Miyakogusa Predicted Gene
- Lj4g3v2265030.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2265030.1 tr|A1IIA2|A1IIA2_LOTJA Phytochrome OS=Lotus
japonicus GN=phyb PE=2 SV=1,100,0,PHYTOCHROME,Phytochrome;
His_kin_homodim,Signal transduction histidine kinase, homodimeric;
PAS,PAS ,NODE_28984_length_3818_cov_128.845734.path1.1
(1143 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B | chr2:81... 1777 0.0
AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-91994... 1702 0.0
AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-1004... 1308 0.0
AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 1177 0.0
AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-1401... 1176 0.0
AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A | c... 1092 0.0
AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduc... 73 2e-12
AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 | ch... 72 2e-12
AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 67 7e-11
AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 67 7e-11
AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE dom... 67 7e-11
AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 | chr1:948... 67 9e-11
AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 | c... 65 3e-10
AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 | ... 56 2e-07
AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 | chr5:139... 55 3e-07
AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kina... 51 4e-06
>AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | phytochrome B |
chr2:8140079-8144151 FORWARD LENGTH=1172
Length = 1172
Score = 1777 bits (4602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 842/1105 (76%), Positives = 960/1105 (86%), Gaps = 14/1105 (1%)
Query: 43 MRKAIAQYTEDARLHAVYEQSGES---FDYSHSLRVTV--ESVPEQQITAYLARIQRGGY 97
M KAI QYT DARLHAV+EQSGES FDYS SL+ T SVPEQQITAYL+RIQRGGY
Sbjct: 54 MSKAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTTTYGSSVPEQQITAYLSRIQRGGY 113
Query: 98 IQPFGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPXXXXXXXXXXFALGTDVRSLFSPS 157
IQPFGCMIAVD+ SFR++ YS+NAR+MLGI PQSVP A+GTDVRSLF+ S
Sbjct: 114 IQPFGCMIAVDESSFRIIGYSENAREMLGIMPQSVPTLEKPEI---LAMGTDVRSLFTSS 170
Query: 158 SAVLLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAG 217
S++LL++AF AREI+L+NP+WIHS+ +G+PFY ILHR+DVGVVIDLEPAR++DPALSIAG
Sbjct: 171 SSILLERAFVAREITLLNPVWIHSKNTGKPFYAILHRIDVGVVIDLEPARTEDPALSIAG 230
Query: 218 AVQSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAES 277
AVQSQKLAVRAISQLQ+LPGGD+KLLCD VV+SVR+LTGYDRVMVYKFHEDEHGEVVAES
Sbjct: 231 AVQSQKLAVRAISQLQALPGGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAES 290
Query: 278 KRADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGST 337
KR DLEPY+GLHYPATDIPQASRFLFKQNRVRMIVDC+A+PV VVQD+ L Q +CLVGST
Sbjct: 291 KRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCNATPVLVVQDDRLTQSMCLVGST 350
Query: 338 LRAPHGCHAQYMANMGSIASLVMAVIIXXXXXXXXXXXX-RSSMRLWGLVVCHHTSARCI 396
LRAPHGCH+QYMANMGSIASL MAVII RSSMRLWGLVVCHHTS+RCI
Sbjct: 351 LRAPHGCHSQYMANMGSIASLAMAVIINGNEDDGSNVASGRSSMRLWGLVVCHHTSSRCI 410
Query: 397 PFPLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSI 456
PFPLRYACEFLMQAFGLQLNMELQ+A Q EKRVLRTQTLLCDMLLRDSPAGIVTQSPSI
Sbjct: 411 PFPLRYACEFLMQAFGLQLNMELQLALQMSEKRVLRTQTLLCDMLLRDSPAGIVTQSPSI 470
Query: 457 MDLVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGAS 516
MDLVKCDGAA G YYPLGV PSE QI+D+++WLLA H DSTGLSTDSL DAGYPGA+
Sbjct: 471 MDLVKCDGAAFLYHGKYYPLGVAPSEVQIKDVVEWLLANHADSTGLSTDSLGDAGYPGAA 530
Query: 517 SLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLE 576
+LGDAVCGMAVAYIT++DFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSF+AFLE
Sbjct: 531 ALGDAVCGMAVAYITKRDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFQAFLE 590
Query: 577 VVKSRSSPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELE----LQGVDELS 632
VVKSRS PW+ AEMDAIHSLQLILRDSFKE E + + VV+ + QG+DEL
Sbjct: 591 VVKSRSQPWETAEMDAIHSLQLILRDSFKESEAAMNSKVVDGVVQPCRDMAGEQGIDELG 650
Query: 633 SVAREMVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEE 692
+VAREMVRLIETAT PIFAVD G INGWNAK++ELTGL VEEAMGKSLV DL+YKE+E
Sbjct: 651 AVAREMVRLIETATVPIFAVDAGGCINGWNAKIAELTGLSVEEAMGKSLVSDLIYKENEA 710
Query: 693 TVDRLLSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDV 752
TV++LLSRAL+G+E+KNVE+KL+TF PE Q KAV+VVVNACSSKDY NNIVGVCFVGQDV
Sbjct: 711 TVNKLLSRALRGDEEKNVEVKLKTFSPELQGKAVFVVVNACSSKDYLNNIVGVCFVGQDV 770
Query: 753 TGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIG 812
T QK+VMDKFINIQGDYKAIVHSPNPLIPPIFA+D+NTCCLEWN AMEKLTGW R++VIG
Sbjct: 771 TSQKIVMDKFINIQGDYKAIVHSPNPLIPPIFAADENTCCLEWNMAMEKLTGWSRSEVIG 830
Query: 813 KLLVGEVFGSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKR 872
K++VGEVFGSCC LKG DA+TKFMIVLHNA+GGQDTDKFPF F DR+GK+VQ LTANKR
Sbjct: 831 KMIVGEVFGSCCMLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRNGKFVQALLTANKR 890
Query: 873 VSIDGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTN 932
VS++G++IGAFCFLQI SPELQQAL VQ++Q+ CF + KELAYICQ +KNPLSG+RF N
Sbjct: 891 VSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKNPLSGMRFAN 950
Query: 933 SLLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVV 992
SLLEAT L ++QKQ LETS +CEKQ+ +I+ D+DLESIEDGS L+R EF LG+VINA+V
Sbjct: 951 SLLEATDLNEDQKQLLETSVSCEKQISRIVGDMDLESIEDGSFVLKREEFFLGSVINAIV 1010
Query: 993 SQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHV 1052
SQ M LLR+R LQLIRDIPEEIK++ V+GDQ+RIQQ+LA+FL +++RYAPS + WVEIH+
Sbjct: 1011 SQAMFLLRDRGLQLIRDIPEEIKSIEVFGDQIRIQQLLAEFLLSIIRYAPSQE-WVEIHL 1069
Query: 1053 YPKIKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKLMN 1112
KQ++DG + EFR+ CPGEGLP ELV+DMFH+SRW + EGLGL + RKILKLMN
Sbjct: 1070 SQLSKQMADGFAAIRTEFRMACPGEGLPPELVRDMFHSSRWTSPEGLGLSVCRKILKLMN 1129
Query: 1113 GEVQYIREAERCYFFVLLELPVTRR 1137
GEVQYIRE+ER YF ++LELPV R+
Sbjct: 1130 GEVQYIRESERSYFLIILELPVPRK 1154
>AT4G16250.1 | Symbols: PHYD | phytochrome D | chr4:9195602-9199486
REVERSE LENGTH=1164
Length = 1164
Score = 1702 bits (4409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 815/1101 (74%), Positives = 938/1101 (85%), Gaps = 14/1101 (1%)
Query: 45 KAIAQYTEDARLHAVYEQSGES---FDYSHSLRVTV--ESVPEQQITAYLARIQRGGYIQ 99
KAI QYT DARLHAV+EQSGES FDYS SL+ SVPEQQITAYL+RIQRGGY Q
Sbjct: 58 KAIQQYTVDARLHAVFEQSGESGKSFDYSQSLKTAPYDSSVPEQQITAYLSRIQRGGYTQ 117
Query: 100 PFGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPXXXXXXXXXXFALGTDVRSLFSPSSA 159
PFGC+IAV++ +F ++ YS+NAR+MLG+ QSVP +GTD+RSLF SS
Sbjct: 118 PFGCLIAVEESTFTIIGYSENAREMLGLMSQSVPSIEDKSEV--LTIGTDLRSLFKSSSY 175
Query: 160 VLLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGAV 219
+LL++AF AREI+L+NP+WIHS +G+PFY ILHRVDVG++IDLEPAR++DPALSIAGAV
Sbjct: 176 LLLERAFVAREITLLNPIWIHSNNTGKPFYAILHRVDVGILIDLEPARTEDPALSIAGAV 235
Query: 220 QSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESKR 279
QSQKLAVRAIS LQSLP GD+KLLCD VV+SVR+LTGYDRVMVYKFHEDEHGEVVAESKR
Sbjct: 236 QSQKLAVRAISHLQSLPSGDIKLLCDTVVESVRDLTGYDRVMVYKFHEDEHGEVVAESKR 295
Query: 280 ADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTLR 339
DLEPY+GLHYPATDIPQASRFLFKQNRVRMIVDC+ASPV VVQD+ L Q +CLVGSTLR
Sbjct: 296 NDLEPYIGLHYPATDIPQASRFLFKQNRVRMIVDCYASPVRVVQDDRLTQFICLVGSTLR 355
Query: 340 APHGCHAQYMANMGSIASLVMAVIIXXXXXXXXXXXX--RSSMRLWGLVVCHHTSARCIP 397
APHGCHAQYM NMGSIASL MAVII R+SMRLWGLVVCHHTSARCIP
Sbjct: 356 APHGCHAQYMTNMGSIASLAMAVIINGNEEDGNGVNTGGRNSMRLWGLVVCHHTSARCIP 415
Query: 398 FPLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIM 457
FPLRYACEFLMQAFGLQLNMELQ+A Q EKRVLR QTLLCDMLLRDSPAGIVTQ PSIM
Sbjct: 416 FPLRYACEFLMQAFGLQLNMELQLALQVSEKRVLRMQTLLCDMLLRDSPAGIVTQRPSIM 475
Query: 458 DLVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASS 517
DLVKC+GAA QG YYPLGVTP++SQI DI++WL+A H DSTGLSTDSL DAGYP A++
Sbjct: 476 DLVKCNGAAFLYQGKYYPLGVTPTDSQINDIVEWLVANHSDSTGLSTDSLGDAGYPRAAA 535
Query: 518 LGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEV 577
LGDAVCGMAVA IT++DFLFWFRSHT KEIKWGGAKHHPEDKDDGQRM+PRSSF+ FLEV
Sbjct: 536 LGDAVCGMAVACITKRDFLFWFRSHTEKEIKWGGAKHHPEDKDDGQRMNPRSSFQTFLEV 595
Query: 578 VKSRSSPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAV----VNTHLAELELQGVDELSS 633
VKSR PW+ AEMDAIHSLQLILRDSFKE E DSKA V H ++ QG+ E+ +
Sbjct: 596 VKSRCQPWETAEMDAIHSLQLILRDSFKESEAMDSKAAAAGAVQPHGDDMVQQGMQEIGA 655
Query: 634 VAREMVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEET 693
VAREMVRLIETAT PIFAVD++G INGWNAK++ELTGL VE+AMGKSLVR+L+YKE +ET
Sbjct: 656 VAREMVRLIETATVPIFAVDIDGCINGWNAKIAELTGLSVEDAMGKSLVRELIYKEYKET 715
Query: 694 VDRLLSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVT 753
VDRLLS ALKG+E KNVE+KL+TFG E Q KA++VVVNACSSKDY NNIVGVCFVGQDVT
Sbjct: 716 VDRLLSCALKGDEGKNVEVKLKTFGSELQGKAMFVVVNACSSKDYLNNIVGVCFVGQDVT 775
Query: 754 GQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGK 813
G K+VMDKFINIQGDYKAI+HSPNPLIPPIFA+D+NTCCLEWN AMEKLTGW R++VIGK
Sbjct: 776 GHKIVMDKFINIQGDYKAIIHSPNPLIPPIFAADENTCCLEWNTAMEKLTGWPRSEVIGK 835
Query: 814 LLVGEVFGSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTANKRV 873
LLV EVFGS C+LKG DA+TKFMIVLHNA+GGQDTDKFPF F DR G+++Q LT NKRV
Sbjct: 836 LLVREVFGSYCRLKGPDALTKFMIVLHNAIGGQDTDKFPFPFFDRKGEFIQALLTLNKRV 895
Query: 874 SIDGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNS 933
SIDG+IIGAFCFLQI SPELQQAL+VQ++QE F+R KELAYI Q +KNPLSG+RFTNS
Sbjct: 896 SIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLRFTNS 955
Query: 934 LLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVVS 993
LLE L ++QKQ LETS +CEKQ+ KI+ D+D++SI+DGS LER EF +GNV NAVVS
Sbjct: 956 LLEDMDLNEDQKQLLETSVSCEKQISKIVGDMDVKSIDDGSFLLERTEFFIGNVTNAVVS 1015
Query: 994 QVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVY 1053
QVM+++RERNLQLIR+IP E+K++AVYGDQ+R+QQVLA+FL ++VRYAP +G VE+H+
Sbjct: 1016 QVMLVVRERNLQLIRNIPTEVKSMAVYGDQIRLQQVLAEFLLSIVRYAPM-EGSVELHLC 1074
Query: 1054 PKIKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKLMNG 1113
P + Q++DG + + EFR+ C GEG+P E VQDMFH+SRW + EGLGL + RKILKLMNG
Sbjct: 1075 PTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEGLGLSVCRKILKLMNG 1134
Query: 1114 EVQYIREAERCYFFVLLELPV 1134
VQYIRE ER YF +++ELPV
Sbjct: 1135 GVQYIREFERSYFLIVIELPV 1155
>AT4G18130.1 | Symbols: PHYE | phytochrome E | chr4:10042312-10045948
REVERSE LENGTH=1112
Length = 1112
Score = 1308 bits (3384), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 639/1114 (57%), Positives = 827/1114 (74%), Gaps = 41/1114 (3%)
Query: 44 RKAIAQYTEDARLHAVYEQS---GESFDYSHSLRVTVESVPEQQITAYLARIQRGGYIQP 100
+ AQY+ DA L A + QS G+SF+YS S+ VP++ ITAYL+ IQRGG +QP
Sbjct: 19 KSNTAQYSVDAALFADFAQSIYTGKSFNYSKSVISPPNHVPDEHITAYLSNIQRGGLVQP 78
Query: 101 FGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPXXXXXXXXXXFALGTDVRSLFSPSSAV 160
FGC+IAV++PSFR+L SDN+ D LG+ +G D R+LF+PSS
Sbjct: 79 FGCLIAVEEPSFRILGLSDNSSDFLGLLSLPSTSHSGEFDKVKGLIGIDARTLFTPSSGA 138
Query: 161 LLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGAVQ 220
L KA + EISL+NP+ +HSRT+ +PFY ILHR+D G+V+DLEPA+S DPAL++AGAVQ
Sbjct: 139 SLSKAASFTEISLLNPVLVHSRTTQKPFYAILHRIDAGIVMDLEPAKSGDPALTLAGAVQ 198
Query: 221 SQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESKRA 280
SQKLAVRAIS+LQSLPGGD+ LCD VV+ V+ LTGYDRVMVY+FHED+HGEVV+E +R+
Sbjct: 199 SQKLAVRAISRLQSLPGGDIGALCDTVVEDVQRLTGYDRVMVYQFHEDDHGEVVSEIRRS 258
Query: 281 DLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTLRA 340
DLEPY+GLHYPATDIPQA+RFLFKQNRVRMI DC+A+PV VVQ E L +PLCLV STLRA
Sbjct: 259 DLEPYLGLHYPATDIPQAARFLFKQNRVRMICDCNATPVKVVQSEELKRPLCLVNSTLRA 318
Query: 341 PHGCHAQYMANMGSIASLVMAVIIXXXXXXXXXXXXRSSMRLWGLVVCHHTSARCIPFPL 400
PHGCH QYMANMGS+ASL +A+++ + S +LWGLVV HH S R +PFPL
Sbjct: 319 PHGCHTQYMANMGSVASLALAIVV----------KGKDSSKLWGLVVGHHCSPRYVPFPL 368
Query: 401 RYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLV 460
RYACEFLMQAFGLQL MELQ+A+Q EK+ +RTQTLLCDMLLRD+ + IVTQSP IMDLV
Sbjct: 369 RYACEFLMQAFGLQLQMELQLASQLAEKKAMRTQTLLCDMLLRDTVSAIVTQSPGIMDLV 428
Query: 461 KCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHG-DSTGLSTDSLADAGYPGASSLG 519
KCDGAALY +G + +GVTP+ESQ++D+++WL+ HG DSTGL+TDSL DAGYPGA SLG
Sbjct: 429 KCDGAALYYKGKCWLVGVTPNESQVKDLVNWLVENHGDDSTGLTTDSLVDAGYPGAISLG 488
Query: 520 DAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVK 579
DAVCG+A A + KD+L WFRS+TA IKWGGAKHHP+DKDD RMHPRSSF AFLEV K
Sbjct: 489 DAVCGVAAAGFSSKDYLLWFRSNTASAIKWGGAKHHPKDKDDAGRMHPRSSFTAFLEVAK 548
Query: 580 SRSSPWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELELQGVDELSSVAREMV 639
SRS PW+ +E+DAIHSL+LI+R+SF + S+ V++ + + +EL+S EMV
Sbjct: 549 SRSLPWEISEIDAIHSLRLIMRESF-----TSSRPVLSGNGVA---RDANELTSFVCEMV 600
Query: 640 RLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVDRLLS 699
R+IETATAPIF VD G INGWN K +E+TGL EAMGKSL ++V +ES ++ LL
Sbjct: 601 RVIETATAPIFGVDSSGCINGWNKKTAEMTGLLASEAMGKSLADEIVQEESRAALESLLC 660
Query: 700 RALKGEEDKNVEIKLRTFGP-EHQDKA--VYVVVNACSSKDYTNNIVGVCFVGQDVTGQK 756
+AL+GEE+K+V +KLR FG H D + V V+VN+C+S+DYT NI+GVCFVGQD+T +K
Sbjct: 661 KALQGEEEKSVMLKLRKFGQNNHPDYSSDVCVLVNSCTSRDYTENIIGVCFVGQDITSEK 720
Query: 757 VVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGKLLV 816
+ D+FI +QGDYK IV S NPLIPPIFASD+N CC EWN AMEKLTGW + +VIGK+L
Sbjct: 721 AITDRFIRLQGDYKTIVQSLNPLIPPIFASDENACCSEWNAAMEKLTGWSKHEVIGKMLP 780
Query: 817 GEVFGSCCQLKGSDAITKFMIVLHNALGGQDTDKFPFS----FLDRHGKYVQTFLTANKR 872
GEVFG C++K D++TKF+I L+ + G D P S F ++ GKY++ LTANK
Sbjct: 781 GEVFGVFCKVKCQDSLTKFLISLYQGIAG---DNVPESSLVEFFNKEGKYIEASLTANKS 837
Query: 873 VSIDGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTN 932
+I+G++I F FLQI++ E + K+ ++ + EL Y+ QE+KNPL+GIRF +
Sbjct: 838 TNIEGKVIRCFFFLQIINKESGLSCPELKESAQS----LNELTYVRQEIKNPLNGIRFAH 893
Query: 933 SLLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVV 992
LLE++ ++ Q+QFLETS ACEKQ+ II DL+SIE+G L+LE EF L N+++ ++
Sbjct: 894 KLLESSEISASQRQFLETSDACEKQITTIIESTDLKSIEEGKLQLETEEFRLENILDTII 953
Query: 993 SQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHV 1052
SQVM++LRERN QL ++ EEIKTL + GD++++Q +LAD L N+V +AP P+ WV I +
Sbjct: 954 SQVMIILRERNSQLRVEVAEEIKTLPLNGDRVKLQLILADLLRNIVNHAPFPNSWVGISI 1013
Query: 1053 YPKIKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHN-SRWVTQEGLGLCMSRKILKLM 1111
P + D +H +FR++ PG+GLPSE++ DMF WVT +GLGL +SRK+L+ M
Sbjct: 1014 SPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDGLGLKLSRKLLEQM 1073
Query: 1112 NGEVQYIREAERCYFFVLLE----LPVTRRSSKG 1141
NG V Y+RE ERC+F V L+ L V R ++G
Sbjct: 1074 NGRVSYVREDERCFFQVDLQVKTMLGVESRGTEG 1107
>AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3099216 REVERSE LENGTH=1122
Length = 1122
Score = 1177 bits (3046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 585/1107 (52%), Positives = 778/1107 (70%), Gaps = 19/1107 (1%)
Query: 45 KAIAQYTEDARLHAVYEQSGESFDYSHSLRVT---VESVP---EQQITAYLARIQRGGYI 98
+ IAQ T DA+LHA +E+SG SFDYS S+RVT VE+ P ++ T YL IQ+G I
Sbjct: 21 RIIAQTTVDAKLHADFEESGSSFDYSTSVRVTGPVVENQPPRSDKVTTTYLHHIQKGKLI 80
Query: 99 QPFGCMIAVDDPSFRLLAYSDNARDMLGITPQSVPXXXXXXXXXXFALGTDVRSLFSPSS 158
QPFGC++A+D+ +F+++AYS+NA ++L + +VP +GTD+RSLF+ S
Sbjct: 81 QPFGCLLALDEKTFKVIAYSENASELLTMASHAVPSVGEHPV---LGIGTDIRSLFTAPS 137
Query: 159 AVLLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGA 218
A L KA ++SL+NP+ +H RTS +PFY I+HRV ++ID EP + + ++ AGA
Sbjct: 138 ASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIIDFEPVKPYEVPMTAAGA 197
Query: 219 VQSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESK 278
+QS KLA +AI++LQSLP G ++ LCD +VQ V ELTGYDRVM YKFHED+HGEVV+E
Sbjct: 198 LQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAYKFHEDDHGEVVSEVT 257
Query: 279 RADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTL 338
+ LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC+A V+QDE L L L GSTL
Sbjct: 258 KPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQDEKLSFDLTLCGSTL 317
Query: 339 RAPHGCHAQYMANMGSIASLVMAVIIXXXX----XXXXXXXXRSSMRLWGLVVCHHTSAR 394
RAPH CH QYMANM SIASLVMAV++ + RLWGLVVCH+T+ R
Sbjct: 318 RAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQKRKRLWGLVVCHNTTPR 377
Query: 395 CIPFPLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSP 454
+PFPLRYACEFL Q F + +N E+++ Q +EK +LRTQTLLCDML+RD+P GIV+QSP
Sbjct: 378 FVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLCDMLMRDAPLGIVSQSP 437
Query: 455 SIMDLVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPG 514
+IMDLVKCDGAAL + + LG TPSE +++I WL +H DSTGLSTDSL DAG+P
Sbjct: 438 NIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDSTGLSTDSLHDAGFPR 497
Query: 515 ASSLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAF 574
A SLGD+VCGMA I+ KD +FWFRSHTA E++WGGAKH P+D+DD +RMHPRSSFKAF
Sbjct: 498 ALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDRDDARRMHPRSSFKAF 557
Query: 575 LEVVKSRSSPWDNAEMDAIHSLQLILRDSFKEDEHSD-SKAVVNTHLAELELQGVDELSS 633
LEVVK+RS PW + EMDAIHSLQLILR++FK+ E +D + V+ + L +L++ G+ EL +
Sbjct: 558 LEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYSKLNDLKIDGIQELEA 617
Query: 634 VAREMVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEET 693
V EMVRLIETAT PI AVD +G +NGWN K++ELTGL V+EA+GK + LV S E
Sbjct: 618 VTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIGKHFL-TLVEDSSVEI 676
Query: 694 VDRLLSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVT 753
V R+L AL+G E++NV+ +++T + +VVNAC+S+D N+VGVCFV D+T
Sbjct: 677 VKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDLHENVVGVCFVAHDLT 736
Query: 754 GQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGK 813
GQK VMDKF I+GDYKAI+ +PNPLIPPIF +D+ C EWN AM KLTG R +VI K
Sbjct: 737 GQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPAMSKLTGLKREEVIDK 796
Query: 814 LLVGEVFG---SCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSFLDRHGKYVQTFLTAN 870
+L+GEVFG SCC+LK +A IVL+NA+ QD +K F+F R GKYV+ L +
Sbjct: 797 MLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAFFTRGGKYVECLLCVS 856
Query: 871 KRVSIDGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRF 930
K++ +G + G FCFLQ+ S ELQQAL VQ+ E+ R+K LAYI ++++NPLSGI F
Sbjct: 857 KKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIMF 916
Query: 931 TNSLLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINA 990
T ++E T L EQ++ L+TSA C+KQ+ KI+ D DLESI +G L+LE EF L V+ A
Sbjct: 917 TRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCLDLEMKEFTLNEVLTA 976
Query: 991 VVSQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEI 1050
SQVM+ +++++ + EE+ + +YGD +R+QQVLADF+ V + PS G + +
Sbjct: 977 STSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFMLMAVNFTPS-GGQLTV 1035
Query: 1051 HVYPKIKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMSRKILKL 1110
+ Q+ + L + E RL G G+P L+ MF V++EGL L +SRK++KL
Sbjct: 1036 SASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDVSEEGLSLMVSRKLVKL 1095
Query: 1111 MNGEVQYIREAERCYFFVLLELPVTRR 1137
MNG+VQY+R+A + F + EL +
Sbjct: 1096 MNGDVQYLRQAGKSSFIITAELAAANK 1122
>AT5G35840.1 | Symbols: PHYC | phytochrome C | chr5:14008049-14011619
FORWARD LENGTH=1111
Length = 1111
Score = 1176 bits (3041), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 571/1099 (51%), Positives = 784/1099 (71%), Gaps = 21/1099 (1%)
Query: 48 AQYTEDARLHAVYEQSGESFDYSHSLRVTVES----VPEQQITAYLARIQRGGYIQPFGC 103
+Q DA+LH +E+S FDYS S+ + + S +P ++ YL +IQRG IQPFGC
Sbjct: 21 SQVLVDAKLHGNFEESERLFDYSASINLNMPSSSCEIPSSAVSTYLQKIQRGMLIQPFGC 80
Query: 104 MIAVDDPSFRLLAYSDNARDMLGITPQSVPXXXXXXXXXXFALGTDVRSLFSPSSAVLLD 163
+I VD+ + +++A+S+N ++MLG+ P +VP +GTDV+SLF L+
Sbjct: 81 LIVVDEKNLKVIAFSENTQEMLGLIPHTVPSMEQREA---LTIGTDVKSLFLSPGCSALE 137
Query: 164 KAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDLEPARSDDPALSIAGAVQSQK 223
KA EIS++NP+ +H R+S +PFY ILHR++ G+VIDLEP D+ ++ AGA++S K
Sbjct: 138 KAVDFGEISILNPITLHCRSSSKPFYAILHRIEEGLVIDLEPVSPDEVPVTAAGALRSYK 197
Query: 224 LAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVYKFHEDEHGEVVAESKRADLE 283
LA ++IS+LQ+LP G++ LLCDA+V+ V ELTGYDRVMVYKFHED HGEV+AE R D+E
Sbjct: 198 LAAKSISRLQALPSGNMLLLCDALVKEVSELTGYDRVMVYKFHEDGHGEVIAECCREDME 257
Query: 284 PYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQDEALMQPLCLVGSTLRAPHG 343
PY+GLHY ATDIPQASRFLF +N+VRMI DC A PV VVQD++L QP+ L GSTLRAPHG
Sbjct: 258 PYLGLHYSATDIPQASRFLFMRNKVRMICDCSAVPVKVVQDKSLSQPISLSGSTLRAPHG 317
Query: 344 CHAQYMANMGSIASLVMAVIIXXXXXXXXXXXXRSSMRLWGLVVCHHTSARCIPFPLRYA 403
CHAQYM+NMGS+ASLVM+V I ++ LWGLVVCHH S R +PFPLRYA
Sbjct: 318 CHAQYMSNMGSVASLVMSVTINGSDSDEMNRDLQTGRHLWGLVVCHHASPRFVPFPLRYA 377
Query: 404 CEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCDMLLRDSPAGIVTQSPSIMDLVKCD 463
CEFL Q FG+Q+N E + A EKR+L+TQ++LCDML R++P GIVTQSP+IMDLVKCD
Sbjct: 378 CEFLTQVFGVQINKEAESAVLLKEKRILQTQSVLCDMLFRNAPIGIVTQSPNIMDLVKCD 437
Query: 464 GAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDSTGLSTDSLADAGYPGASSLGDAVC 523
GAALY + + + LGVTP+E+QIRD+IDW+L HG +TG +T+SL ++GYP AS LG+++C
Sbjct: 438 GAALYYRDNLWSLGVTPTETQIRDLIDWVLKSHGGNTGFTTESLMESGYPDASVLGESIC 497
Query: 524 GMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDKDDGQRMHPRSSFKAFLEVVKSRSS 583
GMA YI+EKDFLFWFRS TAK+IKWGGA+H P D+ DG+RMHPRSSFKAF+E+V+ +S
Sbjct: 498 GMAAVYISEKDFLFWFRSSTAKQIKWGGARHDPNDR-DGKRMHPRSSFKAFMEIVRWKSV 556
Query: 584 PWDNAEMDAIHSLQLILRDSFKEDEHSDSKAVVNTHLAELELQGVDELSSVAREMVRLIE 643
PWD+ EMDAI+SLQLI++ S +E EH SK VV+ L + +Q VDEL + EMVRLI+
Sbjct: 557 PWDDMEMDAINSLQLIIKGSLQE-EH--SKTVVDVPLVDNRVQKVDELCVIVNEMVRLID 613
Query: 644 TATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMGKSLVRDLVYKESEETVDRLLSRALK 703
TA PIFAVD G INGWN+K +E+TGL VE+A+GK V DLV +S ETV +L+ AL+
Sbjct: 614 TAAVPIFAVDASGVINGWNSKAAEVTGLAVEQAIGKP-VSDLVEDDSVETVKNMLALALE 672
Query: 704 GEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDYTNNIVGVCFVGQDVTGQKVVMDKFI 763
G E++ EI++R FGP+ + V +VVN C S+D TNN++GVCF+GQDVTGQK + + +
Sbjct: 673 GSEERGAEIRIRAFGPKRKSSPVELVVNTCCSRDMTNNVLGVCFIGQDVTGQKTLTENYS 732
Query: 764 NIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNAMEKLTGWGRADVIGKLLVGEVFGS- 822
++GDY I+ SP+ LIPPIF +++N C EWNNAM+KL+G R +V+ K+L+GEVF +
Sbjct: 733 RVKGDYARIMWSPSTLIPPIFITNENGVCSEWNNAMQKLSGIKREEVVNKILLGEVFTTD 792
Query: 823 ---CCQLKGSDAITKFMIVLHNALGGQ-DTDKFPFSFLDRHGKYVQTFLTANKRVSIDGQ 878
CC LK D +TK I + + GQ + +K F F R G +++ L+ANKR I+G+
Sbjct: 793 DYGCC-LKDHDTLTKLRIGFNAVISGQKNIEKLLFGFYHRDGSFIEALLSANKRTDIEGK 851
Query: 879 IIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEAT 938
+ G CFLQ+ SPELQ AL+VQ+ E + +LAY+ EVK+P I F LL ++
Sbjct: 852 VTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKAISFLQDLLHSS 911
Query: 939 GLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSLELERGEFLLGNVINAVVSQVMVL 998
GL+++QK+ L TS C +Q+ K+I D D+E IE+G +EL+ EF L + AVV QVM L
Sbjct: 912 GLSEDQKRLLRTSVLCREQLAKVISDSDIEGIEEGYVELDCSEFGLQESLEAVVKQVMEL 971
Query: 999 LRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGW-VEIHVYPKIK 1057
ER +Q+ D P+E+ ++ +YGD LR+QQ+L++ L + +R+ P+ G V V +I+
Sbjct: 972 SIERKVQISCDYPQEVSSMRLYGDNLRLQQILSETLLSSIRFTPALRGLCVSFKVIARIE 1031
Query: 1058 QISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSR-WVTQEGLGLCMSRKILKLMN-GEV 1115
I + + EFR++ P GLP +LV++MF R ++EGLGL +++K++KLM G +
Sbjct: 1032 AIGKRMKRVELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTL 1091
Query: 1116 QYIREAERCYFFVLLELPV 1134
+Y+RE+E F +L E P+
Sbjct: 1092 RYLRESEMSAFVILTEFPL 1110
>AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | phytochrome A |
chr1:3095498-3098892 REVERSE LENGTH=1014
Length = 1014
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/1002 (53%), Positives = 709/1002 (70%), Gaps = 10/1002 (0%)
Query: 144 FALGTDVRSLFSPSSAVLLDKAFAAREISLMNPLWIHSRTSGRPFYGILHRVDVGVVIDL 203
+GTD+RSLF+ SA L KA ++SL+NP+ +H RTS +PFY I+HRV ++ID
Sbjct: 15 LGIGTDIRSLFTAPSASALQKALGFGDVSLLNPILVHCRTSAKPFYAIIHRVTGSIIIDF 74
Query: 204 EPARSDDPALSIAGAVQSQKLAVRAISQLQSLPGGDVKLLCDAVVQSVRELTGYDRVMVY 263
EP + + ++ AGA+QS KLA +AI++LQSLP G ++ LCD +VQ V ELTGYDRVM Y
Sbjct: 75 EPVKPYEVPMTAAGALQSYKLAAKAITRLQSLPSGSMERLCDTMVQEVFELTGYDRVMAY 134
Query: 264 KFHEDEHGEVVAESKRADLEPYMGLHYPATDIPQASRFLFKQNRVRMIVDCHASPVGVVQ 323
KFHED+HGEVV+E + LEPY+GLHYPATDIPQA+RFLF +N+VRMIVDC+A V+Q
Sbjct: 135 KFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCNAKHARVLQ 194
Query: 324 DEALMQPLCLVGSTLRAPHGCHAQYMANMGSIASLVMAVIIXXXX----XXXXXXXXRSS 379
DE L L L GSTLRAPH CH QYMANM SIASLVMAV++ +
Sbjct: 195 DEKLSFDLTLCGSTLRAPHSCHLQYMANMDSIASLVMAVVVNEEDGEGDAPDATTQPQKR 254
Query: 380 MRLWGLVVCHHTSARCIPFPLRYACEFLMQAFGLQLNMELQMAAQSLEKRVLRTQTLLCD 439
RLWGLVVCH+T+ R +PFPLRYACEFL Q F + +N E+++ Q +EK +LRTQTLLCD
Sbjct: 255 KRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKEVELDNQMVEKNILRTQTLLCD 314
Query: 440 MLLRDSPAGIVTQSPSIMDLVKCDGAALYCQGSYYPLGVTPSESQIRDIIDWLLAFHGDS 499
ML+RD+P GIV+QSP+IMDLVKCDGAAL + + LG TPSE +++I WL +H DS
Sbjct: 315 MLMRDAPLGIVSQSPNIMDLVKCDGAALLYKDKIWKLGTTPSEFHLQEIASWLCEYHMDS 374
Query: 500 TGLSTDSLADAGYPGASSLGDAVCGMAVAYITEKDFLFWFRSHTAKEIKWGGAKHHPEDK 559
TGLSTDSL DAG+P A SLGD+VCGMA I+ KD +FWFRSHTA E++WGGAKH P+D+
Sbjct: 375 TGLSTDSLHDAGFPRALSLGDSVCGMAAVRISSKDMIFWFRSHTAGEVRWGGAKHDPDDR 434
Query: 560 DDGQRMHPRSSFKAFLEVVKSRSSPWDNAEMDAIHSLQLILRDSFKEDEHSD-SKAVVNT 618
DD +RMHPRSSFKAFLEVVK+RS PW + EMDAIHSLQLILR++FK+ E +D + V+ +
Sbjct: 435 DDARRMHPRSSFKAFLEVVKTRSLPWKDYEMDAIHSLQLILRNAFKDSETTDVNTKVIYS 494
Query: 619 HLAELELQGVDELSSVAREMVRLIETATAPIFAVDVEGHINGWNAKVSELTGLPVEEAMG 678
L +L++ G+ EL +V EMVRLIETAT PI AVD +G +NGWN K++ELTGL V+EA+G
Sbjct: 495 KLNDLKIDGIQELEAVTSEMVRLIETATVPILAVDSDGLVNGWNTKIAELTGLSVDEAIG 554
Query: 679 KSLVRDLVYKESEETVDRLLSRALKGEEDKNVEIKLRTFGPEHQDKAVYVVVNACSSKDY 738
K + LV S E V R+L AL+G E++NV+ +++T + +VVNAC+S+D
Sbjct: 555 KHFL-TLVEDSSVEIVKRMLENALEGTEEQNVQFEIKTHLSRADAGPISLVVNACASRDL 613
Query: 739 TNNIVGVCFVGQDVTGQKVVMDKFINIQGDYKAIVHSPNPLIPPIFASDDNTCCLEWNNA 798
N+VGVCFV D+TGQK VMDKF I+GDYKAI+ +PNPLIPPIF +D+ C EWN A
Sbjct: 614 HENVVGVCFVAHDLTGQKTVMDKFTRIEGDYKAIIQNPNPLIPPIFGTDEFGWCTEWNPA 673
Query: 799 MEKLTGWGRADVIGKLLVGEVFG---SCCQLKGSDAITKFMIVLHNALGGQDTDKFPFSF 855
M KLTG R +VI K+L+GEVFG SCC+LK +A IVL+NA+ QD +K F+F
Sbjct: 674 MSKLTGLKREEVIDKMLLGEVFGTQKSCCRLKNQEAFVNLGIVLNNAVTSQDPEKVSFAF 733
Query: 856 LDRHGKYVQTFLTANKRVSIDGQIIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELA 915
R GKYV+ L +K++ +G + G FCFLQ+ S ELQQAL VQ+ E+ R+K LA
Sbjct: 734 FTRGGKYVECLLCVSKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALA 793
Query: 916 YICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQMLKIIRDVDLESIEDGSL 975
YI ++++NPLSGI FT ++E T L EQ++ L+TSA C+KQ+ KI+ D DLESI +G L
Sbjct: 794 YIKRQIRNPLSGIMFTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSDLESIIEGCL 853
Query: 976 ELERGEFLLGNVINAVVSQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLS 1035
+LE EF L V+ A SQVM+ +++++ + EE+ + +YGD +R+QQVLADF+
Sbjct: 854 DLEMKEFTLNEVLTASTSQVMMKSNGKSVRITNETGEEVMSDTLYGDSIRLQQVLADFML 913
Query: 1036 NVVRYAPSPDGWVEIHVYPKIKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVT 1095
V + PS G + + + Q+ + L + E RL G G+P L+ MF V+
Sbjct: 914 MAVNFTPS-GGQLTVSASLRKDQLGRSVHLANLEIRLTHTGAGIPEFLLNQMFGTEEDVS 972
Query: 1096 QEGLGLCMSRKILKLMNGEVQYIREAERCYFFVLLELPVTRR 1137
+EGL L +SRK++KLMNG+VQY+R+A + F + EL +
Sbjct: 973 EEGLSLMVSRKLVKLMNGDVQYLRQAGKSSFIITAELAAANK 1014
>AT1G66340.1 | Symbols: ETR1, EIN1, ETR, AtETR1 | Signal transduction
histidine kinase, hybrid-type, ethylene sensor |
chr1:24734698-24737366 FORWARD LENGTH=738
Length = 738
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 23/234 (9%)
Query: 900 QKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQML 959
+++ E AR LA + E++ P+ I +SLL+ T LT EQ+ +ET +
Sbjct: 334 RREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLA 393
Query: 960 KIIRDV-DLESIEDGSLELERGEF----LLGNVINAVVSQVMVLLRERNLQLIRDIPEEI 1014
++ DV DL +EDGSL+LE G F L V+N + +V L L D+PE
Sbjct: 394 TLMNDVLDLSRLEDGSLQLELGTFNLHTLFREVLNLIKPIAVVKKLPITLNLAPDLPE-- 451
Query: 1015 KTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVYPKIKQISDGLTL-----LHAE 1069
V GD+ R+ Q++ + + N V+++ V V + +D + +
Sbjct: 452 ---FVVGDEKRLMQIILNIVGNAVKFSKQGSISVTALVTKSDTRAADFFVVPTGSHFYLR 508
Query: 1070 FRLVCPGEGLPSELVQDMFHN--------SRWVTQEGLGLCMSRKILKLMNGEV 1115
++ G G+ + + +F +R GLGL +S++ + LM G +
Sbjct: 509 VKVKDSGAGINPQDIPKIFTKFAQTQSLATRSSGGSGLGLAISKRFVNLMEGNI 562
>AT5G10720.1 | Symbols: AHK5, CKI2, HK5 | histidine kinase 5 |
chr5:3386835-3390541 FORWARD LENGTH=922
Length = 922
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 119/248 (47%), Gaps = 27/248 (10%)
Query: 914 LAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQMLKIIRDV-DLESIED 972
LA + E+++PLSG+ +L T L EQ+Q L + +L++I D+ DL +E
Sbjct: 371 LATMSHEIRSPLSGVVGMAEILSTTKLDKEQRQLLNVMISSGDLVLQLINDILDLSKVES 430
Query: 973 GSLELERGEFLLGNVINAVVSQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLAD 1032
G + LE +F V+ V+ L+ ++L L +I +++ + V GD LRI+Q+L +
Sbjct: 431 GVMRLEATKFRPREVVKHVLQTAAASLK-KSLTLEGNIADDV-PIEVVGDVLRIRQILTN 488
Query: 1033 FLSNVVRYAPSPDGWVEIHVYPKIKQISDGL----TLLHAEFRL------VC-----PGE 1077
+SN +++ + +++ V + + D T H + L +C G
Sbjct: 489 LISNAIKFTHEGNVGIKLQVISEPSFVRDNALNADTEEHEQNGLTETSVWICCDVWDTGI 548
Query: 1078 GLPSELVQDMFH--------NSRWVTQEGLGLCMSRKILKLMNGEVQYI-REAERCYFFV 1128
G+P + +F ++R GLGL + +++++LM G++ R +E F
Sbjct: 549 GIPENALPCLFKKYMQASADHARKYGGTGLGLAICKQLVELMGGQLTVTSRVSEGSTFTF 608
Query: 1129 LLELPVTR 1136
+L V R
Sbjct: 609 ILPYKVGR 616
>AT2G01830.1 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 879 IIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEAT 938
+ GA + V + + +++ + E A+ + LA + E++ P++GI ++L T
Sbjct: 419 LYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDT 478
Query: 939 GLTDEQKQFLETSAACEKQMLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMV 997
L+ Q+ + +T+ C K ++ +I +V D IE G LELE F + ++++ V+S
Sbjct: 479 ELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSE 538
Query: 998 LLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVYPKIK 1057
R ++++L + +++ + V GD R +Q++ + + N V++ +V++H+ + K
Sbjct: 539 ESRNKSIELAVFVSDKVPEI-VKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSK 597
Query: 1058 QISD 1061
S+
Sbjct: 598 DESE 601
>AT2G01830.3 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-367429
REVERSE LENGTH=1057
Length = 1057
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 879 IIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEAT 938
+ GA + V + + +++ + E A+ + LA + E++ P++GI ++L T
Sbjct: 419 LYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDT 478
Query: 939 GLTDEQKQFLETSAACEKQMLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMV 997
L+ Q+ + +T+ C K ++ +I +V D IE G LELE F + ++++ V+S
Sbjct: 479 ELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSE 538
Query: 998 LLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVYPKIK 1057
R ++++L + +++ + V GD R +Q++ + + N V++ +V++H+ + K
Sbjct: 539 ESRNKSIELAVFVSDKVPEI-VKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSK 597
Query: 1058 QISD 1061
S+
Sbjct: 598 DESE 601
>AT2G01830.2 | Symbols: WOL, CRE1, WOL1, AHK4, ATCRE1 | CHASE domain
containing histidine kinase protein | chr2:363332-368016
REVERSE LENGTH=1080
Length = 1080
Score = 67.0 bits (162), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 98/184 (53%), Gaps = 2/184 (1%)
Query: 879 IIGAFCFLQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEAT 938
+ GA + V + + +++ + E A+ + LA + E++ P++GI ++L T
Sbjct: 442 LYGAAMHIVKVEDDFHEMQELKVRAEAADVAKSQFLATVSHEIRTPMNGILGMLAMLLDT 501
Query: 939 GLTDEQKQFLETSAACEKQMLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMV 997
L+ Q+ + +T+ C K ++ +I +V D IE G LELE F + ++++ V+S
Sbjct: 502 ELSSTQRDYAQTAQVCGKALIALINEVLDRAKIEAGKLELESVPFDIRSILDDVLSLFSE 561
Query: 998 LLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVYPKIK 1057
R ++++L + +++ + V GD R +Q++ + + N V++ +V++H+ + K
Sbjct: 562 ESRNKSIELAVFVSDKVPEI-VKGDSGRFRQIIINLVGNSVKFTEKGHIFVKVHLAEQSK 620
Query: 1058 QISD 1061
S+
Sbjct: 621 DESE 624
>AT1G27320.1 | Symbols: AHK3, HK3 | histidine kinase 3 |
chr1:9487780-9492027 FORWARD LENGTH=1036
Length = 1036
Score = 66.6 bits (161), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 100/202 (49%), Gaps = 6/202 (2%)
Query: 898 KVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQ 957
+++K+ E A+ + LA + E++ P++G+ +L T L Q+ ++ T+ A K
Sbjct: 439 QLKKKAEAADVAKSQFLATVSHEIRTPMNGVLGMLHMLMDTELDVTQQDYVRTAQASGKA 498
Query: 958 MLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMVLLRERNLQLIRDIPEEIKT 1016
++ +I +V D IE G LELE F L +++ V+S +++ ++L I + +
Sbjct: 499 LVSLINEVLDQAKIESGKLELEEVRFDLRGILDDVLSLFSSKSQQKGVELAVYISDRVPD 558
Query: 1017 LAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEIHVYPKIKQISDGLTLLHAEFRLVCPG 1076
+ + GD R +Q+L + + N +++ +V +H+ ++ + DG T E L
Sbjct: 559 MLI-GDPGRFRQILTNLMGNSIKFTEKGHIFVTVHLVDELFESIDGETASSPESTL---- 613
Query: 1077 EGLPSELVQDMFHNSRWVTQEG 1098
GLP Q + N + + G
Sbjct: 614 SGLPVADRQRSWENFKAFSSNG 635
>AT2G17820.1 | Symbols: ATHK1, AHK1, HK1 | histidine kinase 1 |
chr2:7743133-7748013 REVERSE LENGTH=1207
Length = 1207
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 89/185 (48%), Gaps = 16/185 (8%)
Query: 880 IGAFCFLQIVS---------PELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSG-IR 929
IG C L + + EL + L +++ E + + + LA + E++ P++ I
Sbjct: 460 IGCVCILILTNGVSKEMKLRAELIRQLDARRRAEASSNYKSQFLANMSHELRTPMAAVIG 519
Query: 930 FTNSLLEATGLTDEQKQFLETSAACEKQMLKIIRDV-DLESIEDGSLELERGEFLLGNVI 988
+ L+ L++EQ + C +L+++ ++ DL +E G L LE EF LG +
Sbjct: 520 LLDILISDDCLSNEQYATVTQIRKCSTALLRLLNNILDLSKVESGKLVLEEAEFDLGREL 579
Query: 989 NAVVSQVMVLLRERNLQLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPD--- 1045
+V V N++ + D+ +++ L V GD R+ Q+ A+ +SN +++ +
Sbjct: 580 EGLVDMFSVQCINHNVETVLDLSDDMPAL-VRGDSARLVQIFANLISNSIKFTTTGHIIL 638
Query: 1046 -GWVE 1049
GW E
Sbjct: 639 RGWCE 643
>AT2G40940.1 | Symbols: ERS1, ERS | ethylene response sensor 1 |
chr2:17084635-17086819 REVERSE LENGTH=613
Length = 613
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 4/154 (2%)
Query: 898 KVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAACEKQ 957
K +++ E AR LA + E++ P+ I +SLL T L+ EQ+ +ET
Sbjct: 332 KARQEAEMAVHARNDFLAVMNHEMRTPMHAIISLSSLLLETELSPEQRVMIETILKSSNL 391
Query: 958 MLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMVLLRERNLQLIRDIPEEIKT 1016
+ +I DV DL +EDGSL LE F L + V+S + + + L + ++ T
Sbjct: 392 VATLISDVLDLSRLEDGSLLLENEPFSLQAIFEEVISLIKPIASVKKLSTNLILSADLPT 451
Query: 1017 LAVYGDQLRIQQVLADFLSNVVRYAPSPDGWVEI 1050
A+ GD+ R+ Q + + + N V++ + +G++ I
Sbjct: 452 YAI-GDEKRLMQTILNIMGNAVKF--TKEGYISI 482
>AT5G35750.1 | Symbols: AHK2, HK2 | histidine kinase 2 |
chr5:13911743-13916337 REVERSE LENGTH=1176
Length = 1176
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 103/224 (45%), Gaps = 11/224 (4%)
Query: 886 LQIVSPELQQALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQK 945
+ V + Q+ +++ + E A+ + LA + E++ P++G+ +L T L +Q
Sbjct: 564 IATVEEDCQKMRELKARAEAADIAKSQFLATVSHEIRTPMNGVLGMLKMLMDTDLDAKQM 623
Query: 946 QFLETSAACEKQMLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMVLLRERNL 1004
+ +T+ K + +I +V D IE G LELE F + +++ V S + E+ +
Sbjct: 624 DYAQTAHGSGKDLTSLINEVLDQAKIESGRLELENVPFDMRFILDNVSSLLSGKANEKGI 683
Query: 1005 QLIRDIPEEIKTLAVYGDQLRIQQVLADFLSNVVRYAPSPDG-WVEIHVYPKIKQ---IS 1060
+L + ++ + V GD R +Q++ + + N +++ ++ +H+ ++K+ I
Sbjct: 684 ELAVYVSSQVPDVVV-GDPSRFRQIITNLVGNSIKFTQERGHIFISVHLADEVKEPLTIE 742
Query: 1061 DGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRWVTQEGLGLCMS 1104
D +L L C G E V + W + + C S
Sbjct: 743 DA--VLKQRLALGCSESG---ETVSGFPAVNAWGSWKNFKTCYS 781
>AT2G47430.1 | Symbols: CKI1 | Signal transduction histidine kinase |
chr2:19459167-19463122 REVERSE LENGTH=1122
Length = 1122
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/288 (21%), Positives = 111/288 (38%), Gaps = 69/288 (23%)
Query: 895 QALKVQKQQEKNCFARMKELAYICQEVKNPLSGIRFTNSLLEATGLTDEQKQFLETSAAC 954
QA + A MK L IC++ P S + T L C
Sbjct: 398 QAFANASHDIRGALAGMKGLIDICRDGVKPGSDVDTT----------------LNQVNVC 441
Query: 955 EKQMLKIIRDV-DLESIEDGSLELERGEFLLGNVINAVVSQVMVLLRERNLQLIRDIPEE 1013
K ++ ++ V D+ IE G ++L +F L ++ V+ + ++ + ++ D P +
Sbjct: 442 AKDLVALLNSVLDMSKIESGKMQLVEEDFNLSKLLEDVIDFYHPVAMKKGVDVVLD-PHD 500
Query: 1014 ---IKTLAVYGDQLRIQQVLADFLSNVVRYA-------------PSPDGWVEIHVYPK-- 1055
K V GD R++Q+L + +SN V++ P + V + YPK
Sbjct: 501 GSVFKFSNVRGDSGRLKQILNNLVSNAVKFTVDGHIAVRAWAQRPGSNSSVVLASYPKGV 560
Query: 1056 ----------------------IKQISDGLTLLHAEFRLVCPGEGLPSELVQDMFHNSRW 1093
I + + F + G+G+P E+ + +F N
Sbjct: 561 SKFVKSMFCKNKEESSTYETEISNSIRNNANTMEFVFEVDDTGKGIPMEMRKSVFENYVQ 620
Query: 1094 VTQE-------GLGLCMSRKILKLMNGEVQY----IREAERCYFFVLL 1130
V + GLGL + + +++LM GE++ + E C+ F +L
Sbjct: 621 VRETAQGHQGTGLGLGIVQSLVRLMGGEIRITDKAMGEKGTCFQFNVL 668