Miyakogusa Predicted Gene
- Lj4g3v2295880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2295880.1 Non Chatacterized Hit- tr|I1L257|I1L257_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37462
PE,84.88,0,PHY,Phytochrome, central region; PAS,PAS fold; PAS_2,PAS
fold-2; GAF,GAF domain; Domain present in
p,NODE_37971_length_2753_cov_7.908827.path2.1
(864 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-1004... 1171 0.0
AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B | chr2:81... 1145 0.0
AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-91994... 1123 0.0
AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 932 0.0
AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-1401... 908 0.0
AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 869 0.0
>AT4G18130.1 | Symbols: PHYE | phytochrome E |
chr4:10042312-10045948 REVERSE LENGTH=1112
Length = 1112
Score = 1171 bits (3029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/863 (64%), Positives = 680/863 (78%), Gaps = 24/863 (2%)
Query: 12 SSFTSNMNTATTSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTVLDSPRLVSEEKM 71
SS SNM + AQ+S DA A+F QS + KSF+YSK+V+ P V +E +
Sbjct: 7 SSAASNMKPQPQKSNT---AQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHI 63
Query: 72 TAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGL-----ERHIDSKQQLLGL 126
TAYLS IQRGGL+Q FGC++A+ E +F I+G S+N LGL H ++ GL
Sbjct: 64 TAYLSNIQRGGLVQPFGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKVKGL 123
Query: 127 IGVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEP 186
IG+DA TLFTP SGASL+KA S EISLLNP+ V++RTTQKPFYAILHRID G+V+DLEP
Sbjct: 124 IGIDARTLFTPSSGASLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMDLEP 183
Query: 187 ARSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKF 246
A+S DPAL+LAG VQSQKLA+RA SRLQS PG D G LCD VVE+VQ+ TGYDRVMVY+F
Sbjct: 184 AKSGDPALTLAGAVQSQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQF 243
Query: 247 HEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSE 306
HEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDC A VKV+QSE
Sbjct: 244 HEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSE 303
Query: 307 DLMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGNDTTRLWGLLVCHHTSPRY 366
+L +PL LVNSTLRAP GCH+QYMANMGS+ASL +A++V G D+++LWGL+V HH SPRY
Sbjct: 304 ELKRPLCLVNSTLRAPHGCHTQYMANMGSVASLALAIVVKGKDSSKLWGLVVGHHCSPRY 363
Query: 367 VPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLRDAPFGIVTQSPS 426
VPFP+RYACEFLMQAFGLQL ME+QLA+Q+AEK+ ++TQTLLCDMLLRD IVTQSP
Sbjct: 364 VPFPLRYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPG 423
Query: 427 IMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHG-DSTGLSTNSLAEAGYPG 485
IMDLVKCDGAALYY GKCWL+G TP ESQVKD+ WL+ NHG DSTGL+T+SL +AGYPG
Sbjct: 424 IMDLVKCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPG 483
Query: 486 ATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGKMNPRSSFKAF 545
A SLGD VCG+A A +S+ +L WFRS+TA +KWGGAKHHP+DKDD G+M+PRSSF AF
Sbjct: 484 AISLGDAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSFTAF 543
Query: 546 LEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIGTAIERKG-ELSS 604
LE+ K +SLPWE+SEI+AIHSL+LIMR+SF ++ P G + R EL+S
Sbjct: 544 LEVAKSRSLPWEISEIDAIHSLRLIMRESFTSSR---PVL------SGNGVARDANELTS 594
Query: 605 VACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLVNEVVHADSRET 664
CEMVR+IETAT PIFGVDS G INGWN +T+E+TGL ASEA+GKSL +E+V +SR
Sbjct: 595 FVCEMVRVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAA 654
Query: 665 LTNVLSRALQGEEEKNVELKIKHFG----IDQKKVVYLRANACTSRDYTNAIVGVCFVGQ 720
L ++L +ALQGEEEK+V LK++ FG D V + N+CTSRDYT I+GVCFVGQ
Sbjct: 655 LESLLCKALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQ 714
Query: 721 DITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWKREEV 780
DIT EK + D+FI+L+GDYK I+QSLNPLIPPIFASDENACCSEWNAAMEKLTGW + EV
Sbjct: 715 DITSEKAITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEV 774
Query: 781 IGKLLPGEIFGNFCQLKGQDTLTNFMILLYRGLSGQD-SEKLPFGFFDRNGKFVEVYITA 839
IGK+LPGE+FG FC++K QD+LT F+I LY+G++G + E FF++ GK++E +TA
Sbjct: 775 IGKMLPGEVFGVFCKVKCQDSLTKFLISLYQGIAGDNVPESSLVEFFNKEGKYIEASLTA 834
Query: 840 SKRNDAAGNMIGCFCFLQIVSRD 862
+K + G +I CF FLQI++++
Sbjct: 835 NKSTNIEGKVIRCFFFLQIINKE 857
>AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B |
chr2:8140079-8144151 FORWARD LENGTH=1172
Length = 1172
Score = 1145 bits (2961), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 550/876 (62%), Positives = 677/876 (77%), Gaps = 23/876 (2%)
Query: 7 GNLKDSSFTSNMNT-ATTSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTVLDSP-- 63
G SS T ++ + T + KA+ Q++ DA A FEQSG S KSFDYS+++ +
Sbjct: 34 GEQAQSSGTKSLRPRSNTESMSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTYG 93
Query: 64 RLVSEEKMTAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERH---IDSK 120
V E+++TAYLS+IQRGG IQ FGCM+A+ ES+F IIGYSEN ++LG+ K
Sbjct: 94 SSVPEQQITAYLSRIQRGGYIQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLEK 153
Query: 121 QQLLGLIGVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGV 180
++L + G D +LFT S L +A +REI+LLNP+W++++ T KPFYAILHRIDVGV
Sbjct: 154 PEILAM-GTDVRSLFTSSSSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGV 212
Query: 181 VIDLEPARSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDR 240
VIDLEPAR+ DPALS+AG VQSQKLA+RA S+LQ+ PG D LLCD VVE V+ TGYDR
Sbjct: 213 VIDLEPARTEDPALSIAGAVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDR 272
Query: 241 VMVYKFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAV 300
VMVYKFHED+HGEVV+E +R DLEPY+GLHYPATDIPQA+RFLFKQNRVRMI DC A V
Sbjct: 273 VMVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPV 332
Query: 301 KVIQSEDLMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGND----------- 349
V+Q + L Q + LV STLRAP GCHSQYMANMGSIASL MAVI+NGN+
Sbjct: 333 LVVQDDRLTQSMCLVGSTLRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRS 392
Query: 350 TTRLWGLLVCHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLC 409
+ RLWGL+VCHHTS R +PFP+RYACEFLMQAFGLQL ME+QLA QM+EKR+L+TQTLLC
Sbjct: 393 SMRLWGLVVCHHTSSRCIPFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLC 452
Query: 410 DMLLRDAPFGIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGD 469
DMLLRD+P GIVTQSPSIMDLVKCDGAA Y GK + LG P+E Q+KD+ EWLL NH D
Sbjct: 453 DMLLRDSPAGIVTQSPSIMDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHAD 512
Query: 470 STGLSTNSLAEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPED 529
STGLST+SL +AGYPGA +LGD VCGMA A I R FLFWFRSHTAKE+KWGGAKHHPED
Sbjct: 513 STGLSTDSLGDAGYPGAAALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPED 572
Query: 530 KDDGGKMNPRSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTL--N 587
KDDG +M+PRSSF+AFLE+VK +S PWE +E++AIHSLQLI+RDSF++++ + +
Sbjct: 573 KDDGQRMHPRSSFQAFLEVVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVDG 632
Query: 588 FIQKIGTAIERKG--ELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQAS 645
+Q +G EL +VA EMVRLIETATVPIF VD+ G INGWN + +ELTGL
Sbjct: 633 VVQPCRDMAGEQGIDELGAVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVE 692
Query: 646 EAIGKSLVNEVVHADSRETLTNVLSRALQGEEEKNVELKIKHFGID-QKKVVYLRANACT 704
EA+GKSLV+++++ ++ T+ +LSRAL+G+EEKNVE+K+K F + Q K V++ NAC+
Sbjct: 693 EAMGKSLVSDLIYKENEATVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACS 752
Query: 705 SRDYTNAIVGVCFVGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSE 764
S+DY N IVGVCFVGQD+T +K+V+DKFI ++GDYKAI+ S NPLIPPIFA+DEN CC E
Sbjct: 753 SKDYLNNIVGVCFVGQDVTSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLE 812
Query: 765 WNAAMEKLTGWKREEVIGKLLPGEIFGNFCQLKGQDTLTNFMILLYRGLSGQDSEKLPFG 824
WN AMEKLTGW R EVIGK++ GE+FG+ C LKG D LT FMI+L+ + GQD++K PF
Sbjct: 813 WNMAMEKLTGWSRSEVIGKMIVGEVFGSCCMLKGPDALTKFMIVLHNAIGGQDTDKFPFP 872
Query: 825 FFDRNGKFVEVYITASKRNDAAGNMIGCFCFLQIVS 860
FFDRNGKFV+ +TA+KR G +IG FCFLQI S
Sbjct: 873 FFDRNGKFVQALLTANKRVSLEGKVIGAFCFLQIPS 908
>AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-9199486
REVERSE LENGTH=1164
Length = 1164
Score = 1123 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/861 (62%), Positives = 666/861 (77%), Gaps = 24/861 (2%)
Query: 23 TSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTVLDSP--RLVSEEKMTAYLSKIQR 80
T + +KA+ Q++ DA A FEQSG S KSFDYS+++ +P V E+++TAYLS+IQR
Sbjct: 53 TESTNKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQR 112
Query: 81 GGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERH----IDSKQQLLGLIGVDATTLFT 136
GG Q FGC++A+ ESTFTIIGYSEN ++LGL I+ K ++L IG D +LF
Sbjct: 113 GGYTQPFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEVL-TIGTDLRSLFK 171
Query: 137 PPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEPARSSDPALSL 196
S L +A +REI+LLNPIW+++ T KPFYAILHR+DVG++IDLEPAR+ DPALS+
Sbjct: 172 SSSYLLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSI 231
Query: 197 AGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKFHEDDHGEVVS 256
AG VQSQKLA+RA S LQS P D LLCD VVE V+ TGYDRVMVYKFHED+HGEVV+
Sbjct: 232 AGAVQSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVA 291
Query: 257 EIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSEDLMQPLYLVN 316
E +R+DLEPY+GLHYPATDIPQA+RFLFKQNRVRMI DC A+ V+V+Q + L Q + LV
Sbjct: 292 ESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVG 351
Query: 317 STLRAPQGCHSQYMANMGSIASLVMAVIVNGND------------TTRLWGLLVCHHTSP 364
STLRAP GCH+QYM NMGSIASL MAVI+NGN+ + RLWGL+VCHHTS
Sbjct: 352 STLRAPHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSA 411
Query: 365 RYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLRDAPFGIVTQS 424
R +PFP+RYACEFLMQAFGLQL ME+QLA Q++EKR+L+ QTLLCDMLLRD+P GIVTQ
Sbjct: 412 RCIPFPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQR 471
Query: 425 PSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLSTNSLAEAGYP 484
PSIMDLVKC+GAA Y GK + LG TPT+SQ+ DI EWL+ NH DSTGLST+SL +AGYP
Sbjct: 472 PSIMDLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYP 531
Query: 485 GATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGKMNPRSSFKA 544
A +LGD VCGMA A I R FLFWFRSHT KE+KWGGAKHHPEDKDDG +MNPRSSF+
Sbjct: 532 RAAALGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQT 591
Query: 545 FLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQ--NFGPTTLNFIQKIGTAIERKG-- 600
FLE+VK + PWE +E++AIHSLQLI+RDSF++++ + +Q G + ++G
Sbjct: 592 FLEVVKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQ 651
Query: 601 ELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLVNEVVHAD 660
E+ +VA EMVRLIETATVPIF VD DG INGWN + +ELTGL +A+GKSLV E+++ +
Sbjct: 652 EIGAVAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKE 711
Query: 661 SRETLTNVLSRALQGEEEKNVELKIKHFGID-QKKVVYLRANACTSRDYTNAIVGVCFVG 719
+ET+ +LS AL+G+E KNVE+K+K FG + Q K +++ NAC+S+DY N IVGVCFVG
Sbjct: 712 YKETVDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVG 771
Query: 720 QDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWKREE 779
QD+T K+V+DKFI ++GDYKAII S NPLIPPIFA+DEN CC EWN AMEKLTGW R E
Sbjct: 772 QDVTGHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSE 831
Query: 780 VIGKLLPGEIFGNFCQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRNGKFVEVYITA 839
VIGKLL E+FG++C+LKG D LT FMI+L+ + GQD++K PF FFDR G+F++ +T
Sbjct: 832 VIGKLLVREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTL 891
Query: 840 SKRNDAAGNMIGCFCFLQIVS 860
+KR G +IG FCFLQI S
Sbjct: 892 NKRVSIDGKIIGAFCFLQIPS 912
>AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3099216 REVERSE LENGTH=1122
Length = 1122
Score = 932 bits (2410), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/863 (54%), Positives = 602/863 (69%), Gaps = 33/863 (3%)
Query: 28 KALAQFSADAENLAEFEQSGASDKSFDYSKTVLDSPRLV------SEEKMTAYLSKIQRG 81
+ +AQ + DA+ A+FE+SG+S FDYS +V + +V S++ T YL IQ+G
Sbjct: 21 RIIAQTTVDAKLHADFEESGSS---FDYSTSVRVTGPVVENQPPRSDKVTTTYLHHIQKG 77
Query: 82 GLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERHID---SKQQLLGLIGVDATTLFTPP 138
LIQ FGC+LA+ E TF +I YSEN +LL + H + +LG IG D +LFT P
Sbjct: 78 KLIQPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHPVLG-IGTDIRSLFTAP 136
Query: 139 SGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEPARSSDPALSLAG 198
S ++L KA+ ++SLLNPI V+ RT+ KPFYAI+HR+ ++ID EP + + ++ AG
Sbjct: 137 SASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIIDFEPVKPYEVPMTAAG 196
Query: 199 TVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKFHEDDHGEVVSEI 258
+QS KLA +A +RLQS P LCD +V+EV + TGYDRVM YKFHEDDHGEVVSE+
Sbjct: 197 ALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVVSEV 256
Query: 259 RRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSEDLMQPLYLVNST 318
+ LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A +V+Q E L L L ST
Sbjct: 257 TKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQDEKLSFDLTLCGST 316
Query: 319 LRAPQGCHSQYMANMGSIASLVMAVIVNGND--------TT------RLWGLLVCHHTSP 364
LRAP CH QYMANM SIASLVMAV+VN D TT RLWGL+VCH+T+P
Sbjct: 317 LRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQKRKRLWGLVVCHNTTP 376
Query: 365 RYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLRDAPFGIVTQS 424
R+VPFP+RYACEFL Q F + + E++L QM EK IL+TQTLLCDML+RDAP GIV+QS
Sbjct: 377 RFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLCDMLMRDAPLGIVSQS 436
Query: 425 PSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLSTNSLAEAGYP 484
P+IMDLVKCDGAAL Y K W LGTTP+E +++IA WL H DSTGLST+SL +AG+P
Sbjct: 437 PNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDSTGLSTDSLHDAGFP 496
Query: 485 GATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGKMNPRSSFKA 544
A SLGD VCGMA RI+S+ +FWFRSHTA E++WGGAKH P+D+DD +M+PRSSFKA
Sbjct: 497 RALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDDARRMHPRSSFKA 556
Query: 545 FLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIGT-AIERKGELS 603
FLE+VK +SLPW+ E++AIHSLQLI+R++F+D++ T K+ I+ EL
Sbjct: 557 FLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYSKLNDLKIDGIQELE 616
Query: 604 SVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLVNEVVHADSRE 663
+V EMVRLIETATVPI VDSDGL+NGWN + +ELTGL EAIGK + +V S E
Sbjct: 617 AVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKHFLT-LVEDSSVE 675
Query: 664 TLTNVLSRALQGEEEKNVELKIK-HFGIDQKKVVYLRANACTSRDYTNAIVGVCFVGQDI 722
+ +L AL+G EE+NV+ +IK H + L NAC SRD +VGVCFV D+
Sbjct: 676 IVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVVGVCFVAHDL 735
Query: 723 THEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTGWKREEVIG 782
T +K V+DKF ++EGDYKAIIQ+ NPLIPPIF +DE C+EWN AM KLTG KREEVI
Sbjct: 736 TGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPAMSKLTGLKREEVID 795
Query: 783 KLLPGEIFG---NFCQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFDRNGKFVEVYITA 839
K+L GE+FG + C+LK Q+ N I+L ++ QD EK+ F FF R GK+VE +
Sbjct: 796 KMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAFFTRGGKYVECLLCV 855
Query: 840 SKRNDAAGNMIGCFCFLQIVSRD 862
SK+ D G + G FCFLQ+ S +
Sbjct: 856 SKKLDREGVVTGVFCFLQLASHE 878
>AT5G35840.1 | Symbols: PHYC | phytochrome C |
chr5:14008049-14011619 FORWARD LENGTH=1111
Length = 1111
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/870 (51%), Positives = 610/870 (70%), Gaps = 29/870 (3%)
Query: 12 SSFTSNMNTATTSNKDKALAQFSADAENLAEFEQSGASDKSFDYSKTV-LDSPRLVSE-- 68
SS TS + + + +Q DA+ FE+S ++ FDYS ++ L+ P E
Sbjct: 2 SSNTSRSCSTRSRQNSRVSSQVLVDAKLHGNFEES---ERLFDYSASINLNMPSSSCEIP 58
Query: 69 -EKMTAYLSKIQRGGLIQSFGCMLAIAESTFTIIGYSENCFQLLGLERH-IDSKQQLLGL 126
++ YL KIQRG LIQ FGC++ + E +I +SEN ++LGL H + S +Q L
Sbjct: 59 SSAVSTYLQKIQRGMLIQPFGCLIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREAL 118
Query: 127 -IGVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLE 185
IG D +LF P ++L KAV EIS+LNPI ++ R++ KPFYAILHRI+ G+VIDLE
Sbjct: 119 TIGTDVKSLFLSPGCSALEKAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLE 178
Query: 186 PARSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYK 245
P + ++ AG ++S KLA ++ SRLQ+ P + LLCDA+V+EV + TGYDRVMVYK
Sbjct: 179 PVSPDEVPVTAAGALRSYKLAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYK 238
Query: 246 FHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQS 305
FHED HGEV++E R D+EPYLGLHY ATDIPQA+RFLF +N+VRMICDC A VKV+Q
Sbjct: 239 FHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQD 298
Query: 306 EDLMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGNDT----------TRLWG 355
+ L QP+ L STLRAP GCH+QYM+NMGS+ASLVM+V +NG+D+ LWG
Sbjct: 299 KSLSQPISLSGSTLRAPHGCHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWG 358
Query: 356 LLVCHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDMLLRD 415
L+VCHH SPR+VPFP+RYACEFL Q FG+Q+ E + A + EKRIL+TQ++LCDML R+
Sbjct: 359 LVVCHHASPRFVPFPLRYACEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRN 418
Query: 416 APFGIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTGLST 475
AP GIVTQSP+IMDLVKCDGAALYY W LG TPTE+Q++D+ +W+L +HG +TG +T
Sbjct: 419 APIGIVTQSPNIMDLVKCDGAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTT 478
Query: 476 NSLAEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDDGGK 535
SL E+GYP A+ LG+ +CGMA I+ + FLFWFRS TAK++KWGGA+H P D+ DG +
Sbjct: 479 ESLMESGYPDASVLGESICGMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKR 537
Query: 536 MNPRSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKIGTA 595
M+PRSSFKAF+EIV+ KS+PW+ E++AI+SLQLI++ S Q+ + T+ + +
Sbjct: 538 MHPRSSFKAFMEIVRWKSVPWDDMEMDAINSLQLIIKGSLQEEHS---KTVVDVPLVDNR 594
Query: 596 IERKGELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKSLVNE 655
+++ EL + EMVRLI+TA VPIF VD+ G+INGWN + +E+TGL +AIGK V++
Sbjct: 595 VQKVDELCVIVNEMVRLIDTAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSD 653
Query: 656 VVHADSRETLTNVLSRALQGEEEKNVELKIKHFGIDQKKV-VYLRANACTSRDYTNAIVG 714
+V DS ET+ N+L+ AL+G EE+ E++I+ FG +K V L N C SRD TN ++G
Sbjct: 654 LVEDDSVETVKNMLALALEGSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLG 713
Query: 715 VCFVGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAMEKLTG 774
VCF+GQD+T +K + + + +++GDY I+ S + LIPPIF ++EN CSEWN AM+KL+G
Sbjct: 714 VCFIGQDVTGQKTLTENYSRVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSG 773
Query: 775 WKREEVIGKLLPGEIFGN---FCQLKGQDTLTNFMILLYRGLSGQDS-EKLPFGFFDRNG 830
KREEV+ K+L GE+F C LK DTLT I +SGQ + EKL FGF+ R+G
Sbjct: 774 IKREEVVNKILLGEVFTTDDYGCCLKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDG 833
Query: 831 KFVEVYITASKRNDAAGNMIGCFCFLQIVS 860
F+E ++A+KR D G + G CFLQ+ S
Sbjct: 834 SFIEALLSANKRTDIEGKVTGVLCFLQVPS 863
>AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3098892 REVERSE LENGTH=1014
Length = 1014
Score = 869 bits (2245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/755 (56%), Positives = 538/755 (71%), Gaps = 20/755 (2%)
Query: 127 IGVDATTLFTPPSGASLAKAVSSREISLLNPIWVYTRTTQKPFYAILHRIDVGVVIDLEP 186
IG D +LFT PS ++L KA+ ++SLLNPI V+ RT+ KPFYAI+HR+ ++ID EP
Sbjct: 17 IGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIIDFEP 76
Query: 187 ARSSDPALSLAGTVQSQKLAIRASSRLQSRPGEDSGLLCDAVVEEVQKFTGYDRVMVYKF 246
+ + ++ AG +QS KLA +A +RLQS P LCD +V+EV + TGYDRVM YKF
Sbjct: 77 VKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKF 136
Query: 247 HEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCQANAVKVIQSE 306
HEDDHGEVVSE+ + LEPYLGLHYPATDIPQAARFLF +N+VRMI DC A +V+Q E
Sbjct: 137 HEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQDE 196
Query: 307 DLMQPLYLVNSTLRAPQGCHSQYMANMGSIASLVMAVIVNGND--------TT------R 352
L L L STLRAP CH QYMANM SIASLVMAV+VN D TT R
Sbjct: 197 KLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQKRKR 256
Query: 353 LWGLLVCHHTSPRYVPFPVRYACEFLMQAFGLQLYMEIQLAAQMAEKRILKTQTLLCDML 412
LWGL+VCH+T+PR+VPFP+RYACEFL Q F + + E++L QM EK IL+TQTLLCDML
Sbjct: 257 LWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLCDML 316
Query: 413 LRDAPFGIVTQSPSIMDLVKCDGAALYYDGKCWLLGTTPTESQVKDIAEWLLVNHGDSTG 472
+RDAP GIV+QSP+IMDLVKCDGAAL Y K W LGTTP+E +++IA WL H DSTG
Sbjct: 317 MRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDSTG 376
Query: 473 LSTNSLAEAGYPGATSLGDPVCGMATARINSRHFLFWFRSHTAKEMKWGGAKHHPEDKDD 532
LST+SL +AG+P A SLGD VCGMA RI+S+ +FWFRSHTA E++WGGAKH P+D+DD
Sbjct: 377 LSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDD 436
Query: 533 GGKMNPRSSFKAFLEIVKRKSLPWEVSEINAIHSLQLIMRDSFQDTQNFGPTTLNFIQKI 592
+M+PRSSFKAFLE+VK +SLPW+ E++AIHSLQLI+R++F+D++ T K+
Sbjct: 437 ARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYSKL 496
Query: 593 G-TAIERKGELSSVACEMVRLIETATVPIFGVDSDGLINGWNVQTSELTGLQASEAIGKS 651
I+ EL +V EMVRLIETATVPI VDSDGL+NGWN + +ELTGL EAIGK
Sbjct: 497 NDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKH 556
Query: 652 LVNEVVHADSRETLTNVLSRALQGEEEKNVELKIK-HFGIDQKKVVYLRANACTSRDYTN 710
+ +V S E + +L AL+G EE+NV+ +IK H + L NAC SRD
Sbjct: 557 FLT-LVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHE 615
Query: 711 AIVGVCFVGQDITHEKVVLDKFIKLEGDYKAIIQSLNPLIPPIFASDENACCSEWNAAME 770
+VGVCFV D+T +K V+DKF ++EGDYKAIIQ+ NPLIPPIF +DE C+EWN AM
Sbjct: 616 NVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPAMS 675
Query: 771 KLTGWKREEVIGKLLPGEIFG---NFCQLKGQDTLTNFMILLYRGLSGQDSEKLPFGFFD 827
KLTG KREEVI K+L GE+FG + C+LK Q+ N I+L ++ QD EK+ F FF
Sbjct: 676 KLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAFFT 735
Query: 828 RNGKFVEVYITASKRNDAAGNMIGCFCFLQIVSRD 862
R GK+VE + SK+ D G + G FCFLQ+ S +
Sbjct: 736 RGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHE 770