Miyakogusa Predicted Gene

Lj4g3v2250350.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2250350.2 Non Chatacterized Hit- tr|D8S568|D8S568_SELML
Putative uncharacterized protein OS=Selaginella
moelle,43.12,1e-17,seg,NULL; DNA (CYTOSINE-5-)-METHYLTRANSFERASE
3-RELATED,NULL,CUFF.50713.2
         (528 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G17310.1 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de...   243   3e-64
AT3G17310.2 | Symbols: DRM3, AtDRM3 | S-adenosyl-L-methionine-de...   243   3e-64
AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged methyltra...   113   3e-25
AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 | c...   105   6e-23

>AT3G17310.1 | Symbols: DRM3, AtDRM3 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:5909294-5912838 REVERSE
           LENGTH=710
          Length = 710

 Score =  243 bits (620), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 170/530 (32%), Positives = 248/530 (46%), Gaps = 100/530 (18%)

Query: 40  PYTTTFSRDVGDNVASSSGSKLRSFFIGMGFLPSLVDKVIEENGEGNSDTLLEILLRSAR 99
           P  T+F + +GDN ASSSGS ++S  I MGF P+LV K I+ENG+ + + LLEIL +S  
Sbjct: 35  PCDTSFPQQIGDNAASSSGSNVKSLLIEMGFCPTLVQKAIDENGQDDFELLLEILTKSTE 94

Query: 100 KSNGDSSDFLEGSLNTSKGRRSAPSVCPAGHSKEXXXXXXXXXXXXXXXXXXXXXXPEIS 159
                                      P G                          P   
Sbjct: 95  TE-------------------------PPG--------------------------PSFH 103

Query: 160 MVNQPKEEVGELDDVIDDKRGSLLRMNFSLEEVEFAINRLGDEASIPELVDFIFAAQIAK 219
            + +PK E  +++   D  R +LL M F    V+FA++RLG +  I E+VDFI AAQ+A+
Sbjct: 104 GLMEPKPE-PDIEYETDRIRIALLTMKFPENLVDFALDRLGKDTPIDEMVDFIVAAQLAE 162

Query: 220 KMKRETDD------------DVICYDSRN-EVSHEKLYGIMAKTLYLLEMGFSESEVSSA 266
           K   E++D            DV    +R  EV +E+L+  M KTL LLEMGFS  E+S A
Sbjct: 163 KYAEESEDSLDGAEINEEDEDVTPVTARGPEVPNEQLFETMDKTLRLLEMGFSNDEISMA 222

Query: 267 VDKLGPEAPISELANFIFAEQ---------NGIDYVMEYKYPWIKEEQHSDMY------- 310
           ++K+G +  IS LA  I   +           I+  +    P +     S  +       
Sbjct: 223 IEKIGTKGQISVLAESIVTGEFPAECHDDLEDIEKKVSAAAPAVNRTCLSKSWRFVGVGA 282

Query: 311 -----------DTAEVKPEDFSDEPSQSRQVNLEETYNGKRVKEEGIDEIPNAVSDMGYF 359
                       TA +KP+   +        N+ ET  GKR K+E  +  P   +  GY 
Sbjct: 283 QKEDGGGGSSSGTANIKPDPGIESFPFPATDNVGETSRGKRPKDEDENAYPEEYT--GY- 339

Query: 360 DLAENDRGKRPKYEYXXXXXXXXXPYWVEEKVDSVVARMSQLNKSNPSRSLNSMAAKRPF 419
               +DRGKR + E            W++++          + +   S+SL    A+RP+
Sbjct: 340 ----DDRGKRLRPEDMGDSSSFMETPWMQDEWKDNTYEFPSVMQPRLSQSLGPKVARRPY 395

Query: 420 FLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPKPP 479
           F YG +  +S   W K+S FL+G+ PE V+ +L SAL R EGY+HNLP  NRF+ LP P 
Sbjct: 396 FFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLPTVNRFNTLPNPR 455

Query: 480 MTIEDVLPRTKKWWPPWDSRKQLSCINCET-RGVAQLCDRLGKFLADSGG 528
           +TI+D +P  + WWP WD RK  +   C   +    LC+R+G+ +A+  G
Sbjct: 456 LTIQDAMPHMRSWWPQWDIRKHFNSGTCSNMKDATLLCERIGRRIAECKG 505


>AT3G17310.2 | Symbols: DRM3, AtDRM3 |
           S-adenosyl-L-methionine-dependent methyltransferases
           superfamily protein | chr3:5909294-5912838 REVERSE
           LENGTH=710
          Length = 710

 Score =  243 bits (620), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 170/530 (32%), Positives = 248/530 (46%), Gaps = 100/530 (18%)

Query: 40  PYTTTFSRDVGDNVASSSGSKLRSFFIGMGFLPSLVDKVIEENGEGNSDTLLEILLRSAR 99
           P  T+F + +GDN ASSSGS ++S  I MGF P+LV K I+ENG+ + + LLEIL +S  
Sbjct: 35  PCDTSFPQQIGDNAASSSGSNVKSLLIEMGFCPTLVQKAIDENGQDDFELLLEILTKSTE 94

Query: 100 KSNGDSSDFLEGSLNTSKGRRSAPSVCPAGHSKEXXXXXXXXXXXXXXXXXXXXXXPEIS 159
                                      P G                          P   
Sbjct: 95  TE-------------------------PPG--------------------------PSFH 103

Query: 160 MVNQPKEEVGELDDVIDDKRGSLLRMNFSLEEVEFAINRLGDEASIPELVDFIFAAQIAK 219
            + +PK E  +++   D  R +LL M F    V+FA++RLG +  I E+VDFI AAQ+A+
Sbjct: 104 GLMEPKPE-PDIEYETDRIRIALLTMKFPENLVDFALDRLGKDTPIDEMVDFIVAAQLAE 162

Query: 220 KMKRETDD------------DVICYDSRN-EVSHEKLYGIMAKTLYLLEMGFSESEVSSA 266
           K   E++D            DV    +R  EV +E+L+  M KTL LLEMGFS  E+S A
Sbjct: 163 KYAEESEDSLDGAEINEEDEDVTPVTARGPEVPNEQLFETMDKTLRLLEMGFSNDEISMA 222

Query: 267 VDKLGPEAPISELANFIFAEQ---------NGIDYVMEYKYPWIKEEQHSDMY------- 310
           ++K+G +  IS LA  I   +           I+  +    P +     S  +       
Sbjct: 223 IEKIGTKGQISVLAESIVTGEFPAECHDDLEDIEKKVSAAAPAVNRTCLSKSWRFVGVGA 282

Query: 311 -----------DTAEVKPEDFSDEPSQSRQVNLEETYNGKRVKEEGIDEIPNAVSDMGYF 359
                       TA +KP+   +        N+ ET  GKR K+E  +  P   +  GY 
Sbjct: 283 QKEDGGGGSSSGTANIKPDPGIESFPFPATDNVGETSRGKRPKDEDENAYPEEYT--GY- 339

Query: 360 DLAENDRGKRPKYEYXXXXXXXXXPYWVEEKVDSVVARMSQLNKSNPSRSLNSMAAKRPF 419
               +DRGKR + E            W++++          + +   S+SL    A+RP+
Sbjct: 340 ----DDRGKRLRPEDMGDSSSFMETPWMQDEWKDNTYEFPSVMQPRLSQSLGPKVARRPY 395

Query: 420 FLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPKPP 479
           F YG +  +S   W K+S FL+G+ PE V+ +L SAL R EGY+HNLP  NRF+ LP P 
Sbjct: 396 FFYGQLGELSPSWWSKISGFLFGIHPEHVDTRLCSALRRTEGYLHNLPTVNRFNTLPNPR 455

Query: 480 MTIEDVLPRTKKWWPPWDSRKQLSCINCET-RGVAQLCDRLGKFLADSGG 528
           +TI+D +P  + WWP WD RK  +   C   +    LC+R+G+ +A+  G
Sbjct: 456 LTIQDAMPHMRSWWPQWDIRKHFNSGTCSNMKDATLLCERIGRRIAECKG 505


>AT5G14620.1 | Symbols: DRM2, DMT7 | domains rearranged
           methyltransferase 2 | chr5:4715429-4718578 REVERSE
           LENGTH=626
          Length = 626

 Score =  113 bits (282), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 53/112 (47%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 408 RSLNSMAAKRPFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLP 467
           RSL  +A   PFF Y NVA      W  +S+ L+ + PEFV+++ F    R  GYIHNLP
Sbjct: 297 RSLPELARGPPFFYYENVALTPKGVWETISRHLFEIPPEFVDSKYFCVAARKRGYIHNLP 356

Query: 468 VENRFHILPKPPMTIEDVLPRTKKWWPPWDSRKQLSCINCETRGVAQLCDRL 519
           + NRF I P P  TI D  P +K+WWP WD R +L+CI   T G AQL +R+
Sbjct: 357 INNRFQIQPPPKYTIHDAFPLSKRWWPEWDKRTKLNCILTCT-GSAQLTNRI 407


>AT5G15380.1 | Symbols: DRM1 | domains rearranged methylase 1 |
           chr5:4991347-4994826 FORWARD LENGTH=624
          Length = 624

 Score =  105 bits (263), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 44/88 (50%), Positives = 57/88 (64%)

Query: 418 PFFLYGNVANISYDSWVKLSQFLYGVEPEFVNNQLFSALNRIEGYIHNLPVENRFHILPK 477
           PFF Y NVA      W K+S  LY + PEFV+++ F A  R  GYIHNLP++NRF I P 
Sbjct: 305 PFFYYENVAMTPKGVWAKISSHLYDIVPEFVDSKHFCAAARKRGYIHNLPIQNRFQIQPP 364

Query: 478 PPMTIEDVLPRTKKWWPPWDSRKQLSCI 505
              TI++  P TK+WWP WD R +L+C+
Sbjct: 365 QHNTIQEAFPLTKRWWPSWDGRTKLNCL 392