Miyakogusa Predicted Gene

Lj4g3v2295530.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2295530.1 tr|G7IIU2|G7IIU2_MEDTR p21-activated protein
kinase-interacting protein 1-like protein OS=Medicago t,77.11,0,WD40
repeats,WD40 repeat; WD40 REPEAT PROTEIN,NULL; no
description,WD40/YVTN repeat-like-containing ,gene.g56631.t1.1
         (442 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G65030.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   402   e-112
AT3G49660.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...    58   1e-08

>AT1G65030.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr1:24156798-24158511 FORWARD LENGTH=345
          Length = 345

 Score =  402 bits (1033), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 202/344 (58%), Positives = 256/344 (74%), Gaps = 17/344 (4%)

Query: 70  INLVAGSYERFIWGFNLNPNRQ-------TLKPIFSYPSHLSVIKTLAVCGSVVASGGTD 122
           ++++AGSYERFIWGF L P +        TL P+FSYPSH+S I T+A  G   ASGG+D
Sbjct: 1   MSIIAGSYERFIWGFKLKPTKHDAESQTLTLSPLFSYPSHISPITTVACSGPAAASGGSD 60

Query: 123 DTIHLYNLSNASSLGSL--HDHSATVTALAFHSLPNIPHPTTLISADADGSVCIFDADSF 180
           DTIHLY+L +ASSLGSL  H+H+A++TAL+F++  ++  P  LISA ADGSV IFD D F
Sbjct: 61  DTIHLYDLPSASSLGSLLDHNHAASITALSFYTPSSLSFPRNLISAAADGSVAIFDTDPF 120

Query: 181 VHLKTLPIHRKAVNDLALHPSGTLALTVSRDRCFAMVNLVRGRRSFCCRLDNEATIVKFN 240
           V LK+   H+KAVNDLA+HPSG LAL V RD  FAM+NLVRG+RSFCCRL +EA++VKF+
Sbjct: 121 VLLKSFRPHKKAVNDLAIHPSGKLALAVYRDEFFAMLNLVRGKRSFCCRLGHEASLVKFD 180

Query: 241 AAGDAFFMAADETVSVHQAEDARLLFQLQCP--KRVLCAAPDKNGLRYTGGEDPNITAWE 298
            +G+ F+M     V VHQ+EDA+LL +L+ P  KR+LCA P ++G  +TGGED  ITAW+
Sbjct: 181 PSGERFYMVVSNKVGVHQSEDAKLLLELENPSRKRILCATPGESGTLFTGGEDRAITAWD 240

Query: 299 IKSGKVAYSIEEAHTARVKGIVVL--GDCDGATEGDDPYLVASASSDGTIRVWDVRMAAT 356
             SGK+AYSIE+AH AR+KGIVVL   D DG+ E  DPYL+ SASSDG IRVWDVRMAA 
Sbjct: 241 TNSGKLAYSIEDAHPARIKGIVVLTRNDSDGSLE--DPYLIGSASSDGIIRVWDVRMAAK 298

Query: 357 EKPTPLAECKTESRLTCLSGSSMKLI--PKQGKGNPKVEDQMME 398
           E   PLAE  T+SRLTCL+GS++K +  P+ GK  P+  D+  E
Sbjct: 299 ENTKPLAETNTKSRLTCLAGSALKSMRRPQIGKQEPQKVDEEHE 342


>AT3G49660.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr3:18413690-18415223 FORWARD LENGTH=317
          Length = 317

 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/292 (23%), Positives = 121/292 (41%), Gaps = 32/292 (10%)

Query: 72  LVAGSYERFIWGFNLNP-NRQTLKPIFSYPSHLSVIKTLAVCGS--VVASGGTDDTIHLY 128
           L + S ++ I  + +N  N    +P+  +  H + I  +A       + S   D T+ L+
Sbjct: 39  LASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLW 98

Query: 129 NLSNASSLGSLHDHSATVTALAFHSLPNIPHPTTLISADADGSVCIFDADSFVHLKTLPI 188
           ++   S + +L  H+     + F+     P    ++S   D +V I+D  +   LK LP 
Sbjct: 99  DVETGSLIKTLIGHTNYAFCVNFN-----PQSNMIVSGSFDETVRIWDVTTGKCLKVLPA 153

Query: 189 HRKAVNDLALHPSGTLALTVSRDRCFAMVNLVRGRRSFCCR--LDNE---ATIVKFNAAG 243
           H   V  +  +  G+L ++ S D    +  +       C +  +D+E    + V+F+  G
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYD---GLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG 210

Query: 244 DAFFMAA-DETVSVHQAEDARLL----FQLQCPKRVLCAAPDKNGLR-YTGGEDPNITAW 297
               +   D T+ +     A+ L      +     +  A    NG R  +G ED  +  W
Sbjct: 211 KFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMW 270

Query: 298 EIKSGKVAYSIEEAHTARVKGIVVLGDCDGATEGDDPYLVASASSDGTIRVW 349
           E+ S K+   + E HT  V  +         TE     L+AS S D T+R+W
Sbjct: 271 ELNSKKLLQKL-EGHTETVMNVAC-----HPTEN----LIASGSLDKTVRIW 312