Miyakogusa Predicted Gene

Lj4g3v2250360.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250360.1 tr|B1GYI0|B1GYI0_NICSY Domains rearranged
methyltransferase (Fragment) OS=Nicotiana sylvestris
GN=dr,40.65,3e-18,no description,NULL;
S-adenosyl-L-methionine-dependent methyltransferases,NULL; DNA
(CYTOSINE-5-)-ME,CUFF.50714.1
         (317 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17310.1 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de...   343   1e-94
AT3G17310.2 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de...   343   1e-94
AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged methyltra...   277   6e-75
AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 | c...   259   2e-69

>AT3G17310.1 | Symbols: DRM3, AtDRM3 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:5909294-5912838 REVERSE
           LENGTH=710
          Length = 710

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 165/319 (51%), Positives = 214/319 (67%), Gaps = 8/319 (2%)

Query: 3   AKRPFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHI 62
           A+RP+F YG +  +S   W K+S FL+G+ PE V+ +L SAL R EGY+HNLP  NRF+ 
Sbjct: 391 ARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLPTVNRFNT 450

Query: 63  LPKPPMTIEDVLPRTKKWWPPWDSRKQLSCINCET-RGVAQLCDRLGKFLADSGGVPSSE 121
           LP P +TI+D +P  + WWP WD RK  +   C   +    LC+R+G+ +A+  G P+ +
Sbjct: 451 LPNPRLTIQDAMPHMRSWWPQWDIRKHFNSGTCSNMKDATLLCERIGRRIAECKGKPTQQ 510

Query: 122 QQRDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCFQ 181
            Q  ILR+C   NL+W     L P+EPEHLE I+GYP NH       LAERLK   YCFQ
Sbjct: 511 DQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRLAERLKLFDYCFQ 570

Query: 182 TDTLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILER 241
           TDTLGYHLSVLK +FP GLT+LSLFSGIGGAEIAL RLGI +K +VSVE+    R IL+R
Sbjct: 571 TDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKR 630

Query: 242 WWRSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR-------GGESIAS 294
           WW++SGQTG LVQIEEI+ LT+K+L++L+ + GGFD VI Q+PS                
Sbjct: 631 WWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKEISNSEACE 690

Query: 295 VDFSVFHECVRVLHRVRGL 313
            D+++F+E  RV  RVR +
Sbjct: 691 FDYTLFNEFARVTKRVRDM 709


>AT3G17310.2 | Symbols: DRM3, AtDRM3 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:5909294-5912838 REVERSE
           LENGTH=710
          Length = 710

 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 165/319 (51%), Positives = 214/319 (67%), Gaps = 8/319 (2%)

Query: 3   AKRPFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHI 62
           A+RP+F YG +  +S   W K+S FL+G+ PE V+ +L SAL R EGY+HNLP  NRF+ 
Sbjct: 391 ARRPYFFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLPTVNRFNT 450

Query: 63  LPKPPMTIEDVLPRTKKWWPPWDSRKQLSCINCET-RGVAQLCDRLGKFLADSGGVPSSE 121
           LP P +TI+D +P  + WWP WD RK  +   C   +    LC+R+G+ +A+  G P+ +
Sbjct: 451 LPNPRLTIQDAMPHMRSWWPQWDIRKHFNSGTCSNMKDATLLCERIGRRIAECKGKPTQQ 510

Query: 122 QQRDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCFQ 181
            Q  ILR+C   NL+W     L P+EPEHLE I+GYP NH       LAERLK   YCFQ
Sbjct: 511 DQTLILRHCHTSNLIWIAPNILSPLEPEHLECIMGYPMNHTNIGGGRLAERLKLFDYCFQ 570

Query: 182 TDTLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILER 241
           TDTLGYHLSVLK +FP GLT+LSLFSGIGGAEIAL RLGI +K +VSVE+    R IL+R
Sbjct: 571 TDTLGYHLSVLKSMFPQGLTVLSLFSGIGGAEIALDRLGIHLKGVVSVESCGLSRNILKR 630

Query: 242 WWRSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR-------GGESIAS 294
           WW++SGQTG LVQIEEI+ LT+K+L++L+ + GGFD VI Q+PS                
Sbjct: 631 WWQTSGQTGELVQIEEIKSLTAKRLETLMQRFGGFDFVICQNPSTPLDLSKEISNSEACE 690

Query: 295 VDFSVFHECVRVLHRVRGL 313
            D+++F+E  RV  RVR +
Sbjct: 691 FDYTLFNEFARVTKRVRDM 709


>AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged
           methyltransferase 2 | chr5:4715429-4718578 REVERSE
           LENGTH=626
          Length = 626

 Score =  277 bits (709), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 147/321 (45%), Positives = 193/321 (60%), Gaps = 10/321 (3%)

Query: 1   MAAKRPFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRF 60
           +A   PFF Y NVA      W  +S+ L+ + PEFV+++ F    R  GYIHNLP+ NRF
Sbjct: 302 LARGPPFFYYENVALTPKGVWETISRHLFEIPPEFVDSKYFCVAARKRGYIHNLPINNRF 361

Query: 61  HILPKPPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFLADSGGVPSS 120
            I P P  TI D  P +K+WWP WD R +L+CI   T G AQL +R+   L      P  
Sbjct: 362 QIQPPPKYTIHDAFPLSKRWWPEWDKRTKLNCILTCT-GSAQLTNRIRVALEPYNEEPEP 420

Query: 121 EQ--QRDILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKY 178
            +  QR ++  C+  NLVW GK K  P+EP+ +E ILG+P NH         ER KSL  
Sbjct: 421 PKHVQRYVIDQCKKWNLVWVGKNKAAPLEPDEMESILGFPKNHTRGGGMSRTERFKSLGN 480

Query: 179 CFQTDTLGYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRI 238
            FQ DT+ YHLSVLKP+FP G+ +LSLF+GIGG E+ALHRL IK+K +VSVE S+  R I
Sbjct: 481 SFQVDTVAYHLSVLKPIFPHGINVLSLFTGIGGGEVALHRLQIKMKLVVSVEISKVNRNI 540

Query: 239 LERWWRSSGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR--GGESIASVD 296
           L+ +W  + QTG L++  +IQ LT+  ++ L+ K GGFDLVI  SP     GG  ++ V 
Sbjct: 541 LKDFWEQTNQTGELIEFSDIQHLTNDTIEGLMEKYGGFDLVIGGSPCNNLAGGNRVSRVG 600

Query: 297 F-----SVFHECVRVLHRVRG 312
                 S+F E  R+L  VR 
Sbjct: 601 LEGDQSSLFFEYCRILEVVRA 621


>AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 |
           chr5:4991347-4994826 FORWARD LENGTH=624
          Length = 624

 Score =  259 bits (662), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 188/319 (58%), Gaps = 8/319 (2%)

Query: 6   PFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPK 65
           PFF Y NVA      W K+S  LY + PEFV+++ F A  R  GYIHNLP++NRF I P 
Sbjct: 305 PFFYYENVAMTPKGVWAKISSHLYDIVPEFVDSKHFCAAARKRGYIHNLPIQNRFQIQPP 364

Query: 66  PPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRLGKFLADSGGVPSSEQQRD 125
              TI++  P TK+WWP WD R +L+C+       ++L +++ + L    G    + Q+ 
Sbjct: 365 QHNTIQEAFPLTKRWWPSWDGRTKLNCL-LTCIASSRLTEKIREALERYDGETPLDVQKW 423

Query: 126 ILRYCRGLNLVWTGKYKLGPVEPEHLELILGYPSNHVGSVESDLAERLKSLKYCFQTDTL 185
           ++  C+  NLVW GK KL P++ + +E +LG+P +H         +R KSL   FQ DT+
Sbjct: 424 VMYECKKWNLVWVGKNKLAPLDADEMEKLLGFPRDHTRGGGISTTDRYKSLGNSFQVDTV 483

Query: 186 GYHLSVLKPVFPSGLTMLSLFSGIGGAEIALHRLGIKIKALVSVETSEKKRRILERWWRS 245
            YHLSVLKP+FP+G+ +LSLF+GIGG E+ALHRL IK+  +VSVE S+  R IL  +W  
Sbjct: 484 AYHLSVLKPLFPNGINVLSLFTGIGGGEVALHRLQIKMNVVVSVEISDANRNILRSFWEQ 543

Query: 246 SGQTGTLVQIEEIQKLTSKKLQSLISKLGGFDLVIYQSPSPR--GGESIASVDF-----S 298
           + Q G L + +++QKL    ++ L+ + GGFDLVI  SP     GG     V       S
Sbjct: 544 TNQKGILREFKDVQKLDDNTIERLMDEYGGFDLVIGGSPCNNLAGGNRHHRVGLGGEHSS 603

Query: 299 VFHECVRVLHRVRGLCERM 317
           +F +  R+L  VR     M
Sbjct: 604 LFFDYCRILEAVRRKARHM 622