRAAEAALKSLN 336
              +         + + F+++     A+AA+  LN
Sbjct: 173 LSCKVAMDVVGRSKGYGFVQFEKEETAQAAIDKLN 207



 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 62/236 (26%), Positives = 99/236 (41%), Gaps = 35/236 (14%)

Query: 189 GEHPSRT-LFVRNINSNVEDSELKALFEQYGDIRTLYT----ACKHRGFVMISYYDIRAA 243
           G  PS T ++V+N+   + D ELK  F +YGDI +       +   R F  +++    AA
Sbjct: 233 GAVPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAA 292

Query: 244 RTAMRSL---------------QNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDP 288
             A+  +               Q K  R  +L   F   + +  +K +    L + NLD 
Sbjct: 293 AVAVEKMNGISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEK-LQGSNLYLKNLDD 351

Query: 289 SVSNEDLRQIFGAYGEVKEIRETPH----KRHHKFIEYYDVRAAEAALKSLNRSDIAGKR 344
           SV++E L+++F  YG V   +   +     R   F+ Y +   A  A+K +N     GK 
Sbjct: 352 SVNDEKLKEMFSEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMN-----GKM 406

Query: 345 IKLEPSRPGGARRNLMTQLNQDPDQDETRS--FRYPVGSPIAS---SPPGNWFNSP 395
           I  +P     A+R    Q +      + RS     PV SP++     PPG   + P
Sbjct: 407 IGRKPLYVALAQRKEERQAHLQSLFTQIRSPGTMSPVPSPMSGFHHHPPGGPMSGP 462


>AT3G16380.1 | Symbols: PAB6 | poly(A) binding protein 6 |
           chr3:5558676-5560993 REVERSE LENGTH=537
          Length = 537

 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 80/178 (44%), Gaps = 21/178 (11%)

Query: 189 GEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAAR 244
           G   S  ++V+N+   V D  L  LF QYG + ++        + RGF  +++ +   A+
Sbjct: 197 GNQDSTNVYVKNLIETVTDDCLHTLFSQYGTVSSVVVMRDGMGRSRGFGFVNFCNPENAK 256

Query: 245 TAMRSLQNKPLRRRKLDIHFSIPKDNPSDK-------------DVNQGTLVVFNLDPSVS 291
            AM SL    L  +KL +  ++ KD   +              ++    L V NL  S++
Sbjct: 257 KAMESLCGLQLGSKKLFVGKALKKDERREMLKQKFSDNFIAKPNMRWSNLYVKNLSESMN 316

Query: 292 NEDLRQIFGAYGEVKEIRETPHK----RHHKFIEYYDVRAAEAALKSLNRSDIAGKRI 345
              LR+IFG YG++   +   H+    +   F+ + +   ++ A + LN   + GK I
Sbjct: 317 ETRLREIFGCYGQIVSAKVMCHENGRSKGFGFVCFSNCEESKQAKRYLNGFLVDGKPI 374


>AT1G11650.2 | Symbols: ATRBP45B, RBP45B | RNA-binding (RRM/RBD/RNP
           motifs) family protein | chr1:3914895-3917941 FORWARD
           LENGTH=405
          Length = 405

 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 22/183 (12%)

Query: 190 EHPSRTLFVRNINSNVEDSELKALFE-QYGDIRTLYTAC-----KHRGFVMISYYDIRAA 243
           + P  T+FV ++ ++V D  L   F   Y  ++           + +G+  + + D    
Sbjct: 151 DSPDYTIFVGDLAADVTDYILLETFRASYPSVKGAKVVIDRVTGRTKGYGFVRFSDESEQ 210

Query: 244 RTAMRSLQNKPLRRRKLDIHFSIPKDN---------------PSDKDVNQGTLVVFNLDP 288
             AM  +   P   R + I  +  K                  +D D N  T+ V  LD 
Sbjct: 211 IRAMTEMNGVPCSTRPMRIGPAASKKGVTGQRDSYQSSAAGVTTDNDPNNTTVFVGGLDA 270

Query: 289 SVSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
           SV+++ L+ +F  YGE+  ++  P  +   F+++ +   AE AL+ LN   + G  ++L 
Sbjct: 271 SVTDDHLKNVFSQYGEIVHVK-IPAGKRCGFVQFSEKSCAEEALRMLNGVQLGGTTVRLS 329

Query: 349 PSR 351
             R
Sbjct: 330 WGR 332


>AT4G00830.4 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:352782-354965 FORWARD LENGTH=495
          Length = 495

 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 82/180 (45%), Gaps = 14/180 (7%)

Query: 193 SRTLFVRNINSNVEDSELKALFEQYGD-------IRTLYTACKHRGFVMISYYDIRAART 245
           S  LF+ NI  N  + E + + E  G        I+      ++RGF  + YY+   A  
Sbjct: 195 SNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADY 254

Query: 246 AMRSL--QNKPLRRRKLDIHFSIPKDNP--SDKDVNQGTLVVFNLDPSVSNEDLRQIFGA 301
           + + +   N  L      + ++ PK +P  S        L V N+  + S E L+++F  
Sbjct: 255 SRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQR 314

Query: 302 YGEVKEIRETP---HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
           +GEV +I   P    KR   F+ Y +  +A  A+K   R ++ G+ +++  ++P   R++
Sbjct: 315 HGEVTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKH 374


>AT4G00830.3 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:352842-354965 FORWARD LENGTH=467
          Length = 467

 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 8/170 (4%)

Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSL--QNK 253
           LF+ NI  N  + E + + E  G      T  ++RGF  + YY+   A  + + +   N 
Sbjct: 178 LFIGNIPKNWTEDEFRKVIEDVGPGDPTNT-TRNRGFAFVLYYNNACADYSRQKMIDSNF 236

Query: 254 PLRRRKLDIHFSIPKDNP--SDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIRET 311
            L      + ++ PK +P  S        L V N+  + S E L+++F  +GEV +I   
Sbjct: 237 KLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGEVTKIVTP 296

Query: 312 P---HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
           P    KR   F+ Y +  +A  A+K   R ++ G+ +++  ++P   R++
Sbjct: 297 PGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKH 346


>AT4G00830.2 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:352782-354965 FORWARD LENGTH=495
          Length = 495

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 14/177 (7%)

Query: 196 LFVRNINSNVEDSELKALFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 248
           LF+ NI  N  + E + + E  G        I+      ++RGF  + YY+   A  + +
Sbjct: 198 LFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSRQ 257

Query: 249 SL--QNKPLRRRKLDIHFSIPKDNP--SDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGE 304
            +   N  L      + ++ PK +P  S        L V N+  + S E L+++F  +GE
Sbjct: 258 KMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGE 317

Query: 305 VKEIRETP---HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
           V +I   P    KR   F+ Y +  +A  A+K   R ++ G+ +++  ++P   R++
Sbjct: 318 VTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKH 374


>AT4G00830.1 | Symbols:  | RNA-binding (RRM/RBD/RNP motifs) family
           protein | chr4:352782-354965 FORWARD LENGTH=495
          Length = 495

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 81/177 (45%), Gaps = 14/177 (7%)

Query: 196 LFVRNINSNVEDSELKALFEQYGD-------IRTLYTACKHRGFVMISYYDIRAARTAMR 248
           LF+ NI  N  + E + + E  G        I+      ++RGF  + YY+   A  + +
Sbjct: 198 LFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPTNTTRNRGFAFVLYYNNACADYSRQ 257

Query: 249 SL--QNKPLRRRKLDIHFSIPKDNP--SDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGE 304
            +   N  L      + ++ PK +P  S        L V N+  + S E L+++F  +GE
Sbjct: 258 KMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKALYVKNIPENTSTEQLKELFQRHGE 317

Query: 305 VKEIRETP---HKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRN 358
           V +I   P    KR   F+ Y +  +A  A+K   R ++ G+ +++  ++P   R++
Sbjct: 318 VTKIVTPPGKGGKRDFGFVHYAERSSALKAVKDTERYEVNGQPLEVVLAKPQAERKH 374


>AT1G22760.1 | Symbols: PAB3 | poly(A) binding protein 3 |
           chr1:8055599-8058799 FORWARD LENGTH=660
          Length = 660

 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 78/155 (50%), Gaps = 12/155 (7%)

Query: 191 HPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHR-----GFVMISYYDIRAART 245
           HP+ +L+  +++  V ++ L  LF+   ++ ++   C+ +     G+  I++ +   A  
Sbjct: 46  HPNSSLYAGDLDPKVTEAHLFDLFKHVANVVSV-RVCRDQNRRSLGYAYINFSNPNDAYR 104

Query: 246 AMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEV 305
           AM +L   PL  R + I  S    +PS +   +G + + NLD S+ N+ L + F ++G +
Sbjct: 105 AMEALNYTPLFDRPIRIMLS--NRDPSTRLSGKGNIFIKNLDASIDNKALFETFSSFGTI 162

Query: 306 KEIR----ETPHKRHHKFIEYYDVRAAEAALKSLN 336
              +     T   + + F+++    +A+AA+  LN
Sbjct: 163 LSCKVAMDVTGRSKGYGFVQFEKEESAQAAIDKLN 197


>AT3G61860.1 | Symbols: ATRSP31, RSP31, At-RS31, RS31 | RNA-binding
           (RRM/RBD/RNP motifs) family protein |
           chr3:22900311-22902159 REVERSE LENGTH=264
          Length = 264

 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 16/165 (9%)

Query: 194 RTLFVRNINSNVEDSELKALFEQYGDIRTLYTACKHRGFVMISYYDIRAARTAMRSLQNK 253
           R +FV N       S+L+ LF++YG +  +       G+  + + D R A  A+R L N 
Sbjct: 2   RPVFVGNFEYETRQSDLERLFDKYGRVDRVDMKS---GYAFVYFEDERDAEDAIRKLDNF 58

Query: 254 PL--RRRKLDIHFSIPKDNPSDKDVNQ-------GTLVVFNLDPSVSNE-DLRQIFGAYG 303
           P    +R+L + ++  +      D           TL V N DP  + E D+ + F  YG
Sbjct: 59  PFGYEKRRLSVEWAKGERGRPRGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYG 118

Query: 304 EVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLE 348
           +V  +R    +R+  F+++     A  AL++  RS I  + + +E
Sbjct: 119 KVTNVR---IRRNFSFVQFETQEDATKALEATQRSKILDRVVSVE 160


>AT1G49760.2 | Symbols: PAB8 | poly(A) binding protein 8 |
           chr1:18416740-18419753 FORWARD LENGTH=671
          Length = 671

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 91/193 (47%), Gaps = 20/193 (10%)

Query: 190 EHPSRTLFVRNINSNVEDSELKALFEQYGDIRTL-----YTACKHRGFVMISYYDIRAAR 244
           +  + +L+V ++++ V DS+L   F Q G + ++      T  +  G+  ++Y   + A 
Sbjct: 41  QQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDAS 100

Query: 245 TAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGE 304
            A+  L    L  R + + +S+   +PS +    G + + NLD S+ ++ L + F A+G 
Sbjct: 101 RALNELNFMALNGRAIRVMYSV--RDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGP 158

Query: 305 VKEIRE----TPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLM 360
           +   +     +   + + F++Y    AA+ A+  LN   +  K++ + P          +
Sbjct: 159 ILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGP---------FV 209

Query: 361 TQLNQDPDQDETR 373
            +L +DP  ++ +
Sbjct: 210 HKLQRDPSGEKVK 222


>AT1G49760.1 | Symbols: PAB8, PABP8 | poly(A) binding protein 8 |
           chr1:18416740-18419753 FORWARD LENGTH=671
          Length = 671

 Score = 55.5 bits (132), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 41/193 (21%), Positives = 91/193 (47%), Gaps = 20/193 (10%)

Query: 190 EHPSRTLFVRNINSNVEDSELKALFEQYGDIRTL-----YTACKHRGFVMISYYDIRAAR 244
           +  + +L+V ++++ V DS+L   F Q G + ++      T  +  G+  ++Y   + A 
Sbjct: 41  QQGTTSLYVGDLDATVTDSQLFEAFTQAGQVVSVRVCRDMTTRRSLGYGYVNYATPQDAS 100

Query: 245 TAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGE 304
            A+  L    L  R + + +S+   +PS +    G + + NLD S+ ++ L + F A+G 
Sbjct: 101 RALNELNFMALNGRAIRVMYSV--RDPSLRKSGVGNIFIKNLDKSIDHKALHETFSAFGP 158

Query: 305 VKEIRE----TPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLM 360
           +   +     +   + + F++Y    AA+ A+  LN   +  K++ + P          +
Sbjct: 159 ILSCKVAVDPSGQSKGYGFVQYDTDEAAQGAIDKLNGMLLNDKQVYVGP---------FV 209

Query: 361 TQLNQDPDQDETR 373
            +L +DP  ++ +
Sbjct: 210 HKLQRDPSGEKVK 222


>AT3G19130.1 | Symbols: ATRBP47B, RBP47B | RNA-binding protein 47B |
           chr3:6611398-6613823 REVERSE LENGTH=435
          Length = 435

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 94/223 (42%), Gaps = 39/223 (17%)

Query: 167 GNGLPNYSIP---NGVGIVAGEHPYGEH-PSRTLFVRNINSNVEDSELKALF-EQYGDIR 221
           G+ +PN   P   N      GE    E+ P  ++FV +++ +V D  L   F ++Y  ++
Sbjct: 171 GSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFSDRYPSVK 230

Query: 222 TLYTAC-----KHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPK-------- 268
           +          + +G+  + + D      A+  +       R++ +  + PK        
Sbjct: 231 SAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKRAIANQQQ 290

Query: 269 --------------------DNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI 308
                                + SD +    T+ V  +DP V +EDLRQ F  +GEV  +
Sbjct: 291 HSSQAVILAGGHGSNGSMGYGSQSDGESTNATIFVGGIDPDVIDEDLRQPFSQFGEVVSV 350

Query: 309 RETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSR 351
           +  P  +   F+++ D ++AE A++SLN + I    ++L   R
Sbjct: 351 K-IPVGKGCGFVQFADRKSAEDAIESLNGTVIGKNTVRLSWGR 392


>AT4G34110.1 | Symbols: PAB2, PABP2, ATPAB2 | poly(A) binding
           protein 2 | chr4:16336732-16339892 FORWARD LENGTH=629
          Length = 629

 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/165 (22%), Positives = 83/165 (50%), Gaps = 13/165 (7%)

Query: 195 TLFVRNINSNVEDSELKALFEQYGDIRTLYTACK------HRGFVMISYYDIRAARTAMR 248
           +L+V +++ NV DS+L   F Q G + T+   C+        G+  +++ + + A  A++
Sbjct: 37  SLYVGDLDFNVTDSQLFDAFGQMGTVVTV-RVCRDLVTRRSLGYGYVNFTNPQDAARAIQ 95

Query: 249 SLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEI 308
            L   PL  + + + +S    +PS +    G + + NLD S+ ++ L   F ++G +   
Sbjct: 96  ELNYIPLYGKPIRVMYS--HRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSSFGNIVSC 153

Query: 309 R----ETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEP 349
           +     +   + + F++Y +  +A+ A++ LN   +  K++ + P
Sbjct: 154 KVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDKQVYVGP 198



 Score = 52.0 bits (123), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 31/219 (14%)

Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRSL- 250
           ++V+N+  +  D +LK  F +YG I +         K +GF  +++ +   A  A+ SL 
Sbjct: 217 VYVKNLAESTTDDDLKNAFGEYGKITSAVVMKDGEGKSKGFGFVNFENADDAARAVESLN 276

Query: 251 --------------QNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLR 296
                         Q K  R  +L + +       +DK      L V NLDPS+S+E L+
Sbjct: 277 GHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK-FQSSNLYVKNLDPSISDEKLK 335

Query: 297 QIFGAYGEV--KEIRETPH--KRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 352
           +IF  +G V   ++   P+   +   F+ +     A  A+     S ++GK I+ +P   
Sbjct: 336 EIFSPFGTVTSSKVMRDPNGTSKGSGFVAFATPEEATEAM-----SQLSGKMIESKPLYV 390

Query: 353 GGARR--NLMTQLNQDPDQDETRSFRYPVGSPIASSPPG 389
             A+R  +   +L     Q    + +  VG  +   PPG
Sbjct: 391 AIAQRKEDRRVRLQAQFSQVRPVAMQPSVGPRMPVYPPG 429


>AT1G47490.1 | Symbols: ATRBP47C, RBP47C | RNA-binding protein 47C |
           chr1:17424801-17427182 FORWARD LENGTH=432
          Length = 432

 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 80/182 (43%), Gaps = 23/182 (12%)

Query: 192 PSRTLFVRNINSNVEDSELKALF-EQYGDIRTLYTAC-----KHRGFVMISYYDIRAART 245
           P  ++FV +++ +V D+ L   F E+Y  ++           + +G+  + + D      
Sbjct: 195 PDLSIFVGDLSPDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTK 254

Query: 246 AMRSLQNKPLRRRKLDIHFSIPKDNPS----------------DKDVNQGTLVVFNLDPS 289
           AM  +       R + I  + P+                    + D+   T+ V  LD S
Sbjct: 255 AMTEMNGVKCSSRAMRIGPATPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSS 314

Query: 290 VSNEDLRQIFGAYGEVKEIRETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEP 349
           V++EDL+Q F  +GE+  ++  P  +   F+++ +   AE AL+ LN + I  + ++L  
Sbjct: 315 VTDEDLKQPFNEFGEIVSVK-IPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSW 373

Query: 350 SR 351
            R
Sbjct: 374 GR 375


>AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | 31-kDa RNA
           binding protein | chr4:12766223-12767952 REVERSE
           LENGTH=329
          Length = 329

 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 14/166 (8%)

Query: 196 LFVRNINSNVEDSELKALFEQYGDI---RTLYT--ACKHRGFVMISYYDIRAARTAMRSL 250
           LFV N+  +V    L  LFEQ G +     +Y     + RGF  ++   +  A TA+   
Sbjct: 152 LFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKF 211

Query: 251 QNKPLRRRKLDIHFSIPKDNPSDKD--VNQGTLVVF--NLDPSVSNEDLRQIFGAYGEVK 306
               L  R L ++ + P+ +  ++   V +    V+  NL   V N  L Q+F  +G+V 
Sbjct: 212 NRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVV 271

Query: 307 EI-----RETPHKRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKL 347
           E      RET   R   F+   DV     A+ +L+  ++ G+ I++
Sbjct: 272 EARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 317


>AT1G34140.1 | Symbols: PAB1 | poly(A) binding protein 1 |
           chr1:12433356-12434735 REVERSE LENGTH=407
          Length = 407

 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 79/196 (40%), Gaps = 24/196 (12%)

Query: 196 LFVRNINSNVEDSELKALFEQYGDIRTLYTA----CKHRGFVMISYYDIRAARTAMRSL- 250
           ++V+N+     D++LK LF ++G+I +         K R F  +++    AA TA+  + 
Sbjct: 121 VYVKNLVETATDADLKRLFGEFGEITSAVVMKDGEGKSRRFGFVNFEKAEAAVTAIEKMN 180

Query: 251 --------------QNKPLRRRKLDIHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLR 296
                         Q K  R   L   F + K     K      L V NLD SV N  L 
Sbjct: 181 GVVVDEKELHVGRAQRKTNRTEDLKAKFELEKIIRDMKTRKGMNLYVKNLDDSVDNTKLE 240

Query: 297 QIFGAYGEVKEIRETPH----KRHHKFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRP 352
           ++F  +G +   +   H     +   F+E+     A  A+  +N   +  K I +  ++ 
Sbjct: 241 ELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMNGKMVGNKPIYVSLAQC 300

Query: 353 GGARR-NLMTQLNQDP 367
               + +L TQ N  P
Sbjct: 301 KEQHKLHLQTQFNNPP 316


>AT2G18510.1 | Symbols: emb2444 | RNA-binding (RRM/RBD/RNP motifs)
           family protein | chr2:8031554-8033517 REVERSE LENGTH=363
          Length = 363

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 27/248 (10%)

Query: 175 IPNGVGI-VAGEHPYGEHPSRTLFVRNINSNVEDSELKALFEQYGDIRTLYT-----ACK 228
           I  GVG  + G+H    +   T++V  +++ + +  L  LF Q G +  +Y         
Sbjct: 5   IAPGVGANLLGQHSAERNQDATVYVGGLDAQLSEELLWELFVQAGPVVNVYVPKDRVTNL 64

Query: 229 HRGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIHFSIPKDNPSDKDVNQGT-LVVFNLD 287
           H+ +  I Y     A  A++ L    L  + + ++    K +   K ++ G  L + NLD
Sbjct: 65  HQNYGFIEYRSEEDADYAIKVLNMIKLHGKPIRVN----KASQDKKSLDVGANLFIGNLD 120

Query: 288 PSVSNEDLRQIFGAYGEV----KEIR--ETPHKRHHKFIEYYDVRAAEAALKSLNRSDIA 341
           P V  + L   F A+G +    K +R  +T + R   FI Y    A++AA++S+    ++
Sbjct: 121 PDVDEKLLYDTFSAFGVIASNPKIMRDPDTGNSRGFGFISYDSFEASDAAIESMTGQYLS 180

Query: 342 GKRIKL--------EPSRPGGARRNLMTQLNQDPDQDETRSFRYPVGSPIASSPPGNWFN 393
            ++I +        +  R G     L+   N  P   ++R        P +S+P  N   
Sbjct: 181 NRQITVSYAYKKDTKGERHGTPAERLLAATN--PTAQKSRPHTLFAMGPPSSAPQVNGLP 238

Query: 394 SPVEQNSM 401
            P    SM
Sbjct: 239 RPFANGSM 246


>AT2G36660.1 | Symbols: PAB7 | poly(A) binding protein 7 |
           chr2:15361476-15364398 REVERSE LENGTH=609
          Length = 609

 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 108/234 (46%), Gaps = 13/234 (5%)

Query: 151 TLSVGMSN-LSFSDSSLGNGLPNYSIPNGVGIVAGEHPYGEHPSRT----LFVRNINSNV 205
           +L  G +N LS  D++L     N S+ NG  I            R     +FV+N+  +V
Sbjct: 64  SLCYGYANFLSRQDANLAIEKKNNSLLNGKMIRVMWSVRAPDARRNGVGNVFVKNLPESV 123

Query: 206 EDSELKALFEQYGDIRTLYTAC----KHRGFVMISYYDIRAARTAMRSLQNKPLRRRKLD 261
            ++ L+ +F+++G+I +   A     K RG+  + +    AA  A+++L +  +  +++ 
Sbjct: 124 TNAVLQDMFKKFGNIVSCKVATLEDGKSRGYGFVQFEQEDAAHAAIQTLNSTIVADKEIY 183

Query: 262 IHFSIPKDNPSDKDVNQGTLVVFNLDPSVSNEDLRQIFGAYGEVKEIR----ETPHKRHH 317
           +   + K +    +     L + NLD  VS + LR+ F  +G++  +     E    R +
Sbjct: 184 VGKFMKKTDRVKPEEKYTNLYMKNLDADVSEDLLREKFAEFGKIVSLAIAKDENRLCRGY 243

Query: 318 KFIEYYDVRAAEAALKSLNRSDIAGKRIKLEPSRPGGARRNLMTQLNQDPDQDE 371
            F+ + +   A  A +++N +    K + +  ++    R  L+ +  ++  +++
Sbjct: 244 AFVNFDNPEDARRAAETVNGTKFGSKCLYVGRAQKKAEREQLLREQFKEKHEEQ 297


>AT2G23350.1 | Symbols: PAB4, PABP4 | poly(A) binding protein 4 |
           chr2:9943209-9946041 FORWARD LENGTH=662
          Length = 662

 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 107/246 (43%), Gaps = 38/246 (15%)

Query: 120 LSDLPGSLEDLEEYDFFGSGGGMELETDPQETLSVGMSNLSFSDSSLGNGLPNYSIPNGV 179
           + DL  ++ D + YD+F         T+  + +SV +   + +++SLG G  NYS  +  
Sbjct: 50  VGDLDFNVTDSQLYDYF---------TEVCQVVSVRVCRDAATNTSLGYGYVNYSNTDDA 100

Query: 180 GIVAGEHPYGEHPSRT-------------------LFVRNINSNVEDSELKALFEQYGDI 220
                +  Y     +                    LFV+N++ +V++  L   F   G I
Sbjct: 101 EKAMQKLNYSYLNGKMIRITYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHEAFSGCGTI 160

Query: 221 RTLYTACKH----RGFVMISYYDIRAARTAMRSLQNKPLRRRKLDIH-FSIPKDNPSDKD 275
            +   A  H    RG+  + +    +A+ A+  L  K L  +++ +  F   ++  S  D
Sbjct: 161 VSCKVATDHMGQSRGYGFVQFDTEDSAKNAIEKLNGKVLNDKQIFVGPFLRKEERESAAD 220

Query: 276 VNQGTLV-VFNLDPSVSNEDLRQIFGAYGEVKE---IRETPHK-RHHKFIEYYDVRAAEA 330
             + T V V NL  + ++++L+  FG YG +     +R+   K R   F+ + +   A  
Sbjct: 221 KMKFTNVYVKNLSEATTDDELKTTFGQYGSISSAVVMRDGDGKSRCFGFVNFENPEDAAR 280

Query: 331 ALKSLN 336
           A+++LN
Sbjct: 281 AVEALN 286