Miyakogusa Predicted Gene

Lj4g3v2282930.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2282930.1 Non Chatacterized Hit- tr|I1KMT7|I1KMT7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.37624
PE,90.42,0,JAB1/MPN domain,NULL; JAB,JAB1/Mov34/MPN/PAD-1; SUBFAMILY
NOT NAMED,NULL; AMSH,NULL; JAB/MPN domain,,CUFF.50687.1
         (261 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G16144.1 | Symbols: AMSH3 | associated molecule with the SH3 ...   420   e-118
AT1G48790.1 | Symbols: AMSH1 | associated molecule with the SH3 ...   294   5e-80
AT1G10600.1 | Symbols: AMSH2 | associated molecule with the SH3 ...   258   3e-69
AT1G10600.3 | Symbols: AMSH2 | associated molecule with the SH3 ...   254   5e-68
AT1G10600.2 | Symbols: AMSH2 | associated molecule with the SH3 ...   191   3e-49

>AT4G16144.1 | Symbols: AMSH3 | associated molecule with the SH3
           domain of STAM 3 | chr4:9138053-9141422 REVERSE
           LENGTH=507
          Length = 507

 Score =  420 bits (1079), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 194/259 (74%), Positives = 225/259 (86%)

Query: 1   MDSVLSLDDGRWMRPTVESYAPLVTESREDPLQLLNIKQPLPPPVLAQVYPERAPIPPSK 60
           ++SVLSLDDGRW R +    +  ++++ EDP Q + +KQP PPPVLAQV+ E A I PSK
Sbjct: 249 LNSVLSLDDGRWQRHSEAVNSQFISDATEDPFQFVGMKQPSPPPVLAQVHQELAQICPSK 308

Query: 61  VADPRPGPAKSSHDSEHGPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNR 120
           VADPRPGPA  S + + G  +YQHLHVPV++M++FLRLA  NT++NLETCGVLAGSLKNR
Sbjct: 309 VADPRPGPAIPSLEGKEGSNSYQHLHVPVRIMDDFLRLARSNTERNLETCGVLAGSLKNR 368

Query: 121 VFHITTLIIPKQESTSDSCQTLNEEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTH 180
           VFHITTLIIPKQESTSDSCQTLNEEEIFEVQD LSLF LGWIHTHP+QTCFMSSVDLHTH
Sbjct: 369 VFHITTLIIPKQESTSDSCQTLNEEEIFEVQDRLSLFPLGWIHTHPTQTCFMSSVDLHTH 428

Query: 181 YSYQIMLPEAIAIVMAPTDTASPHGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYE 240
           YSYQIMLPEA+AIVMAPTD ++PHGIFHLSDP GVS+IRNCQQ GFHPHEE  DG+PIYE
Sbjct: 429 YSYQIMLPEAVAIVMAPTDESTPHGIFHLSDPSGVSVIRNCQQRGFHPHEESEDGNPIYE 488

Query: 241 HCSHVYINANLKFDVVDLR 259
           HCSHV++NA LK++V+DLR
Sbjct: 489 HCSHVFLNAKLKYEVLDLR 507


>AT1G48790.1 | Symbols: AMSH1 | associated molecule with the SH3
           domain of STAM 1 | chr1:18043925-18047427 REVERSE
           LENGTH=507
          Length = 507

 Score =  294 bits (752), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 140/223 (62%), Positives = 166/223 (74%), Gaps = 1/223 (0%)

Query: 37  IKQPLPPPVLAQVYPERAPIPPSKVADPRPGPAKSSHDSEHGPTTYQHLHVPVKMMEEFL 96
           I+QP PPPVLA+V  +  P    +V +P      S  D      +   LH+   MM+ F+
Sbjct: 286 IRQPSPPPVLAEVQ-DLVPALCPEVREPECMIENSLPDESLRSESPLELHIATSMMDTFM 344

Query: 97  RLALENTQKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDGLSL 156
           RLA  NT+KNLETCG+LAGSLKNR F+IT LIIPKQESTSDSCQ  NEEEIFEVQD  SL
Sbjct: 345 RLAKSNTKKNLETCGILAGSLKNRKFYITALIIPKQESTSDSCQATNEEEIFEVQDKQSL 404

Query: 157 FSLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTASPHGIFHLSDPGGVS 216
           F LGWIHTHP+Q+CFMSS+D+HTHYSYQIMLPEA+AIVMAP D++  HGIF L+ PGG++
Sbjct: 405 FPLGWIHTHPTQSCFMSSIDVHTHYSYQIMLPEAVAIVMAPQDSSRNHGIFRLTTPGGMT 464

Query: 217 IIRNCQQSGFHPHEEPSDGSPIYEHCSHVYINANLKFDVVDLR 259
           +IRNC + GFH H  P DG PIY  C  VY+N NLKFDV+DLR
Sbjct: 465 VIRNCDRRGFHAHSSPEDGGPIYNTCKEVYMNPNLKFDVIDLR 507


>AT1G10600.1 | Symbols: AMSH2 | associated molecule with the SH3
           domain of STAM 2 | chr1:3503765-3505190 FORWARD
           LENGTH=223
          Length = 223

 Score =  258 bits (658), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 110/193 (56%), Positives = 151/193 (78%)

Query: 67  GPAKSSHDSEHGPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNRVFHITT 126
           G    +H         + +H+  +++E+F  LA ENT+K+LETCG LA  L+  +F++TT
Sbjct: 31  GTDNINHGESSEAKILRDVHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTT 90

Query: 127 LIIPKQESTSDSCQTLNEEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTHYSYQIM 186
           LIIPKQESTS+SCQ +NE E+F +Q+   L+ +GWIHTHPSQ CFMSSVDLHTHYSYQ+M
Sbjct: 91  LIIPKQESTSNSCQAMNEVEVFSIQNERELYPVGWIHTHPSQGCFMSSVDLHTHYSYQVM 150

Query: 187 LPEAIAIVMAPTDTASPHGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYEHCSHVY 246
           +PEA AIV+APTD++  +GIF L+DPGG+ ++R C ++GFHPH+EP DG+P+YEHCS+VY
Sbjct: 151 VPEAFAIVVAPTDSSKSYGIFKLTDPGGMEVLRGCSETGFHPHKEPEDGNPVYEHCSNVY 210

Query: 247 INANLKFDVVDLR 259
            N+NL+F++ DLR
Sbjct: 211 KNSNLRFEIFDLR 223


>AT1G10600.3 | Symbols: AMSH2 | associated molecule with the SH3
           domain of STAM 2 | chr1:3503765-3505190 FORWARD
           LENGTH=222
          Length = 222

 Score =  254 bits (648), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 111/193 (57%), Positives = 151/193 (78%), Gaps = 1/193 (0%)

Query: 67  GPAKSSHDSEHGPTTYQHLHVPVKMMEEFLRLALENTQKNLETCGVLAGSLKNRVFHITT 126
           G    +H         + +H+  +++E+F  LA ENT+K+LETCG LA  L+  +F++TT
Sbjct: 31  GTDNINHGESSEAKILRDVHISERLLEDFTELARENTEKDLETCGTLAAFLERGIFYVTT 90

Query: 127 LIIPKQESTSDSCQTLNEEEIFEVQDGLSLFSLGWIHTHPSQTCFMSSVDLHTHYSYQIM 186
           LIIPKQESTS+SCQ +NE E+F +Q+   L+ +GWIHTHPSQ CFMSSVDLHTHYSYQ+M
Sbjct: 91  LIIPKQESTSNSCQAMNEVEVFSIQNERELYPVGWIHTHPSQGCFMSSVDLHTHYSYQVM 150

Query: 187 LPEAIAIVMAPTDTASPHGIFHLSDPGGVSIIRNCQQSGFHPHEEPSDGSPIYEHCSHVY 246
           +PEA AIV+APTD +S +GIF L+DPGG+ ++R C ++GFHPH+EP DG+P+YEHCS+VY
Sbjct: 151 VPEAFAIVVAPTD-SSNYGIFKLTDPGGMEVLRGCSETGFHPHKEPEDGNPVYEHCSNVY 209

Query: 247 INANLKFDVVDLR 259
            N+NL+F++ DLR
Sbjct: 210 KNSNLRFEIFDLR 222


>AT1G10600.2 | Symbols: AMSH2 | associated molecule with the SH3
           domain of STAM 2 | chr1:3503907-3505190 FORWARD
           LENGTH=166
          Length = 166

 Score =  191 bits (486), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 83/165 (50%), Positives = 118/165 (71%), Gaps = 6/165 (3%)

Query: 95  FLRLALENTQKNLETCGVLAGSLKNRVFHITTLIIPKQESTSDSCQTLNEEEIFEVQDGL 154
           + R++L   ++ L     L G        +  L++      +  CQ +NE E+F +Q+  
Sbjct: 8   YWRISLSLQERTLRRTSRLVG------LSLPFLVLRFSSFMNLMCQAMNEVEVFSIQNER 61

Query: 155 SLFSLGWIHTHPSQTCFMSSVDLHTHYSYQIMLPEAIAIVMAPTDTASPHGIFHLSDPGG 214
            L+ +GWIHTHPSQ CFMSSVDLHTHYSYQ+M+PEA AIV+APTD++  +GIF L+DPGG
Sbjct: 62  ELYPVGWIHTHPSQGCFMSSVDLHTHYSYQVMVPEAFAIVVAPTDSSKSYGIFKLTDPGG 121

Query: 215 VSIIRNCQQSGFHPHEEPSDGSPIYEHCSHVYINANLKFDVVDLR 259
           + ++R C ++GFHPH+EP DG+P+YEHCS+VY N+NL+F++ DLR
Sbjct: 122 MEVLRGCSETGFHPHKEPEDGNPVYEHCSNVYKNSNLRFEIFDLR 166