Miyakogusa Predicted Gene

Lj4g3v2252440.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2252440.2 Non Chatacterized Hit- tr|H9GCT9|H9GCT9_ANOCA
Uncharacterized protein (Fragment) OS=Anolis
carolinen,32.59,3e-17,seg,NULL; BUCENTAUR RELATED,NULL;
BCNT,Craniofacial development protein 1/Bucentaur;
coiled-coil,NUL,CUFF.50586.2
         (255 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G30490.2 | Symbols:  | FUNCTIONS IN: molecular_function unkno...   187   6e-48
AT5G30490.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Craniofaci...   187   6e-48

>AT5G30490.2 | Symbols:  | FUNCTIONS IN: molecular_function unknown;
           INVOLVED IN: biological_process unknown; LOCATED IN:
           cellular_component unknown; EXPRESSED IN: 22 plant
           structures; EXPRESSED DURING: 13 growth stages; CONTAINS
           InterPro DOMAIN/s: Craniofacial development protein
           1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to
           324 proteins in 149 species: Archae - 0; Bacteria - 18;
           Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0;
           Other Eukaryotes - 53 (source: NCBI BLink). |
           chr5:11612199-11614271 FORWARD LENGTH=236
          Length = 236

 Score =  187 bits (475), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/241 (47%), Positives = 152/241 (63%), Gaps = 21/241 (8%)

Query: 21  GPSVEAKQDDTGGEVKAQVDAMWEQMNKGVSSKTLNSFTNXXXXXXXXXXXXXXXNWMSY 80
           G   ++ +++    V  +V  +W++MN+GV +K +N  +                NW SY
Sbjct: 2   GSHEQSPENNGSSTVSKKVADIWQRMNEGVPNKRVNFVSTALPAKNSANS-----NWKSY 56

Query: 81  LGLAPIGNEPHGSAASQIGPGVLQNSENDEAKKNSXXXXXXXXXXXXXXXXXXXXXTSSA 140
           LG   +  +   +  S +   VL +S ++EAK  +                      +++
Sbjct: 57  LG---VNVKKKDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTA-------AAAS 106

Query: 141 GRGKVVITEVRDFAGQEIEIKKLLDADSKEASERA------KAPAPSRVDAVLEQIKKKQ 194
            RGK+ ITEV+DFAGQEIE+K+L++ADSKEA ER        + APS VDAVLEQIKKKQ
Sbjct: 107 SRGKIEITEVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQ 166

Query: 195 KLSVLDKTKKDWGEYKEENKGLEDELDAYKKSSNQYLDKVNFLQRTDYREFERERDARLA 254
           KLSVLDKTKKDWGEYKEE+KG+EDELD YKKSS+QYLDKV FL+R DYR+FE+ERDARLA
Sbjct: 167 KLSVLDKTKKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLA 226

Query: 255 L 255
           L
Sbjct: 227 L 227


>AT5G30490.1 | Symbols:  | CONTAINS InterPro DOMAIN/s: Craniofacial
           development protein 1/Bucentaur (InterPro:IPR011421);
           Has 333 Blast hits to 324 proteins in 149 species:
           Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96;
           Plants - 49; Viruses - 0; Other Eukaryotes - 53 (source:
           NCBI BLink). | chr5:11612199-11614271 FORWARD LENGTH=236
          Length = 236

 Score =  187 bits (475), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/241 (47%), Positives = 152/241 (63%), Gaps = 21/241 (8%)

Query: 21  GPSVEAKQDDTGGEVKAQVDAMWEQMNKGVSSKTLNSFTNXXXXXXXXXXXXXXXNWMSY 80
           G   ++ +++    V  +V  +W++MN+GV +K +N  +                NW SY
Sbjct: 2   GSHEQSPENNGSSTVSKKVADIWQRMNEGVPNKRVNFVSTALPAKNSANS-----NWKSY 56

Query: 81  LGLAPIGNEPHGSAASQIGPGVLQNSENDEAKKNSXXXXXXXXXXXXXXXXXXXXXTSSA 140
           LG   +  +   +  S +   VL +S ++EAK  +                      +++
Sbjct: 57  LG---VNVKKKDTCVSDVQKSVLNHSCSEEAKSIAAAALAAVRNATVTA-------AAAS 106

Query: 141 GRGKVVITEVRDFAGQEIEIKKLLDADSKEASERA------KAPAPSRVDAVLEQIKKKQ 194
            RGK+ ITEV+DFAGQEIE+K+L++ADSKEA ER        + APS VDAVLEQIKKKQ
Sbjct: 107 SRGKIEITEVKDFAGQEIEVKRLVEADSKEALERGNKGSSSSSAAPSAVDAVLEQIKKKQ 166

Query: 195 KLSVLDKTKKDWGEYKEENKGLEDELDAYKKSSNQYLDKVNFLQRTDYREFERERDARLA 254
           KLSVLDKTKKDWGEYKEE+KG+EDELD YKKSS+QYLDKV FL+R DYR+FE+ERDARLA
Sbjct: 167 KLSVLDKTKKDWGEYKEEHKGVEDELDKYKKSSDQYLDKVGFLERADYRQFEKERDARLA 226

Query: 255 L 255
           L
Sbjct: 227 L 227