Miyakogusa Predicted Gene

Lj4g3v2295890.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2295890.1 Non Chatacterized Hit- tr|I1L257|I1L257_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37462
PE,84.62,0,HIS_KIN,Signal transduction histidine kinase, core; His
Kinase A (phosphoacceptor) domain,Signal
tra,NODE_75972_length_989_cov_8.184024.path1.1
         (273 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-1004...   291   2e-79
AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B | chr2:81...   253   9e-68
AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-91994...   249   2e-66
AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c...   197   8e-51
AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c...   197   9e-51
AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-1401...   150   9e-37

>AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-10045948
            REVERSE LENGTH=1112
          Length = 1112

 Score =  291 bits (746), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 139/257 (54%), Positives = 191/257 (74%), Gaps = 4/257 (1%)

Query: 1    MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
            +I CF FLQI++++    S     E +ES     EL Y+ QE+KNPLNG+RF HKLLE++
Sbjct: 844  VIRCFFFLQIINKE----SGLSCPELKESAQSLNELTYVRQEIKNPLNGIRFAHKLLESS 899

Query: 61   AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
             +S +Q+QFL+TSDACE+QI  IIE++DL+SI EG LQL  EEF L NILD I+SQVM++
Sbjct: 900  EISASQRQFLETSDACEKQITTIIESTDLKSIEEGKLQLETEEFRLENILDTIISQVMII 959

Query: 121  IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
            ++ +N QL  E+ EEIKTL L GD+++LQ++L+D L N+V+H P PN WV I ISPG ++
Sbjct: 960  LRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRNIVNHAPFPNSWVGISISPGQEL 1019

Query: 181  IQDGNEFIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHVQY 240
             +D   +IHL+FRM H G+GLPS +L DMFE  + W T +GLGL +SRK+L +MNG V Y
Sbjct: 1020 SRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKLSRKLLEQMNGRVSY 1079

Query: 241  VREQNKCYFLIDLELRT 257
            VRE  +C+F +DL+++T
Sbjct: 1080 VREDERCFFQVDLQVKT 1096


>AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B |
            chr2:8140079-8144151 FORWARD LENGTH=1172
          Length = 1172

 Score =  253 bits (646), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 128/261 (49%), Positives = 181/261 (69%), Gaps = 2/261 (0%)

Query: 1    MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
            +IG FCFLQI S +  Q     R +  E   ++KELAYI Q +KNPL+G+RF + LLE T
Sbjct: 897  VIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKNPLSGMRFANSLLEAT 956

Query: 61   AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
             ++E+QKQ L+TS +CE+QI  I+ + DLESI +G+  L  EEF LG++++AIVSQ M L
Sbjct: 957  DLNEDQKQLLETSVSCEKQISRIVGDMDLESIEDGSFVLKREEFFLGSVINAIVSQAMFL 1016

Query: 121  IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
            ++ + LQL  +IPEEIK++ ++GDQIR+Q +L++FLL+++ + PS   WVEI +S   K 
Sbjct: 1017 LRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLLAEFLLSIIRYAPSQE-WVEIHLSQLSKQ 1075

Query: 181  IQDGNEFIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHVQY 240
            + DG   I  +FRM   G+GLP  ++ DMF   ++WT+ EGLGL + RKIL  MNG VQY
Sbjct: 1076 MADGFAAIRTEFRMACPGEGLPPELVRDMFH-SSRWTSPEGLGLSVCRKILKLMNGEVQY 1134

Query: 241  VREQNKCYFLIDLELRTRKER 261
            +RE  + YFLI LEL   ++R
Sbjct: 1135 IRESERSYFLIILELPVPRKR 1155


>AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-9199486
            REVERSE LENGTH=1164
          Length = 1164

 Score =  249 bits (635), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 124/255 (48%), Positives = 179/255 (70%), Gaps = 2/255 (0%)

Query: 1    MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
            +IG FCFLQI S +  Q  +  R +  E     KELAYI Q +KNPL+GLRFT+ LLE+ 
Sbjct: 901  IIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNSLLEDM 960

Query: 61   AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
             ++E+QKQ L+TS +CE+QI  I+ + D++SI++G+  L   EF +GN+ +A+VSQVM++
Sbjct: 961  DLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVSQVMLV 1020

Query: 121  IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
            ++ +NLQL   IP E+K++A+YGDQIRLQ VL++FLL++V + P   G VE+ + P L  
Sbjct: 1021 VRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAPM-EGSVELHLCPTLNQ 1079

Query: 181  IQDGNEFIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHVQY 240
            + DG   + L+FRM  +G+G+P   + DMF   ++WT+ EGLGL + RKIL  MNG VQY
Sbjct: 1080 MADGFSAVRLEFRMACAGEGVPPEKVQDMFH-SSRWTSPEGLGLSVCRKILKLMNGGVQY 1138

Query: 241  VREQNKCYFLIDLEL 255
            +RE  + YFLI +EL
Sbjct: 1139 IREFERSYFLIVIEL 1153


>AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
            chr1:3095498-3099216 REVERSE LENGTH=1122
          Length = 1122

 Score =  197 bits (500), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 108/257 (42%), Positives = 162/257 (63%), Gaps = 6/257 (2%)

Query: 1    MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
            + G FCFLQ+ S +  Q     R   R ++   K LAYI ++++NPL+G+ FT K++E T
Sbjct: 865  VTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGT 924

Query: 61   AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
             +   Q++ L TS  C++Q+  I+++SDLESI EG L L M+EF L  +L A  SQVMM 
Sbjct: 925  ELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMK 984

Query: 121  IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
              GK++++ +E  EE+ +  LYGD IRLQ VL+DF+L  V+ TPS     ++ +S  L+ 
Sbjct: 985  SNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFMLMAVNFTPSGG---QLTVSASLRK 1041

Query: 181  IQDGNE--FIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHV 238
             Q G      +L+ R+TH+G G+P  +L+ MF G  +  ++EGL L +SRK++  MNG V
Sbjct: 1042 DQLGRSVHLANLEIRLTHTGAGIPEFLLNQMF-GTEEDVSEEGLSLMVSRKLVKLMNGDV 1100

Query: 239  QYVREQNKCYFLIDLEL 255
            QY+R+  K  F+I  EL
Sbjct: 1101 QYLRQAGKSSFIITAEL 1117


>AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
            chr1:3095498-3098892 REVERSE LENGTH=1014
          Length = 1014

 Score =  197 bits (500), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 108/257 (42%), Positives = 162/257 (63%), Gaps = 6/257 (2%)

Query: 1    MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
            + G FCFLQ+ S +  Q     R   R ++   K LAYI ++++NPL+G+ FT K++E T
Sbjct: 757  VTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMFTRKMIEGT 816

Query: 61   AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
             +   Q++ L TS  C++Q+  I+++SDLESI EG L L M+EF L  +L A  SQVMM 
Sbjct: 817  ELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCLDLEMKEFTLNEVLTASTSQVMMK 876

Query: 121  IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNGWVEIKISPGLKI 180
              GK++++ +E  EE+ +  LYGD IRLQ VL+DF+L  V+ TPS     ++ +S  L+ 
Sbjct: 877  SNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFMLMAVNFTPSGG---QLTVSASLRK 933

Query: 181  IQDGNE--FIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRMNGHV 238
             Q G      +L+ R+TH+G G+P  +L+ MF G  +  ++EGL L +SRK++  MNG V
Sbjct: 934  DQLGRSVHLANLEIRLTHTGAGIPEFLLNQMF-GTEEDVSEEGLSLMVSRKLVKLMNGDV 992

Query: 239  QYVREQNKCYFLIDLEL 255
            QY+R+  K  F+I  EL
Sbjct: 993  QYLRQAGKSSFIITAEL 1009


>AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-14011619
            FORWARD LENGTH=1111
          Length = 1111

 Score =  150 bits (379), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 146/253 (57%), Gaps = 2/253 (0%)

Query: 1    MIGCFCFLQIVSRDPSQPSDGHRSEGRESIYESKELAYILQEMKNPLNGLRFTHKLLENT 60
            + G  CFLQ+ S +        +           +LAY+  E+K+P   + F   LL ++
Sbjct: 852  VTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSS 911

Query: 61   AVSENQKQFLDTSDACERQIMAIIENSDLESINEGTLQLNMEEFLLGNILDAIVSQVMML 120
             +SE+QK+ L TS  C  Q+  +I +SD+E I EG ++L+  EF L   L+A+V QVM L
Sbjct: 912  GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQESLEAVVKQVMEL 971

Query: 121  IKGKNLQLFHEIPEEIKTLALYGDQIRLQVVLSDFLLNVVSHTPSPNG-WVEIKISPGLK 179
               + +Q+  + P+E+ ++ LYGD +RLQ +LS+ LL+ +  TP+  G  V  K+   ++
Sbjct: 972  SIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGLCVSFKVIARIE 1031

Query: 180  IIQDGNEFIHLKFRMTHSGQGLPSAVLHDMFEGGNQWTTQEGLGLYMSRKILSRM-NGHV 238
             I    + + L+FR+ H   GLP  ++ +MF+   + T++EGLGL++++K++  M  G +
Sbjct: 1032 AIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1091

Query: 239  QYVREQNKCYFLI 251
            +Y+RE     F+I
Sbjct: 1092 RYLRESEMSAFVI 1104