Miyakogusa Predicted Gene
- Lj4g3v2267600.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2267600.2 Non Chatacterized Hit- tr|I3TA67|I3TA67_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.62,0,UQ_con,Ubiquitin-conjugating enzyme, E2;
Ubiquitin-conjugating enzyme E2, catalytic d,NULL;
UBC-like,CUFF.50669.2
(305 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G17000.1 | Symbols: UBC32 | ubiquitin-conjugating enzyme 32 |... 385 e-107
AT5G50430.2 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |... 122 2e-28
AT5G50430.1 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |... 122 2e-28
AT1G17280.2 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |... 122 3e-28
AT1G17280.1 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |... 122 3e-28
AT5G50430.3 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |... 105 5e-23
AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 83 2e-16
AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 83 2e-16
AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 83 2e-16
AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |... 82 6e-16
AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating en... 82 6e-16
AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 | c... 81 8e-16
AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 81 8e-16
AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 81 8e-16
AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 81 1e-15
AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 81 1e-15
AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |... 81 1e-15
AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 | c... 80 1e-15
AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |... 79 5e-15
AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 79 5e-15
AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 78 6e-15
AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 78 7e-15
AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |... 78 7e-15
AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |... 75 4e-14
AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzy... 74 1e-13
AT5G25760.2 | Symbols: PEX4 | peroxin4 | chr5:8967983-8969173 FO... 72 4e-13
AT5G25760.1 | Symbols: PEX4, UBC21 | peroxin4 | chr5:8967983-896... 72 4e-13
AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 | chr5... 72 5e-13
AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 67 1e-11
AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |... 67 1e-11
AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 66 2e-11
AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein ... 66 2e-11
AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enz... 66 3e-11
AT1G36340.1 | Symbols: UBC31 | ubiquitin-conjugating enzyme 31 |... 65 5e-11
AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 65 6e-11
AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | Ubiquitin-con... 65 6e-11
AT3G24515.1 | Symbols: UBC37 | ubiquitin-conjugating enzyme 37 |... 65 8e-11
AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enz... 64 1e-10
AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 63 2e-10
AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 | c... 60 1e-09
AT1G78870.3 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 60 2e-09
AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |... 59 4e-09
AT1G78870.1 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enz... 59 5e-09
AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |... 59 6e-09
AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 57 2e-08
AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein ... 57 2e-08
AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |... 57 2e-08
AT1G50490.1 | Symbols: UBC20 | ubiquitin-conjugating enzyme 20 |... 56 3e-08
AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |... 55 5e-08
AT2G46030.1 | Symbols: UBC6 | ubiquitin-conjugating enzyme 6 | c... 54 1e-07
AT3G20060.1 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 | ... 54 2e-07
AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |... 54 2e-07
AT5G41340.1 | Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzy... 53 2e-07
AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 | c... 53 2e-07
>AT3G17000.1 | Symbols: UBC32 | ubiquitin-conjugating enzyme 32 |
chr3:5797296-5799467 FORWARD LENGTH=309
Length = 309
Score = 385 bits (990), Expect = e-107, Method: Compositional matrix adjust.
Identities = 200/311 (64%), Positives = 230/311 (73%), Gaps = 22/311 (7%)
Query: 2 KNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPA 61
KNPAVKRILQEVKEMQ+NPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGI+HGRIQLPA
Sbjct: 9 KNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQLPA 68
Query: 62 EYPFKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGA 121
+YPFKPPSFMLLTPNGRFET TKICLSISN+HPEHWQPSWSVRTALVALIAFMPT+PNGA
Sbjct: 69 DYPFKPPSFMLLTPNGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTSPNGA 128
Query: 122 LGSLDYKKEERRALAIKSREASPKFGTPERQRLIDEIHEYMLSKAPPVPQVSPTQASEEQ 181
LGS+DY K+ERR LAIKSRE PK+G+PERQ++IDEIH+Y+LSKA VP+ P + S+
Sbjct: 129 LGSVDYPKDERRTLAIKSRETPPKYGSPERQKIIDEIHQYILSKATVVPKPLPLECSQAP 188
Query: 182 PPIEEDQTQVQLHNPEALPAGEVIPDQSV--------DRIIEEQEVTVNANPNPSEVEAS 233
+ E +QV E A V+ ++S+ D+IIEE VN + A
Sbjct: 189 SIVSEAHSQV-----EPQEAITVVEERSIATTDTIVDDQIIEETAEAVNTAASVVPAAAP 243
Query: 234 TETPSNVVSSNQLLQNSETTRGQNLKPETRVQKP-DDRLFTWAAIGLTIAIVVLLLKKFI 292
VV + + G+ QKP DDRLFTWAA+GLTIAI+VLLLKKFI
Sbjct: 244 LPAVEVVVKA--------SVSGEQRMARRAAQKPVDDRLFTWAAVGLTIAIMVLLLKKFI 295
Query: 293 KSTEHGAVFMD 303
KS + FMD
Sbjct: 296 KSNGYSTGFMD 306
>AT5G50430.2 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |
chr5:20534366-20536307 REVERSE LENGTH=243
Length = 243
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
+KR+ +E + + P ++ P +I EW + + G T F GG ++G+I+ P EYP
Sbjct: 6 CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65
Query: 65 FKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGS 124
+KPP + TPNGRF TQ KICLS+S+ HPE W P WSV + L L++FM N + GS
Sbjct: 66 YKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN-SPTTGS 124
Query: 125 LDYKKEERRALAIKS 139
++ E++ LA S
Sbjct: 125 VNTSVAEKQRLAKSS 139
>AT5G50430.1 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |
chr5:20534366-20536307 REVERSE LENGTH=243
Length = 243
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
+KR+ +E + + P ++ P +I EW + + G T F GG ++G+I+ P EYP
Sbjct: 6 CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65
Query: 65 FKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGS 124
+KPP + TPNGRF TQ KICLS+S+ HPE W P WSV + L L++FM N + GS
Sbjct: 66 YKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN-SPTTGS 124
Query: 125 LDYKKEERRALAIKS 139
++ E++ LA S
Sbjct: 125 VNTSVAEKQRLAKSS 139
>AT1G17280.2 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |
chr1:5917146-5919162 REVERSE LENGTH=237
Length = 237
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
+KR+ +E + + P ++ P +I EW + + G T F GG ++G+I+ P EYP
Sbjct: 6 CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65
Query: 65 FKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF-MPTNPNGALG 123
+KPP + TPNGRF TQ KICLS+S+ HPE W P WSV + L L++F M T+P G
Sbjct: 66 YKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPT--TG 123
Query: 124 SLDYKKEERRALAIKSREASPKFGTPERQRLIDEIHE 160
S++ E++ LA S + K TP ++L E E
Sbjct: 124 SVNTTVIEKQRLAKSSLAFNCK--TPAFRKLFPEYVE 158
>AT1G17280.1 | Symbols: UBC34 | ubiquitin-conjugating enzyme 34 |
chr1:5917146-5919162 REVERSE LENGTH=237
Length = 237
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 5/157 (3%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
+KR+ +E + + P ++ P +I EW + + G T F GG ++G+I+ P EYP
Sbjct: 6 CIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEYP 65
Query: 65 FKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF-MPTNPNGALG 123
+KPP + TPNGRF TQ KICLS+S+ HPE W P WSV + L L++F M T+P G
Sbjct: 66 YKPPGITMTTPNGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPT--TG 123
Query: 124 SLDYKKEERRALAIKSREASPKFGTPERQRLIDEIHE 160
S++ E++ LA S + K TP ++L E E
Sbjct: 124 SVNTTVIEKQRLAKSSLAFNCK--TPAFRKLFPEYVE 158
>AT5G50430.3 | Symbols: UBC33 | ubiquitin-conjugating enzyme 33 |
chr5:20534366-20536307 REVERSE LENGTH=230
Length = 230
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
+KR+ +E + + P ++ P +I EW+ G ++G+I+ P EYP
Sbjct: 6 CIKRLQKEYRALCKEPVSHVVARPSPNDILEWR-------------GFYYGKIKFPPEYP 52
Query: 65 FKPPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPNGALGS 124
+KPP + TPNGRF TQ KICLS+S+ HPE W P WSV + L L++FM N + GS
Sbjct: 53 YKPPGITMTTPNGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDN-SPTTGS 111
Query: 125 LDYKKEERRALAIKS 139
++ E++ LA S
Sbjct: 112 VNTSVAEKQRLAKSS 126
>AT4G27960.1 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917203 REVERSE LENGTH=148
Length = 148
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--VNSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=148
Length = 148
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--VNSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT3G08690.2 | Symbols: UBC11 | ubiquitin-conjugating enzyme 11 |
chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 65 FKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP SF + + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVSFKTKVYHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT3G08690.1 | Symbols: UBC11, ATUBC11 | ubiquitin-conjugating
enzyme 11 | chr3:2641487-2642489 FORWARD LENGTH=148
Length = 148
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYP 61
Query: 65 FKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP SF + + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVSFKTKVYHPNINSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT5G41700.5 | Symbols: UBC8 | ubiquitin conjugating enzyme 8 |
chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT5G41700.1 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT5G41700.2 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=148
Length = 148
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT5G53300.4 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT5G53300.2 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT5G53300.1 | Symbols: UBC10 | ubiquitin-conjugating enzyme 10 |
chr5:21632802-21633989 REVERSE LENGTH=148
Length = 148
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 114
>AT4G27960.2 | Symbols: UBC9 | ubiquitin conjugating enzyme 9 |
chr4:13916065-13917293 REVERSE LENGTH=178
Length = 178
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG+F I P +YP
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYP 91
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 92 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 144
>AT2G16740.1 | Symbols: UBC29 | ubiquitin-conjugating enzyme 29 |
chr2:7267880-7268737 FORWARD LENGTH=148
Length = 148
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A +RIL+E+KE+Q +P + P E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP + T PN + ICL I + W P+ ++ L+++ + + T+PN
Sbjct: 62 FKPPKVVFRTKVFHPN--INSNGNICLDILK---DQWSPALTISKVLLSICSLL-TDPN 114
>AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=157
Length = 157
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 67/128 (52%), Gaps = 19/128 (14%)
Query: 5 AVKRILQEVKEMQSNP---------SDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHG 55
A KRIL+E+K++Q +P + + P+ E++F WQ I GP D+ + GG+F
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFLV 61
Query: 56 RIQLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALI 111
I P +YPFKPP T PN + ICL I E W P+ ++ L+++
Sbjct: 62 TIHFPPDYPFKPPKVAFRTKVFHPN--VNSNGSICLDILK---EQWSPALTISKVLLSIC 116
Query: 112 AFMPTNPN 119
+ + T+PN
Sbjct: 117 SLL-TDPN 123
>AT5G41700.4 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677223 FORWARD LENGTH=149
Length = 149
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
Query: 5 AVKRILQEVKEMQSNP-SDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEY 63
A KRIL+E+K++Q +P + + P+ E++F WQ I GP ++ + GG+F I P +Y
Sbjct: 2 ASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDY 61
Query: 64 PFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
PFKPP T PN + ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 62 PFKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 115
>AT5G56150.2 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRI +E++++Q +P + P +++F+WQ I GP D+ F GG+F I P +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ +V L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVYHPN--INSNGSICLDILK---EQWSPALTVSKVLLSICSLL-TDPN 114
>AT5G56150.1 | Symbols: UBC30 | ubiquitin-conjugating enzyme 30 |
chr5:22729756-22730964 FORWARD LENGTH=148
Length = 148
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 10/119 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRI +E++++Q +P + P +++F+WQ I GP D+ F GG+F I P +YP
Sbjct: 2 ASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
FKPP T PN + ICL I E W P+ +V L+++ + + T+PN
Sbjct: 62 FKPPKVAFRTKVYHPN--INSNGSICLDILK---EQWSPALTVSKVLLSICSLL-TDPN 114
>AT3G08700.1 | Symbols: UBC12 | ubiquitin-conjugating enzyme 12 |
chr3:2643482-2644545 FORWARD LENGTH=149
Length = 149
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 68/118 (57%), Gaps = 7/118 (5%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPL-EENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEY 63
A KRI +E+++MQ +P + + P+ EE+IF WQ I GP D+ + GG+F I ++Y
Sbjct: 2 ASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDY 61
Query: 64 PFKPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
PFKPP +F + +++ ICL I E W P+ + L+++ + + T+PN
Sbjct: 62 PFKPPKVNFKTKVYHPNIDSKGSICLDILK---EQWSPAPTTSKVLLSICSLL-TDPN 115
>AT5G41700.3 | Symbols: UBC8, ATUBC8 | ubiquitin conjugating enzyme
8 | chr5:16676072-16677021 FORWARD LENGTH=145
Length = 145
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSV 103
FKPP T PN + ICL I E W P+ ++
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTI 99
>AT5G25760.2 | Symbols: PEX4 | peroxin4 | chr5:8967983-8969173
FORWARD LENGTH=157
Length = 157
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 8 RILQEVKEMQSN--PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPF 65
R+ +E KE+Q D + + NIF+W I+GP +T +EGG+F +P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 66 KPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 114
+PP LT PN F+T +ICL I + W P+W++++ A+IA M
Sbjct: 67 QPPQVRFLTKIFHPNVHFKT-GEICLDILKN---AWSPAWTLQSVCRAIIALM 115
>AT5G25760.1 | Symbols: PEX4, UBC21 | peroxin4 |
chr5:8967983-8969173 FORWARD LENGTH=157
Length = 157
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 10/113 (8%)
Query: 8 RILQEVKEMQSN--PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPF 65
R+ +E KE+Q D + + NIF+W I+GP +T +EGG+F +P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 66 KPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 114
+PP LT PN F+T +ICL I + W P+W++++ A+IA M
Sbjct: 67 QPPQVRFLTKIFHPNVHFKT-GEICLDILKN---AWSPAWTLQSVCRAIIALM 115
>AT5G53300.3 | Symbols: | ubiquitin-conjugating enzyme 10 |
chr5:21633187-21633989 REVERSE LENGTH=109
Length = 109
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG+F I P +YP
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYP 61
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSV 103
FKPP T PN + ICL I E W P+ ++
Sbjct: 62 FKPPKVAFRTKVFHPN--INSNGSICLDILK---EQWSPALTI 99
>AT1G64230.5 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 27 LPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFMLLT----PNGRFETQ 82
P+ E++F WQ I GP D+ + GG+F I P +YPFKPP T PN +
Sbjct: 66 CPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN--VNSN 123
Query: 83 TKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 124 GSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 156
>AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme 28 |
chr1:23833792-23835220 FORWARD LENGTH=190
Length = 190
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 10/97 (10%)
Query: 27 LPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFMLLT----PNGRFETQ 82
P+ E++F WQ I GP D+ + GG+F I P +YPFKPP T PN +
Sbjct: 66 CPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN--VNSN 123
Query: 83 TKICLSISNHHPEHWQPSWSVRTALVALIAFMPTNPN 119
ICL I E W P+ ++ L+++ + + T+PN
Sbjct: 124 GSICLDILK---EQWSPALTISKVLLSICSLL-TDPN 156
>AT1G14400.2 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M PA KR++++ K +Q +P P + NI W I GP DT ++GG F +Q
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-- 114
+YP KPP+ ++ PN ICL I + W P + V L ++ + +
Sbjct: 61 EDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQN---QWSPIYDVAAILTSIQSLLCD 115
Query: 115 --PTNPNGALGSLDYKKEER 132
P +P + + Y + +R
Sbjct: 116 PNPNSPANSEAARMYSESKR 135
>AT1G14400.1 | Symbols: UBC1, ATUBC1 | ubiquitin carrier protein 1 |
chr1:4927294-4928136 REVERSE LENGTH=152
Length = 152
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 13/140 (9%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M PA KR++++ K +Q +P P + NI W I GP DT ++GG F +Q
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-- 114
+YP KPP+ ++ PN ICL I + W P + V L ++ + +
Sbjct: 61 EDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQN---QWSPIYDVAAILTSIQSLLCD 115
Query: 115 --PTNPNGALGSLDYKKEER 132
P +P + + Y + +R
Sbjct: 116 PNPNSPANSEAARMYSESKR 135
>AT2G02760.1 | Symbols: ATUBC2, UBC2 | ubiquiting-conjugating enzyme
2 | chr2:774271-775149 FORWARD LENGTH=152
Length = 152
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M PA KR++++ K +Q +P P + NI W I GP DT ++GG F +Q
Sbjct: 1 MSTPARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT 116
+YP KPP+ ++ PN ICL I + W P + V L ++ + +
Sbjct: 61 EDYPNKPPTVRFVSRMFHPN--IYADGSICLDILQN---QWSPIYDVAAILTSIQSLLCD 115
Query: 117 -NPNGALGS 124
NPN S
Sbjct: 116 PNPNSPANS 124
>AT1G36340.1 | Symbols: UBC31 | ubiquitin-conjugating enzyme 31 |
chr1:13683791-13684924 REVERSE LENGTH=154
Length = 154
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 53/105 (50%), Gaps = 6/105 (5%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M A +RI E + M S S F NI+EW IRGP T +EGG+F+ I+ P
Sbjct: 5 MDKKAAQRIAMEYRAMISKESL-FSIGQNSNNIYEWTAVIRGPDGTPYEGGMFNLSIKFP 63
Query: 61 AEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEHWQPSWSV 103
+YPFKPP F TP + + IC++I + W P+ V
Sbjct: 64 TDYPFKPPKFTFKTPIYHPNINDEGSICMNILK---DKWTPALMV 105
>AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423828-4424797 REVERSE LENGTH=170
Length = 170
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 7 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
KRI +E+ E+ +P D + P +N++ W I GP T +EGGIF I P++YPFK
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 67 PPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVAL 110
PP + T T LS+ N + W P+ ++ L A+
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSV-NILRDSWSPALTITKVLQAI 141
>AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 |
Ubiquitin-conjugating enzyme family protein |
chr3:4423569-4424797 REVERSE LENGTH=182
Length = 182
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 7 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
KRI +E+ E+ +P D + P +N++ W I GP T +EGGIF I P++YPFK
Sbjct: 39 KRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFK 98
Query: 67 PPSFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVAL 110
PP + T T LS+ N + W P+ ++ L A+
Sbjct: 99 PPKLVFKTRIYHCNVDTAGDLSV-NILRDSWSPALTITKVLQAI 141
>AT3G24515.1 | Symbols: UBC37 | ubiquitin-conjugating enzyme 37 |
chr3:8934569-8936207 REVERSE LENGTH=409
Length = 409
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 61/114 (53%), Gaps = 8/114 (7%)
Query: 40 IRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFMLLTP--NGRFETQTKICLSISNHHPEH- 96
I GP DT + GIF+ +IQ+P YPF+PP TP + + +ICL I N P+
Sbjct: 51 IEGPEDTVYANGIFNLKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGA 110
Query: 97 WQPSWSVRTALVALIAFMPT-NPNGALG---SLDYKKEERRALAIKSREASPKF 146
WQPS ++ T L ++ + NP+ L S +YK R+ K+RE + K+
Sbjct: 111 WQPSLNISTVLTSMRLLLSEPNPDDGLMCEVSREYKY-NRQTFDYKAREMTEKY 163
>AT1G16890.2 | Symbols: UBC36, UBC13B | ubiquitin-conjugating enzyme
36 | chr1:5776550-5778327 REVERSE LENGTH=153
Length = 153
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 7 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
+RI++E + + S P+ + P EEN+ + I GP + +EGG+F + LP EYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGA 121
P LT PN + +ICL I + W P+ +RT L+++ A + NP+
Sbjct: 68 APKVRFLTKIYHPN--IDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDDP 122
Query: 122 LG 123
L
Sbjct: 123 LS 124
>AT1G78870.2 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=153
Length = 153
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%), Gaps = 10/122 (8%)
Query: 7 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
+RI++E + + S P+ + P E+N+ + I GP + +EGG+F + LP EYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNGA 121
P LT PN + +ICL I + W P+ +RT L+++ A + NP+
Sbjct: 68 APKVRFLTKIYHPN--IDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDDP 122
Query: 122 LG 123
L
Sbjct: 123 LS 124
>AT5G62540.1 | Symbols: UBC3 | ubiquitin-conjugating enzyme 3 |
chr5:25104679-25105465 FORWARD LENGTH=150
Length = 150
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 56/123 (45%), Gaps = 10/123 (8%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M PA KR++ + K +Q +P P + NI W I GP DT ++GG F +
Sbjct: 1 MTTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFT 60
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT 116
+YP KPP ++ PN ICL I + W P + V L ++ + +
Sbjct: 61 EDYPNKPPIVRFVSRMFHPN--IYADGSICLDILQN---QWSPIYDVAAVLTSIQSLL-C 114
Query: 117 NPN 119
+PN
Sbjct: 115 DPN 117
>AT1G78870.3 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29651858 FORWARD LENGTH=112
Length = 112
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 9/110 (8%)
Query: 7 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
+RI++E + + S P+ + P E+N+ + I GP + +EGG+F + LP EYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPEEYPMA 67
Query: 67 PPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIA 112
P LT PN + +ICL I + W P+ +RT L+ ++
Sbjct: 68 APKVRFLTKIYHPN--IDKLGRICLDILK---DKWSPALQIRTVLLRYMS 112
>AT1G16890.3 | Symbols: UBC36 | ubiquitin-conjugating enzyme 36 |
chr1:5776550-5778327 REVERSE LENGTH=162
Length = 162
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 7 KRILQEVKEMQSNPSDDFMSL---------PLEENIFEWQFAIRGPGDTEFEGGIFHGRI 57
+RI++E + + S P + S P EEN+ + I GP + +EGG+F +
Sbjct: 8 RRIIKETQRLLSEPGNFITSFDPSPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLEL 67
Query: 58 QLPAEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAF 113
LP EYP P LT PN + +ICL I + W P+ +RT L+++ A
Sbjct: 68 FLPEEYPMAAPKVRFLTKIYHPN--IDKLGRICLDILK---DKWSPALQIRTVLLSIQAL 122
Query: 114 MPT-NPNGAL 122
+ NP+ L
Sbjct: 123 LSAPNPDDPL 132
>AT1G78870.1 | Symbols: UBC35, UBC13A | ubiquitin-conjugating enzyme
35 | chr1:29650589-29652203 FORWARD LENGTH=154
Length = 154
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 11/123 (8%)
Query: 7 KRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEG-GIFHGRIQLPAEYPF 65
+RI++E + + S P+ + P E+N+ + I GP + +EG G+F + LP EYP
Sbjct: 8 RRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGRGVFKLELFLPEEYPM 67
Query: 66 KPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFMPT-NPNG 120
P LT PN + +ICL I + W P+ +RT L+++ A + NP+
Sbjct: 68 AAPKVRFLTKIYHPN--IDKLGRICLDILK---DKWSPALQIRTVLLSIQALLSAPNPDD 122
Query: 121 ALG 123
L
Sbjct: 123 PLS 125
>AT3G55380.1 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
chr3:20531520-20532895 FORWARD LENGTH=167
Length = 167
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 20 PSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFMLLT---- 74
P D F + L E+N+F+W +I GP DT +EGG F+ + P YP PP+ +
Sbjct: 21 PVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWH 80
Query: 75 PNGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFM-------P 115
PN + K+C+SI HP E W P +V + ++++I+ + P
Sbjct: 81 PN--VYSDGKVCISIL--HPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESP 136
Query: 116 TNPNGALGSLDYKKEERRALAIKSREA 142
N A D + E R+ ++ R +
Sbjct: 137 ANVEAAKEWRDNRAEFRKKVSRCVRRS 163
>AT5G50870.1 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=192
Length = 192
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 64/131 (48%), Gaps = 13/131 (9%)
Query: 8 RILQEVKEMQSN-PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
RI +E+++ + N S P +N+ I GP T +EGG F I +P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 67 PPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM----PTNP 118
PP T PN ++ ICL I + W P+ +++TALV++ A + P +P
Sbjct: 66 PPKMQFSTKVWHPNISSQSGA-ICLDILK---DQWSPALTLKTALVSIQALLSAPEPKDP 121
Query: 119 NGALGSLDYKK 129
A+ + Y K
Sbjct: 122 QDAVVAEQYMK 132
>AT5G59300.1 | Symbols: UBC7, ATUBC7 | ubiquitin carrier protein 7 |
chr5:23919868-23921304 REVERSE LENGTH=203
Length = 203
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 28/152 (18%)
Query: 19 NPSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFMLLT--- 74
+P D F + L E+NIFEW I GP DT +EGG F+ + P YP PP+ +
Sbjct: 56 HPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMW 115
Query: 75 -PNGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFM------- 114
PN + ++C+SI HP E W P +V + ++++I+ +
Sbjct: 116 HPN--VYSDGRVCISIL--HPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDES 171
Query: 115 PTNPNGALGSLDYKKEERRALAIKSREASPKF 146
P N A D + E ++ ++ R++ F
Sbjct: 172 PANVEAAKEWRDKRDEFKKKVSRCVRKSQEMF 203
>AT3G46460.1 | Symbols: UBC13 | ubiquitin-conjugating enzyme 13 |
chr3:17096120-17097315 REVERSE LENGTH=166
Length = 166
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 59/122 (48%), Gaps = 30/122 (24%)
Query: 19 NPSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFML----- 72
+P D F + L E+NIFEW I GP DT +EGG F+ + P YP PP+
Sbjct: 19 HPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIW 78
Query: 73 ---LTPNGRFETQTKICLSISNHHP------------EHWQPSWSVRTALVALIAFMPTN 117
+ P+GR +C+SI HP E W P +V + ++++I+ M +
Sbjct: 79 HPNVYPDGR------VCISIL--HPPGDDPSGYELASERWTPVHTVESIMLSIIS-MLSG 129
Query: 118 PN 119
PN
Sbjct: 130 PN 131
>AT1G50490.1 | Symbols: UBC20 | ubiquitin-conjugating enzyme 20 |
chr1:18705005-18706303 REVERSE LENGTH=180
Length = 180
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 6 VKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPF 65
+KR+ E+ + + P E+NIF W+ I G DT FEG + + +YPF
Sbjct: 37 LKRLQSELMGLMMGGGPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPF 96
Query: 66 KPP--SFMLLTPNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 114
KPP F + + ICL I + W ++ VRT L+++ + +
Sbjct: 97 KPPKVKFETCCFHPNVDVYGNICLDILQ---DKWSSAYDVRTILLSIQSLL 144
>AT5G50870.2 | Symbols: UBC27 | ubiquitin-conjugating enzyme 27 |
chr5:20699626-20700998 REVERSE LENGTH=203
Length = 203
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 13/124 (10%)
Query: 8 RILQEVKEMQSN-PSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFK 66
RI +E+++ + N S P +N+ I GP T +EGG F I +P YPF+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 67 PPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM----PTNP 118
PP T PN ++ ICL I + W P+ +++TALV++ A + P +P
Sbjct: 66 PPKMQFSTKVWHPNISSQSGA-ICLDILK---DQWSPALTLKTALVSIQALLSAPEPKDP 121
Query: 119 NGAL 122
A+
Sbjct: 122 QDAV 125
>AT2G46030.1 | Symbols: UBC6 | ubiquitin-conjugating enzyme 6 |
chr2:18932243-18933421 REVERSE LENGTH=183
Length = 183
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M +P+ +R + +K M S D+ + +++ + GP D+ ++GG++ +++LP
Sbjct: 1 MASPSKRREMDMMKLMMS----DYKVDTVNDDLQMFYVTFHGPTDSLYQGGVWKIKVELP 56
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM-- 114
YP+K PS + PN E+ +CL + N + W P + + + + +
Sbjct: 57 EAYPYKSPSVGFVNKIYHPNVD-ESSGAVCLDVIN---QTWSPMFDLINVFESFLPQLLL 112
Query: 115 ---PTNP-NGALGSLDYKKEERRALAIKSREASPKFGTPE 150
P++P NG SL + +R A +K +E K+ PE
Sbjct: 113 YPNPSDPFNGEAASLLMR--DRAAYELKVKEYCEKYAKPE 150
>AT3G20060.1 | Symbols: UBC19 | ubiquitin-conjugating enzyme19 |
chr3:7002927-7004283 REVERSE LENGTH=181
Length = 181
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Query: 5 AVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYP 64
+KR+ E+ + + P E+NIF W+ I G DT FEG + + +YP
Sbjct: 37 VLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYP 96
Query: 65 FKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSVRTALVALIAFM 114
FK P T PN + ICL I + W ++ VRT L+++ + +
Sbjct: 97 FKSPKVKFETCCFHPN--VDLYGNICLDILQ---DKWSSAYDVRTILLSIQSLL 145
>AT3G55380.2 | Symbols: UBC14 | ubiquitin-conjugating enzyme 14 |
chr3:20531520-20532895 FORWARD LENGTH=201
Length = 201
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Query: 20 PSDDFMS-LPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLPAEYPFKPPSFMLLT---- 74
P D F + L E+N+F+W +I GP DT +EGG F+ + P YP PP+ +
Sbjct: 21 PVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWH 80
Query: 75 PNGRFETQTKICLSI 89
PN + K+C+SI
Sbjct: 81 PN--VYSDGKVCISI 93
>AT5G41340.1 | Symbols: UBC4, ATUBC4 | ubiquitin conjugating enzyme
4 | chr5:16538296-16539956 REVERSE LENGTH=187
Length = 187
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 20/159 (12%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M +P+ +R + +K M S D+ + + + E+ GP D+ ++GG++ R++LP
Sbjct: 1 MSSPSKRREMDMMKLMMS----DYKVETINDGMQEFYVEFNGPKDSLYQGGVWKIRVELP 56
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSV----RTALVALIA 112
YP+K PS +T PN E +CL + N + W P + + T L L+
Sbjct: 57 DAYPYKSPSVGFITKIYHPNVD-ELSGSVCLDVIN---QTWSPMFDLVNVFETFLPQLLL 112
Query: 113 F-MPTNP-NGALGSLDYKKEERRALAIKSREASPKFGTP 149
+ P++P NG +L +R A + +E K+ P
Sbjct: 113 YPNPSDPLNGEAAAL--MMRDRPAYEQRVKEYCEKYAKP 149
>AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 |
chr1:23667888-23669003 REVERSE LENGTH=185
Length = 185
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 1 MKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIFHGRIQLP 60
M +P+ +R + +K M S+ + ++ ++E E+ GP D+ +EGG++ R++LP
Sbjct: 1 MSSPSKRREMDLMKLMMSDYKVEMINDGMQEFFVEFS----GPKDSIYEGGVWKIRVELP 56
Query: 61 AEYPFKPPSFMLLT----PNGRFETQTKICLSISNHHPEHWQPSWSV----RTALVALIA 112
YP+K PS +T PN E +CL + N + W P + + T L L+
Sbjct: 57 DAYPYKSPSVGFITKIYHPNVD-EMSGSVCLDVIN---QTWSPMFDLVNVFETFLPQLLL 112
Query: 113 F-MPTNP-NGALGSL---DYKKEERRALAIKSREASPKFGTPE 150
+ P++P NG +L D E+R + A P+ T E
Sbjct: 113 YPNPSDPLNGEAAALMMRDRPTYEQRVKEYCEKYAKPRADTEE 155