Miyakogusa Predicted Gene

Lj4g3v2295500.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2295500.1 Non Chatacterized Hit- tr|C5XWB9|C5XWB9_SORBI
Putative uncharacterized protein Sb04g024210
OS=Sorghu,37.5,2e-19,seg,NULL,
NODE_57364_length_565_cov_90.143364.path1.1
         (152 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G07640.1 | Symbols:  | unknown protein; Has 27 Blast hits to ...   101   2e-22

>AT3G07640.1 | Symbols:  | unknown protein; Has 27 Blast hits to 27
           proteins in 10 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr3:2438171-2439661 FORWARD LENGTH=241
          Length = 241

 Score =  101 bits (252), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/144 (35%), Positives = 86/144 (59%), Gaps = 2/144 (1%)

Query: 1   MKVAPTVVFLFRDTQGGFVSAISEALHPNPSSSFTRLEDSFELSLEGYGIKDLKASGNVI 60
           MKVA  +VFL+ D+ G F + IS+ L+P+PSS   +LE+  +L L+ YG++ ++  G+++
Sbjct: 1   MKVAEKIVFLWNDSDG-FAATISDTLNPSPSSPLRKLEEQIQLPLDKYGVEGVETGGSIV 59

Query: 61  HHVDNHGIYQVSVVVMQHYEPPVLACALNEVLNEIAGDKXXXXXXXXXXXXXXXXKVKGQ 120
           H VD + +YQVS+ +++ YEPPVL CA+NE+L+ I                    K+K  
Sbjct: 60  HFVDENEVYQVSIFLLRSYEPPVLVCAMNELLDLITRGS-STLPTIIAPFFVAASKLKFN 118

Query: 121 SKSLRSDEGKPLILGIQVGQSTDV 144
           ++SL ++  K  +  +QV   T+ 
Sbjct: 119 NRSLEANNRKASLHYVQVATETET 142