Miyakogusa Predicted Gene
- Lj4g3v2249140.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2249140.1 Non Chatacterized Hit- tr|K4CCJ0|K4CCJ0_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,23.91,2e-18,PPR_2,Pentatricopeptide repeat;
PPR_3,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat;
SUBFAM,CUFF.50564.1
(494 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 681 0.0
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 340 2e-93
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 316 3e-86
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 173 3e-43
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 172 3e-43
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 8e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 142 5e-34
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 140 3e-33
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 139 3e-33
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 137 1e-32
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 4e-32
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 8e-32
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 134 2e-31
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 132 8e-31
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 3e-30
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 129 4e-30
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 129 6e-30
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 6e-30
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 128 1e-29
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 1e-29
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 3e-29
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 126 3e-29
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 125 5e-29
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 5e-29
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 9e-29
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 123 3e-28
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 122 5e-28
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 6e-28
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 119 6e-27
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 119 7e-27
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 8e-27
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 118 1e-26
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 116 3e-26
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 3e-26
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 5e-26
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 6e-26
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 7e-26
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 115 8e-26
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 114 2e-25
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 114 2e-25
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 114 2e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 114 2e-25
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 2e-25
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 113 2e-25
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 113 3e-25
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 112 8e-25
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 9e-25
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 111 9e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 111 1e-24
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 110 2e-24
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 4e-24
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 109 5e-24
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 7e-24
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 108 9e-24
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 9e-24
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 108 1e-23
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 1e-23
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 2e-23
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 3e-23
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 4e-23
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 106 4e-23
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 6e-23
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 105 9e-23
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 104 1e-22
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 104 1e-22
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 103 2e-22
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 2e-22
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 3e-22
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 103 3e-22
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 7e-22
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 1e-21
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 2e-21
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 5e-21
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 5e-21
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 99 7e-21
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 9e-21
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 98 1e-20
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 98 2e-20
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 2e-20
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 3e-20
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 96 8e-20
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 96 8e-20
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 95 9e-20
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 95 1e-19
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 3e-19
AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 93 4e-19
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 91 2e-18
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 3e-18
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 3e-18
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 90 4e-18
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 89 5e-18
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 5e-18
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 6e-18
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 9e-18
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 1e-17
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 88 2e-17
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 87 2e-17
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 2e-17
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 9e-17
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 85 1e-16
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 2e-16
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 4e-16
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 5e-16
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 6e-16
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 6e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 7e-16
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 82 1e-15
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 2e-15
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 3e-15
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 80 4e-15
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 80 4e-15
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 7e-15
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 3e-14
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 76 5e-14
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 76 5e-14
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 76 5e-14
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 7e-14
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 8e-14
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 9e-14
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 74 2e-13
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 2e-13
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 4e-13
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 72 8e-13
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 70 3e-12
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 70 3e-12
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 5e-12
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 7e-12
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 7e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 69 1e-11
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 68 1e-11
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 1e-11
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 68 2e-11
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 67 2e-11
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 7e-11
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 8e-11
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 8e-11
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 9e-11
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 64 3e-10
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 63 4e-10
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 63 4e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 63 4e-10
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 63 5e-10
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 5e-10
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 6e-10
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 7e-10
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 9e-10
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 62 1e-09
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 62 1e-09
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 61 2e-09
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 61 2e-09
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 61 2e-09
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 61 2e-09
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 4e-09
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 60 5e-09
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 5e-09
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 59 5e-09
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 6e-09
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G48000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 7e-09
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 8e-09
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 1e-08
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 1e-08
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 58 1e-08
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 58 2e-08
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 2e-08
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 57 4e-08
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 4e-08
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 56 5e-08
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 56 5e-08
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 6e-08
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 7e-08
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 9e-08
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 55 1e-07
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 1e-07
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 55 2e-07
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 54 2e-07
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 54 2e-07
AT2G17033.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT2G17033.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 2e-07
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 3e-07
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 54 3e-07
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 54 3e-07
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 54 3e-07
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 4e-07
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 5e-07
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 7e-07
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 52 7e-07
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 7e-07
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 8e-07
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 52 8e-07
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 8e-07
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 9e-07
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 9e-07
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 9e-07
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 52 1e-06
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 52 1e-06
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 2e-06
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 51 2e-06
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 51 2e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 2e-06
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 2e-06
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 3e-06
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 50 3e-06
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 50 4e-06
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 50 5e-06
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 6e-06
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 6e-06
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 8e-06
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 8e-06
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 49 9e-06
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 681 bits (1758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/455 (70%), Positives = 379/455 (83%), Gaps = 4/455 (0%)
Query: 37 VTHCAISSPPSKTAP-PVVKKKHWKRGEFPGTSEPGSTRKGGPIXXXXXXXXXXXXXXXW 95
+ C +++ SK++P V KK+ WK GEFPG +EP + R+ PI W
Sbjct: 31 IVRCVLAA--SKSSPGSVTKKRLWKDGEFPGITEPVNQRRT-PIKNVKKKLDRRSKANGW 87
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
VNTVTE LS+ I KKQWLQALEVFDML+E +FY+PKEGTYMKL+VLLGKSGQP+RA++LF
Sbjct: 88 VNTVTETLSDLIAKKQWLQALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLF 147
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M+EEG +P+ E YTALLAAY RSNL+D+AFSIL++MK+ P CQPDVFTYSTL+K CVD
Sbjct: 148 DEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSFPQCQPDVFTYSTLLKACVD 207
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
A +FDLV+ LY++M R I PNTVTQNIVLSGYG+ G+FDQMEKVLS ML ST+CKPDVW
Sbjct: 208 ASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVW 267
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
TMN I+SVFGNMG+IDMME WYEKFRNFGIEPETRTFNILIG+YGKKRMYDKMS+VMEYM
Sbjct: 268 TMNIILSVFGNMGKIDMMESWYEKFRNFGIEPETRTFNILIGSYGKKRMYDKMSSVMEYM 327
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
RKL+FPWTTSTYNN+IEAF DVGDAKNME TFDQMR+EGMKAD+KTFCCLING+ANAGLF
Sbjct: 328 RKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAGLF 387
Query: 396 HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
HKVIS+VQLA KFEI ENT FYNAV+SAC KA+DL+EMERV+ RMK+ QC D T+ IM
Sbjct: 388 HKVISSVQLAAKFEIPENTAFYNAVISACAKADDLIEMERVYIRMKERQCVCDSRTFEIM 447
Query: 456 IEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPED 490
+EAY KEGMNDKIYYLEQE++ ++ + + E+
Sbjct: 448 VEAYEKEGMNDKIYYLEQERQKLMDRTVATKEMEN 482
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 172/392 (43%), Positives = 233/392 (59%)
Query: 98 TVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTT 157
TV E L ERI +W A++VF++L+E +Y+P G Y+KLIV+LGK QP +A +LF
Sbjct: 116 TVLESLHERITALRWESAIQVFELLREQLWYKPNVGIYVKLIVMLGKCKQPEKAHELFQE 175
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF 217
MI EGC + E YTAL++AY RS D AF++L MK+ CQPDV TYS LIK + F
Sbjct: 176 MINEGCVVNHEVYTALVSAYSRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVF 235
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
FD V+ L DM + I PNT+T N ++ YGKA F +ME L ML CKPD WTM
Sbjct: 236 AFDKVQDLLSDMRRQGIRPNTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTM 295
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
N+ + FG GQI+MME YEKF++ GIEP RTFNIL+ +YGK Y KMS VMEYM+K
Sbjct: 296 NSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQK 355
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
+ WT TYN VI+AF GD K MEY F M++E + T C L+ + A K
Sbjct: 356 YHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADK 415
Query: 398 VISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
+ ++ E +I + F+N ++ A + E EM+ V + M+ PD TY M++
Sbjct: 416 IGGVLRFIENSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVK 475
Query: 458 AYRKEGMNDKIYYLEQEKKTMITDGIKVSQPE 489
AYR GM + L +++ + V +P+
Sbjct: 476 AYRISGMTTHVKELHGVVESVGEAQVVVKKPD 507
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 316 bits (809), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/389 (40%), Positives = 242/389 (62%), Gaps = 3/389 (0%)
Query: 95 WVNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
W V E L E I++ +W AL++F++L++ +YEP+ TY KL +LG QP +A L
Sbjct: 107 WPKAVLEALDEAIKENRWQSALKIFNLLRKQHWYEPRCKTYTKLFKVLGNCKQPDQASLL 166
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
F M+ EG P+ + YT+L++ Y +S LLD+AFS L MK+ C+PDVFT++ LI C
Sbjct: 167 FEVMLSEGLKPTIDVYTSLISVYGKSELLDKAFSTLEYMKSVSDCKPDVFTFTVLISCCC 226
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
+FDLV+ + +M+ + +TVT N ++ GYGKAG F++ME VL+ M+E PDV
Sbjct: 227 KLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDV 286
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
T+N+II +GN + ME WY +F+ G++P+ TFNILI ++GK MY KM +VM++
Sbjct: 287 CTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDF 346
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
M K F TT TYN VIE F G + M+ F +M+ +G+K +S T+C L+N ++ AGL
Sbjct: 347 MEKRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGL 406
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTI 454
K+ S ++ ++ +T F+N +++A +A DL M+ ++ +M++ +C PD T+
Sbjct: 407 VVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFAT 466
Query: 455 MIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
MI+ Y G+ D + LE K MI+ I
Sbjct: 467 MIKTYTAHGIFDAVQELE---KQMISSDI 492
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 172/353 (48%), Gaps = 5/353 (1%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+WLQ LEVF +++ +Y P G Y KLI ++GK GQ A LF+ M GC P Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 171 TALLAAYC----RSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
AL+ A+ ++ L++ L++MK CQP+V TY+ L++ + K D V L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+D+ + P+ T N V+ YGK G +ME VL+ M S CKPD+ T N +I +G
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 290
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
+ + ME+ ++ +P TFN +I YGK RM DK V + M + + + T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
Y +I + G F+++ + T ++ + GL+ + A
Sbjct: 351 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 410
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
F + + + Y + A TKA+ +++ + K+M+ + P+ + +E +
Sbjct: 411 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 5/230 (2%)
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
++ GK+ K+ Q +V M + PD + +ISV G GQ M + + +N
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 303 FGIEPETRTFNILIGAY----GKKRMYDKMSTVMEYMRKLQFPW-TTSTYNNVIEAFTDV 357
G P+ +N LI A+ K + +K+ ++ M+ ++ TYN ++ AF
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFY 417
G + F + + D TF +++ + G+ ++ + + E + +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 418 NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
N ++ + K ++ +ME+ FK + ++ P T+ MI Y K M DK
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 172/353 (48%), Gaps = 5/353 (1%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+WLQ LEVF +++ +Y P G Y KLI ++GK GQ A LF+ M GC P Y
Sbjct: 112 KWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVY 171
Query: 171 TALLAAYC----RSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
AL+ A+ ++ L++ L++MK CQP+V TY+ L++ + K D V L+
Sbjct: 172 NALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALF 231
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+D+ + P+ T N V+ YGK G +ME VL+ M S CKPD+ T N +I +G
Sbjct: 232 KDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM-RSNECKPDIITFNVLIDSYGK 290
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
+ + ME+ ++ +P TFN +I YGK RM DK V + M + + + T
Sbjct: 291 KQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFIT 350
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
Y +I + G F+++ + T ++ + GL+ + A
Sbjct: 351 YECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNAS 410
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
F + + + Y + A TKA+ +++ + K+M+ + P+ + +E +
Sbjct: 411 AFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEKDGIVPNKRFFLEALEVF 463
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 101/230 (43%), Gaps = 5/230 (2%)
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
++ GK+ K+ Q +V M + PD + +ISV G GQ M + + +N
Sbjct: 102 LLFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKN 161
Query: 303 FGIEPETRTFNILIGAY----GKKRMYDKMSTVMEYMRKLQFPW-TTSTYNNVIEAFTDV 357
G P+ +N LI A+ K + +K+ ++ M+ ++ TYN ++ AF
Sbjct: 162 SGCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQS 221
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFY 417
G + F + + D TF +++ + G+ ++ + + E + +
Sbjct: 222 GKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITF 281
Query: 418 NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
N ++ + K ++ +ME+ FK + ++ P T+ MI Y K M DK
Sbjct: 282 NVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDK 331
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 162/354 (45%), Gaps = 3/354 (0%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E F LK YEP TY L+ + GK+G A + M E C TY L
Sbjct: 299 EAKEFFAELKSCG-YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+AAY R+ EA ++ EM P+ TY+T+I A K D L+ M
Sbjct: 358 VAAYVRAGFSKEAAGVI-EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAG 416
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+PNT T N VLS GK + ++M K+L M +S C P+ T NT++++ GN G +
Sbjct: 417 CVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM-KSNGCSPNRATWNTMLALCGNKGMDKFV 475
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ + + ++ G EP+ TFN LI AYG+ S + M + F +TYN ++ A
Sbjct: 476 NRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNA 535
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
GD ++ E M+++G K ++ ++ +A G + + ++ +I +
Sbjct: 536 LARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPS 595
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+L A K L ER F K + PD + M+ + + M D+
Sbjct: 596 WMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQ 649
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 136/277 (49%), Gaps = 2/277 (0%)
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK-FDQMEKV 260
DV Y+T++ K++ L+E M P VT N++L +GK G+ + ++ V
Sbjct: 209 DVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGV 268
Query: 261 LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
L M S K D +T +T++S G + ++++ + ++ G EP T T+N L+ +G
Sbjct: 269 LDEM-RSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFG 327
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
K +Y + +V++ M + P + TYN ++ A+ G +K + M +G+ ++
Sbjct: 328 KAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAI 387
Query: 381 TFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
T+ +I+ + AG + + ++ NT YNAVLS K EM ++ M
Sbjct: 388 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDM 447
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
K N C P+ T+ M+ +GM+ + + +E K+
Sbjct: 448 KSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKS 484
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/334 (21%), Positives = 143/334 (42%), Gaps = 2/334 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T+ ++ L G G ++F M G +P +T+ L++AY R +A +
Sbjct: 454 PNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
EM V TY+ L+ + E + DM ++ P + +++L Y
Sbjct: 514 YGEMTRAGF-NACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYA 572
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
K G + +E++ + + E P + T++ + E+ + F+ G +P+
Sbjct: 573 KGGNYLGIERIENRIKEG-QIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDM 631
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
FN ++ + + MYD+ ++E +R+ TYN++++ + G+ E
Sbjct: 632 VIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKT 691
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
+ +K D ++ +I GF GL + + + + I YN +S T
Sbjct: 692 LEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGM 751
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E+E V + M N C P++ T+ ++++ Y + G
Sbjct: 752 FAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAG 785
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/392 (21%), Positives = 160/392 (40%), Gaps = 42/392 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A V +M+ + P TY +I GK+G+ A +LF +M E GC P+ TY A+
Sbjct: 369 EAAGVIEMMTKKGVM-PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAV 427
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L+ + + +E +L +MK++ C P+ T++T++ C + V ++ +M +
Sbjct: 428 LSLLGKKSRSNEMIKMLCDMKSNG-CSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCG 486
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES--TSCKPDVWTMNTIISVFGNMGQID 291
P+ T N ++S YG+ G K+ M + +C V T N +++ G
Sbjct: 487 FEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNAC---VTTYNALLNALARKGDWR 543
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ-FP-WTT----- 344
E ++ G +P ++++++ Y K Y + + +++ Q FP W
Sbjct: 544 SGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLL 603
Query: 345 ----------------------------STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
+N+++ FT E + +R +G+
Sbjct: 604 LANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLS 663
Query: 377 ADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
D T+ L++ + G K ++ EK ++ + YN V+ + + E R+
Sbjct: 664 PDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRM 723
Query: 437 FKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI 468
M + P TY + Y GM +I
Sbjct: 724 LSEMTERGIRPCIFTYNTFVSGYTAMGMFAEI 755
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 142 bits (359), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHR-ARQLFTTMIEEGCDPSPETYTA 172
+A+ VF+ +KE+ P TY +I GK G + + F M G P T+ +
Sbjct: 286 EAISVFNSMKEYGL-RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNS 344
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
LLA R L + A ++ +EM N + Q DVF+Y+TL+ + DL + M +
Sbjct: 345 LLAVCSRGGLWEAARNLFDEMTNRRIEQ-DVFSYNTLLDAICKGGQMDLAFEILAQMPVK 403
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
IMPN V+ + V+ G+ KAG+FD+ + M D + NT++S++ +G+ +
Sbjct: 404 RIMPNVVSYSTVIDGFAKAGRFDEALNLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEE 462
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+ + GI+ + T+N L+G YGK+ YD++ V M++ TY+ +I+
Sbjct: 463 ALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLID 522
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
++ G K F + ++ G++AD + LI+ GL +S + K I+
Sbjct: 523 GYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISP 582
Query: 413 NTTFYNAVLSACTKA 427
N YN+++ A ++
Sbjct: 583 NVVTYNSIIDAFGRS 597
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 160/347 (46%), Gaps = 6/347 (1%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
+I LG+ G+ A+++F T G + ++AL++AY RS L +EA S+ N MK +
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 198 LCQPDVFTYSTLIKPCV-DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
L +P++ TY+ +I C +F V +++M + P+ +T N +L+ + G ++
Sbjct: 299 L-RPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEA 357
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
+ M + + DV++ NT++ GQ+D+ + + I P +++ +I
Sbjct: 358 ARNLFDEM-TNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
+ K +D+ + MR L +YN ++ +T VG ++ +M + G+K
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIK 476
Query: 377 ADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
D T+ L+ G+ G + +V ++ + N Y+ ++ +K E +
Sbjct: 477 KDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEI 536
Query: 437 FKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
F+ K D Y+ +I+A K G+ L E M +GI
Sbjct: 537 FREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDE---MTKEGI 580
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 41/251 (16%)
Query: 117 EVFDMLKEHSFYEPKEG--TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
E D+L+E + K+ TY L+ GK G+ +++FT M E P+ TY+ L+
Sbjct: 462 EALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLI 521
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARS 233
Y + L EA I E K+ L + DV YS LI C + V L+ ++M
Sbjct: 522 DGYSKGGLYKEAMEIFREFKSAGL-RADVVLYSALIDALCKNGLVGSAVSLI-DEMTKEG 579
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQM------------EKVLSSMLESTSCKPDVWTMNTII 281
I PN VT N ++ +G++ D+ LS++ E+ N +I
Sbjct: 580 ISPNVVTYNSIIDAFGRSATMDRSADYSNGGSLPFSSSALSALTETEG--------NRVI 631
Query: 282 SVFG----------------NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
+FG M ++ + + + K I+P TF+ ++ A + +
Sbjct: 632 QLFGQLTTESNNRTTKDCEEGMQELSCILEVFRKMHQLEIKPNVVTFSAILNACSRCNSF 691
Query: 326 DKMSTVMEYMR 336
+ S ++E +R
Sbjct: 692 EDASMLLEELR 702
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 91/202 (45%), Gaps = 1/202 (0%)
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
+ +IS G G++ + ++ +E G F+ LI AYG+ ++++ +V M++
Sbjct: 237 SAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKE 296
Query: 338 LQFPWTTSTYNNVIEAFTDVG-DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
TYN VI+A G + K + FD+M+ G++ D TF L+ + GL+
Sbjct: 297 YGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWE 356
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ I ++ YN +L A K + + +M + P+ +Y+ +I
Sbjct: 357 AARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVI 416
Query: 457 EAYRKEGMNDKIYYLEQEKKTM 478
+ + K G D+ L E + +
Sbjct: 417 DGFAKAGRFDEALNLFGEMRYL 438
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 167/378 (44%), Gaps = 6/378 (1%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ L + + KQ A+EV D + + Y P TY LI + A +L
Sbjct: 208 NTILRSLCDSGKLKQ---AMEVLDRMLQRDCY-PDVITYTILIEATCRDSGVGHAMKLLD 263
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
M + GC P TY L+ C+ LDEA LN+M + CQP+V T++ +++
Sbjct: 264 EMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIILRSMCST 322
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
++ E L DM + P+ VT NI+++ + G + +L M + C+P+ +
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQH-GCQPNSLS 381
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
N ++ F ++D ++ E+ + G P+ T+N ++ A K + ++ +
Sbjct: 382 YNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLS 441
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
TYN VI+ G D+MRA+ +K D+ T+ L+ G + G
Sbjct: 442 SKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ I E+ I N +N+++ K+ M + C P++T+YTI+I
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILI 561
Query: 457 EAYRKEGMNDKIYYLEQE 474
E EGM + L E
Sbjct: 562 EGLAYEGMAKEALELLNE 579
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 134/283 (47%), Gaps = 9/283 (3%)
Query: 97 NTVTEDLSER--IEKKQWLQALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQ 153
N +T ++ R +W+ A ++ DML++ + P T+ LI L + G RA
Sbjct: 308 NVITHNIILRSMCSTGRWMDAEKLLADMLRKG--FSPSVVTFNILINFLCRKGLLGRAID 365
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP- 212
+ M + GC P+ +Y LL +C+ +D A L M + C PD+ TY+T++
Sbjct: 366 ILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG-CYPDIVTYNTMLTAL 424
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
C D D VE+L + ++++ P +T N V+ G KAGK + K+L M + KP
Sbjct: 425 CKDGKVEDAVEILNQ-LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEM-RAKDLKP 482
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
D T ++++ G++D K++ +F GI P TFN ++ K R D+ +
Sbjct: 483 DTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFL 542
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
+M ++Y +IE G AK +++ +G+
Sbjct: 543 VFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 134/331 (40%), Gaps = 6/331 (1%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
++G+ + M+ G P T L+ +CR +A IL E+ PDV
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL-EILEGSGAVPDV 172
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
TY+ +I A + + + + M S+ P+ VT N +L +GK Q +VL
Sbjct: 173 ITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
ML+ C PDV T +I + K ++ R+ G P+ T+N+L+ K+
Sbjct: 230 MLQR-DCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
D+ + M T+N ++ + G + E M +G TF
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
LIN GL + I ++ + N+ YN +L K + + +RM
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 444 QCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQ 473
C PD TY M+ A K+G + D + L Q
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 139/333 (41%), Gaps = 7/333 (2%)
Query: 146 GQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFT 205
G+ +A ++ + G P TY +++ YC++ ++ A S+L+ M PDV T
Sbjct: 151 GKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS----VSPDVVT 206
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
Y+T+++ D+ K + + M R P+ +T I++ + K+L M
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM- 265
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY-GKKRM 324
C PDV T N +++ G++D K+ + G +P T NI++ + R
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
D + + +RK F + T+N +I G ++M G + +S ++
Sbjct: 326 MDAEKLLADMLRK-GFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNP 384
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
L++GF + I ++ + YN +L+A K + + + ++
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 445 CPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
C P TY +I+ K G K L E +
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRA 477
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 102/383 (26%), Positives = 179/383 (46%), Gaps = 17/383 (4%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
+ ++ W +ALEVF+ L ++ P ++ +LG+ Q A ++FT E
Sbjct: 166 VGQESWQRALEVFEWLNLRHWHSPNARMVAAILGVLGRWNQESLAVEIFTRA-EPTVGDR 224
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD---LVE 223
+ Y A++ Y RS +A +++ M+ C PD+ +++TLI + + VE
Sbjct: 225 VQVYNAMMGVYSRSGKFSKAQELVDAMRQRG-CVPDLISFNTLINARLKSGGLTPNLAVE 283
Query: 224 LLYEDMAARS-IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
LL DM S + P+ +T N +LS + D KV M E+ C+PD+WT N +IS
Sbjct: 284 LL--DMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDM-EAHRCQPDLWTYNAMIS 340
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
V+G G E+ + + G P+ T+N L+ A+ ++R +K+ V + M+K+ F
Sbjct: 341 VYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGK 400
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRA-EGMKADSKTFCCLINGFANAGLFHKVIST 401
TYN +I + G + M+ G D+ T+ LI+ A V +
Sbjct: 401 DEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN--RTVEAA 458
Query: 402 VQLAEKFEIAENTTF--YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
++E ++ T Y+A++ KA E E F M + PD+ Y++M++
Sbjct: 459 ALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVL 518
Query: 460 RKEGMNDKIYYLEQEKKTMITDG 482
+ K + L ++ MI+DG
Sbjct: 519 LRGNETRKAWGLYRD---MISDG 538
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/375 (23%), Positives = 173/375 (46%), Gaps = 14/375 (3%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
++K W +A V L++ S P T+ L+ + G RAR +F TM+ +G P+
Sbjct: 764 KQKLWQKAESVVGNLRQ-SGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTV 822
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFK-----FDLV 222
E+ LL A C L+E + ++ E+++ + S L+ +DAF F+ V
Sbjct: 823 ESINILLHALCVDGRLEELYVVVEELQDMGF---KISKSSILL--MLDAFARAGNIFE-V 876
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ +Y M A +P +++ K + E ++S M E + K ++ N+++
Sbjct: 877 KKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEM-EEANFKVELAIWNSMLK 935
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
++ + + Y++ + G+EP+ T+N LI Y + R ++ +M+ MR L
Sbjct: 936 MYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
TY ++I AF + E F+++ ++G+K D + ++ ++G K +
Sbjct: 996 KLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLL 1055
Query: 403 QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY-RK 461
Q+ + I + ++ + + + + E E+V +KD + Y+ +I+AY R
Sbjct: 1056 QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Query: 462 EGMNDKIYYLEQEKK 476
+ N I L + KK
Sbjct: 1116 KDYNSGIERLLEMKK 1130
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 135/334 (40%), Gaps = 42/334 (12%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN---HPLCQPDVFTYS 207
A Q+F+ + GC+ S +++ YC+ + A ++N+ + H C P
Sbjct: 700 ASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP------ 753
Query: 208 TLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
+Y D ++ YGK + + E V+ ++ +S
Sbjct: 754 -----------------MYTD---------------IIEAYGKQKLWQKAESVVGNLRQS 781
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
PD+ T N+++S + G + + G P + NIL+ A ++
Sbjct: 782 GRT-PDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEE 840
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
+ V+E ++ + F + S+ +++AF G+ ++ + M+A G + + +I
Sbjct: 841 LYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIE 900
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
V E+ +N++L T ED + +V++R+K+ P
Sbjct: 901 LLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEP 960
Query: 448 DDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITD 481
D+TTY +I Y ++ ++ Y L Q+ + + D
Sbjct: 961 DETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/314 (19%), Positives = 133/314 (42%), Gaps = 14/314 (4%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
ARQL I G + +T ++L +Y S EAF +L +K H + T + ++
Sbjct: 594 ARQL-KVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEALIV 652
Query: 211 KPC-VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
C V+ L E + ++ +L + + +V S L +
Sbjct: 653 LHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSD-LRLSG 711
Query: 270 CKPDVWTMNTIISVFGNMG----QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
C+ +++ V+ +G ++ + K +F P + +I AYGK++++
Sbjct: 712 CEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP---MYTDIIEAYGKQKLW 768
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
K +V+ +R+ T+N+++ A+ G + F+ M +G ++ L
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 386 INGFANAGLFHKVISTVQLAEK--FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
++ G ++ V+ + F+I++++ +L A +A ++ E+++++ MK
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILL--MLDAFARAGNIFEVKKIYSSMKAA 886
Query: 444 QCPPDDTTYTIMIE 457
P Y +MIE
Sbjct: 887 GYLPTIRLYRMMIE 900
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 165/357 (46%), Gaps = 3/357 (0%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
+ W ++L +F ++ + +P E Y +I LLG+ G + ++F M +G S
Sbjct: 118 RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVF 177
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV-DAFKFDLVELLYE 227
+YTAL+ AY R+ + + +L+ MKN + P + TY+T+I C ++ + L+
Sbjct: 178 SYTALINAYGRNGRYETSLELLDRMKNEKI-SPSILTYNTVINACARGGLDWEGLLGLFA 236
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+M I P+ VT N +LS G D+ E V +M PD+ T + ++ FG +
Sbjct: 237 EMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTM-NDGGIVPDLTTYSHLVETFGKL 295
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
+++ + + + G P+ ++N+L+ AY K + V M+ +TY
Sbjct: 296 RRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTY 355
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ ++ F G ++ F +M++ D+ T+ LI F G F +V++ +
Sbjct: 356 SVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVE 415
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
I + Y ++ AC K + ++ + M N P YT +IEA+ + +
Sbjct: 416 ENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAAL 472
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 3/348 (0%)
Query: 112 WLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
W L +F ++ H +P TY L+ G A +F TM + G P TY+
Sbjct: 228 WEGLLGLFAEMR-HEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYS 286
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
L+ + + L++ +L EM + PD+ +Y+ L++ + ++ M A
Sbjct: 287 HLVETFGKLRRLEKVCDLLGEMASGG-SLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
PN T +++L+ +G++G++D + ++ M +S++ PD T N +I VFG G
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEM-KSSNTDPDAATYNILIEVFGEGGYFK 404
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+ + IEP+ T+ +I A GK +++ +++YM ++ Y VI
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVI 464
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
EAF + F+ M G +TF L+ FA GL + + + I
Sbjct: 465 EAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIP 524
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
N +NA + A + E + + M+ ++C PD+ T ++ Y
Sbjct: 525 RNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVY 572
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 151/345 (43%), Gaps = 2/345 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY L+ GK + + L M G P +Y LL AY +S + EA +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
++M+ C P+ TYS L+ + ++D V L+ +M + + P+ T NI++ +G
Sbjct: 340 FHQMQAAG-CTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ G F ++ + M+E + +PD+ T II G G + K + I P +
Sbjct: 399 EGGYFKEVVTLFHDMVEE-NIEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSS 457
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+ + +I A+G+ +Y++ M ++ + T+++++ +F G K E +
Sbjct: 458 KAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSR 517
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
+ G+ + TF I + G F + + T EK + AVLS + A
Sbjct: 518 LVDSGIPRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARL 577
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
+ E F+ MK + P Y +M+ Y K D + L +E
Sbjct: 578 VDECREQFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEE 622
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 121/272 (44%), Gaps = 7/272 (2%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
DM++E+ EP TY +I GK G AR++ M PS + YT ++ A+ +
Sbjct: 412 DMVEEN--IEPDMETYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQ 469
Query: 180 SNLLDEAFSILNEMKNHPL-CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNT 238
+ L +EA N M H + P + T+ +L+ E + + I N
Sbjct: 470 AALYEEALVAFNTM--HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNR 527
Query: 239 VTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYE 298
T N + Y + GKF++ K M E + C PD T+ ++SV+ +D + +E
Sbjct: 528 DTFNAQIEAYKQGGKFEEAVKTYVDM-EKSRCDPDERTLEAVLSVYSFARLVDECREQFE 586
Query: 299 KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA-FTDV 357
+ + I P + +++ YGK +D ++ ++E M + +I+ + D
Sbjct: 587 EMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNRVSNIHQVIGQMIKGDYDDD 646
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
+ + +EY D++ +EG + + L++
Sbjct: 647 SNWQIVEYVLDKLNSEGCGLGIRFYNALLDAL 678
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 139/344 (40%), Gaps = 5/344 (1%)
Query: 104 SERIEKKQWLQALE-VFDMLKEHSFYE--PKEGTYMKLIVLLGKSGQPHRARQLFTTMIE 160
S +E L+ LE V D+L E + P +Y L+ KSG A +F M
Sbjct: 286 SHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQA 345
Query: 161 EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD 220
GC P+ TY+ LL + +S D+ + EMK+ PD TY+ LI+ + F
Sbjct: 346 AGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN-TDPDAATYNILIEVFGEGGYFK 404
Query: 221 LVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 280
V L+ DM +I P+ T ++ GK G + K+L M + P +
Sbjct: 405 EVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGV 463
Query: 281 ISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF 340
I FG + + G P TF+ L+ ++ + + + ++ +
Sbjct: 464 IEAFGQAALYEEALVAFNTMHEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGI 523
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
P T+N IEA+ G + T+ M D +T +++ ++ A L +
Sbjct: 524 PRNRDTFNAQIEAYKQGGKFEEAVKTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECRE 583
Query: 401 TVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
+ + +I + Y +L+ K E ++ + + M N+
Sbjct: 584 QFEEMKASDILPSIMCYCMMLAVYGKTERWDDVNELLEEMLSNR 627
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 39/287 (13%)
Query: 234 IMPNTVTQN---IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
I N ++ N +V + G + + ++ M CKP+ +IS+ G G +
Sbjct: 98 IFKNKLSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLL 157
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
D + +++ + G+ ++ LI AYG+ Y+ +++ M+ + + TYN V
Sbjct: 158 DKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTV 217
Query: 351 IEAFTDVG-DAKNMEYTFDQMRAEGMKADSKTF-----CCLINGFAN-----------AG 393
I A G D + + F +MR EG++ D T+ C I G + G
Sbjct: 218 INACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGG 277
Query: 394 LFHKVISTVQLAEKF--------------EIAE-----NTTFYNAVLSACTKAEDLMEME 434
+ + + L E F E+A + T YN +L A K+ + E
Sbjct: 278 IVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAM 337
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITD 481
VF +M+ C P+ TY++++ + + G D + L E K+ TD
Sbjct: 338 GVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTD 384
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 174/367 (47%), Gaps = 5/367 (1%)
Query: 98 TVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTT 157
TV+ ++ K + +AL + D + E+ F +P E TY ++ L KSG A LF
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRK 235
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF 217
M E S Y+ ++ + C+ D+A S+ NEM+ + + DV TYS+LI +
Sbjct: 236 MEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGI-KADVVTYSSLIGGLCNDG 294
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
K+D + +M R+I+P+ VT + ++ + K GK + +++ + M+ + PD T
Sbjct: 295 KWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI-TRGIAPDTITY 353
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK-KRMYDKMSTVMEYMR 336
N++I F + + ++ + G EP+ T++ILI +Y K KR+ D M E
Sbjct: 354 NSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISS 413
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
K P T TYN ++ F G + F +M + G+ T+ L++G + G +
Sbjct: 414 KGLIP-NTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELN 472
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
K + + +K + YN ++ A + + +F + D PD TY +MI
Sbjct: 473 KALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMI 532
Query: 457 EAYRKEG 463
K+G
Sbjct: 533 GGLCKKG 539
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 148/359 (41%), Gaps = 3/359 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T+ L+ G+ A L M+E P T + L+ C + EA
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++ M + QPD TY ++ + L L+ M R+I + V +IV+
Sbjct: 196 VLIDRMVEYGF-QPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDS 254
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
K G FD + + M E K DV T +++I N G+ D K + I P
Sbjct: 255 LCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP 313
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ TF+ LI + K+ + + M T TYN++I+ F F
Sbjct: 314 DVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMF 373
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
D M ++G + D T+ LIN + A + + + NT YN ++ ++
Sbjct: 374 DLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQS 433
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQEKKTMITDGIKV 485
L + +F+ M PP TY I+++ G +N + E+ +K+ +T GI +
Sbjct: 434 GKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGI 492
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 127/297 (42%), Gaps = 10/297 (3%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYE 227
T T ++ YCR L AFS+L +PD T+STL+ C++ + V L+ +
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGY-EPDTITFSTLVNGFCLEGRVSEAVALV-D 164
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M P+ VT + +++G G+ + ++ M+E +PD T +++
Sbjct: 165 RMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVE-YGFQPDEVTYGPVLNRLCKS 223
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G + + K I+ ++I+I + K +D ++ M TY
Sbjct: 224 GNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTY 283
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+++I + G + +M + D TF LI+ F G K++ +L +
Sbjct: 284 SSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEG---KLLEAKELYNE 340
Query: 408 F---EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
IA +T YN+++ K L E ++F M C PD TY+I+I +Y K
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCK 397
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/237 (21%), Positives = 94/237 (39%), Gaps = 3/237 (1%)
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
K + + SM++S P N + S Q D++ + + GIE + T
Sbjct: 50 KVNDAIDLFESMIQSRPL-PTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTM 108
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
I+I Y +K+ +V+ KL + T T++ ++ F G D+M
Sbjct: 109 TIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVE 168
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
+ D T LING G + + + ++ + Y VL+ K+ +
Sbjct: 169 MKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSAL 228
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL--EQEKKTMITDGIKVSQ 487
+F++M++ Y+I+I++ K+G D L E E K + D + S
Sbjct: 229 ALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSS 285
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 168/365 (46%), Gaps = 4/365 (1%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQP-HRARQL 154
V + T +S ++ +A+ VF ++E +P TY ++ + GK G P ++ L
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGC-KPTLITYNVILNVFGKMGTPWNKITSL 266
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
M +G P TY L+ R +L EA + EMK D TY+ L+
Sbjct: 267 VEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSY-DKVTYNALLDVYG 325
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
+ + + +M P+ VT N ++S Y + G D+ ++ + M E + KPDV
Sbjct: 326 KSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGT-KPDV 384
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
+T T++S F G+++ +E+ RN G +P TFN I YG + + +M + +
Sbjct: 385 FTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDE 444
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+ T+N ++ F G + F +M+ G + +TF LI+ ++ G
Sbjct: 445 INVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGS 504
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTI 454
F + ++ + + + + YN VL+A + + E+V M+D +C P++ TY
Sbjct: 505 FEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCS 564
Query: 455 MIEAY 459
++ AY
Sbjct: 565 LLHAY 569
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 164/389 (42%), Gaps = 79/389 (20%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A +VF+ +K F K TY L+ + GKS +P A ++ M+ G PS TY +L
Sbjct: 297 EAAQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSL 355
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
++AY R +LDEA + N+M +PDVFTY+T
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKG-TKPDVFTYTT------------------------- 389
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+LSG+ +AGK + + M + CKP++ T N I ++GN G+ M
Sbjct: 390 ----------LLSGFERAGKVESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K +++ G+ P+ T+N L+ +G+ M ++S V + M++ F T+N +I A
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISA 498
Query: 354 FTDVGDAKNMEYTFDQMRAEGM-----------------------------------KAD 378
++ G + + +M G+ K +
Sbjct: 499 YSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPN 558
Query: 379 SKTFCCLINGFANA---GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMER 435
T+C L++ +AN GL H + V I ++ C+K + L E ER
Sbjct: 559 ELTYCSLLHAYANGKEIGLMHSLAEEVYSG---VIEPRAVLLKTLVLVCSKCDLLPEAER 615
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
F +K+ PD TT M+ Y + M
Sbjct: 616 AFSELKERGFSPDITTLNSMVSIYGRRQM 644
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/388 (21%), Positives = 160/388 (41%), Gaps = 38/388 (9%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ +F+ ++ ++ +P T+ I + G G+ ++F + G P T+ LL
Sbjct: 403 AMSIFEEMR-NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLL 461
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A + ++ + E + EMK P+ T++TLI F+ +Y M +
Sbjct: 462 AVFGQNGMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGV 520
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM- 293
P+ T N VL+ + G ++Q EKVL+ M E CKP+ T +++ + N +I +M
Sbjct: 521 TPDLSTYNTVLAALARGGMWEQSEKVLAEM-EDGRCKPNELTYCSLLHAYANGKEIGLMH 579
Query: 294 ----------------------------------EKWYEKFRNFGIEPETRTFNILIGAY 319
E+ + + + G P+ T N ++ Y
Sbjct: 580 SLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIY 639
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
G+++M K + V++YM++ F + +TYN+++ + D E ++ A+G+K D
Sbjct: 640 GRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDI 699
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
++ +I + I + YN + + E V +
Sbjct: 700 ISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRY 759
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
M + C P+ TY +++ Y K D+
Sbjct: 760 MIKHGCRPNQNTYNSIVDGYCKLNRKDE 787
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 157/370 (42%), Gaps = 40/370 (10%)
Query: 110 KQWLQALEVFD-MLKEHSFYEPKEGTYMKLIV-LLGKSGQPHRARQLFTTMIEEGCDPSP 167
K++ AL FD +K+ + + + + +I+ +LGK G+ A +F + E+G
Sbjct: 149 KKFDLALRAFDWFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDG----- 203
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
FS+ DV++Y++LI ++ ++ +++
Sbjct: 204 -------------------FSL------------DVYSYTSLISAFANSGRYREAVNVFK 232
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGK-FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
M P +T N++L+ +GK G ++++ ++ M +S PD +T NT+I+
Sbjct: 233 KMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKM-KSDGIAPDAYTYNTLITCCKR 291
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
+ +E+ + G + T+N L+ YGK + V+ M F + T
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
YN++I A+ G +QM +G K D T+ L++GF AG +S +
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
N +NA + EM ++F + PD T+ ++ + + GM+
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 467 KIYYLEQEKK 476
++ + +E K
Sbjct: 472 EVSGVFKEMK 481
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A F LKE F P T ++ + G+ +A + M E G PS TY +L
Sbjct: 612 EAERAFSELKERGF-SPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSL 670
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ + RS ++ IL E+ + +PD+ +Y+T+I + ++ +M
Sbjct: 671 MYMHSRSADFGKSEEILREILAKGI-KPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSG 729
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
I+P+ +T N + Y F++ V+ M++ C+P+ T N+I+ + + + D
Sbjct: 730 IVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKH-GCRPNQNTYNSIVDGYCKLNRKDEA 788
Query: 294 EKWYEKFRNF 303
+ + E RN
Sbjct: 789 KLFVEDLRNL 798
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 175/390 (44%), Gaps = 44/390 (11%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG-CDPSPETYTA 172
+AL VF K +P TY +I++L + GQ + +++T M EG C P TY+A
Sbjct: 180 KALSVFYQAKGRKC-KPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSA 238
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPL---------------------------------- 198
L+++Y + D A + +EMK++ +
Sbjct: 239 LISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAG 298
Query: 199 CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQME 258
C P V+TY+ LIK A + D Y+DM + P+ V N +++ GK G+ +++
Sbjct: 299 CSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELT 358
Query: 259 KVLSSMLESTSCKPDVWTMNTII-SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
V S M C P V + NT+I ++F + + + W++K + + P T++ILI
Sbjct: 359 NVFSEM-GMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILID 417
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT---FDQMRAEG 374
Y K +K ++E M + FP + Y ++I A +G AK E F +++
Sbjct: 418 GYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINA---LGKAKRYEAANELFKELKENF 474
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
S+ + +I F G + + + + YNA++S KA + E
Sbjct: 475 GNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEAN 534
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ ++M++N C D ++ I++ + + G+
Sbjct: 535 SLLRKMEENGCRADINSHNIILNGFARTGV 564
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 140/328 (42%), Gaps = 2/328 (0%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
+L+ LG++ +A +F C P+ TY +++ + ++ + EM N
Sbjct: 167 ELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNE 226
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
C PD TYS LI + D L+++M + P +L Y K GK ++
Sbjct: 227 GDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEK 286
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
+ M + C P V+T +I G G++D +Y+ G+ P+ N L+
Sbjct: 287 ALDLFEEM-KRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLM 345
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA-FTDVGDAKNMEYTFDQMRAEGM 375
GK ++++ V M + T +YN VI+A F + FD+M+A+ +
Sbjct: 346 NILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSV 405
Query: 376 KADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMER 435
T+ LI+G+ K + ++ ++ Y ++++A KA+
Sbjct: 406 SPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANE 465
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+FK +K+N Y +MI+ + K G
Sbjct: 466 LFKELKENFGNVSSRVYAVMIKHFGKCG 493
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 123/266 (46%), Gaps = 5/266 (1%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NTV + L E K + FD +K S P E TY LI K+ + +A L
Sbjct: 377 NTVIKALFE--SKAHVSEVSSWFDKMKADSV-SPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
M E+G P P Y +L+ A ++ + A + E+K + Y+ +IK
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKEN-FGNVSSRVYAVMIKHFGKC 492
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
K L+ +M + P+ N ++SG KAG ++ +L M E C+ D+ +
Sbjct: 493 GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKM-EENGCRADINS 551
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
N I++ F G + +E ++ GI+P+ T+N L+G + M+++ + +M M+
Sbjct: 552 HNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKN 362
F + TY+++++A +V K+
Sbjct: 612 DKGFEYDAITYSSILDAVGNVDHEKD 637
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 153/380 (40%), Gaps = 74/380 (19%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ +FD +K++ +P E Y L+ + K G+ +A LF M GC P+ TYT L+
Sbjct: 252 AIRLFDEMKDNCM-QPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELI 310
Query: 175 AAYCRSNLLDEAFSILNEMKNHPL----------------------------------CQ 200
++ +DEA+ +M L C
Sbjct: 311 KGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCT 370
Query: 201 PDVFTYSTLIKPCVDA-FKFDLVELLYEDMAARSIMPNTVTQNIVLSGY----------- 248
P V +Y+T+IK ++ V ++ M A S+ P+ T +I++ GY
Sbjct: 371 PTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALL 430
Query: 249 ------------------------GKAGKFDQMEKVLSSMLES-TSCKPDVWTMNTIISV 283
GKA +++ ++ + E+ + V+ + +I
Sbjct: 431 LLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAV--MIKH 488
Query: 284 FGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT 343
FG G++ + + +N G P+ +N L+ K M ++ ++++ M +
Sbjct: 489 FGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRAD 548
Query: 344 TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ 403
+++N ++ F G + F+ ++ G+K D T+ L+ FA+AG+F + ++
Sbjct: 549 INSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMR 608
Query: 404 LAEKFEIAENTTFYNAVLSA 423
+ + Y+++L A
Sbjct: 609 EMKDKGFEYDAITYSSILDA 628
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/307 (20%), Positives = 125/307 (40%), Gaps = 1/307 (0%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
TY L+ + L E + + E+ + S L+K A ++
Sbjct: 128 TYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQ 187
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
R P + T N V+ + G+ +++ +V + M C PD T + +IS + +G
Sbjct: 188 AKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLG 247
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
+ D + +++ ++ ++P + + L+G Y K +K + E M++ T TY
Sbjct: 248 RNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYT 307
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+I+ G + M +G+ D L+N G ++ + +
Sbjct: 308 ELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMW 367
Query: 409 EIAENTTFYNAVLSACTKAE-DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
YN V+ A +++ + E+ F +MK + P + TY+I+I+ Y K +K
Sbjct: 368 RCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEK 427
Query: 468 IYYLEQE 474
L +E
Sbjct: 428 ALLLLEE 434
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 161/344 (46%), Gaps = 4/344 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY +I L K G+P A L M + + Y+ ++ + C+ +D+A +
Sbjct: 202 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALN 261
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM N + +PDVFTYS+LI + ++ L DM R I PN VT N ++ +
Sbjct: 262 LFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAF 320
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK + EK+ M++ S P++ T N++I+ F ++D ++ + + P+
Sbjct: 321 AKEGKLIEAEKLFDEMIQR-SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPD 379
Query: 309 TRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+N LI + K K++ D M + R+ T TY +I F D N + F
Sbjct: 380 VVTYNTLINGFCKAKKVVDGMELFRDMSRR-GLVGNTVTYTTLIHGFFQASDCDNAQMVF 438
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
QM ++G+ + T+ L++G G K + + +K ++ + YN + KA
Sbjct: 439 KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKA 498
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
+ + +F + PD Y MI + K+G+ ++ Y L
Sbjct: 499 GKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTL 542
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 128/272 (47%), Gaps = 3/272 (1%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+ ++A ++FD + + S +P TY LI + A+Q+FT M+ + C P TY
Sbjct: 325 KLIEAEKLFDEMIQRSI-DPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
L+ +C++ + + + +M L V TY+TLI A D +++++ M
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV-TYTTLIHGFFQASDCDNAQMVFKQMV 442
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ + PN +T N +L G K GK ++ V+ L+ + +PD++T N + G++
Sbjct: 443 SDGVHPNIMTYNTLLDGLCKNGKLEK-AMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ + G++P+ +N +I + KK + ++ T+ M++ + TYN +
Sbjct: 502 EDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTL 561
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
I A GD +MR+ D+ T+
Sbjct: 562 IRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/405 (21%), Positives = 157/405 (38%), Gaps = 41/405 (10%)
Query: 114 QALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
+A+++F +M+K F P + KL+ + K + M G + TY
Sbjct: 48 EAVDLFGEMVKSRPF--PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 173 LLAAYCRSNLLDEAFSILNEMKN--------------HPLC------------------- 199
++ CR + L A +IL +M + C
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 200 -QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQME 258
QPD T++TL+ K L E M + P+ VT V++G K G+ D
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225
Query: 259 KVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA 318
+L+ M E + DV +T+I +D + + N GI P+ T++ LI
Sbjct: 226 NLLNKM-EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
+ S ++ M + + T+N++I+AF G E FD+M + +
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
T+ LINGF + L + + YN +++ KA+ +++ +F+
Sbjct: 345 IVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFR 404
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
M + TYT +I + + D + K M++DG+
Sbjct: 405 DMSRRGLVGNTVTYTTLIHGFFQASDCDNA---QMVFKQMVSDGV 446
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/337 (22%), Positives = 137/337 (40%), Gaps = 48/337 (14%)
Query: 183 LDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
LDEA + EM K+ P P + +S L+ KFDLV E M + N T
Sbjct: 46 LDEAVDLFGEMVKSRPF--PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTY 103
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
NI+++ + + +L M++ P + T+N++++ F + +I ++
Sbjct: 104 NIMINCLCRRSQLSFALAILGKMMK-LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMV 162
Query: 302 NFGIEPETRTFNILIGA----------------------------YG-------KKRMYD 326
G +P+T TF L+ YG K+ D
Sbjct: 163 EMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPD 222
Query: 327 KMSTVMEYMRKLQFPWTTSTYNNVIEA---FTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
++ M K + Y+ VI++ + V DA N+ F +M +G++ D T+
Sbjct: 223 LALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNL---FTEMDNKGIRPDVFTYS 279
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
LI+ N G + + + +I N +N+++ A K L+E E++F M
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMIT 480
P+ TY +I + M+D++ +Q M++
Sbjct: 340 SIDPNIVTYNSLINGF---CMHDRLDEAQQIFTLMVS 373
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 164/381 (43%), Gaps = 46/381 (12%)
Query: 96 VNTVTEDLS--ERIEKKQWLQALEVFD-MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRAR 152
VN++ L +R+E A+++FD L+ S + K T+ LI L G+ +A
Sbjct: 174 VNSLLNTLVKLDRVE-----DAMKLFDEHLRFQSCNDTK--TFNILIRGLCGVGKAEKAL 226
Query: 153 QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP 212
+L M GC+P TY L+ +C+SN L++A + ++K+ +C PDV TY+++I
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
A K L +DM I P VT N+++ GY KAG+ E++ M+ S C P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI-SFGCFP 345
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
DV T ++I + +GQ+ + +E+ G+ P T++ILI A + K ++
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ YN VI+ F G ++M + K D TF LI G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + +S +F +M C PD T
Sbjct: 466 GRMFEAVS-----------------------------------IFHKMVAIGCSPDKITV 490
Query: 453 TIMIEAYRKEGMNDKIYYLEQ 473
+ ++ K GM + Y+L Q
Sbjct: 491 SSLLSCLLKAGMAKEAYHLNQ 511
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 15/332 (4%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIE-EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
L+ + G+ H A L E EGC +LL + + +++A + +E
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
C D T++ LI+ K + L M+ P+ VT N ++ G+ K+ + ++
Sbjct: 201 QSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
++ + + C PDV T ++IS + G++ + GI P TFN+L+
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 317 GAYGKKRMYDKMSTVMEYMRKL----QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
Y K +M T E K+ FP T+ ++I+ + VG +++M A
Sbjct: 320 DGYAKA---GEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKAEDLM 431
GM ++ T+ LIN N K + QLA K +I YN V+ KA +
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVN 434
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E + + M+ +C PD T+TI+I + +G
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 4/272 (1%)
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
+TY+ L + A DL ++E M + + PN ++S + + GK +L
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
E C +N++++ + +++ K +++ F +T+TFNILI
Sbjct: 164 SFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA-DSKTF 382
+K ++ M TYN +I+ F + F +++ + + D T+
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
+I+G+ AG + S + + I +N ++ KA +++ E + +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 443 NQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
C PD T+T +I+ Y + G + + L +E
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+F +K S P TY +I K+G+ A L M+ G P+ T+ L
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ Y ++ + A I +M + C PDV T+++LI + L+E+M AR
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFG-CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ PN T +I+++ + + ++L L S P + N +I F G+++
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQ-LASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 294 EKWYEKFRNFGIEPETRTFNIL-IGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
E+ +P+ TF IL IG K RM++ +S + M + T ++++
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-IFHKMVAIGCSPDKITVSSLLS 495
Query: 353 AFTDVGDAKNMEYTFDQMRAEG 374
G AK Y +Q+ +G
Sbjct: 496 CLLKAGMAKE-AYHLNQIARKG 516
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 164/381 (43%), Gaps = 46/381 (12%)
Query: 96 VNTVTEDLS--ERIEKKQWLQALEVFD-MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRAR 152
VN++ L +R+E A+++FD L+ S + K T+ LI L G+ +A
Sbjct: 174 VNSLLNTLVKLDRVE-----DAMKLFDEHLRFQSCNDTK--TFNILIRGLCGVGKAEKAL 226
Query: 153 QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP 212
+L M GC+P TY L+ +C+SN L++A + ++K+ +C PDV TY+++I
Sbjct: 227 ELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTYTSMISG 286
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
A K L +DM I P VT N+++ GY KAG+ E++ M+ S C P
Sbjct: 287 YCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMI-SFGCFP 345
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
DV T ++I + +GQ+ + +E+ G+ P T++ILI A + K ++
Sbjct: 346 DVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCNENRLLKARELL 405
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ YN VI+ F G ++M + K D TF LI G
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKITFTILIIGHCMK 465
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + +S +F +M C PD T
Sbjct: 466 GRMFEAVS-----------------------------------IFHKMVAIGCSPDKITV 490
Query: 453 TIMIEAYRKEGMNDKIYYLEQ 473
+ ++ K GM + Y+L Q
Sbjct: 491 SSLLSCLLKAGMAKEAYHLNQ 511
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 145/332 (43%), Gaps = 15/332 (4%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIE-EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
L+ + G+ H A L E EGC +LL + + +++A + +E
Sbjct: 144 LVSSFAEKGKLHFATALLLQSFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRF 200
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
C D T++ LI+ K + L M+ P+ VT N ++ G+ K+ + ++
Sbjct: 201 QSCN-DTKTFNILIRGLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNK 259
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
++ + + C PDV T ++IS + G++ + GI P TFN+L+
Sbjct: 260 ASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLV 319
Query: 317 GAYGKKRMYDKMSTVMEYMRKL----QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
Y K +M T E K+ FP T+ ++I+ + VG +++M A
Sbjct: 320 DGYAKA---GEMLTAEEIRGKMISFGCFP-DVVTFTSLIDGYCRVGQVSQGFRLWEEMNA 375
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKAEDLM 431
GM ++ T+ LIN N K + QLA K +I YN V+ KA +
Sbjct: 376 RGMFPNAFTYSILINALCNENRLLKARELLGQLASK-DIIPQPFMYNPVIDGFCKAGKVN 434
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E + + M+ +C PD T+TI+I + +G
Sbjct: 435 EANVIVEEMEKKKCKPDKITFTILIIGHCMKG 466
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 116/272 (42%), Gaps = 4/272 (1%)
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
+TY+ L + A DL ++E M + + PN ++S + + GK +L
Sbjct: 104 WTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHFATALLLQ 163
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
E C +N++++ + +++ K +++ F +T+TFNILI
Sbjct: 164 SFEVEGC---CMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIRGLCGVG 220
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA-DSKTF 382
+K ++ M TYN +I+ F + F +++ + + D T+
Sbjct: 221 KAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCSPDVVTY 280
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
+I+G+ AG + S + + I +N ++ KA +++ E + +M
Sbjct: 281 TSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEIRGKMIS 340
Query: 443 NQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
C PD T+T +I+ Y + G + + L +E
Sbjct: 341 FGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEE 372
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 116/262 (44%), Gaps = 5/262 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+F +K S P TY +I K+G+ A L M+ G P+ T+ L
Sbjct: 259 KASEMFKDVKSGSVCSPDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVL 318
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ Y ++ + A I +M + C PDV T+++LI + L+E+M AR
Sbjct: 319 VDGYAKAGEMLTAEEIRGKMISFG-CFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARG 377
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ PN T +I+++ + + ++L L S P + N +I F G+++
Sbjct: 378 MFPNAFTYSILINALCNENRLLKARELLGQ-LASKDIIPQPFMYNPVIDGFCKAGKVNEA 436
Query: 294 EKWYEKFRNFGIEPETRTFNIL-IGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
E+ +P+ TF IL IG K RM++ +S + M + T ++++
Sbjct: 437 NVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVS-IFHKMVAIGCSPDKITVSSLLS 495
Query: 353 AFTDVGDAKNMEYTFDQMRAEG 374
G AK Y +Q+ +G
Sbjct: 496 CLLKAGMAKE-AYHLNQIARKG 516
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 162/352 (46%), Gaps = 9/352 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ + D + E F +P E TY ++ ++ KSGQ A +L M E Y+ ++
Sbjct: 196 AVLLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIII 254
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ LD AF++ NEM+ + D+ Y+TLI+ A ++D L DM R I
Sbjct: 255 DGLCKDGSLDNAFNLFNEMEIKGF-KADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ V + ++ + K GK + E++ M++ PD T ++I F Q+D
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT---TSTYNNVI 351
+ + G P RTFNILI Y K + D +E RK+ T TYN +I
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDG---LELFRKMSLRGVVADTVTYNTLI 429
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
+ F ++G + + F +M + ++ D ++ L++G + G K + + EK ++
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKME 489
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ YN ++ A + + +F + PD TY IMI K+G
Sbjct: 490 LDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKG 541
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 125/265 (47%), Gaps = 2/265 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY LI K Q +A + M+ +GC P+ T+ L+ YC++NL+D+ +
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+M + D TY+TLI+ + K ++ + L+++M +R + P+ V+ I+L G
Sbjct: 410 FRKMSLRGVV-ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLC 468
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
G+ ++ ++ +E + + D+ N II N ++D + G++P+
Sbjct: 469 DNGEPEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+T+NI+IG KK + + M + TYN +I A GDA ++
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 370 MRAEGMKADSKTFCCLINGFANAGL 394
++ G D+ T +++ ++ L
Sbjct: 588 IKRCGFSVDASTVKMVVDMLSDGRL 612
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 2/336 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T+ LI L G+ A +L M+E G P+ T AL+ C + + +A
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++ M QP+ TY ++K + + L L M R I + V +I++ G
Sbjct: 198 LLIDRMVETGF-QPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDG 256
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
K G D + + M E K D+ T+I F G+ D K I P
Sbjct: 257 LCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITP 315
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ F+ LI + K+ + + + M + T TY ++I+ F +
Sbjct: 316 DVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHML 375
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
D M ++G + +TF LING+ A L + + + +T YN ++ +
Sbjct: 376 DLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCEL 435
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L + +F+ M + PD +Y I+++ G
Sbjct: 436 GKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 133/320 (41%), Gaps = 8/320 (2%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A LF M P ++ L + R+ D + +M+ + +++T S +I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMI 114
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
C K L + P+TVT + +++G G+ + +++ M+E
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH- 173
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
KP + T+N +++ G++ ++ G +P T+ ++ K + +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKS---GQTAL 230
Query: 331 VMEYMRKLQ---FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
ME +RK++ Y+ +I+ G N F++M +G KAD + LI
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
GF AG + ++ K +I + ++A++ K L E E + K M P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 448 DDTTYTIMIEAYRKEGMNDK 467
D TYT +I+ + KE DK
Sbjct: 351 DTVTYTSLIDGFCKENQLDK 370
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 178/437 (40%), Gaps = 71/437 (16%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+ T++ L+ K+ A+ + D + E Y P T+ LI L + A L
Sbjct: 80 IVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALV 138
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLC-- 199
M++ GC P+ TY ++ C+ +D AF++LN+M+ LC
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198
Query: 200 ------------------QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
+P+V TYS+LI ++ L DM + I PN VT
Sbjct: 199 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 258
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N ++ + K GKF + EK+ M++ S PD++T N++I+ F ++D ++ +E
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMIKR-SIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+ P+ T+N LI + K + + + + M T TY +I+ GD
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI----------- 410
N + F QM ++G+ D T+ L++G N G K + +K EI
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 411 ------------------------AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCP 446
N YN ++S L E + K+MK++
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 447 PDDTTYTIMIEAYRKEG 463
PD TY +I A+ ++G
Sbjct: 498 PDSGTYNTLIRAHLRDG 514
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 150/359 (41%), Gaps = 10/359 (2%)
Query: 125 HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLD 184
H+ Y TY LI + Q A L M++ G +PS T ++LL YC +
Sbjct: 43 HNLY-----TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 97
Query: 185 EAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIV 244
+A +++++M +PD T++TLI K L + M R PN VT +V
Sbjct: 98 DAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 245 LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 304
++G K G D +L+ M E+ + DV NTII +D +++ G
Sbjct: 157 VNGLCKRGDIDLAFNLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 215
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
I P T++ LI + S ++ M + + T+N +I+AF G E
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
D M + D T+ LINGF K + + + YN ++
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
K++ + + +F+ M D TYT +I+ +G D ++ K M++DG+
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA---QKVFKQMVSDGV 391
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/319 (20%), Positives = 132/319 (41%), Gaps = 11/319 (3%)
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
PS + LL+A + D S+ +M+ + +++TY+ LI + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALA 66
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L M P+ VT + +L+GY + ++ M+E +PD T T+I
Sbjct: 67 LLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGYRPDTITFTTLIHGL 125
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+ ++ G +P T+ +++ K+ D ++ M +
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 345 STYNNVIEA---FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+N +I++ + V DA N+ F +M +G++ + T+ LI+ + G +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNL---FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQL 242
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ + +I N +NA++ A K +E E++ M PD TY +I +
Sbjct: 243 LSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF-- 300
Query: 462 EGMNDKIYYLEQEKKTMIT 480
M+D++ +Q + M++
Sbjct: 301 -CMHDRLDKAKQMFEFMVS 318
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 94/230 (40%), Gaps = 3/230 (1%)
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+P+ N +LS K KFD + L ++ +++T N +I+ F QI +
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVIS-LGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K G EP T + L+ Y KR+ D ++ V + M ++ + T T+ +I
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALV-DQMVEMGYRPDTITFTTLIHG 124
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
A D+M G + + T+ ++NG G + + E +I +
Sbjct: 125 LFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEAD 184
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+N ++ + K + + +FK M+ P+ TY+ +I G
Sbjct: 185 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYG 234
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 180/378 (47%), Gaps = 7/378 (1%)
Query: 95 WVNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
W + + + R+ KK W + V + + S ++P + LI G+ Q A L
Sbjct: 141 WDDLINVSVQLRLNKK-WDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESL 199
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP--DVFTYSTLIKP 212
+ ++E P+ +TY L+ AYC + L++ A +L EM+NH + V Y+ I+
Sbjct: 200 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 259
Query: 213 CVDAFKFDLVELL--YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ K + E + ++ M P T T N++++ YGKA K M L + S C
Sbjct: 260 LMKR-KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQC 317
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
KP++ T +++ F G + E+ +E+ + G+EP+ +N L+ +Y + +
Sbjct: 318 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 377
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ M+ + ++YN +++A+ G + E F++M+ G+ K+ L++ ++
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
A K + V+ + + +T N++L+ + +ME++ M++ C D +
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 451 TYTIMIEAYRKEGMNDKI 468
TY I+I Y K G ++I
Sbjct: 498 TYNILINIYGKAGFLERI 515
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 149/323 (46%), Gaps = 4/323 (1%)
Query: 141 LLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ 200
L+ + G A +F M + C P+ ETY ++ Y +++ ++ + EM++H C+
Sbjct: 260 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ-CK 318
Query: 201 PDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKV 260
P++ TY+ L+ + E ++E + + P+ N ++ Y +AG +
Sbjct: 319 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG-YPYGAAE 377
Query: 261 LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
+ S+++ C+PD + N ++ +G G E +E+ + GI P ++ +L+ AY
Sbjct: 378 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 437
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
K R K +++ M + T N+++ + +G ME +M AD
Sbjct: 438 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 497
Query: 381 TFCCLINGFANAGLFHKVIST-VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
T+ LIN + AG ++ V+L EK + + + + A ++ + ++ VF+
Sbjct: 498 TYNILINIYGKAGFLERIEELFVELKEK-NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 556
Query: 440 MKDNQCPPDDTTYTIMIEAYRKE 462
M D+ C PD T +++ A E
Sbjct: 557 MIDSGCAPDGGTAKVLLSACSSE 579
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 6/266 (2%)
Query: 218 KFDLVELLYEDMAARS-IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
K+D + L+ E + +S P+ + N+++ YG+ ++ + E + +LES P T
Sbjct: 156 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDT 214
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET---RTFNILI-GAYGKKRMYDKMSTVM 332
+I + G I+ E + +N + P+T +N I G +K ++ V
Sbjct: 215 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 274
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ M++ + TT TYN +I + + + +MR+ K + T+ L+N FA
Sbjct: 275 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 334
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
GL K + ++ + + YNA++ + ++A +F M+ C PD +Y
Sbjct: 335 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 394
Query: 453 TIMIEAYRKEGMNDKIYYLEQEKKTM 478
IM++AY + G++ + +E K +
Sbjct: 395 NIMVDAYGRAGLHSDAEAVFEEMKRL 420
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 129 bits (324), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/378 (24%), Positives = 180/378 (47%), Gaps = 7/378 (1%)
Query: 95 WVNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
W + + + R+ KK W + V + + S ++P + LI G+ Q A L
Sbjct: 119 WDDLINVSVQLRLNKK-WDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESL 177
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP--DVFTYSTLIKP 212
+ ++E P+ +TY L+ AYC + L++ A +L EM+NH + V Y+ I+
Sbjct: 178 YVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEG 237
Query: 213 CVDAFKFDLVELL--YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ K + E + ++ M P T T N++++ YGKA K M L + S C
Sbjct: 238 LMKR-KGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASK-SYMSWKLYCEMRSHQC 295
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
KP++ T +++ F G + E+ +E+ + G+EP+ +N L+ +Y + +
Sbjct: 296 KPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAE 355
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ M+ + ++YN +++A+ G + E F++M+ G+ K+ L++ ++
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
A K + V+ + + +T N++L+ + +ME++ M++ C D +
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 451 TYTIMIEAYRKEGMNDKI 468
TY I+I Y K G ++I
Sbjct: 476 TYNILINIYGKAGFLERI 493
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 149/323 (46%), Gaps = 4/323 (1%)
Query: 141 LLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ 200
L+ + G A +F M + C P+ ETY ++ Y +++ ++ + EM++H C+
Sbjct: 238 LMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQ-CK 296
Query: 201 PDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKV 260
P++ TY+ L+ + E ++E + + P+ N ++ Y +AG +
Sbjct: 297 PNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAG-YPYGAAE 355
Query: 261 LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
+ S+++ C+PD + N ++ +G G E +E+ + GI P ++ +L+ AY
Sbjct: 356 IFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYS 415
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
K R K +++ M + T N+++ + +G ME +M AD
Sbjct: 416 KARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFTKMEKILAEMENGPCTADIS 475
Query: 381 TFCCLINGFANAGLFHKVIST-VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
T+ LIN + AG ++ V+L EK + + + + A ++ + ++ VF+
Sbjct: 476 TYNILINIYGKAGFLERIEELFVELKEK-NFRPDVVTWTSRIGAYSRKKLYVKCLEVFEE 534
Query: 440 MKDNQCPPDDTTYTIMIEAYRKE 462
M D+ C PD T +++ A E
Sbjct: 535 MIDSGCAPDGGTAKVLLSACSSE 557
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 123/266 (46%), Gaps = 6/266 (2%)
Query: 218 KFDLVELLYEDMAARS-IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
K+D + L+ E + +S P+ + N+++ YG+ ++ + E + +LES P T
Sbjct: 134 KWDSIILVCEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYV-PTEDT 192
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET---RTFNILI-GAYGKKRMYDKMSTVM 332
+I + G I+ E + +N + P+T +N I G +K ++ V
Sbjct: 193 YALLIKAYCMAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVF 252
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ M++ + TT TYN +I + + + +MR+ K + T+ L+N FA
Sbjct: 253 QRMKRDRCKPTTETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFARE 312
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
GL K + ++ + + YNA++ + ++A +F M+ C PD +Y
Sbjct: 313 GLCEKAEEIFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASY 372
Query: 453 TIMIEAYRKEGMNDKIYYLEQEKKTM 478
IM++AY + G++ + +E K +
Sbjct: 373 NIMVDAYGRAGLHSDAEAVFEEMKRL 398
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 153/332 (46%), Gaps = 2/332 (0%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
KL+ L + G+P A +F T+IEEG PS TYT L+ A R S++++++ +
Sbjct: 324 KLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKN 383
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
L +PD ++ +I ++ D ++E M P T N ++ GYGK GK ++
Sbjct: 384 GL-KPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEE 442
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
++L ML +P+ T N ++ + N +I+ K +++G++P+ TFN L
Sbjct: 443 SSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLA 502
Query: 317 GAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
AY + ++ M + T ++ + + G + F +M+ G+
Sbjct: 503 KAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGV 562
Query: 376 KADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMER 435
+ F LI GF N V V L E+F + + ++ +++A + D+ E
Sbjct: 563 HPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEE 622
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
++ M + PD ++I+ + Y + G +K
Sbjct: 623 IYTDMLEGGIDPDIHAFSILAKGYARAGEPEK 654
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 151/337 (44%), Gaps = 1/337 (0%)
Query: 124 EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
E + +P + +I +SG +A ++F M E GC P+ T+ L+ Y + L
Sbjct: 381 EKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKL 440
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
+E+ +L+ M + QP+ T + L++ + K + + M + + P+ VT N
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
+ Y + G E ++ + KP+V T TI++ + G+++ +++ + +
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G+ P FN LI + D + V++ M + T++ ++ A++ VGD K
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
E + M G+ D F L G+A AG K + KF + N Y ++S
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISG 680
Query: 424 CTKAEDLMEMERVFKRMKD-NQCPPDDTTYTIMIEAY 459
A ++ + +V+K+M P+ TTY +I +
Sbjct: 681 WCSAGEMKKAMQVYKKMCGIVGLSPNLTTYETLIWGF 717
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 124/316 (39%), Gaps = 39/316 (12%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE------------ 161
QA+++F+ +KE S +P T+ LI GK G+ + +L M+ +
Sbjct: 407 QAMKIFEKMKE-SGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNI 465
Query: 162 ------------------------GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
G P T+ L AY R A ++ H
Sbjct: 466 LVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHN 525
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+P+V T T++ + K + + M + PN N ++ G+ D +
Sbjct: 526 KVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGV 585
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+V+ ++E KPDV T +T+++ + ++G + E+ Y GI+P+ F+IL
Sbjct: 586 GEVV-DLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAK 644
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA-EGMK 376
Y + +K ++ MRK Y +I + G+ K + +M G+
Sbjct: 645 GYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLS 704
Query: 377 ADSKTFCCLINGFANA 392
+ T+ LI GF A
Sbjct: 705 PNLTTYETLIWGFGEA 720
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/299 (18%), Positives = 116/299 (38%), Gaps = 38/299 (12%)
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
DV + + L+ ++ + ++ + P+ +T +++ + F + ++
Sbjct: 318 DVRSRTKLMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLI 377
Query: 262 SSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK 321
S +E KPD N II+ G +D K +EK + G +P TFN LI YGK
Sbjct: 378 SK-VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGK 436
Query: 322 KRMYDKMSTVMEYM-----------------------RKLQFPWT-------------TS 345
++ S +++ M RK++ W
Sbjct: 437 IGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVV 496
Query: 346 TYNNVIEAFTDVGDAKNME-YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
T+N + +A+ +G E +M +K + +T ++NG+ G + +
Sbjct: 497 TFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYR 556
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
++ + N +N+++ D+ + V M++ PD T++ ++ A+ G
Sbjct: 557 MKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVG 615
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 55/110 (50%)
Query: 143 GKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPD 202
++G+P +A Q+ M + G P+ YT +++ +C + + +A + +M P+
Sbjct: 647 ARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGIVGLSPN 706
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
+ TY TLI +A + E L +DM ++++P T ++ G+ G
Sbjct: 707 LTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIG 756
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 181/406 (44%), Gaps = 41/406 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+AL++ M + K T + +I L SG+ A LF + + G P Y AL
Sbjct: 287 KALQLLGMAQATGL-SAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNAL 345
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L Y ++ L +A S+++EM+ + PD TYS LI V+A +++ ++ ++M A
Sbjct: 346 LKGYVKTGPLKDAESMVSEMEKRGVS-PDEHTYSLLIDAYVNAGRWESARIVLKEMEAGD 404
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ PN+ + +L+G+ G++ + +VL M +S KPD N +I FG +D
Sbjct: 405 VQPNSFVFSRLLAGFRDRGEWQKTFQVLKEM-KSIGVKPDRQFYNVVIDTFGKFNCLDHA 463
Query: 294 EKWYEKFRNFGIEPE-----------------------------------TRTFNILIGA 318
+++ + GIEP+ T+NI+I +
Sbjct: 464 MTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINS 523
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
YG + +D M ++ M+ T+ +++ + G + ++M++ G+K
Sbjct: 524 YGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPS 583
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
S + LIN +A GL + ++ ++ + + N++++A + E V +
Sbjct: 584 STMYNALINAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQ 643
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIK 484
MK+N PD TYT +++A + K+ + +E MI G K
Sbjct: 644 YMKENGVKPDVVTYTTLMKALIRVDKFQKVPVVYEE---MIMSGCK 686
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 161/351 (45%), Gaps = 9/351 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A V L++H+ E Y LI LG+S + + A ++ + +P TY AL+
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEA-----FLLSQKQTLTPLTYNALI 204
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELL--YEDMAAR 232
A R+N +++A +++ +M+ Q D YS +I+ + K D V LL Y+++
Sbjct: 205 GACARNNDIEKALNLIAKMRQDGY-QSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIERD 263
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
+ + N ++ G+ K+G + ++L M ++T T+ +IIS + G+
Sbjct: 264 KLELDVQLVNDIIMGFAKSGDPSKALQLLG-MAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
E +E+ R GI+P TR +N L+ Y K +++ M K TY+ +I+
Sbjct: 323 AEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLID 382
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
A+ + G ++ +M A ++ +S F L+ GF + G + K ++ + +
Sbjct: 383 AYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKP 442
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ FYN V+ K L F RM PD T+ +I+ + K G
Sbjct: 443 DRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHG 493
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/398 (22%), Positives = 174/398 (43%), Gaps = 38/398 (9%)
Query: 98 TVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTT 157
T+ +S + + L+A +F+ L++ S +P+ Y L+ K+G A + +
Sbjct: 306 TLVSIISALADSGRTLEAEALFEELRQ-SGIKPRTRAYNALLKGYVKTGPLKDAESMVSE 364
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTL-------- 209
M + G P TY+ L+ AY + + A +L EM+ + QP+ F +S L
Sbjct: 365 MEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDV-QPNSFVFSRLLAGFRDRG 423
Query: 210 ----------------IKP-------CVDAF-KFDLVE---LLYEDMAARSIMPNTVTQN 242
+KP +D F KF+ ++ ++ M + I P+ VT N
Sbjct: 424 EWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWN 483
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
++ + K G+ E++ +M E C P T N +I+ +G+ + D M++ K ++
Sbjct: 484 TLIDCHCKHGRHIVAEEMFEAM-ERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKS 542
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
GI P T L+ YGK ++ +E M+ + +++ YN +I A+ G ++
Sbjct: 543 QGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQ 602
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
F M ++G+K LIN F + + +Q ++ + + Y ++
Sbjct: 603 AVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMK 662
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR 460
A + + ++ V++ M + C PD +++ A R
Sbjct: 663 ALIRVDKFQKVPVVYEEMIMSGCKPDRKARSMLRSALR 700
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/313 (20%), Positives = 135/313 (43%), Gaps = 18/313 (5%)
Query: 186 AFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVL 245
A+++++ ++ H LC YS LI + K LL + +++ P +T N ++
Sbjct: 150 AYAVVSWLQKHNLCFSYELLYSILIHALGRSEKLYEAFLLSQK---QTLTP--LTYNALI 204
Query: 246 SGYGKAGKFDQMEKVLS--SMLESTSCKPDVWTMNTIISVFGNMGQID--MMEKWYEKFR 301
G + + +EK L+ + + + D + +I +ID M+ + Y++
Sbjct: 205 ---GACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIE 261
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+E + + N +I + K K ++ + T+T ++I A D G
Sbjct: 262 RDKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTL 321
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
E F+++R G+K ++ + L+ G+ G S V EK ++ + Y+ ++
Sbjct: 322 EAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITD 481
A A V K M+ P+ ++ ++ +R G K + + +E K++
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSI--- 438
Query: 482 GIKVSQPEDEFFS 494
G+K P+ +F++
Sbjct: 439 GVK---PDRQFYN 448
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 179/389 (46%), Gaps = 9/389 (2%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
LS +Q+ +AL F+++K P T+ +I L K GQ +A LF +M E+
Sbjct: 255 LSAYKSGRQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 313
Query: 163 --CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKF 219
C P T+T+++ Y ++ ++ M L +P++ +Y+ L+ V
Sbjct: 314 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL-KPNIVSYNALMGAYAVHGMSG 372
Query: 220 DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
+ +L D+ I+P+ V+ +L+ YG++ + + ++V M+ KP+V T N
Sbjct: 373 TALSVL-GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNA 430
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
+I +G+ G + + + + GI+P + L+ A + + + TV+ +
Sbjct: 431 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 490
Query: 340 FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVI 399
T+ YN+ I ++ + + + + MR + +KADS TF LI+G + + I
Sbjct: 491 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 550
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
S ++ E I Y++VL A +K + E E +F +MK C PD YT M+ AY
Sbjct: 551 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 610
Query: 460 RKEGMNDKI--YYLEQEKKTMITDGIKVS 486
K +LE E + D I S
Sbjct: 611 NASEKWGKACELFLEMEANGIEPDSIACS 639
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 170/430 (39%), Gaps = 73/430 (16%)
Query: 116 LEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLA 175
+ VF +K Y + Y +I L + +AR LF M + C P ETY AL+
Sbjct: 127 VNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALIN 186
Query: 176 AYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
A+ R+ A +++++M + P TY+ LI C + + + + M +
Sbjct: 187 AHGRAGQWRWAMNLMDDMLRAAIA-PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVG 245
Query: 236 PNTVTQNIVLSGY-----------------------------------GKAGKFDQMEKV 260
P+ VT NIVLS Y K G+ Q +
Sbjct: 246 PDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDL 305
Query: 261 LSSMLESTS-CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA- 318
+SM E + C+PDV T +I+ ++ G+I+ +E G++P ++N L+GA
Sbjct: 306 FNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAY 365
Query: 319 ----------------------------------YGKKRMYDKMSTVMEYMRKLQFPWTT 344
YG+ R K V MRK +
Sbjct: 366 AVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNV 425
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
TYN +I+A+ G F QM +G+K + + C L+ + + V + +
Sbjct: 426 VTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSA 485
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY-RKEG 463
A+ I NT YN+ + + A +L + +++ M+ + D T+TI+I R
Sbjct: 486 AQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSK 545
Query: 464 MNDKIYYLEQ 473
+ I YL++
Sbjct: 546 YPEAISYLKE 555
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 156/394 (39%), Gaps = 73/394 (18%)
Query: 114 QALEVFDMLKE-HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
QAL++F+ ++E + P T+ ++ L G+ R +F M+ EG P+ +Y A
Sbjct: 301 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 360
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ AY + A S+L ++K + + PDV +Y+ L+ + + + ++ M
Sbjct: 361 LMGAYAVHGMSGTALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 419
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM--------------- 277
PN VT N ++ YG G + ++ M E KP+V ++
Sbjct: 420 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVN 478
Query: 278 --------------------NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
N+ I + N +++ Y+ R ++ ++ TF ILI
Sbjct: 479 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 538
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
+ Y + + ++ M L P T Y++V+ A++ G E F+QM+ G +
Sbjct: 539 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 598
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
D VI+ Y ++L A +E + +F
Sbjct: 599 D-------------------VIA----------------YTSMLHAYNASEKWGKACELF 623
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
M+ N PD + ++ A+ K G ++ L
Sbjct: 624 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 657
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/427 (20%), Positives = 162/427 (37%), Gaps = 93/427 (21%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL------------FT 156
+K W EV D L + +E +G + + P R+L F
Sbjct: 73 QKDW-SVSEVVDRLMALNRWEEVDGVLNSWVGRFARKNFPVLIRELSRRGCIELCVNVFK 131
Query: 157 TM-IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M I++ + Y ++ + R N +D+A + EM+ C+PD TY LI
Sbjct: 132 WMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWS-CKPDAETYDALINAHGR 190
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
A ++ L +DM +I P+ T N +++ G +G + + +V CK
Sbjct: 191 AGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGNWREALEV---------CK---- 237
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
K + G+ P+ T NI++ AY R Y K + E M
Sbjct: 238 -----------------------KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELM 274
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDA----------------------------------- 360
+ + T+T+N +I + +G +
Sbjct: 275 KGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKG 334
Query: 361 --KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
+N F+ M AEG+K + ++ L+ +A G+ +S + ++ I + Y
Sbjct: 335 EIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYT 394
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQEKKT 477
+L++ ++ + + VF M+ + P+ TY +I+AY G + + + Q
Sbjct: 395 CLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ---- 450
Query: 478 MITDGIK 484
M DGIK
Sbjct: 451 MEQDGIK 457
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 154/419 (36%), Gaps = 120/419 (28%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL V +K++ P +Y L+ G+S QP +A+++F M +E P+ TY AL+
Sbjct: 374 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 432
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC--------------------- 213
AY + L EA I +M+ + +P+V + TL+ C
Sbjct: 433 DAYGSNGFLAEAVEIFRQMEQDGI-KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 491
Query: 214 --------------VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG------------ 247
++A + + LY+ M + + ++VT I++SG
Sbjct: 492 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 551
Query: 248 -----------------------YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
Y K G+ + E + + M + C+PDV +++ +
Sbjct: 552 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAY 610
Query: 285 GNMGQIDMMEKWYEKFRNF------GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
+ EKW + F GIEP++ + L+ A+ K + +M+ MR+
Sbjct: 611 ------NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 664
Query: 339 QFPWTTSTY-----------------------------------NNVIEAFTDVGDAKNM 363
+ P+T + + N ++ F G + M
Sbjct: 665 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 724
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
F ++ A G+ + KT+ L+ G + K I ++ I + Y ++S
Sbjct: 725 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 783
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 127 bits (320), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 179/389 (46%), Gaps = 9/389 (2%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
LS +Q+ +AL F+++K P T+ +I L K GQ +A LF +M E+
Sbjct: 123 LSAYKSGRQYSKALSYFELMKGAKV-RPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKR 181
Query: 163 --CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKF 219
C P T+T+++ Y ++ ++ M L +P++ +Y+ L+ V
Sbjct: 182 AECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGL-KPNIVSYNALMGAYAVHGMSG 240
Query: 220 DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
+ +L D+ I+P+ V+ +L+ YG++ + + ++V M+ KP+V T N
Sbjct: 241 TALSVL-GDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFL-MMRKERRKPNVVTYNA 298
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
+I +G+ G + + + + GI+P + L+ A + + + TV+ +
Sbjct: 299 LIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRG 358
Query: 340 FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVI 399
T+ YN+ I ++ + + + + MR + +KADS TF LI+G + + I
Sbjct: 359 INLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAI 418
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
S ++ E I Y++VL A +K + E E +F +MK C PD YT M+ AY
Sbjct: 419 SYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAY 478
Query: 460 RKEGMNDKI--YYLEQEKKTMITDGIKVS 486
K +LE E + D I S
Sbjct: 479 NASEKWGKACELFLEMEANGIEPDSIACS 507
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 167/424 (39%), Gaps = 73/424 (17%)
Query: 122 LKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSN 181
+K Y + Y +I L + +AR LF M + C P ETY AL+ A+ R+
Sbjct: 1 MKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAG 60
Query: 182 LLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
A +++++M + P TY+ LI C + + + + M + P+ VT
Sbjct: 61 QWRWAMNLMDDMLRAAIA-PSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTH 119
Query: 242 NIVLSGY-----------------------------------GKAGKFDQMEKVLSSMLE 266
NIVLS Y K G+ Q + +SM E
Sbjct: 120 NIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMRE 179
Query: 267 STS-CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA------- 318
+ C+PDV T +I+ ++ G+I+ +E G++P ++N L+GA
Sbjct: 180 KRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMS 239
Query: 319 ----------------------------YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
YG+ R K V MRK + TYN +
Sbjct: 240 GTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNAL 299
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
I+A+ G F QM +G+K + + C L+ + + V + + A+ I
Sbjct: 300 IDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY-RKEGMNDKIY 469
NT YN+ + + A +L + +++ M+ + D T+TI+I R + I
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 470 YLEQ 473
YL++
Sbjct: 420 YLKE 423
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 156/394 (39%), Gaps = 73/394 (18%)
Query: 114 QALEVFDMLKE-HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
QAL++F+ ++E + P T+ ++ L G+ R +F M+ EG P+ +Y A
Sbjct: 169 QALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNA 228
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ AY + A S+L ++K + + PDV +Y+ L+ + + + ++ M
Sbjct: 229 LMGAYAVHGMSGTALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKE 287
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM--------------- 277
PN VT N ++ YG G + ++ M E KP+V ++
Sbjct: 288 RRKPNVVTYNALIDAYGSNGFLAEAVEIFRQM-EQDGIKPNVVSVCTLLAACSRSKKKVN 346
Query: 278 --------------------NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
N+ I + N +++ Y+ R ++ ++ TF ILI
Sbjct: 347 VDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILIS 406
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
+ Y + + ++ M L P T Y++V+ A++ G E F+QM+ G +
Sbjct: 407 GSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEP 466
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
D VI+ Y ++L A +E + +F
Sbjct: 467 D-------------------VIA----------------YTSMLHAYNASEKWGKACELF 491
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
M+ N PD + ++ A+ K G ++ L
Sbjct: 492 LEMEANGIEPDSIACSALMRAFNKGGQPSNVFVL 525
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/355 (21%), Positives = 139/355 (39%), Gaps = 79/355 (22%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
+ Y ++ + R N +D+A + EM+ C+PD TY LI A ++ L +
Sbjct: 12 DIYNMMIRLHARHNWVDQARGLFFEMQKWS-CKPDAETYDALINAHGRAGQWRWAMNLMD 70
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
DM +I P+ T N +++ G +G + + +V CK
Sbjct: 71 DMLRAAIAPSRSTYNNLINACGSSGNWREALEV---------CK---------------- 105
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
K + G+ P+ T NI++ AY R Y K + E M+ + T+T+
Sbjct: 106 -----------KMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 348 NNVIEAFTDVGDA-------------------------------------KNMEYTFDQM 370
N +I + +G + +N F+ M
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
AEG+K + ++ L+ +A G+ +S + ++ I + Y +L++ ++
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 431 MEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQEKKTMITDGIK 484
+ + VF M+ + P+ TY +I+AY G + + + Q M DGIK
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQ----MEQDGIK 325
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/419 (19%), Positives = 154/419 (36%), Gaps = 120/419 (28%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL V +K++ P +Y L+ G+S QP +A+++F M +E P+ TY AL+
Sbjct: 242 ALSVLGDIKQNGII-PDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALI 300
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC--------------------- 213
AY + L EA I +M+ + +P+V + TL+ C
Sbjct: 301 DAYGSNGFLAEAVEIFRQMEQDGI-KPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGI 359
Query: 214 --------------VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG------------ 247
++A + + LY+ M + + ++VT I++SG
Sbjct: 360 NLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAIS 419
Query: 248 -----------------------YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
Y K G+ + E + + M + C+PDV +++ +
Sbjct: 420 YLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQM-KMAGCEPDVIAYTSMLHAY 478
Query: 285 GNMGQIDMMEKWYEKFRNF------GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
+ EKW + F GIEP++ + L+ A+ K + +M+ MR+
Sbjct: 479 ------NASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVFVLMDLMREK 532
Query: 339 QFPWTTSTY-----------------------------------NNVIEAFTDVGDAKNM 363
+ P+T + + N ++ F G + M
Sbjct: 533 EIPFTGAVFFEIFSACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAM 592
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
F ++ A G+ + KT+ L+ G + K I ++ I + Y ++S
Sbjct: 593 MKLFYKIIASGVGINLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIIS 651
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 100/401 (24%), Positives = 178/401 (44%), Gaps = 44/401 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ + D + E+ +P TY ++ ++ KSGQ A +L M E Y+ +
Sbjct: 211 EAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSII 269
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ C+ LD AF++ NEM+ + ++ TY+ LI +A ++D L DM R
Sbjct: 270 IDGLCKHGSLDNAFNLFNEMEMKGI-TTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK 328
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
I PN VT ++++ + K GK + E++ M+ PD T ++I F +D
Sbjct: 329 INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHR-GIAPDTITYTSLIDGFCKENHLDKA 387
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT---TSTYNNV 350
+ + + G +P RTFNILI Y K +++ +E RK+ T TYN +
Sbjct: 388 NQMVDLMVSKGCDPNIRTFNILINGYCKA---NRIDDGLELFRKMSLRGVVADTVTYNTL 444
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
I+ F ++G + F +M + + + T+ L++G + G K + + EK ++
Sbjct: 445 IQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKM 504
Query: 411 AENTTFYNAVLSA---CTKAED--------------------------------LMEMER 435
+ YN ++ +K +D L E E
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+F++M+++ PD TY I+I A+ +G K L +E K
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 125 HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLD 184
H P TY LI K +A Q+ M+ +GCDP+ T+ L+ YC++N +D
Sbjct: 361 HRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRID 420
Query: 185 EAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIV 244
+ + +M + D TY+TLI+ + K ++ + L+++M +R + PN VT I+
Sbjct: 421 DGLELFRKMSLRGVV-ADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKIL 479
Query: 245 LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 304
L G G+ ++ ++ +E + + D+ N II N ++D + G
Sbjct: 480 LDGLCDNGESEKALEIFEK-IEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
++P +T+NI+IG KK + + M + TYN +I A GDA
Sbjct: 539 VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSV 598
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGL 394
++++ G D+ T +I+ ++ L
Sbjct: 599 KLIEELKRCGFSVDASTIKMVIDMLSDGRL 628
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 138/322 (42%), Gaps = 12/322 (3%)
Query: 150 RARQL---FTTM---IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM--KNHPLCQP 201
R R+L F+ M I+ G +P+ T++ L+ C + EA +++ M H +P
Sbjct: 135 RCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGH---KP 191
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
D+ T +TL+ + K LL + M PN VT VL+ K+G+ ++L
Sbjct: 192 DLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELL 251
Query: 262 SSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK 321
M E + K D + II G +D + + GI T+NILIG +
Sbjct: 252 RKM-EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCN 310
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
+D + ++ M K + T++ +I++F G + E +M G+ D+ T
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 382 FCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMK 441
+ LI+GF K V L N +N +++ KA + + +F++M
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMS 430
Query: 442 DNQCPPDDTTYTIMIEAYRKEG 463
D TY +I+ + + G
Sbjct: 431 LRGVVADTVTYNTLIQGFCELG 452
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/360 (21%), Positives = 150/360 (41%), Gaps = 45/360 (12%)
Query: 113 LQALEVFDMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
++A + D+ ++ HS P + +L + K+ Q L M +G + T
Sbjct: 67 IKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTL 126
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
+ ++ +CR L AFS + + +++L YE
Sbjct: 127 SIMINCFCRCRKLCLAFSAMGK----------------------------IIKLGYE--- 155
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
PNT+T + +++G G+ + +++ M+E KPD+ T+NT+++ G+
Sbjct: 156 -----PNTITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKE 209
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ---FPWTTSTY 347
+K +G +P T+ ++ K + + ME +RK++ Y
Sbjct: 210 AEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS---GQTALAMELLRKMEERNIKLDAVKY 266
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ +I+ G N F++M +G+ + T+ LI GF NAG + ++ K
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+I N ++ ++ + K L E E + K M PD TYT +I+ + KE DK
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 87/215 (40%), Gaps = 4/215 (1%)
Query: 272 PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV 331
P V + + S Q D++ ++ GI T +I+I + + R +
Sbjct: 86 PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSA 145
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
M + KL + T T++ +I G D+M G K D T L+NG
Sbjct: 146 MGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCL 205
Query: 392 AGLFHKVISTVQLAEKFEIAENTTFYNAVLSA-CTKAEDLMEMERVFKRMKDNQCPPDDT 450
+G + + + ++ N Y VL+ C + + ME + ++M++ D
Sbjct: 206 SGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAME-LLRKMEERNIKLDAV 264
Query: 451 TYTIMIEAYRKEGMNDKIYYL--EQEKKTMITDGI 483
Y+I+I+ K G D + L E E K + T+ I
Sbjct: 265 KYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNII 299
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 169/352 (48%), Gaps = 5/352 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHR-ARQLFTTMIEEGCDPSPE 168
+++ A EV++ + + + Y P T LI L K+G+ + ++F M E+G S +
Sbjct: 287 QRYDDAWEVYEAMDKINVY-PDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGVKWSQD 345
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
+ L+ ++C L +EA I EM+ + + + Y+TL+ + + VE L+ +
Sbjct: 346 VFGGLVKSFCDEGLKEEALVIQTEMEKKGI-RSNTIVYNTLMDAYNKSNHIEEVEGLFTE 404
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
M + + P+ T NI++ Y + + D +E +L M E +P+V + +IS +G
Sbjct: 405 MRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM-EDLGLEPNVKSYTCLISAYGRTK 463
Query: 289 QI-DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
++ DM + + + G++P + ++ LI AY ++K E M K + TY
Sbjct: 464 KMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETY 523
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+V++AF GD + + M E +K T+ L++GFA GL+ + V K
Sbjct: 524 TSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSK 583
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+ + YN +++A + ++ ++ K M PD TY+ MI A+
Sbjct: 584 MGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAF 635
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/363 (20%), Positives = 156/363 (42%), Gaps = 38/363 (10%)
Query: 139 IVLLGKSGQPHRARQLFTTM-IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
+V++G+SG + M ++E SP + L R + D +L+ + +
Sbjct: 209 LVMMGESGFVKSCLYFYEWMSLQEPSLASPRACSVLFTLLGRERMADYILLLLSNLPDKE 268
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK---- 253
+ DV Y+ I + ++D +YE M ++ P+ VT I+++ KAG+
Sbjct: 269 EFR-DVRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKE 327
Query: 254 ----FDQMEK---------------------------VLSSMLESTSCKPDVWTMNTIIS 282
F++M + V+ + +E + + NT++
Sbjct: 328 VWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMD 387
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ I+ +E + + R+ G++P T+NIL+ AY ++ D + T++ M L
Sbjct: 388 AYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEP 447
Query: 343 TTSTYNNVIEAFTDVGDAKNMEY-TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+Y +I A+ +M F +M+ G+K S ++ LI+ ++ +G K ++
Sbjct: 448 NVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYAS 507
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ K I + Y +VL A ++ D ++ ++K M + TY +++ + K
Sbjct: 508 FEEMCKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAK 567
Query: 462 EGM 464
+G+
Sbjct: 568 QGL 570
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 110/255 (43%), Gaps = 3/255 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSN-LLDEAF 187
+P TY L+ + QP L M + G +P+ ++YT L++AY R+ + D A
Sbjct: 411 KPSAATYNILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAA 470
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
MK L +P +Y+ LI + + +E+M I P+ T VL
Sbjct: 471 DAFLRMKKVGL-KPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDA 529
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ ++G ++ ++ ML K T NT++ F G +F G++P
Sbjct: 530 FRRSGDTGKLMEIWKLMLRE-KIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQP 588
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+N+L+ AY + K+ +++ M L + TY+ +I AF V D K +
Sbjct: 589 SVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYH 648
Query: 368 DQMRAEGMKADSKTF 382
M G D +++
Sbjct: 649 KMMVKSGQVPDPRSY 663
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 117/274 (42%), Gaps = 11/274 (4%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y L+ KS LFT M ++G PS TY L+ AY R D ++L EM
Sbjct: 381 VYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREM 440
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
++ L +P+V +Y+ LI K D+ + M + P++ + ++ Y +G
Sbjct: 441 EDLGL-EPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSG 499
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI-DMMEKWYEKFRNFGIEPETRT 311
++ M + KP V T +++ F G +ME W R I+ T
Sbjct: 500 WHEKAYASFEEMCKE-GIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLRE-KIKGTRIT 557
Query: 312 FNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+N L+ + K+ +Y + V+ K+ + TYN ++ A+ G + +M
Sbjct: 558 YNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMA 617
Query: 372 AEGMKADSKTFCCLINGFA------NAGLFHKVI 399
A +K DS T+ +I F A +HK++
Sbjct: 618 ALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMM 651
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
E+FR+ R +N I + YD V E M K+ T +I
Sbjct: 268 EEFRD------VRLYNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKA 321
Query: 358 G-DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF 416
G AK + F++M +G+K F L+ F + GL + + EK I NT
Sbjct: 322 GRSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIV 381
Query: 417 YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
YN ++ A K+ + E+E +F M+D P TY I+++AY + D + L +E
Sbjct: 382 YNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLRE 439
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 154/349 (44%), Gaps = 2/349 (0%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL+VFD++ + P +Y LI L + G+ A L M E+GC PS TYT L+
Sbjct: 249 ALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLI 308
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A C L+D+AF++ +EM C+P+V TY+ LI K + + M I
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRI 367
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ +T N +++GY K G+ ++L+ M E +CKP+V T N ++ +G+
Sbjct: 368 FPSVITYNALINGYCKDGRVVPAFELLTVM-EKRACKPNVRTFNELMEGLCRVGKPYKAV 426
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
++ + G+ P+ ++N+LI ++ + ++ M T+ +I AF
Sbjct: 427 HLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAF 486
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G A M +G+ D T LI+G G + ++ K I
Sbjct: 487 CKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTP 546
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
N +L +K + E + ++ P TYT +++ + G
Sbjct: 547 HSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSG 595
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/346 (21%), Positives = 131/346 (37%), Gaps = 2/346 (0%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y ++ L K+G A + +++ G T+LL +CR L +A + + M
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMS 257
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
C P+ +YS LI + + + L + M + P+T T +++ G
Sbjct: 258 KEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLI 317
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
D+ + M+ CKP+V T +I G+I+ K I P T+N
Sbjct: 318 DKAFNLFDEMIPR-GCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNA 376
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
LI Y K ++ M K T+N ++E VG + +M G
Sbjct: 377 LINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNG 436
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
+ D ++ LI+G G + + F+I + + A+++A K
Sbjct: 437 LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVAS 496
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQEKKTMI 479
M D+ T T +I+ K G D ++ LE K I
Sbjct: 497 AFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRI 542
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 143/375 (38%), Gaps = 74/375 (19%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY LI L + G+ A + M+++ PS TY AL+ YC+ + AF
Sbjct: 333 KPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFE 392
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+L M+ C+P+V T++ L++ C + V LL + M + P+ V+ N+++ G
Sbjct: 393 LLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLL-KRMLDNGLSPDIVSYNVLIDG 450
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ G + K+LSSM +PD T II+ F G+ D+ + GI
Sbjct: 451 LCREGHMNTAYKLLSSM-NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISL 509
Query: 308 ETRTFNILIGAY---GKKR-----------------------MYDKMS---------TVM 332
+ T LI GK R + D +S ++
Sbjct: 510 DEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAML 569
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ KL + TY +++ GD + M+ G + + +ING
Sbjct: 570 GKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQF 629
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + E E E++ M+D+ P+ TY
Sbjct: 630 G--------------------------------RVE---EAEKLLSAMQDSGVSPNHVTY 654
Query: 453 TIMIEAYRKEGMNDK 467
T+M++ Y G D+
Sbjct: 655 TVMVKGYVNNGKLDR 669
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 158/399 (39%), Gaps = 17/399 (4%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
+K+ L+ + FD L+E + Y L++ L K A + M +G
Sbjct: 137 EKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMI 196
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
Y ++ A C++ + A ++++ S L+ C D +++ D
Sbjct: 197 DYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF--D 254
Query: 229 MAARSI--MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ ++ + PN+V+ +I++ G + G+ ++ + M E C+P T +I +
Sbjct: 255 VMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEK-GCQPSTRTYTVLIKALCD 313
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
G ID +++ G +P T+ +LI + ++ + V M K + + T
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
YN +I + G M K + +TF L+ G G +K + ++
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
++ + YN ++ + + ++ M PD T+T +I A+ K+G D
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKAD 493
Query: 467 -----------KIYYLEQEKKTMITDGI-KVSQPEDEFF 493
K L++ T + DG+ KV + D F
Sbjct: 494 VASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
G PS TYT L+ RS + +F IL MK C P+V+ Y+ +I + +
Sbjct: 576 GLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSG-CLPNVYPYTIIINGLCQFGRVEE 634
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLE 266
E L M + PN VT +++ GY GK D+ + + +M+E
Sbjct: 635 AEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 175/415 (42%), Gaps = 36/415 (8%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+ T++ L+ K+ A+ + D + E Y P T+ LI L + A L
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLC-- 199
M++ GC P+ TY ++ C+ D A ++LN+M+ LC
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273
Query: 200 ------------------QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
+P+V TYS+LI ++ L DM + I PN VT
Sbjct: 274 RHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTF 333
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N ++ + K GKF + EK+ M++ S PD++T N++++ F ++D ++ +E
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMIKR-SIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+ P+ T+N LI + K + + + + M T TY +I+ GD
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
N + F QM ++G+ D T+ L++G N G K + +K EI + Y ++
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
KA + + +F + P+ TY MI + + + Y L ++ K
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMK 567
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 157/377 (41%), Gaps = 15/377 (3%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
I + +Q LE+ H Y TY LI + Q A L M++ G +PS
Sbjct: 105 ISLGEKMQRLEIV-----HGLY-----TYNILINCFCRRSQISLALALLGKMMKLGYEPS 154
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
T ++LL YC + +A +++++M +PD T++TLI K L
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ M R PN VT +V++G K G D +L+ M E+ + DV NTII
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM-EAAKIEADVVIFNTIIDSLCK 272
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
+D +++ GI P T++ LI + S ++ M + + T
Sbjct: 273 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
+N +I+AF G E +D M + D T+ L+NGF K +
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+ + YN ++ K++ + + +F+ M D TYT +I+ +G D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 467 KIYYLEQEKKTMITDGI 483
++ K M++DG+
Sbjct: 453 NA---QKVFKQMVSDGV 466
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 161/359 (44%), Gaps = 6/359 (1%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ + L + + AL +F ++ P TY LI L G+ A QL +
Sbjct: 264 NTIIDSLCKY---RHVDDALNLFKEMETKGI-RPNVVTYSSLISCLCSYGRWSDASQLLS 319
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
MIE+ +P+ T+ AL+ A+ + EA + ++M + PD+FTY++L+
Sbjct: 320 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI-DPDIFTYNSLVNGFCMH 378
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
+ D + ++E M ++ P+ VT N ++ G+ K+ + + ++ M D T
Sbjct: 379 DRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREM-SHRGLVGDTVT 437
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
T+I + G D +K +++ + G+ P+ T++IL+ +K V +YM+
Sbjct: 438 YTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 497
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
K + Y +IE G + F + +G+K + T+ +I+G + L
Sbjct: 498 KSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQ 557
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+ + ++ ++ N+ YN ++ A + D + + M+ + D +T ++
Sbjct: 558 EAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/333 (20%), Positives = 138/333 (41%), Gaps = 11/333 (3%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A LF M++ PS + LL+A + D S+ +M+ + ++TY+ LI
Sbjct: 69 AIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHG-LYTYNILI 127
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ L L M P+ VT + +L+GY + ++ M+E
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-MGY 186
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
+PD T T+I + ++ G +P T+ +++ K+ D
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALN 246
Query: 331 VMEYMRKLQFPWTTSTYNNVIEA---FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
++ M + +N +I++ + V DA N+ F +M +G++ + T+ LI+
Sbjct: 247 LLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL---FKEMETKGIRPNVVTYSSLIS 303
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
+ G + + + +I N +NA++ A K +E E+++ M P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363
Query: 448 DDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMIT 480
D TY ++ + M+D++ +Q + M++
Sbjct: 364 DIFTYNSLVNGF---CMHDRLDKAKQMFEFMVS 393
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 105/259 (40%), Gaps = 3/259 (1%)
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
Y +++ + K D L+ M +P+ V N +LS K KFD + L +
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVIS-LGEKM 111
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK-KRM 324
+ ++T N +I+ F QI + K G EP T + L+ Y KR+
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
D ++ V + M ++ + T T+ +I A D+M G + + T+
Sbjct: 172 SDAVALV-DQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
++NG G ++ + E +I + +N ++ + K + + +FK M+
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290
Query: 445 CPPDDTTYTIMIEAYRKEG 463
P+ TY+ +I G
Sbjct: 291 IRPNVVTYSSLISCLCSYG 309
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 125 bits (315), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 173/406 (42%), Gaps = 36/406 (8%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+ T++ L+ K+ A+ + D + E Y P T+ LI L + A L
Sbjct: 155 IVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLFLHNKASEAVALV 213
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLC-- 199
M++ GC P+ TY ++ C+ +D AF++LN+M+ LC
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273
Query: 200 ------------------QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
+P+V TYS+LI + ++ L DM R I PN VT
Sbjct: 274 RHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTF 333
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N ++ + K GK + EK+ M++ S PD++T +++I+ F ++D + +E
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+ P T+N LI + K + D+ + M + T TY +I F D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
N + F QM ++G+ + T+ L++G G K + + ++ ++ YN ++
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
KA + + +F + PD Y MI + ++G+ ++
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEE 558
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 154/361 (42%), Gaps = 14/361 (3%)
Query: 125 HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLD 184
H+ Y TY LI + Q A L M++ G +PS T ++LL YC +
Sbjct: 118 HNLY-----TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 185 EAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIV 244
+A +++++M +PD T++TLI K L + M R PN VT +V
Sbjct: 173 DAVALVDQMVEMGY-RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 245 LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 304
++G K G D +L+ M E+ + +V +T+I D + + N G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKM-EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
+ P T++ LI + S ++ M + + T+N +I+AF G E
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
+D+M + D T+ LINGF + +L + N YN +++
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGF 410
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY--RKEGMNDKIYYLEQEKKTMITDG 482
KA+ + E +F+ M + TYT +I + ++ N ++ + K M++DG
Sbjct: 411 CKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF-----KQMVSDG 465
Query: 483 I 483
+
Sbjct: 466 V 466
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 124/273 (45%), Gaps = 5/273 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
++W A + + E P T+ LI K G+ A +L+ MI+ DP T
Sbjct: 309 ERWSDASRLLSDMIERKI-NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFT 367
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
Y++L+ +C + LDEA + M + C P+V TY+TLI A + D L+ +M
Sbjct: 368 YSSLINGFCMHDRLDEAKHMFELMISKD-CFPNVVTYNTLINGFCKAKRIDEGVELFREM 426
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
+ R ++ NTVT ++ G+ +A D + V M+ S P++ T NT++ G+
Sbjct: 427 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPNIMTYNTLLDGLCKNGK 485
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
++ +E + +EP T+NI+I G ++ D K P YN
Sbjct: 486 LEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP-DVIIYN 544
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
+I F G + + F +MR +G DS T
Sbjct: 545 TMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 128/296 (43%), Gaps = 6/296 (2%)
Query: 170 YTALLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
Y +L S LD+A + M K+ PL P +F ++ L+ KFDLV L E
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPL--PSIFEFNKLLSAIAKMKKFDLVISLGEK 110
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
M I N T NI+++ + + + +L M++ +P + T++++++ + +
Sbjct: 111 MQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMK-LGYEPSIVTLSSLLNGYCHGK 169
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
+I ++ G P+T TF LI G + + + ++ V +++ P TY
Sbjct: 170 RISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTY 228
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
V+ GD ++M A ++A+ + +I+ ++ E
Sbjct: 229 GVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMEN 288
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ N Y++++S E + R+ M + + P+ T+ +I+A+ KEG
Sbjct: 289 KGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEG 344
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 168/380 (44%), Gaps = 38/380 (10%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ + D + E F +P E TY ++ ++ KSGQ A +L M E Y+ ++
Sbjct: 212 AVVLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ LD AF++ NEM+ + D+ TY+TLI +A ++D L DM R I
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGF-KADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI 329
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN VT ++++ + K GK + +++L M++ P+ T N++I F +++
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTITYNSLIDGFCKENRLEEAI 388
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ + + G +P+ TFNILI Y K D + M T TYN +++ F
Sbjct: 389 QMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGF 448
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE----- 409
G + + F +M + ++ D ++ L++G + G K + EK +
Sbjct: 449 CQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 410 ------------------------------IAENTTFYNAVLSACTKAEDLMEMERVFKR 439
+ + YN ++S + + L + + +F++
Sbjct: 509 GIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRK 568
Query: 440 MKDNQCPPDDTTYTIMIEAY 459
M + PD+ TY I+I A+
Sbjct: 569 MTEEGHAPDELTYNILIRAH 588
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 142/336 (42%), Gaps = 2/336 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP + L+ L + A +L M+E G P+ T L+ C + + +A
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++ M QP+ TY ++ + + L L M R+I + V +I++ G
Sbjct: 214 VLIDRMVETGF-QPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
K G D + + M E K D+ T NT+I F N G+ D K I P
Sbjct: 273 LCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISP 331
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
TF++LI ++ K+ + +++ M + T TYN++I+ F +
Sbjct: 332 NVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
D M ++G D TF LING+ A + + + NT YN ++ ++
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L +++F+ M + PD +Y I+++ G
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNG 487
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 128/281 (45%), Gaps = 5/281 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY LI K + A Q+ MI +GCDP T+ L+ YC++N +D+ +
Sbjct: 366 PNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
EM + V TY+TL++ + K ++ + L+++M +R + P+ V+ I+L G
Sbjct: 426 FREMSLRGVIANTV-TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLC 484
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
G+ ++ ++ +E + + D+ II N ++D + G++ +
Sbjct: 485 DNGELEKALEIFGK-IEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDA 543
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
R +NI+I +K K + M + TYN +I A DA ++
Sbjct: 544 RAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEE 603
Query: 370 MRAEGMKADSKTFCCLINGFANAGL---FHKVISTVQLAEK 407
M++ G AD T +IN ++ L F ++ST + + K
Sbjct: 604 MKSSGFPADVSTVKMVINMLSSGELDKSFLDMLSTTRASLK 644
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 144/349 (41%), Gaps = 7/349 (2%)
Query: 115 ALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
A+++F DM++ P + +L + K+ Q L M +G S T + +
Sbjct: 72 AVDLFRDMIQSRPL--PTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIM 129
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAAR 232
+ +CR L AFS + ++ +PD ++TL+ C++ + +EL+ + M
Sbjct: 130 INCFCRCRKLSYAFSTMGKIMKLGY-EPDTVIFNTLLNGLCLECRVSEALELV-DRMVEM 187
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
P +T N +++G GK ++ M+E T +P+ T +++V GQ +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVE-TGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+ K I+ + ++I+I K D + M F TYN +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
F + G + M + + TF LI+ F G + ++ + IA
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
NT YN+++ K L E ++ M C PD T+ I+I Y K
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK 415
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 140/323 (43%), Gaps = 24/323 (7%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A LF MI+ P+ + L +A ++ + ++ +M++ + ++T S +I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHS-IYTLSIMI 130
Query: 211 KPCVDAFKFD--------LVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
K +++L YE P+TV N +L+G + + +++
Sbjct: 131 NCFCRCRKLSYAFSTMGKIMKLGYE--------PDTVIFNTLLNGLCLECRVSEALELVD 182
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK 322
M+E KP + T+NT+++ G++ ++ G +P T+ ++ K
Sbjct: 183 RMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 323 RMYDKMSTVMEYMRKLQ---FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
+ + ME +RK++ Y+ +I+ G N F++M +G KAD
Sbjct: 242 ---GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
T+ LI GF NAG + ++ K +I+ N ++ ++ + K L E +++ K
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358
Query: 440 MKDNQCPPDDTTYTIMIEAYRKE 462
M P+ TY +I+ + KE
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKE 381
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/239 (18%), Positives = 92/239 (38%), Gaps = 1/239 (0%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L+ DM +P + N + S K ++ ++ L +ES ++T++ +I+ F
Sbjct: 75 LFRDMIQSRPLPTVIDFNRLFSAIAKTKQY-ELVLALCKQMESKGIAHSIYTLSIMINCF 133
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
++ K G EP+T FN L+ + + +++ M ++ T
Sbjct: 134 CRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTL 193
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
T N ++ G + D+M G + + T+ ++N +G + ++
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E+ I + Y+ ++ K L +F M+ D TY +I + G
Sbjct: 254 MEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/392 (24%), Positives = 175/392 (44%), Gaps = 11/392 (2%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
L E +K ++ +VF ++ P + ++ L +SG +A F ++ E G
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P YT L+ YCR ++ A ++ NEM C DV TY+T++
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEA 464
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ L+ +M R++ P++ T I++ G+ K G ++ M E + DV T NT++
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEK-RIRLDVVTYNTLLD 523
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
FG +G ID ++ + + I P +++IL+ A K + V + M
Sbjct: 524 GFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKP 583
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
T N++I+ + G+A + E ++M +EG D ++ LI GF K V
Sbjct: 584 TVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLV 643
Query: 403 QLAEKFE--IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR 460
+ E+ + + + YN++L + + E E V ++M + PD +TYT MI +
Sbjct: 644 KKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFV 703
Query: 461 KEGMNDKIYYLEQEKKTMITDGIKVSQPEDEF 492
+ + + + E M+ G P+D+F
Sbjct: 704 SQDNLTEAFRIHDE---MLQRGF---SPDDKF 729
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 143/325 (44%), Gaps = 8/325 (2%)
Query: 142 LGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP 201
L K G+ + + + E+G P TY L++AY L++EAF ++N M P
Sbjct: 245 LCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGF-SP 303
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
V+TY+T+I K++ + ++ +M + P++ T +L K G + EKV
Sbjct: 304 GVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVF 363
Query: 262 SSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK 321
S M S PD+ ++++S+F G +D ++ + G+ P+ + ILI Y +
Sbjct: 364 SDM-RSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCR 422
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD---VGDAKNMEYTFDQMRAEGMKAD 378
K M + M + TYN ++ +G+A + F++M + D
Sbjct: 423 KGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKL---FNEMTERALFPD 479
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
S T LI+G G + Q ++ I + YN +L K D+ + ++
Sbjct: 480 SYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWA 539
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEG 463
M + P +Y+I++ A +G
Sbjct: 540 DMVSKEILPTPISYSILVNALCSKG 564
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 163/381 (42%), Gaps = 25/381 (6%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+ + + F P TY +I L K G+ RA+++F M+ G P TY +L
Sbjct: 288 EAFELMNAMPGKGF-SPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L C+ + E + ++M++ + PD+ +S+++ + D + + +
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVV-PDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
++P+ V I++ GY + G + + ML+ C DV T NTI+ +
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQ-GCAMDVVTYNTILHGLCKRKMLGEA 464
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+K + + + P++ T ILI + K + + M++ + TYN +++
Sbjct: 465 DKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG 524
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE---- 409
F VGD + + M ++ + ++ L+N + G LAE F
Sbjct: 525 FGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKG---------HLAEAFRVWDE 575
Query: 410 -IAEN----TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
I++N N+++ ++ + + E ++M PD +Y +I + +E
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREEN 635
Query: 465 NDKIYYL----EQEKKTMITD 481
K + L E+E+ ++ D
Sbjct: 636 MSKAFGLVKKMEEEQGGLVPD 656
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/339 (21%), Positives = 132/339 (38%), Gaps = 43/339 (12%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
C + + L+ Y ++ L EA +++ + + LI V +L
Sbjct: 161 CGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGF-TVSIDACNALIGSLVRIGWVELA 219
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+Y++++ + N T NI+++ K GK +++ LS + E PD+ T NT+IS
Sbjct: 220 WGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEK-GVYPDIVTYNTLIS 278
Query: 283 VFGNMGQIDMMEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
+ + G +ME+ +E G P T+N +I K Y++ V M +
Sbjct: 279 AYSSKG---LMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 340 FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE-------------------------- 373
++TY +++ GD E F MR+
Sbjct: 336 LSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKAL 395
Query: 374 ---------GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
G+ D+ + LI G+ G+ ++ + A + YN +L
Sbjct: 396 MYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
K + L E +++F M + PD T TI+I+ + K G
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLG 494
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 90/192 (46%)
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
+V+T+N +++ G+++ + + + + G+ P+ T+N LI AY K + ++ +M
Sbjct: 234 NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELM 293
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
M F TYN VI G + + F +M G+ DS T+ L+
Sbjct: 294 NAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKK 353
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + ++ + +++++S T++ +L + F +K+ PD+ Y
Sbjct: 354 GDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIY 413
Query: 453 TIMIEAYRKEGM 464
TI+I+ Y ++GM
Sbjct: 414 TILIQGYCRKGM 425
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 164/364 (45%), Gaps = 4/364 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ + D + E Y+P T+ L+ L + + A L M+ +GC P TY A+
Sbjct: 163 EAVALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ C+ D A ++LN+M+ + + DV Y+T+I D L+ M +
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKI-EADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG 280
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
I P+ T N ++S G++ ++LS MLE + PD+ N +I F G++
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NINPDLVFFNALIDAFVKEGKLVEA 339
Query: 294 EKWY-EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
EK Y E ++ P+ +N LI + K + ++ V M + T TY +I
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
F D N + F QM ++G+ D T+ L++G N G + + +K ++
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLE 472
+ Y ++ A KA + + +F + P+ TYT M+ + ++G+ ++ L
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALF 519
Query: 473 QEKK 476
E K
Sbjct: 520 VEMK 523
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 146/335 (43%), Gaps = 1/335 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY +I L K G+P A L M + + Y ++ C+ +D+AF
Sbjct: 212 QPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFD 271
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ N+M+ + +PDVFTY+ LI + ++ L DM ++I P+ V N ++ +
Sbjct: 272 LFNKMETKGI-KPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAF 330
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK + EK+ M++S C PDV NT+I F +++ + + + G+
Sbjct: 331 VKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGN 390
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T T+ LI + + R D V + M TYN +++ + G+ + F+
Sbjct: 391 TVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFE 450
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M+ MK D T+ +I AG + N Y ++S +
Sbjct: 451 YMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKG 510
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E + +F MK++ P+ TY +I A ++G
Sbjct: 511 LKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 145/349 (41%), Gaps = 11/349 (3%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A LF M++ PS ++ LL+A + N D S+ +M+N + +++TYS I
Sbjct: 59 AIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-NLYTYSIFI 117
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ L + M P+ VT N +L+G+ + + ++ M+E
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVE-MGY 176
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
+PD T T++ + E+ G +P+ T+ +I K+ D
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 236
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
++ M K + YN +I+ + F++M +G+K D T+ LI+
Sbjct: 237 LLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLC 296
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM-KDNQCPPDD 449
N G + + + I + F+NA++ A K L+E E+++ M K C PD
Sbjct: 297 NYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDV 356
Query: 450 TTYTIMIEAYRK-----EGMNDKIYYLEQEKKTMITDGIKVSQPEDEFF 493
Y +I+ + K EGM + E ++ ++ + + + FF
Sbjct: 357 VAYNTLIKGFCKYKRVEEGME---VFREMSQRGLVGNTVTYTTLIHGFF 402
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 40/326 (12%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ + L + K A ++F+ ++ +P TY LI L G+ A +L +
Sbjct: 254 NTIIDGLCKY---KHMDDAFDLFNKMETKGI-KPDVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
M+E+ +P + AL+ A+ + L EA + +EM C PDV Y+TLIK
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
+ + ++ +M+ R ++ NTVT ++ G+ +A D + V M+ S PD+ T
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV-SDGVHPDIMT 428
Query: 277 MNTIISVFGNMGQI-------------DM-------------------MEKWYEKFRNF- 303
N ++ N G + DM +E ++ F +
Sbjct: 429 YNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLS 488
Query: 304 --GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
G++P T+ ++ + +K + ++ + M++ + TYN +I A GD
Sbjct: 489 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEA 548
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLIN 387
+MR+ G D+ TF + N
Sbjct: 549 ASAELIKEMRSCGFAGDASTFGLVTN 574
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/255 (20%), Positives = 100/255 (39%), Gaps = 1/255 (0%)
Query: 209 LIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLEST 268
L + + K D L+ DM P+ V + +LS K KFD + L +++
Sbjct: 46 LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVIS-LGEQMQNL 104
Query: 269 SCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKM 328
+++T + I+ F Q+ + K G P T N L+ + +
Sbjct: 105 GISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 164
Query: 329 STVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING 388
+++ M ++ + T T+ ++ A ++M +G + D T+ +ING
Sbjct: 165 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 224
Query: 389 FANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPD 448
G ++ + EK +I + YN ++ K + + + +F +M+ PD
Sbjct: 225 LCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 284
Query: 449 DTTYTIMIEAYRKEG 463
TY +I G
Sbjct: 285 VFTYNPLISCLCNYG 299
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 122 bits (306), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 161/355 (45%), Gaps = 8/355 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL+V + L + +P TY LI G A +L M+ G P TY ++
Sbjct: 212 ALKVLNQLLSDN-CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTII 270
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ ++D AF ++ ++ C+PDV +Y+ L++ ++ K++ E L M +
Sbjct: 271 RGMCKEGMVDRAFEMVRNLELKG-CEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN VT +I+++ + GK ++ +L M E PD ++ + +I+ F G++D+
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEK-GLTPDAYSYDPLIAAFCREGRLDVAI 388
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
++ E + G P+ +N ++ K D+ + + ++ +S+YN + A
Sbjct: 389 EFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSAL 448
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
GD + +M + G+ D T+ +I+ G+ + + E +
Sbjct: 449 WSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSV 508
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE-----AYRKEGM 464
YN VL KA + + V + M N C P++TTYT++IE YR E M
Sbjct: 509 VTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 159/358 (44%), Gaps = 4/358 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ V ++L++ F +P Y LI K + A ++ M + P TY +
Sbjct: 142 KAVRVMEILEK--FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIM 199
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ + C LD A +LN++ + CQP V TY+ LI+ + D L ++M +R
Sbjct: 200 IGSLCSRGKLDLALKVLNQLLSDN-CQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ P+ T N ++ G K G D+ +++ + LE C+PDV + N ++ N G+ +
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRN-LELKGCEPDVISYNILLRALLNQGKWEEG 317
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
EK K + +P T++ILI + ++ +++ M++ +Y+ +I A
Sbjct: 318 EKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
F G + M ++G D + ++ G + + + + N
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
++ YN + SA + D + + M N PD+ TY MI +EGM D+ + L
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFEL 495
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 144/327 (44%), Gaps = 9/327 (2%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+SG + L TM+ +G +P T L+ + + +A ++ ++ QPDV
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG--QPDV 158
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
F Y+ LI + D + + M ++ P+TVT NI++ GK D KVL+
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
+L S +C+P V T +I G +D K ++ + G++P+ T+N +I K+
Sbjct: 219 LL-SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEG 277
Query: 324 MYDKMSTVMEYMRKLQFPWT---TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
M D+ E +R L+ +YN ++ A + G + E +M +E +
Sbjct: 278 MVDR---AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVV 334
Query: 381 TFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
T+ LI G + ++ ++L ++ + + Y+ +++A + L + M
Sbjct: 335 TYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM 394
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+ C PD Y ++ K G D+
Sbjct: 395 ISDGCLPDIVNYNTVLATLCKNGKADQ 421
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 2/348 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY ++ L K G A L M + +P Y ++ A C +++A +
Sbjct: 218 QPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM N + +P+V TY++LI+ + ++ L DM R I PN VT + ++ +
Sbjct: 278 LFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 336
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK + EK+ M++ S PD++T +++I+ F ++D + +E + P
Sbjct: 337 VKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+N LI + K + D+ + M + T TY +I F + N + F
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFK 455
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
QM ++G+ D T+ L++G N G + + ++ ++ + YN ++ KA
Sbjct: 456 QMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAG 515
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+ + +F + P+ TYT M+ + ++G+ ++ L +E K
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMK 563
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 146/340 (42%), Gaps = 2/340 (0%)
Query: 124 EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
E EP Y +I L + A LFT M +G P+ TY +L+ C
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
+A +L++M + P+V T+S LI V K E LY++M RSI P+ T +
Sbjct: 308 SDASRLLSDMIERKI-NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
+++G+ + D+ + + M+ S C P+V T NT+I F ++D + + +
Sbjct: 367 LINGFCMHDRLDEAKHMFELMI-SKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G+ T T+ LI + + R D V + M TY+ +++ + G +
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
F+ ++ M+ D T+ +I G AG + N Y ++S
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ E + +F+ MK+ PD TY +I A+ ++G
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDG 585
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/415 (23%), Positives = 162/415 (39%), Gaps = 45/415 (10%)
Query: 106 RIEKKQWLQALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
R+ + A+ +F DM+K F P + KL+ + K + L M G
Sbjct: 56 RLNDLKLDDAVNLFGDMVKSRPF--PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 113
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLC----------- 199
+ TY+ L+ +CR + L A ++L +M + C
Sbjct: 114 HNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSL 173
Query: 200 ---------QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGK 250
QPD FT++TLI + L + M + P+ VT IV++G K
Sbjct: 174 VGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
G D +L M E +P V NTII N ++ + + N GI P
Sbjct: 234 RGDIDLALSLLKKM-EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
T+N LI + S ++ M + + T++ +I+AF G E +D+M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
+ D T+ LINGF + +L + N YN ++ KA+ +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRV 412
Query: 431 MEMERVFKRMKDNQCPPDDTTYTIMIEAY--RKEGMNDKIYYLEQEKKTMITDGI 483
E +F+ M + TYT +I + +E N +I + K M++DG+
Sbjct: 413 DEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF-----KQMVSDGV 462
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 139/297 (46%), Gaps = 6/297 (2%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
+++ + ++A +++D + + S +P TY LI + A+ +F MI + C P+
Sbjct: 337 VKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 395
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
TY L+ +C++ +DE + EM L V TY+TLI A + D ++++
Sbjct: 396 VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV-TYTTLIHGFFQARECDNAQIVF 454
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ M + ++P+ +T +I+L G GK + V+ L+ + +PD++T N +I
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKV-ETALVVFEYLQRSKMEPDIYTYNIMIEGMCK 513
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
G+++ + G++P T+ ++ + +K + ++ + M++ + T
Sbjct: 514 AGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGT 573
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL---FHKVIS 400
YN +I A GD +MR+ D+ T + N + L F K++S
Sbjct: 574 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNMLHDGRLDKSFLKMLS 630
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 144/323 (44%), Gaps = 2/323 (0%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+ AL F LK ++ TY ++ LG++ Q +L M+ +GC P+ TY
Sbjct: 338 NYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTY 397
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
L+ +Y R+N L EA ++ N+M+ C+PD TY TLI A D+ +Y+ M
Sbjct: 398 NRLIHSYGRANYLKEAMNVFNQMQEAG-CEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ 456
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ P+T T +++++ GKAG ++ M+ C P++ T N +I++
Sbjct: 457 EAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMV-GQGCTPNLVTFNIMIALHAKARNY 515
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ K Y +N G +P+ T++I++ G ++ V M++ + Y +
Sbjct: 516 ETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLL 575
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
++ + G+ + M G++ + T L++ F + + +Q +
Sbjct: 576 VDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGL 635
Query: 411 AENTTFYNAVLSACTKAEDLMEM 433
+ Y +LS CT A +M
Sbjct: 636 HPSLQTYTLLLSCCTDARSNFDM 658
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 5/283 (1%)
Query: 97 NTVTED-LSERIEKKQWL-QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
NTVT + L + +L +A+ VF+ ++E + EP TY LI + K+G A +
Sbjct: 393 NTVTYNRLIHSYGRANYLKEAMNVFNQMQE-AGCEPDRVTYCTLIDIHAKAGFLDIAMDM 451
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
+ M E G P TY+ ++ ++ L A + EM C P++ T++ +I
Sbjct: 452 YQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQG-CTPNLVTFNIMIALHA 510
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A ++ LY DM P+ VT +IV+ G G ++ E V + M + + PD
Sbjct: 511 KARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEM-QRKNWVPDE 569
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
++ ++G G +D +WY+ G+ P T N L+ + + + +++
Sbjct: 570 PVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQS 629
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
M L + TY ++ TD +M + M G A
Sbjct: 630 MLALGLHPSLQTYTLLLSCCTDARSNFDMGFCGQLMAVSGHPA 672
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/289 (23%), Positives = 117/289 (40%), Gaps = 2/289 (0%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TYT ++ R+ E +L+EM C+P+ TY+ LI A ++
Sbjct: 360 HTYTTMVGNLGRAKQFGEINKLLDEMVRDG-CKPNTVTYNRLIHSYGRANYLKEAMNVFN 418
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M P+ VT ++ + KAG D + M E+ PD +T + II+ G
Sbjct: 419 QMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA-GLSPDTFTYSVIINCLGKA 477
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G + + + + G P TFNI+I + K R Y+ + M+ F TY
Sbjct: 478 GHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTY 537
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ V+E G + E F +M+ + D + L++ + AG K Q +
Sbjct: 538 SIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQ 597
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ N N++LS + + E + + M P TYT+++
Sbjct: 598 AGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLL 646
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 103/249 (41%), Gaps = 4/249 (1%)
Query: 240 TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK 299
T ++ G+A +F ++ K+L M+ CKP+ T N +I +G + + +
Sbjct: 361 TYTTMVGNLGRAKQFGEINKLLDEMVRD-GCKPNTVTYNRLIHSYGRANYLKEAMNVFNQ 419
Query: 300 FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
+ G EP+ T+ LI + K D + + M++ T TY+ +I G
Sbjct: 420 MQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGH 479
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
F +M +G + TF +I A A + + + + + Y+
Sbjct: 480 LPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSI 539
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMI 479
V+ L E E VF M+ PD+ Y ++++ + K G DK + Q + M+
Sbjct: 540 VMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAW---QWYQAML 596
Query: 480 TDGIKVSQP 488
G++ + P
Sbjct: 597 QAGLRPNVP 605
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
D + N ++ N W + R G + + T+ ++G G+ + + +++ ++
Sbjct: 325 DAYQANQVLKQMDNYANALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQFGEINKLL 382
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ M + T TYN +I ++ K F+QM+ G + D T+C LI+ A A
Sbjct: 383 DEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKA 442
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + Q ++ ++ +T Y+ +++ KA L R+F M C P+ T+
Sbjct: 443 GFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTF 502
Query: 453 TIMIEAYRK 461
IMI + K
Sbjct: 503 NIMIALHAK 511
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
E + F N V++ + +A Y R G K D T+ ++ A
Sbjct: 315 EALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRA 372
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
F ++ + + NT YN ++ + +A L E VF +M++ C PD TY
Sbjct: 373 KQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTY 432
Query: 453 TIMIEAYRKEGMND 466
+I+ + K G D
Sbjct: 433 CTLIDIHAKAGFLD 446
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 2/319 (0%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL F LK ++ TY ++ LG++ Q +L M+ +GC P+ TY L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+Y R+N L+EA ++ N+M+ C+PD TY TLI A D+ +Y+ M A +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+T T +++++ GKAG K+ M++ C P++ T N ++ +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
K Y +N G EP+ T++I++ G ++ V M++ + Y +++ +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G+ + + M G++ + T L++ F + +Q + +
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 415 TFYNAVLSACTKAEDLMEM 433
Y +LS CT ++M
Sbjct: 645 QTYTLLLSCCTDGRSKLDM 663
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 97 NTVTED-LSERIEKKQWL-QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
NTVT + L + +L +A+ VF+ ++E + +P TY LI + K+G A +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
+ M G P TY+ ++ ++ L A + EM + C P++ TY+ ++
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLHA 515
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A + LY DM P+ VT +IV+ G G ++ E V + M + + PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDE 574
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
++ ++G G ++ +WY+ + G+ P T N L+ + + + +++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
M L + TY ++ TD +M + M + G A
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPA 677
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 2/289 (0%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TYT ++ R+ +L+EM CQP+ TY+ LI A + ++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDG-CQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M P+ VT ++ + KAG D + M ++ PD +T + II+ G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKA 482
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G + K + + + G P T+NI++ + K R Y + M+ F TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ V+E G + E F +M+ + D + L++ + AG K Q
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ N N++LS + + E + + M P TYT+++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
L++ + D + N ++ + G W + R G + + T+ ++G G+ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
+ ++ +++ M + T TYN +I ++ F+QM+ G K D T+C
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
LI+ A AG + Q + ++ +T Y+ +++ KA L ++F M D
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 445 CPPDDTTYTIMIEAYRK 461
C P+ TY IM++ + K
Sbjct: 500 CTPNLVTYNIMMDLHAK 516
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
K D T T++ G Q + K ++ G +P T T+N LI +YG+ ++
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
V M++ TY +I+ G + +M+A G+ D+ T+ +IN
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 391 NAGLF---HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
AG HK+ ++ ++ N YN ++ KA + ++++ M++ P
Sbjct: 481 KAGHLPAAHKLF--CEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 448 DDTTYTIMIEAYRKEGMND--KIYYLEQEKKTMITD 481
D TY+I++E G + + + E ++K I D
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
E ++ L N V++ D G+A Y R G K D T+ ++ A
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRA 377
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
F + + + NT YN ++ + +A L E VF +M++ C PD TY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 453 TIMIEAYRKEGMND 466
+I+ + K G D
Sbjct: 438 CTLIDIHAKAGFLD 451
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 2/319 (0%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL F LK ++ TY ++ LG++ Q +L M+ +GC P+ TY L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+Y R+N L+EA ++ N+M+ C+PD TY TLI A D+ +Y+ M A +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+T T +++++ GKAG K+ M++ C P++ T N ++ +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
K Y +N G EP+ T++I++ G ++ V M++ + Y +++ +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G+ + + M G++ + T L++ F + +Q + +
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 415 TFYNAVLSACTKAEDLMEM 433
Y +LS CT ++M
Sbjct: 645 QTYTLLLSCCTDGRSKLDM 663
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 97 NTVTED-LSERIEKKQWL-QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
NTVT + L + +L +A+ VF+ ++E + +P TY LI + K+G A +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
+ M G P TY+ ++ ++ L A + EM + C P++ TY+ ++
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLHA 515
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A + LY DM P+ VT +IV+ G G ++ E V + M + + PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDE 574
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
++ ++G G ++ +WY+ + G+ P T N L+ + + + +++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
M L + TY ++ TD +M + M + G A
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPA 677
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 2/289 (0%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TYT ++ R+ +L+EM CQP+ TY+ LI A + ++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDG-CQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M P+ VT ++ + KAG D + M ++ PD +T + II+ G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKA 482
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G + K + + + G P T+NI++ + K R Y + M+ F TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ V+E G + E F +M+ + D + L++ + AG K Q
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ N N++LS + + E + + M P TYT+++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
L++ + D + N ++ + G W + R G + + T+ ++G G+ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
+ ++ +++ M + T TYN +I ++ F+QM+ G K D T+C
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
LI+ A AG + Q + ++ +T Y+ +++ KA L ++F M D
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 445 CPPDDTTYTIMIEAYRK 461
C P+ TY IM++ + K
Sbjct: 500 CTPNLVTYNIMMDLHAK 516
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
K D T T++ G Q + K ++ G +P T T+N LI +YG+ ++
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
V M++ TY +I+ G + +M+A G+ D+ T+ +IN
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 391 NAGLF---HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
AG HK+ ++ ++ N YN ++ KA + ++++ M++ P
Sbjct: 481 KAGHLPAAHKLF--CEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 448 DDTTYTIMIEAYRKEGMND--KIYYLEQEKKTMITD 481
D TY+I++E G + + + E ++K I D
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
E ++ L N V++ D G+A Y R G K D T+ ++ A
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRA 377
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
F + + + NT YN ++ + +A L E VF +M++ C PD TY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 453 TIMIEAYRKEGMND 466
+I+ + K G D
Sbjct: 438 CTLIDIHAKAGFLD 451
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 144/319 (45%), Gaps = 2/319 (0%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL F LK ++ TY ++ LG++ Q +L M+ +GC P+ TY L+
Sbjct: 347 ALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLI 406
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+Y R+N L+EA ++ N+M+ C+PD TY TLI A D+ +Y+ M A +
Sbjct: 407 HSYGRANYLNEAMNVFNQMQEAG-CKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGL 465
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+T T +++++ GKAG K+ M++ C P++ T N ++ +
Sbjct: 466 SPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNAL 524
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
K Y +N G EP+ T++I++ G ++ V M++ + Y +++ +
Sbjct: 525 KLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLW 584
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G+ + + M G++ + T L++ F + +Q + +
Sbjct: 585 GKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSL 644
Query: 415 TFYNAVLSACTKAEDLMEM 433
Y +LS CT ++M
Sbjct: 645 QTYTLLLSCCTDGRSKLDM 663
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 125/283 (44%), Gaps = 5/283 (1%)
Query: 97 NTVTED-LSERIEKKQWL-QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
NTVT + L + +L +A+ VF+ ++E + +P TY LI + K+G A +
Sbjct: 398 NTVTYNRLIHSYGRANYLNEAMNVFNQMQE-AGCKPDRVTYCTLIDIHAKAGFLDIAMDM 456
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
+ M G P TY+ ++ ++ L A + EM + C P++ TY+ ++
Sbjct: 457 YQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG-CTPNLVTYNIMMDLHA 515
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A + LY DM P+ VT +IV+ G G ++ E V + M + + PD
Sbjct: 516 KARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEM-QQKNWIPDE 574
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
++ ++G G ++ +WY+ + G+ P T N L+ + + + +++
Sbjct: 575 PVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQN 634
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
M L + TY ++ TD +M + M + G A
Sbjct: 635 MLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPA 677
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 116/289 (40%), Gaps = 2/289 (0%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TYT ++ R+ +L+EM CQP+ TY+ LI A + ++
Sbjct: 365 HTYTTMVGNLGRAKQFGAINKLLDEMVRDG-CQPNTVTYNRLIHSYGRANYLNEAMNVFN 423
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M P+ VT ++ + KAG D + M ++ PD +T + II+ G
Sbjct: 424 QMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRM-QAGGLSPDTFTYSVIINCLGKA 482
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G + K + + + G P T+NI++ + K R Y + M+ F TY
Sbjct: 483 GHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDKVTY 542
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ V+E G + E F +M+ + D + L++ + AG K Q
Sbjct: 543 SIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWYQAMLH 602
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ N N++LS + + E + + M P TYT+++
Sbjct: 603 AGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLL 651
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 89/197 (45%), Gaps = 2/197 (1%)
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
L++ + D + N ++ + G W + R G + + T+ ++G G+ +
Sbjct: 322 LQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRAKQ 379
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
+ ++ +++ M + T TYN +I ++ F+QM+ G K D T+C
Sbjct: 380 FGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCT 439
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
LI+ A AG + Q + ++ +T Y+ +++ KA L ++F M D
Sbjct: 440 LIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQG 499
Query: 445 CPPDDTTYTIMIEAYRK 461
C P+ TY IM++ + K
Sbjct: 500 CTPNLVTYNIMMDLHAK 516
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 94/216 (43%), Gaps = 8/216 (3%)
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
K D T T++ G Q + K ++ G +P T T+N LI +YG+ ++
Sbjct: 361 KHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMN 420
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
V M++ TY +I+ G + +M+A G+ D+ T+ +IN
Sbjct: 421 VFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCLG 480
Query: 391 NAGLF---HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
AG HK+ ++ ++ N YN ++ KA + ++++ M++ P
Sbjct: 481 KAGHLPAAHKLF--CEMVDQ-GCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 448 DDTTYTIMIEAYRKEGMND--KIYYLEQEKKTMITD 481
D TY+I++E G + + + E ++K I D
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPD 573
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 2/134 (1%)
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
E ++ L N V++ D G+A Y R G K D T+ ++ A
Sbjct: 320 EALQNLGLRIDAYQANQVLKQMNDYGNALGFFYWLK--RQPGFKHDGHTYTTMVGNLGRA 377
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
F + + + NT YN ++ + +A L E VF +M++ C PD TY
Sbjct: 378 KQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTY 437
Query: 453 TIMIEAYRKEGMND 466
+I+ + K G D
Sbjct: 438 CTLIDIHAKAGFLD 451
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 155/349 (44%), Gaps = 9/349 (2%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+EP TY L+ L K+ + A++L M +GC P +YT ++++ C L+ E
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ +P V Y+ LI + L +M + I PN ++ + +++
Sbjct: 237 ELAERF------EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINV 290
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII-SVFGNMGQIDMMEKWYEKFRNFGIE 306
+G+ + L+ ML+ C P+++T+++++ F D ++ W + R FG++
Sbjct: 291 LCNSGQIELAFSFLTQMLKR-GCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQ 349
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P +N L+ + K +V +M ++ TY ++I F G Y
Sbjct: 350 PNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYI 409
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
+++M G + + ++ F + S +++ K A + +NA +
Sbjct: 410 WNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCD 469
Query: 427 AEDLMEMERVFKRM-KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
A L E+VF++M + ++CPP+ TY +++ K ++ Y L +E
Sbjct: 470 AGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTRE 518
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 154/343 (44%), Gaps = 6/343 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+EP Y LI L K A +L M+E+G P+ +Y+ L+ C S ++ AF
Sbjct: 242 FEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAF 301
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPC-VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLS 246
S L +M C P+++T S+L+K C + FD ++L + + + PN V N ++
Sbjct: 302 SFLTQMLKRG-CHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQ 360
Query: 247 GYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
G+ G + V S M E C P++ T ++I+ F G +D + K G
Sbjct: 361 GFCSHGNIVKAVSVFSHM-EEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCC 419
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P + ++ A + + + +++E M K + T+N I+ D G E
Sbjct: 420 PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKV 479
Query: 367 FDQMRAEG-MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL-SAC 424
F QM + + T+ L++G A A + + + +++ YN +L +C
Sbjct: 480 FRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSC 539
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+ ++ V K M D + PD+ T ++I AY K+G ++
Sbjct: 540 NAGLPGIALQLVGKMMVDGK-SPDEITMNMIILAYCKQGKAER 581
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/383 (22%), Positives = 157/383 (40%), Gaps = 12/383 (3%)
Query: 102 DLSERIEKKQWL-QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIE 160
D+ +R+ ++ + AL F + + ++ T+ +I L GQ + L M
Sbjct: 45 DVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKL 104
Query: 161 EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD 220
+G S + + ++++ Y + L + A + +K C P V Y+ ++ + +
Sbjct: 105 QGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG-CDPSVKIYNHVLDTLLGENRIQ 163
Query: 221 LVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 280
++ ++Y DM PN T N++L K K D +K+L M + C PD + T+
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEM-SNKGCCPDAVSYTTV 222
Query: 281 ISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF 340
IS +G + + E+F EP +N LI K+ Y +M M +
Sbjct: 223 ISSMCEVGLVKEGRELAERF-----EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING-FANAGLFHKVI 399
+Y+ +I + G + QM G + T L+ G F F +
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD 337
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
Q+ F + N YN ++ ++++ VF M++ C P+ TY +I +
Sbjct: 338 LWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGF 397
Query: 460 RKEGMNDKIYYLEQEKKTMITDG 482
K G D Y+ + M+T G
Sbjct: 398 AKRGSLDGAVYIWNK---MLTSG 417
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 125/312 (40%), Gaps = 38/312 (12%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL++++ + +P Y L+ G +A +F+ M E GC P+ TY +L+
Sbjct: 335 ALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLI 394
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+ + LD A I N+M C P+V Y+ +++ KF E L E M+ +
Sbjct: 395 NGFAKRGSLDGAVYIWNKMLTSGCC-PNVVVYTNMVEALCRHSKFKEAESLIEIMSKENC 453
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV-------------------- 274
P+ T N + G AG+ D EKV M + C P++
Sbjct: 454 APSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAY 513
Query: 275 ------------W---TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
W T NT++ N G + + K G P+ T N++I AY
Sbjct: 514 GLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAY 573
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWT--TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
K+ ++ + +++ + + W +Y NVI ++ ++M + G+
Sbjct: 574 CKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVP 633
Query: 378 DSKTFCCLINGF 389
T+ LIN F
Sbjct: 634 SIATWSVLINCF 645
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 154/372 (41%), Gaps = 39/372 (10%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T+ LI L G+ A L M+E GC P TY +++ CRS A
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+L +M+ + + DVFTYST+I D L+++M + I + VT N ++ G
Sbjct: 214 DLLRKMEERNV-KADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRG 272
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
KAGK++ +L M+ S P+V T N ++ VF G++ + Y++ GI P
Sbjct: 273 LCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISP 331
Query: 308 ETRTFNILIGAYGK------------------------------------KRMYDKMSTV 331
T+N L+ Y KR+ D M V
Sbjct: 332 NIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK-V 390
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
+ K TY+ +++ F G K E F +M + G+ D T+ L++G +
Sbjct: 391 FRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD 450
Query: 392 AGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
G K + + +K ++ Y ++ K + + +F + P+ T
Sbjct: 451 NGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 452 YTIMIEAYRKEG 463
YT+MI K+G
Sbjct: 511 YTVMISGLCKKG 522
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 86/413 (20%), Positives = 167/413 (40%), Gaps = 71/413 (17%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ + D + E+ +P TY ++ + +SG A L M E TY+ +
Sbjct: 176 EAVVLVDRMVENG-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTI 234
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ + CR +D A S+ EM+ + + V TY++L++ A K++ LL +DM +R
Sbjct: 235 IDSLCRDGCIDAAISLFKEMETKGI-KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSRE 293
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQ----------------------------MEKVLS--- 262
I+PN +T N++L + K GK + M+ LS
Sbjct: 294 IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEAN 353
Query: 263 ---SMLESTSCKPDVWTMNTIIS-------------VFGNM------------------- 287
++ C PD+ T ++I VF N+
Sbjct: 354 NMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGF 413
Query: 288 ---GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
G+I + E+ +++ + G+ P+ T+ IL+ +K + E ++K +
Sbjct: 414 CQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGI 473
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
Y +IE G ++ F + +G+K + T+ +I+G G + ++
Sbjct: 474 VMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRK 533
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
E+ A N YN ++ A + DL ++ + MK D ++ ++I+
Sbjct: 534 MEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVID 586
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 135/316 (42%), Gaps = 45/316 (14%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL + DM+ P T+ L+ + K G+ A +L+ MI G P+ TY L+
Sbjct: 283 ALLLKDMVSREIV--PNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 340
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
YC N L EA ++L+ M + C PD+ T+++LIK + D ++ +++ R +
Sbjct: 341 DGYCMQNRLSEANNMLDLMVRNK-CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGL 399
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+ N VT +I++ G+ ++GK E++ M+ S PDV T ++ + G+ +E
Sbjct: 400 VANAVTYSILVQGFCQSGKIKLAEELFQEMV-SHGVLPDVMTYGILLDGLCDNGK---LE 455
Query: 295 KWYEKFRNF--------------------------------------GIEPETRTFNILI 316
K E F + G++P T+ ++I
Sbjct: 456 KALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMI 515
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
KK + + ++ M + TYN +I A GD ++M++ G
Sbjct: 516 SGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFS 575
Query: 377 ADSKTFCCLINGFANA 392
AD+ + +I+ +A
Sbjct: 576 ADASSIKMVIDMLLSA 591
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 111/270 (41%), Gaps = 5/270 (1%)
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
VD K D + L E + +R +P+ V + S + +F+ + LE +
Sbjct: 65 VDIKKDDAIALFQEMIRSRP-LPSLVDFSRFFSAIARTKQFNLVLD-FCKQLELNGIAHN 122
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
++T+N +I+ F + K G EP+T TFN LI + + +++
Sbjct: 123 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVD 182
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
M + TYN+++ GD +M +KAD T+ +I+ G
Sbjct: 183 RMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDG 242
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
IS + E I + YN+++ KA + + K M + P+ T+
Sbjct: 243 CIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFN 302
Query: 454 IMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
++++ + KEG K+ + K MIT GI
Sbjct: 303 VLLDVFVKEG---KLQEANELYKEMITRGI 329
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 90/336 (26%), Positives = 149/336 (44%), Gaps = 2/336 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T+ L+ + A L M++ G +P+ Y L+ C++ L+ A
Sbjct: 137 YEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIAL 196
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+LNEM+ L DV TY+TL+ + ++ + DM RSI P+ VT ++
Sbjct: 197 ELLNEMEKKGL-GADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K G D+ +++ M++S S P+ T N+II+ G++ +K ++ + G P
Sbjct: 256 FVKQGNLDEAQELYKEMIQS-SVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFP 314
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+N LI + K RM D+ + + M F TYN +I + VG + F
Sbjct: 315 NVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIF 374
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
M + + D T C L++G G + + E YN ++ KA
Sbjct: 375 CWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKA 434
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ + + +F R+ PD TYTIMI K G
Sbjct: 435 DKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNG 470
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 104/224 (46%), Gaps = 9/224 (4%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T T + +++ +A E++ + + S +P TY +I L G+ + A++ F
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSV-DPNNVTYNSIINGLCMHGRLYDAKKTF 304
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M +GC P+ TY L++ +C+ ++DE + M D+FTY+TLI
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGF-NADIFTYNTLIHGYCQ 363
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
K + ++ M +R + P+ +T I+L G G+ + M ES +
Sbjct: 364 VGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEK-YIGIV 422
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNF---GIEPETRTFNILI 316
N +I + + D +EK +E F G++P+ RT+ I+I
Sbjct: 423 AYNIMIH---GLCKADKVEKAWELFCRLPVEGVKPDARTYTIMI 463
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 125/325 (38%), Gaps = 7/325 (2%)
Query: 144 KSGQPHRAR-----QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPL 198
++G H R LF M+ PS +T LL A + +M+ + +
Sbjct: 43 RTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102
Query: 199 CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQME 258
D+++++ LI + + M P+ VT +L G+ +
Sbjct: 103 SH-DLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161
Query: 259 KVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA 318
++ M++S +P+V NT+I G++++ + + G+ + T+N L+
Sbjct: 162 SLVILMVKSGY-EPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
+ + ++ M K T+ +I+ F G+ + + +M + +
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
+ T+ +ING G + T L N YN ++S K + E ++F+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEG 463
RM D TY +I Y + G
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVG 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/296 (18%), Positives = 111/296 (37%), Gaps = 4/296 (1%)
Query: 173 LLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
L + S ++AF++ EM + PL P + ++ L+ + +++ V + M
Sbjct: 42 LRTGFLHSIRFEDAFALFFEMVHSQPL--PSIVDFTRLLTATANLRRYETVIYFSQKMEL 99
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
I + + I++ + + + VL M++ +P + T +++ F + +I
Sbjct: 100 YGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMK-LGYEPSIVTFGSLLHGFCLVNRIG 158
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
G EP +N LI K + ++ M K TYN ++
Sbjct: 159 DAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLL 218
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
G + M + D TF LI+ F G + + + +
Sbjct: 219 TGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVD 278
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
N YN++++ L + ++ F M C P+ TY +I + K M D+
Sbjct: 279 PNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDE 334
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/232 (19%), Positives = 100/232 (43%), Gaps = 7/232 (3%)
Query: 246 SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGI 305
+G+ + +F+ + M+ S P + +++ N+ + + + + +K +GI
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPL-PSIVDFTRLLTATANLRRYETVIYFSQKMELYGI 102
Query: 306 EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF---TDVGDAKN 362
+ +F ILI + + +V+ M KL + + T+ +++ F +GDA +
Sbjct: 103 SHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFS 162
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
+ M G + + + LI+G G + + + EK + + YN +L+
Sbjct: 163 LVIL---MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
+ + R+ + M PD T+T +I+ + K+G D+ L +E
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 2/348 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY ++ L K G A L M + + YT ++ A C +++A +
Sbjct: 217 QPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALN 276
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM N + +P+V TY++LI+ + ++ L DM R I PN VT + ++ +
Sbjct: 277 LFTEMDNKGI-RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 335
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK + EK+ M++ S PD++T +++I+ F ++D + +E + P
Sbjct: 336 VKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPN 394
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+N LI + K + ++ + M + T TYN +I+ GD + F
Sbjct: 395 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 454
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
+M ++G+ D T+ L++G G K + + +K ++ + YN ++ KA
Sbjct: 455 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+ + +F + P+ YT MI + ++G+ ++ L +E K
Sbjct: 515 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMK 562
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 156/328 (47%), Gaps = 2/328 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
P TY LI L G+ A +L + MIE +P+ T++AL+ A+ + L EA
Sbjct: 287 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 346
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ +EM + PD+FTYS+LI + D + ++E M ++ PN VT N ++ G+
Sbjct: 347 LYDEMIKRSI-DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
KA + ++ ++ M + V T NT+I G DM +K ++K + G+ P+
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTV-TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPD 464
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T++IL+ K +K V EY++K + TYN +IE G ++ F
Sbjct: 465 IITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFC 524
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
+ +G+K + + +I+GF GL + + + ++ N+ YN ++ A +
Sbjct: 525 SLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDG 584
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMI 456
D + K M+ D +T +++I
Sbjct: 585 DKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 149/381 (39%), Gaps = 76/381 (19%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
+Y L+ +CR + L A ++L +M +PD+ T S+L+ + L +
Sbjct: 117 SYNILINCFCRRSQLPLALAVLGKMMKLGY-EPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
M PNTVT N ++ G K + ++ M+ + C+PD++T T+++ G
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV-ARGCQPDLFTYGTVVNGLCKRG 234
Query: 289 QIDM-------MEK----------------------------WYEKFRNFGIEPETRTFN 313
ID+ MEK + + N GI P T+N
Sbjct: 235 DIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYN 294
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
LI + S ++ M + + T++ +I+AF G E +D+M
Sbjct: 295 SLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 374 GMKADSKTFCCLINGFA----------------------NAGLFHKVISTVQLAEKFE-- 409
+ D T+ LINGF N ++ +I A++ E
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 410 -----------IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ NT YN ++ +A D +++FK+M + PPD TY+I+++
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 459 YRKEGMNDKIY----YLEQEK 475
K G +K YL++ K
Sbjct: 475 LCKYGKLEKALVVFEYLQKSK 495
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/241 (21%), Positives = 102/241 (42%), Gaps = 1/241 (0%)
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
K D L+ +M +P+ V N +LS K KFD + L +++ D+++
Sbjct: 59 LKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVIS-LGERMQNLRISYDLYS 117
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
N +I+ F Q+ + K G EP+ T + L+ Y + + +++ M
Sbjct: 118 YNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMF 177
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
+++ T T+N +I A D+M A G + D T+ ++NG G
Sbjct: 178 VMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDID 237
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+S ++ EK +I + Y ++ A +++ + +F M + P+ TY +I
Sbjct: 238 LALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLI 297
Query: 457 E 457
Sbjct: 298 R 298
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 60/157 (38%)
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P FN L+ A K +D + ++ E M+ L+ + +YN +I F
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAV 137
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
+M G + D T L+NG+ + + ++ V E NT +N ++
Sbjct: 138 LGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFL 197
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E + RM C PD TY ++ K G
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRG 234
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 152/338 (44%), Gaps = 4/338 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T L+ + + A L M+E G P Y A++ + C++ +++AF
Sbjct: 151 YEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAF 210
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
E++ + +P+V TY+ L+ ++ ++ L DM + I PN +T + +L
Sbjct: 211 DFFKEIERKGI-RPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDA 269
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K GK + +++ M+ S PD+ T +++I+ +ID + ++ + G
Sbjct: 270 FVKNGKVLEAKELFEEMVR-MSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLA 328
Query: 308 ETRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
+ ++N LI + K KR+ D M E M + T TYN +I+ F GD +
Sbjct: 329 DVVSYNTLINGFCKAKRVEDGMKLFRE-MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEF 387
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
F QM G+ D T+ L+ G + G K + + +K E+ + Y V+ K
Sbjct: 388 FSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCK 447
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ E +F + PD TYT M+ +G+
Sbjct: 448 TGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 134/284 (47%), Gaps = 4/284 (1%)
Query: 117 EVFDMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
+ FD KE P TY L+ L S + A +L + MI++ P+ TY+ALL
Sbjct: 208 DAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALL 267
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A+ ++ + EA + EM + PD+ TYS+LI + D +++ M ++
Sbjct: 268 DAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGC 326
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+ + V+ N +++G+ KA + + K+ M + V T NT+I F G +D +
Sbjct: 327 LADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV-TYNTLIQGFFQAGDVDKAQ 385
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+++ + FGI P+ T+NIL+G +K + E M+K + TY VI
Sbjct: 386 EFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGM 445
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
G + F + +G+K D T+ +++G GL H+V
Sbjct: 446 CKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 112/258 (43%), Gaps = 4/258 (1%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L+ DM P+ V N +LS K K+D + L +E + D++T N +I+ F
Sbjct: 72 LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVIS-LGKKMEVLGIRNDLYTFNIVINCF 130
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
Q+ + K G EP+ T L+ + ++ ++++ M ++ +
Sbjct: 131 CCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDI 190
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
YN +I++ + F ++ +G++ + T+ L+NG N+ + +
Sbjct: 191 VAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSD 250
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
K +I N Y+A+L A K ++E + +F+ M PD TY+ +I +
Sbjct: 251 MIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL---CL 307
Query: 465 NDKIYYLEQEKKTMITDG 482
+D+I Q M++ G
Sbjct: 308 HDRIDEANQMFDLMVSKG 325
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 100/244 (40%), Gaps = 36/244 (14%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T + L ++ + L+A E+F+ + S +P TY LI L + A Q+F
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSI-DPDIVTYSSLINGLCLHDRIDEANQMF 318
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ--------------- 200
M+ +GC +Y L+ +C++ +++ + EM L
Sbjct: 319 DLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQA 378
Query: 201 -------------------PDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
PD++TY+ L+ D + + +++EDM R + + VT
Sbjct: 379 GDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
V+ G K GK ++ + S L KPD+ T T++S G + +E Y K +
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCS-LSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497
Query: 302 NFGI 305
G+
Sbjct: 498 QEGL 501
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 161/363 (44%), Gaps = 19/363 (5%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y E TY LI K G H+A + M+ G PS TYT+L+ + C++ ++ A
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAM 365
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
L++M+ LC P+ TY+TL+ + + +M P+ VT N +++G
Sbjct: 366 EFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ GK + VL M E PDV + +T++S F +D + + GI+P
Sbjct: 425 HCVTGKMEDAIAVLEDMKEK-GLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKP 483
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+T T++ LI + ++R + + E M ++ P TY +I A+ GD +
Sbjct: 484 DTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLH 543
Query: 368 DQMRAEGMKADSKTFCCLINGFANAG-----------LFHK--VISTVQLAEKFEIAENT 414
++M +G+ D T+ LING LF++ V S V E N
Sbjct: 544 NEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNI 603
Query: 415 TFYNAVL---SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
F + V C K + E ++VF+ M PD T Y IMI + + G K Y L
Sbjct: 604 EFKSVVSLIKGFCMKGM-MTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTL 662
Query: 472 EQE 474
+E
Sbjct: 663 YKE 665
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 156/354 (44%), Gaps = 5/354 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY LI +G A LF M +GC P+ TY L+ YC+ +D+ F +
Sbjct: 203 PNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKL 262
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
L M L +P++ +Y+ +I + V + +M R + VT N ++ GY
Sbjct: 263 LRSMALKGL-EPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYC 321
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
K G F Q + + ML P V T ++I G ++ ++ ++ R G+ P
Sbjct: 322 KEGNFHQALVMHAEMLRH-GLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE 380
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
RT+ L+ + +K ++ V+ M F + TYN +I G ++ +
Sbjct: 381 RTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLED 440
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
M+ +G+ D ++ +++GF + + + + + I +T Y++++ +
Sbjct: 441 MKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRR 500
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
E +++ M PPD+ TYT +I AY EG +K L E M+ G+
Sbjct: 501 TKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNE---MVEKGV 551
Score = 108 bits (271), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 149/342 (43%), Gaps = 9/342 (2%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A +F M+E P+ TY L+ +C + +D A ++ ++M+ C P+V TY+TLI
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKG-CLPNVVTYNTLI 247
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
K D L MA + + PN ++ N+V++G + G+ ++ VL+ M
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEM-NRRGY 306
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
D T NT+I + G + + G+ P T+ LI + K ++
Sbjct: 307 SLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAME 366
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
++ MR TY +++ F+ G +M G T+ LING
Sbjct: 367 FLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHC 426
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
G I+ ++ ++ ++ + Y+ VLS ++ D+ E RV + M + PD
Sbjct: 427 VTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTI 486
Query: 451 TYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPEDEF 492
TY+ +I+ + ++ + L +E ++V P DEF
Sbjct: 487 TYSSLIQGFCEQRRTKEACDLYEEM-------LRVGLPPDEF 521
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 141/316 (44%), Gaps = 4/316 (1%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFK-FDL 221
C + + ++ +Y R +L+D+A SI++ + H P V +Y+ ++ + + +
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGF-MPGVLSYNAVLDATIRSKRNISF 188
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
E ++++M + PN T NI++ G+ AG D + M E+ C P+V T NT+I
Sbjct: 189 AENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKM-ETKGCLPNVVTYNTLI 247
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
+ + +ID K G+EP ++N++I ++ ++S V+ M + +
Sbjct: 248 DGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYS 307
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
TYN +I+ + G+ +M G+ T+ LI+ AG ++ +
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ + N Y ++ ++ + E RV + M DN P TY +I +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 462 EG-MNDKIYYLEQEKK 476
G M D I LE K+
Sbjct: 428 TGKMEDAIAVLEDMKE 443
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/350 (20%), Positives = 140/350 (40%), Gaps = 54/350 (15%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+E D ++ P E TY L+ + G + A ++ M + G PS TY AL
Sbjct: 363 RAMEFLDQMRVRGLC-PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNAL 421
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ +C + +++A ++L +MK L PDV +YST++ ++ D + +M +
Sbjct: 422 INGHCVTGKMEDAIAVLEDMKEKGL-SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKG 480
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
I P+T+T + ++ G+ + + + + ML PD +T +I+ + G ++
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR-VGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGK-------KRMYDKM------------STVMEY 334
+ + + G+ P+ T+++LI K KR+ K+ T++E
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 335 MRKLQFPWTTS-------------------------------TYNNVIEAFTDVGDAKNM 363
++F S YN +I GD +
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST-VQLAEKFEIAE 412
+ +M G + T L+ G +++ S V + E++E
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSE 709
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 179/402 (44%), Gaps = 41/402 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+AL+VF+ +K+ + P TY LI +L ++G+ A +L +M + G P+ T +
Sbjct: 361 EALKVFEEMKKDA--APNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ C+S LDEA ++ EM ++ +C PD T+ +LI + D +YE M
Sbjct: 419 VDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSD 477
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
N++ ++ + G+ + K+ M+ + +C PD+ +NT + G+ +
Sbjct: 478 CRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMI-NQNCSPDLQLLNTYMDCMFKAGEPEKG 536
Query: 294 EKWYE--KFRNF---------------------------------GIEPETRTFNILIGA 318
+E K R F G +TR +NI+I
Sbjct: 537 RAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDG 596
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
+ K +K ++E M+ F T TY +VI+ + F++ +++ ++ +
Sbjct: 597 FCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
+ LI+GF G + ++ + + N +N++L A KAE++ E F+
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQ 716
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEGMNDK--IYYLEQEKKTM 478
MK+ +C P+ TY I+I K +K +++ E +K+ M
Sbjct: 717 SMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGM 758
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 129/275 (46%), Gaps = 3/275 (1%)
Query: 118 VFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
+F+ +K F P +Y LI L K+G + +LF +M E+GC Y ++ +
Sbjct: 539 MFEEIKARRFV-PDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGF 597
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN 237
C+ +++A+ +L EMK +P V TY ++I + D +L+E+ ++ I N
Sbjct: 598 CKCGKVNKAYQLLEEMKTKGF-EPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELN 656
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWY 297
V + ++ G+GK G+ D+ +L +++ P+++T N+++ +I+ +
Sbjct: 657 VVIYSSLIDGFGKVGRIDEAYLILEELMQK-GLTPNLYTWNSLLDALVKAEEINEALVCF 715
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
+ + P T+ ILI K R ++K + M+K +T +Y +I
Sbjct: 716 QSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKA 775
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
G+ FD+ +A G DS + +I G +N
Sbjct: 776 GNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNG 810
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/392 (22%), Positives = 164/392 (41%), Gaps = 39/392 (9%)
Query: 103 LSERIEKKQWL-QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE 161
+ +R+ K Q L +A +F+ + ++ P E T+ LI LGK G+ A +++ M++
Sbjct: 418 MVDRLCKSQKLDEACAMFEEM-DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDS 476
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
C + YT+L+ + ++ I +M N C PD+ +T + A + +
Sbjct: 477 DCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN-CSPDLQLLNTYMDCMFKAGEPEK 535
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
++E++ AR +P+ + +I++ G KAG ++ ++ SM E C D N +I
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQ-GCVLDTRAYNIVI 594
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
F G+++ + E+ + G EP T+ +I K D+ + E + +
Sbjct: 595 DGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIE 654
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM---------------KA--------- 377
Y+++I+ F VG +++ +G+ KA
Sbjct: 655 LNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVC 714
Query: 378 -----------DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
+ T+ LING F+K Q +K + +T Y ++S K
Sbjct: 715 FQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAK 774
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
A ++ E +F R K N PD Y MIE
Sbjct: 775 AGNIAEAGALFDRFKANGGVPDSACYNAMIEG 806
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 145/370 (39%), Gaps = 36/370 (9%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+Y L++++ + Q+ M G PS T ++ ++N L E + ++ M
Sbjct: 100 SYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMM 159
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ +P Y+TLI D++ L++ M P ++ G+ K G+
Sbjct: 160 RKFKF-RPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGR 218
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
D +L M +S+S D+ N I FG +G++DM K++ + G++P+ T+
Sbjct: 219 VDSALSLLDEM-KSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYT 277
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
+IG K D+ + E++ K + T YN +I + G ++ RA+
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 374 G------------------------------MKADS----KTFCCLINGFANAGLFHKVI 399
G MK D+ T+ LI+ AG
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAF 397
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+K + N N ++ K++ L E +F+ M C PD+ T+ +I+
Sbjct: 398 ELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGL 457
Query: 460 RKEGMNDKIY 469
K G D Y
Sbjct: 458 GKVGRVDDAY 467
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 120/312 (38%), Gaps = 4/312 (1%)
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
P PE +L N E F P C P+ +Y++L+ FD ++
Sbjct: 63 PQPEFVIGVLRRLKDVNRAIEYFRWYERRTELPHC-PE--SYNSLLLVMARCRNFDALDQ 119
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
+ +M+ P+ T ++ G KA K + V+ M+ +P T+I F
Sbjct: 120 ILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQ-MMRKFKFRPAFSAYTTLIGAF 178
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+ DMM +++ + G EP F LI + K+ D ++++ M+
Sbjct: 179 SAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADI 238
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
YN I++F VG F ++ A G+K D T+ +I A + + +
Sbjct: 239 VLYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
EK T YN ++ A E + +R + P Y ++ RK G
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 465 NDKIYYLEQEKK 476
D+ + +E K
Sbjct: 359 VDEALKVFEEMK 370
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/402 (22%), Positives = 168/402 (41%), Gaps = 36/402 (8%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+ T++ L+ K+ A+ + D + E Y+P T+ LI L + A L
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLC-- 199
M++ GC P TY ++ C+ +D A S+L +M+ LC
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKY 271
Query: 200 ------------------QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
+PDVFTYS+LI + ++ L DM R I PN VT
Sbjct: 272 KHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
+ ++ + K GK + EK+ M++ S PD++T +++I+ F ++D + +E
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 390
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+ P T++ LI + K + ++ + M + T TY +I F D
Sbjct: 391 SKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 450
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
N + F QM + G+ + T+ L++G G K + + ++ + + YN ++
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
KA + + +F + P+ Y MI + ++G
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKG 552
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 159/359 (44%), Gaps = 6/359 (1%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ + L + K AL +F + P TY LI L G+ A +L +
Sbjct: 262 NTIIDGLCKY---KHMDDALNLFTEMDNKGI-RPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
MIE +P+ T++AL+ A+ + L EA + +EM + PD+FTYS+LI
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI-DPDIFTYSSLINGFCMH 376
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
+ D + ++E M ++ PN VT + ++ G+ KA + ++ ++ M + V T
Sbjct: 377 DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV-T 435
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
T+I F D + +++ + G+ P T+NIL+ K K V EY++
Sbjct: 436 YTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQ 495
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
+ TYN +IE G ++ F + +G+ + + +I+GF G
Sbjct: 496 RSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKE 555
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+ S ++ ++ N+ YN ++ A + D + K M+ D +T ++
Sbjct: 556 EADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 136/326 (41%), Gaps = 2/326 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY I + Q A + M++ G +P T ++LL YC S + +A +++++M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+PD FT++TLI K L + M R P+ VT V++G K G
Sbjct: 180 VEMGY-KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGD 238
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
D +L M E + DV NTII +D + + N GI P+ T++
Sbjct: 239 IDLALSLLKKM-EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
LI + S ++ M + + T++ +I+AF G E +D+M
Sbjct: 298 SLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 357
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
+ D T+ LINGF + +L + N Y+ ++ KA+ + E
Sbjct: 358 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEG 417
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEAY 459
+F+ M + TYT +I +
Sbjct: 418 MELFREMSQRGLVGNTVTYTTLIHGF 443
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 140/336 (41%), Gaps = 2/336 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T L+ S + A L M+E G P T+T L+ N EA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++++M CQPD+ TY T++ DL L + M I + V N ++ G
Sbjct: 209 ALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
K D + + M ++ +PDV+T +++IS N G+ + I P
Sbjct: 268 LCKYKHMDDALNLFTEM-DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINP 326
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
TF+ LI A+ K+ + + + M K TY+++I F ++ F
Sbjct: 327 NVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMF 386
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+ M ++ + T+ LI GF A + + + + + NT Y ++ +A
Sbjct: 387 ELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
D + VFK+M P+ TY I+++ K G
Sbjct: 447 RDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 134/312 (42%), Gaps = 8/312 (2%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A LF M++ PS + LL+A + N + S+ +M+ + D++TYS I
Sbjct: 67 AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIFI 125
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ L + M P+ VT + +L+GY + + ++ M+E
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE-MGY 184
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
KPD +T T+I + ++ G +P+ T+ ++ K+ D +
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 331 VMEYMRKLQFPWTTSTYNNVIEA---FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
+++ M K + YN +I+ + + DA N+ F +M +G++ D T+ LI+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNL---FTEMDNKGIRPDVFTYSSLIS 301
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
N G + + + +I N ++A++ A K L+E E+++ M P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 448 DDTTYTIMIEAY 459
D TY+ +I +
Sbjct: 362 DIFTYSSLINGF 373
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 104/250 (41%), Gaps = 3/250 (1%)
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
D K D L+ DM P+ V N +LS K KF ++ L +++ D+
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-ELVISLGEQMQTLGISHDL 118
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY-GKKRMYDKMSTVME 333
+T + I+ F Q+ + K G EP+ T + L+ Y KR+ D ++ V +
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV-D 177
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
M ++ + T T+ +I A DQM G + D T+ ++NG G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
+S ++ EK +I + YN ++ K + + + +F M + PD TY+
Sbjct: 238 DIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYS 297
Query: 454 IMIEAYRKEG 463
+I G
Sbjct: 298 SLISCLCNYG 307
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 178/434 (41%), Gaps = 70/434 (16%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+ T++ L+ K+ A+ + D + E Y+P T+ LI L + A L
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALV 211
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M++ GC P TY ++ C+ +D A ++LN+M+ + + +V ++T+I
Sbjct: 212 DQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARI-KANVVIFNTIIDSLCK 270
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
++ L+ +M + I PN VT N +++ G++ ++LS+MLE P+V
Sbjct: 271 YRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-KINPNVV 329
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
T N +I F G++ EK +E+ I+P+T T+N+LI + D+ + ++M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 336 --------------------------------RKLQ---FPWTTSTYNNVIEAFTDVGDA 360
R++ T TY +I+ F GD
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
+ + F QM + + D T+ L++G + G + + +K E+ N YN +
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509
Query: 421 LSACTKAED--------------------------------LMEMERVFKRMKDNQCPPD 448
+ KA L E + +F++MK++ P+
Sbjct: 510 IEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPN 569
Query: 449 DTTYTIMIEAYRKE 462
TY +I A ++
Sbjct: 570 SGTYNTLIRANLRD 583
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 142/342 (41%), Gaps = 8/342 (2%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T L+ S + A L M+E G P T+T L+ N EA
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++++M CQPD+ TY T++ DL L M A I N V N ++
Sbjct: 209 ALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDS 267
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
K + + + M E+ +P+V T N++I+ N G+ + I P
Sbjct: 268 LCKYRHVEVAVDLFTEM-ETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINP 326
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF---TDVGDAKNME 364
TFN LI A+ K+ + + E M + T TYN +I F + +AK M
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQM- 385
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
F M ++ + +T+ LINGF + + + + NT Y ++
Sbjct: 386 --FKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+A D + VFK+M N+ P D TY+I++ G D
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLD 485
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 154/391 (39%), Gaps = 52/391 (13%)
Query: 115 ALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
A+++F DM+K F P + KL+ + K + L M G TY+
Sbjct: 67 AVDLFGDMVKSRPF--PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIF 124
Query: 174 LAAYCRSNLLDEAFSILNEMKN--------------HPLC-------------------- 199
+ +CR + L A ++L +M + C
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 200 QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
+PD FT++TLI K L + M R P+ VT V++G K G D
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
+L+ M E+ K +V NTII +++ + + GI P T+N LI
Sbjct: 245 LLNKM-EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCL 303
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
+ S ++ M + + T+N +I+AF G E ++M + D+
Sbjct: 304 CNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDT 363
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAE----NTTFYNAVLSA---CTKAEDLME 432
T+ LINGF H + + KF +++ N YN +++ C + ED +E
Sbjct: 364 ITYNLLINGFC----MHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ F+ M + TYT +I+ + + G
Sbjct: 420 L---FREMSQRGLVGNTVTYTTIIQGFFQAG 447
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 144/330 (43%), Gaps = 11/330 (3%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
P TY LI L G+ A +L + M+E+ +P+ T+ AL+ A+ + L EA
Sbjct: 290 RPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEK 349
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM + PD TY+ LI + D + +++ M ++ +PN T N +++G+
Sbjct: 350 LHEEMIQRSI-DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K + + ++ M + V T TII F G D + +++ + + +
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTV-TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTD 467
Query: 309 TRTFNILIG---AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEY 365
T++IL+ +YGK D + +Y++K + YN +IE G
Sbjct: 468 IMTYSILLHGLCSYGK---LDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGE--- 521
Query: 366 TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
+D + +K D T+ +I+G + L + + ++ N+ YN ++ A
Sbjct: 522 AWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANL 581
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+ D + K M+ + D +T +++
Sbjct: 582 RDCDRAASAELIKEMRSSGFVGDASTISLV 611
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 32/259 (12%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY LI + A+Q+F M+ + C P+ +TY L+ +C+ +++
Sbjct: 360 DPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM L V TY+T+I+ A D +++++ M + + + +T +I+L G
Sbjct: 420 LFREMSQRGLVGNTV-TYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGL 478
Query: 249 GKAGKFD------------QMEK---VLSSMLE----------------STSCKPDVWTM 277
GK D +ME + ++M+E S S KPDV T
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTY 538
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
NT+IS + + + + K + G P + T+N LI A + + +++ MR
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRS 598
Query: 338 LQFPWTTSTYNNVIEAFTD 356
F ST + V D
Sbjct: 599 SGFVGDASTISLVTNMLHD 617
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 99/250 (39%), Gaps = 3/250 (1%)
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
D K D L+ DM P+ V N +LS K KF ++ L +++ D+
Sbjct: 60 DIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKF-ELVISLGEQMQTLGISHDL 118
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY-GKKRMYDKMSTVME 333
+T + I+ F Q+ + K G EP+ T + L+ Y KR+ D ++ V +
Sbjct: 119 YTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALV-D 177
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
M ++ + T T+ +I A DQM G + D T+ ++NG G
Sbjct: 178 QMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRG 237
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
++ + E I N +N ++ + K + +F M+ P+ TY
Sbjct: 238 DIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYN 297
Query: 454 IMIEAYRKEG 463
+I G
Sbjct: 298 SLINCLCNYG 307
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 161/357 (45%), Gaps = 19/357 (5%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ + D + E Y+P T+ LI L + A L M++ GC P TY A++
Sbjct: 167 AVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ D A ++LN+M+ + + +V YST+I D L+ +M + +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKI-EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN +T + ++S G++ ++LS M+E P++ T + +I F G++ E
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIER-KINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM-RKLQFPWTTSTYNNVIEA 353
K YE+ I+P T++ LI + + ++E M RK P TYN +I
Sbjct: 344 KLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLP-NVVTYNTLING 402
Query: 354 FTDVGDA-KNMEYTFDQMRAEGMKADSKTFCCLINGF------ANAGLFHKVISTVQLAE 406
F K ME F +M G+ ++ T+ LI+GF NA + K + +V
Sbjct: 403 FCKAKRVDKGME-LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG--- 458
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ N YN +L K L + VF+ ++ + PD TY IMIE K G
Sbjct: 459 ---VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAG 512
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 114/247 (46%), Gaps = 3/247 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL +F + E+ P TY LI L G+ A +L + MIE +P+ T++AL+
Sbjct: 272 ALNLFTEM-ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALI 330
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A+ + L +A + EM + P++FTYS+LI + + + E M +
Sbjct: 331 DAFVKKGKLVKAEKLYEEMIKRSI-DPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+PN VT N +++G+ KA + D+ ++ M + V T T+I F D +
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQ 448
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+++ + G+ P T+NIL+ K K V EY+++ TYN +IE
Sbjct: 449 MVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGM 508
Query: 355 TDVGDAK 361
G K
Sbjct: 509 CKAGKWK 515
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/302 (22%), Positives = 130/302 (43%), Gaps = 2/302 (0%)
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF 217
M++ G +P T +LL +C N + +A +++++M +PD T++TLI
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY-KPDTVTFTTLIHGLFLHN 197
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
K L + M R P+ VT V++G K G D +L+ M E+ + +V
Sbjct: 198 KASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKM-EAAKIEANVVIY 256
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
+T+I D + + N G+ P T++ LI + S ++ M +
Sbjct: 257 STVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIE 316
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
+ T++ +I+AF G E +++M + + T+ LINGF +
Sbjct: 317 RKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGE 376
Query: 398 VISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
++L + + N YN +++ KA+ + + +F+ M + TYT +I
Sbjct: 377 AKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIH 436
Query: 458 AY 459
+
Sbjct: 437 GF 438
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 119/306 (38%), Gaps = 2/306 (0%)
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
G + TY L+ +CR + L A ++L +M +PD+ T ++L+ +
Sbjct: 108 GISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGY-EPDIVTLNSLLNGFCHGNRISD 166
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
L + M P+TVT ++ G K + ++ M++ C+PD+ T ++
Sbjct: 167 AVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQR-GCQPDLVTYGAVV 225
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
+ G D+ K IE ++ +I + K R D + M
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
TY+++I + G + M + + TF LI+ F G K
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ K I N Y+++++ + L E +++ + M C P+ TY +I + K
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405
Query: 462 EGMNDK 467
DK
Sbjct: 406 AKRVDK 411
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/283 (20%), Positives = 123/283 (43%), Gaps = 6/283 (2%)
Query: 183 LDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
LD+A + M ++ P P + +S L+ KFDLV E M I N T
Sbjct: 59 LDDAIGLFGVMAQSRPF--PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
NI+++ + + + +L M++ +PD+ T+N++++ F + +I ++
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMK-LGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMV 175
Query: 302 NFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA 360
G +P+T TF LI G + + + ++ + +++ P TY V+ GD
Sbjct: 176 EMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQP-DLVTYGAVVNGLCKRGDT 234
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
++M A ++A+ + +I+ ++ E + N Y+++
Sbjct: 235 DLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 294
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+S + R+ M + + P+ T++ +I+A+ K+G
Sbjct: 295 ISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKG 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/260 (19%), Positives = 101/260 (38%), Gaps = 1/260 (0%)
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
+ Y +++ + + D L+ MA P+ + + +LS K KFD +
Sbjct: 44 YDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEK 103
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M E +++T N +I+ F ++ + K G EP+ T N L+ +
Sbjct: 104 M-EILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGN 162
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+++ M ++ + T T+ +I A D+M G + D T+
Sbjct: 163 RISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYG 222
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
++NG G ++ + E +I N Y+ V+ + K + +F M++
Sbjct: 223 AVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENK 282
Query: 444 QCPPDDTTYTIMIEAYRKEG 463
P+ TY+ +I G
Sbjct: 283 GVRPNVITYSSLISCLCNYG 302
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 174/416 (41%), Gaps = 38/416 (9%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+ T++ L+ K+ +A+ + D + Y+P T+ LI L + A L
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTG-YQPNTVTFNTLIHGLFLHNKASEAMALI 209
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M+ +GC P TY ++ C+ D AF++LN+M+ L +P V Y+T+I
Sbjct: 210 DRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKL-EPGVLIYNTIIDGLCK 268
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
D L+++M + I PN VT + ++S G++ ++LS M+E PDV+
Sbjct: 269 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-KINPDVF 327
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP---------------------------- 307
T + +I F G++ EK Y++ I+P
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 387
Query: 308 -------ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA 360
+ T+N LI + K + ++ V M + T TYN +I+ GD
Sbjct: 388 VSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDC 447
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
+ F +M ++G+ + T+ L++G G K + + ++ ++ YN +
Sbjct: 448 DMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 507
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+ KA + + +F + PD Y MI + ++G ++ L +E K
Sbjct: 508 IEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMK 563
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 153/347 (44%), Gaps = 4/347 (1%)
Query: 119 FDMLK--EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
F++L E EP Y +I L K A LF M +G P+ TY++L++
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP 236
C +A +L++M + PDVFT+S LI V K E LY++M RSI P
Sbjct: 301 LCNYGRWSDASRLLSDMIERKI-NPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKW 296
+ VT + +++G+ + D+ +++ M+ S C PDV T NT+I F +++ +
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMV-SKHCFPDVVTYNTLIKGFCKYKRVEEGMEV 418
Query: 297 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD 356
+ + G+ T T+NILI + D + + M P TYN +++
Sbjct: 419 FREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCK 478
Query: 357 VGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF 416
G + F+ ++ M+ T+ +I G AG + +
Sbjct: 479 NGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538
Query: 417 YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
YN ++S + E + +FK MK++ P+ Y +I A ++G
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 135/284 (47%), Gaps = 9/284 (3%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
+++ + ++A +++D + + S +P TY LI + A+Q+F M+ + C P
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSI-DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
TY L+ +C+ ++E + EM L V TY+ LI+ A D+ + ++
Sbjct: 396 VVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYNILIQGLFQAGDCDMAQEIF 454
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
++M + + PN +T N +L G K GK ++ V+ L+ + +P ++T N +I
Sbjct: 455 KEMVSDGVPPNIMTYNTLLDGLCKNGKLEK-AMVVFEYLQRSKMEPTIYTYNIMIEGMCK 513
Query: 287 MGQIDMMEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT 343
G++ E ++ F N G++P+ +N +I + +K ++ + + M++
Sbjct: 514 AGKV---EDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPN 570
Query: 344 TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
+ YN +I A GD + +MR+ G D+ T + N
Sbjct: 571 SGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTN 614
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/359 (22%), Positives = 149/359 (41%), Gaps = 16/359 (4%)
Query: 115 ALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
A+ +F +M+K F P + KL+ + K + L M G + TY+ L
Sbjct: 65 AVALFGEMVKSRPF--PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 122
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ +CR + L A ++L +M +P++ T S+L+ + + L + M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGY-EPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
PNTVT N ++ G K + ++ M+ + C+PD+ T +++ G D+
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMV-AKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K +EP +N +I K + D + + M TY+++I
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE---KFEI 410
+ G + M + D TF LI+ F G K++ +L + K I
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEG---KLVEAEKLYDEMVKRSI 357
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK-----EGM 464
+ Y+++++ + L E +++F+ M C PD TY +I+ + K EGM
Sbjct: 358 DPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGM 416
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/240 (20%), Positives = 97/240 (40%), Gaps = 1/240 (0%)
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
K D L+ +M P+ + + +LS K KFD + L +++ + +T
Sbjct: 60 LKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVIS-LGEQMQNLGIPHNHYT 118
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
+ +I+ F Q+ + K G EP T + L+ Y + + +++ M
Sbjct: 119 YSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMF 178
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
+ T T+N +I A D+M A+G + D T+ ++NG G
Sbjct: 179 VTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTD 238
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ + E+ ++ YN ++ K + + + +FK M+ P+ TY+ +I
Sbjct: 239 LAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLI 298
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 155/350 (44%), Gaps = 8/350 (2%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YEP T LI + + A L + M E G P Y ++ C+ L+++A
Sbjct: 135 YEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAV 194
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ + M+ + + D TY++L+ + ++ L DM R I+PN +T V+
Sbjct: 195 ELFDRMERDGV-RADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDV 253
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K GKF + K+ M PDV+T N++I+ G++D ++ + G P
Sbjct: 254 FVKEGKFSEAMKLYEEMTRRCV-DPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP 312
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ T+N LI + K + D+ + + M + T TYN +I+ + G + F
Sbjct: 313 DVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF 372
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+M + + + +T+ L+ G K + + +K EI + T YN V+ K
Sbjct: 373 SRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKI 429
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY---RKEGMNDKIYYLEQE 474
++ + +F+ + PD +YT MI + R+ +D +Y QE
Sbjct: 430 GNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 146/327 (44%), Gaps = 35/327 (10%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V TV+ ++ + + A+++ ++E F P Y +I K G + A +LF
Sbjct: 139 VVTVSSLINGFCQGNRVFDAIDLVSKMEEMGF-RPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M +G TY +L+A C S +A ++ +M + P+V T++ +I V
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV-PNVITFTAVIDVFVK 256
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
KF LYE+M R + P+ T N +++G G+ D+ +++L M+ + C PDV
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV-TKGCLPDVV 315
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY-------GKKRMYDKM 328
T NT+I+ F ++D K + + G+ +T T+N +I Y + ++ +M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375
Query: 329 ST-------------------------VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
+ + E M+K + +TYN VI +G+ ++
Sbjct: 376 DSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDA 435
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFA 390
F + +G+K D ++ +I+GF
Sbjct: 436 WDLFRSLSCKGLKPDVVSYTTMISGFC 462
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 6/259 (2%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L+ M +P+ V + VLS K+ +D + + M E D+++ N +I+
Sbjct: 56 LFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHM-EVCGIGHDLYSYNIVINCL 114
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWT 343
+ + K FG EP+ T + LI + + R++D + V + M ++ F
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSK-MEEMGFRPD 173
Query: 344 TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ 403
YN +I+ +G + FD+M +G++AD+ T+ L+ G +G + ++
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 404 LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+I N + AV+ K E ++++ M PD TY +I G
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 464 MNDKIYYLEQEKKTMITDG 482
D+ +Q M+T G
Sbjct: 294 RVDEA---KQMLDLMVTKG 309
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 36/380 (9%)
Query: 112 WLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
+L+A+ +FD + E P T+ LI L G+ A L M+ +G TY
Sbjct: 207 FLEAVALFDQMVEIGL-TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMA 230
++ C+ A ++L++M+ + +PDV YS +I + C D D + L+ +M
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSD-AQYLFSEML 323
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ I PN T N ++ G+ G++ +++L M+E PDV T N +IS G++
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGKL 382
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGK-------KRMYDKMST------------- 330
EK ++ + I P+T T+N +I + K K M+D M++
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 331 --------VMEYMRKLQ---FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
M+ +R++ T+TYN +I F +V + + F +M + G+ D+
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
T L+ GF + + ++ + +I +T YN ++ K + E +F
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 440 MKDNQCPPDDTTYTIMIEAY 459
+ + PD TY +MI +
Sbjct: 563 LPIHGVEPDVQTYNVMISGF 582
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 151/354 (42%), Gaps = 6/354 (1%)
Query: 124 EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
E + +P Y +I L K G A+ LF+ M+E+G P+ TY ++ +C
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
+A +L +M + PDV T++ LI V K E L ++M R I P+TVT N
Sbjct: 348 SDAQRLLRDMIEREI-NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
++ G+ K +FD + + M PDV T NTII V+ ++D + +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G+ T T+N LI + + + + + M T T N ++ F + +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
F+ ++ + D+ + +I+G + + + YN ++S
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
+ + +F +MKDN PD++TY +I K G DK L E ++
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 124/287 (43%), Gaps = 7/287 (2%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T +S +++ + +A ++ D + + P TY +I K + A+ +F
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M P T+ ++ YCR+ +DE +L E+ L + TY+TLI +
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCE 479
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
+ + L+++M + + P+T+T NI+L G+ + K ++ + L +++ + D
Sbjct: 480 VDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTV 538
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
N II ++D + G+EP+ +T+N++I + K + + M
Sbjct: 539 AYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
+ STYN +I G+ +MR+ G D+ T
Sbjct: 599 KDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 105/250 (42%), Gaps = 7/250 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A +FD++ P T+ +I + ++ + QL + G + TY L+
Sbjct: 420 AKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+C + L+ A + EM +H +C PD T + L+ + K + L+E + I
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+TV NI++ G K K D+ + S L +PDV T N +IS F I
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ K ++ G EP+ T+N LI K DK ++ MR F T E
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEII 652
Query: 355 TDVGDAKNME 364
V D + +E
Sbjct: 653 CRVSDEEIIE 662
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 141/353 (39%), Gaps = 25/353 (7%)
Query: 115 ALEVFD-MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
A++ FD M++ FY + K+I + + +P A L+ M + ++ L
Sbjct: 90 AIDFFDYMVRSRPFYTAVDCN--KVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNIL 147
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ +C + L + S ++ QPDV T++TL+ L ED
Sbjct: 148 IKCFCDCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHG-----------LCLED----- 190
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+++ + L GY F + + M+E P V T NT+I+ G++
Sbjct: 191 ----RISEALALFGYMVETGFLEAVALFDQMVE-IGLTPVVITFNTLINGLCLEGRVLEA 245
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K G+ + T+ ++ K ++ M + Y+ +I+
Sbjct: 246 AALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDR 305
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
G + +Y F +M +G+ + T+ C+I+GF + G + ++ + EI +
Sbjct: 306 LCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPD 365
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+NA++SA K L E E++ M PD TY MI + K D
Sbjct: 366 VLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 163/399 (40%), Gaps = 41/399 (10%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY K++ K G A Q + ++E G DP TYT+L+ YC+ LD AF +
Sbjct: 216 PNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275
Query: 190 LNEM------KN--------HPLCQ--------------------PDVFTYSTLIKP-CV 214
NEM +N H LC P V TY+ LIK C
Sbjct: 276 FNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCG 335
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
K + + L+ E M I PN T +++ KF++ ++L MLE P+V
Sbjct: 336 SERKSEALNLVKE-MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEK-GLMPNV 393
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
T N +I+ + G I+ E + + P TRT+N LI Y K ++ M + +
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKM 453
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+ + P TYN++I+ G+ + M G+ D T+ +I+ +
Sbjct: 454 LERKVLP-DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTI 454
+ E+ + N Y A++ KA + E + ++M C P+ T+
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572
Query: 455 MIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPEDEFF 493
+I +G + LE++ M+ G++ + D
Sbjct: 573 LIHGLCADGKLKEATLLEEK---MVKIGLQPTVSTDTIL 608
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 153/349 (43%), Gaps = 5/349 (1%)
Query: 117 EVFDMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
E +++KE + +P TY LI L + +AR+L M+E+G P+ TY AL+
Sbjct: 341 EALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALI 400
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
YC+ ++++A ++ M++ L P+ TY+ LIK + + +L M R +
Sbjct: 401 NGYCKRGMIEDAVDVVELMESRKL-SPNTRTYNELIKGYCKSNVHKAMGVL-NKMLERKV 458
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+P+ VT N ++ G ++G FD ++L S++ PD WT ++I +++
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLL-SLMNDRGLVPDQWTYTSMIDSLCKSKRVEEAC 517
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
++ G+ P + LI Y K D+ ++E M + T+N +I
Sbjct: 518 DLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGL 577
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G K ++M G++ T LI+ G F S Q +
Sbjct: 578 CADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDA 637
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
Y + + L++ E + +M++N PD TY+ +I+ Y G
Sbjct: 638 HTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 142/343 (41%), Gaps = 39/343 (11%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A++V ++++ P TY +LI KS H+A + M+E P TY +L+
Sbjct: 412 AVDVVELMESRKL-SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLI 469
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
CRS D A+ +L+ M + L PD +TY+++I + + + L++ + + +
Sbjct: 470 DGQCRSGNFDSAYRLLSLMNDRGLV-PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGV 528
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN V ++ GY KAGK D+ +L ML S +C P+ T N +I G++
Sbjct: 529 NPNVVMYTALIDGYCKAGKVDEAHLMLEKML-SKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
EK G++P T ILI K +D + + M TY I+ +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G + E +MR G+ D T+ LI G+ + G T
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG-------------------QT 688
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
F VL KRM+D C P T+ +I+
Sbjct: 689 NFAFDVL----------------KRMRDTGCEPSQHTFLSLIK 715
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 165/387 (42%), Gaps = 38/387 (9%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P + TY +I L KS + A LF ++ ++G +P+ YTAL+ YC++ +DEA +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554
Query: 190 LNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L +M + C P+ T++ LI C D K LL E M + P T I++
Sbjct: 555 LEKMLSKN-CLPNSLTFNALIHGLCADG-KLKEATLLEEKMVKIGLQPTVSTDTILIHRL 612
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K G FD ML S + KPD T T I + G++ E K R G+ P+
Sbjct: 613 LKDGDFDHAYSRFQQMLSSGT-KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPD 671
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN------ 362
T++ LI YG + V++ MR + T+ ++I+ ++ K
Sbjct: 672 LFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPE 731
Query: 363 -------MEY-----TFDQMRAEGMKADSKTFCCLINGFANAG---LFHKVISTVQLAEK 407
ME+ ++M + ++K++ LI G G + KV +Q E
Sbjct: 732 LCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEG 791
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
I+ + +NA+LS C K + E +V M P + ++I K+G ++
Sbjct: 792 --ISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKER 849
Query: 468 -----------IYYLEQEKKTMITDGI 483
YY ++ +I DG+
Sbjct: 850 GTSVFQNLLQCGYYEDELAWKIIIDGV 876
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 157/384 (40%), Gaps = 55/384 (14%)
Query: 124 EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
+HS Y +Y L+ LL +G ++ MI+ CD + L CR
Sbjct: 120 KHSVY-----SYASLLTLLINNGYVGVVFKIRLLMIK-SCDSVGDALYVL--DLCRKMNK 171
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
DE F E+K + + Y+TL+ D ++ +Y +M + PN T N
Sbjct: 172 DERF----ELKYKLI----IGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII-------------SVFGNM--- 287
+++GY K G ++ + +S ++E+ PD +T ++I VF M
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEA-GLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 288 -------------------GQIDMMEKWYEKFRNFGIEPETRTFNILIGAY-GKKRMYDK 327
+ID + K ++ P RT+ +LI + G +R +
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
++ V E M + TY +I++ + QM +G+ + T+ LIN
Sbjct: 343 LNLVKE-MEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALIN 401
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
G+ G+ + V+L E +++ NT YN ++ K+ ++ + V +M + + P
Sbjct: 402 GYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLP 460
Query: 448 DDTTYTIMIEAYRKEGMNDKIYYL 471
D TY +I+ + G D Y L
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRL 484
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 108/278 (38%), Gaps = 19/278 (6%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY I + G+ A + M E G P TY++L+ Y + AF
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCV------------------DAFKFDLVELLYEDMA 230
+L M++ C+P T+ +LIK + + +FD V L E M
Sbjct: 694 VLKRMRDTG-CEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMV 752
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
S+ PN + ++ G + G EKV M + P N ++S + +
Sbjct: 753 EHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH 812
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ K + G P+ + +LI KK ++ ++V + + + + + +
Sbjct: 813 NEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKII 872
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING 388
I+ G + F+ M G K S+T+ LI G
Sbjct: 873 IDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 12/339 (3%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P G LI L K G+ +A +L+ + +G T ALL C + LDEAF I
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
E+ C D +Y+TLI C K D + ++M R + P+ T +I++ G
Sbjct: 528 QKEILGRG-CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG-- 584
Query: 250 KAGKFDQMEKVLSSMLESTSCK-----PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 304
M KV ++ CK PDV+T + +I + + ++++++ +
Sbjct: 585 ----LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
++P T +N LI AY + + E M+ ++TY ++I+ + + + +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
F++MR EG++ + + LI+G+ G KV ++ + N Y ++
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ ++ E R+ M++ PD TY I Y K+G
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 154/387 (39%), Gaps = 42/387 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+++F ++E P T+ +I LG G+ A M+E G +P+ TY+ L
Sbjct: 278 EAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 174 LAAYCRSNLLDEAFSILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
+ R+ + +A+ +L EM K P P+V Y+ LI ++A + + + M +
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFP---PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLE-----------STSC---------- 270
+ + + T N ++ GY K G+ D E++L ML S C
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 271 -------------KPDVWTMNTIISVFGNMGQ-IDMMEKWYEKFRNFGIEPETRTFNILI 316
P + T+IS G+ +E W++ F N G +TRT N L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ-FLNKGFVVDTRTSNALL 512
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
+ D+ + + + +YN +I D+M G+K
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 377 ADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
D+ T+ LI G N + I ++ + + Y+ ++ C KAE E +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 437 FKRMKDNQCPPDDTTYTIMIEAYRKEG 463
F M P+ Y +I AY + G
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 160/369 (43%), Gaps = 5/369 (1%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
IE +A+E+ D++ TY LI K+GQ A +L M+ G + +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGL-SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
++T+++ C + D A + EM + P +TLI K L+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNM-SPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ + +T T N +L G +AGK D+ ++ +L C D + NT+IS
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL-GRGCVMDRVSYNTLISGCCG 552
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
++D + ++ G++P+ T++ILI G + ++ + + + R P
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP-DVY 611
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
TY+ +I+ + + FD+M ++ ++ ++ + LI + +G + +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
+ I+ N+ Y +++ + + E + +F+ M+ P+ YT +I+ Y K G
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 466 DKIYYLEQE 474
K+ L +E
Sbjct: 732 VKVECLLRE 740
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 143/364 (39%), Gaps = 24/364 (6%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
L+ + ++ + E FD++ + P + I K G+ A +LF+ M E G
Sbjct: 233 LTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P+ T+ ++ DEAF +M + +P + TYS L+K A +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM-EPTLITYSILVKGLTRAKRIGDA 349
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ ++M + PN + N ++ + +AG ++ ++ ++ S T NT+I
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 408
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ GQ D E+ ++ + G +F +I M+D + M
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 343 TTSTYNNVIEAFTDVGD-AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+I G +K +E F Q +G D++T L++G AG
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWF-QFLNKGFVVDTRTSNALLHGLCEAG-------- 519
Query: 402 VQLAEKFEIAE---------NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
+L E F I + + YN ++S C + L E M PD+ TY
Sbjct: 520 -KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 453 TIMI 456
+I+I
Sbjct: 579 SILI 582
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 170/434 (39%), Gaps = 86/434 (19%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+ P Y LI ++G ++A ++ M+ +G + TY L+ YC++ D A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP----------- 236
+L EM + + +++++I FD +M R++ P
Sbjct: 421 RLLKEMLSIGF-NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 237 ------------------------NTVTQNIVLSGYGKAGKFDQ--------------ME 258
+T T N +L G +AGK D+ M+
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 259 KVLSSMLESTSC--------------------KPDVWTMNTIISVFGNMGQIDMMEKWYE 298
+V + L S C KPD +T + +I NM +++ ++++
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 299 KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
+ G+ P+ T++++I K ++ + M T YN++I A+ G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE------KFEIAE 412
+ M+ +G+ +S T+ LI G + +IS V+ A+ + E E
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMS-------IISRVEEAKLLFEEMRMEGLE 712
Query: 413 NTTF-YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
F Y A++ K ++++E + + M P+ TYT+MI Y ++G + L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 472 --EQEKKTMITDGI 483
E +K ++ D I
Sbjct: 773 LNEMREKGIVPDSI 786
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 20/332 (6%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL+ F + + + +Y LI LL + AR + +I P
Sbjct: 109 ALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLP------- 161
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTY---STLIKPCVDAFKFDLVEL---LYED 228
L D +I + M + LC + LI+ FK D L ++
Sbjct: 162 -----CGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPV 216
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+A + + P+ T NI+L+ +A +F + + + + S PDV+ T I+ F G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGG 274
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
+++ K + K G+ P TFN +I G YD+ E M + T TY+
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+++ T + + +M +G + + LI+ F AG +K I L
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
++ ++ YN ++ K ER+ K M
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
ALE+ + +K H P TY LI + + A+ LF M EG +P+ YTAL+
Sbjct: 664 ALELREDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
Y + + + +L EM + + P+ TY+ +I L +M + I
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNV-HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 235 MPNTVTQNIVLSGYGKAG 252
+P+++T + GY K G
Sbjct: 782 VPDSITYKEFIYGYLKQG 799
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 12/339 (3%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P G LI L K G+ +A +L+ + +G T ALL C + LDEAF I
Sbjct: 468 PGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRI 527
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
E+ C D +Y+TLI C K D + ++M R + P+ T +I++ G
Sbjct: 528 QKEILGRG-CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG-- 584
Query: 250 KAGKFDQMEKVLSSMLESTSCK-----PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 304
M KV ++ CK PDV+T + +I + + ++++++ +
Sbjct: 585 ----LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKN 640
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
++P T +N LI AY + + E M+ ++TY ++I+ + + + +
Sbjct: 641 VQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAK 700
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
F++MR EG++ + + LI+G+ G KV ++ + N Y ++
Sbjct: 701 LLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGY 760
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ ++ E R+ M++ PD TY I Y K+G
Sbjct: 761 ARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 799
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 154/387 (39%), Gaps = 42/387 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+++F ++E P T+ +I LG G+ A M+E G +P+ TY+ L
Sbjct: 278 EAVKLFSKMEEAGV-APNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSIL 336
Query: 174 LAAYCRSNLLDEAFSILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
+ R+ + +A+ +L EM K P P+V Y+ LI ++A + + + M +
Sbjct: 337 VKGLTRAKRIGDAYFVLKEMTKKGFP---PNVIVYNNLIDSFIEAGSLNKAIEIKDLMVS 393
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLE-----------STSC---------- 270
+ + + T N ++ GY K G+ D E++L ML S C
Sbjct: 394 KGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDS 453
Query: 271 -------------KPDVWTMNTIISVFGNMGQ-IDMMEKWYEKFRNFGIEPETRTFNILI 316
P + T+IS G+ +E W++ F N G +TRT N L+
Sbjct: 454 ALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQ-FLNKGFVVDTRTSNALL 512
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
+ D+ + + + +YN +I D+M G+K
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLK 572
Query: 377 ADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
D+ T+ LI G N + I ++ + + Y+ ++ C KAE E +
Sbjct: 573 PDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEF 632
Query: 437 FKRMKDNQCPPDDTTYTIMIEAYRKEG 463
F M P+ Y +I AY + G
Sbjct: 633 FDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 160/369 (43%), Gaps = 5/369 (1%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
IE +A+E+ D++ TY LI K+GQ A +L M+ G + +
Sbjct: 376 IEAGSLNKAIEIKDLMVSKGL-SLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
++T+++ C + D A + EM + P +TLI K L+
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNM-SPGGGLLTTLISGLCKHGKHSKALELW 493
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ + +T T N +L G +AGK D+ ++ +L C D + NT+IS
Sbjct: 494 FQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEIL-GRGCVMDRVSYNTLISGCCG 552
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
++D + ++ G++P+ T++ILI G + ++ + + + R P
Sbjct: 553 KKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLP-DVY 611
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
TY+ +I+ + + FD+M ++ ++ ++ + LI + +G + +
Sbjct: 612 TYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDM 671
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
+ I+ N+ Y +++ + + E + +F+ M+ P+ YT +I+ Y K G
Sbjct: 672 KHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQM 731
Query: 466 DKIYYLEQE 474
K+ L +E
Sbjct: 732 VKVECLLRE 740
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 143/364 (39%), Gaps = 24/364 (6%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
L+ + ++ + E FD++ + P + I K G+ A +LF+ M E G
Sbjct: 233 LTSLVRANEFQKCCEAFDVVCKG--VSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAG 290
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P+ T+ ++ DEAF +M + +P + TYS L+K A +
Sbjct: 291 VAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGM-EPTLITYSILVKGLTRAKRIGDA 349
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ ++M + PN + N ++ + +AG ++ ++ ++ S T NT+I
Sbjct: 350 YFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNTLIK 408
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ GQ D E+ ++ + G +F +I M+D + M
Sbjct: 409 GYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSP 468
Query: 343 TTSTYNNVIEAFTDVGD-AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+I G +K +E F Q +G D++T L++G AG
Sbjct: 469 GGGLLTTLISGLCKHGKHSKALELWF-QFLNKGFVVDTRTSNALLHGLCEAG-------- 519
Query: 402 VQLAEKFEIAE---------NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
+L E F I + + YN ++S C + L E M PD+ TY
Sbjct: 520 -KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 453 TIMI 456
+I+I
Sbjct: 579 SILI 582
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 89/434 (20%), Positives = 170/434 (39%), Gaps = 86/434 (19%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+ P Y LI ++G ++A ++ M+ +G + TY L+ YC++ D A
Sbjct: 361 FPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAE 420
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP----------- 236
+L EM + + +++++I FD +M R++ P
Sbjct: 421 RLLKEMLSIGF-NVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISG 479
Query: 237 ------------------------NTVTQNIVLSGYGKAGKFDQ--------------ME 258
+T T N +L G +AGK D+ M+
Sbjct: 480 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 539
Query: 259 KVLSSMLESTSC--------------------KPDVWTMNTIISVFGNMGQIDMMEKWYE 298
+V + L S C KPD +T + +I NM +++ ++++
Sbjct: 540 RVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWD 599
Query: 299 KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
+ G+ P+ T++++I K ++ + M T YN++I A+ G
Sbjct: 600 DCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSG 659
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE------KFEIAE 412
+ M+ +G+ +S T+ LI G + +IS V+ A+ + E E
Sbjct: 660 RLSMALELREDMKHKGISPNSATYTSLIKGMS-------IISRVEEAKLLFEEMRMEGLE 712
Query: 413 NTTF-YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
F Y A++ K ++++E + + M P+ TYT+MI Y ++G + L
Sbjct: 713 PNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRL 772
Query: 472 --EQEKKTMITDGI 483
E +K ++ D I
Sbjct: 773 LNEMREKGIVPDSI 786
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/332 (22%), Positives = 130/332 (39%), Gaps = 20/332 (6%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL+ F + + + +Y LI LL + AR + +I P
Sbjct: 109 ALDFFRLASDSFSFSFSLRSYCLLIGLLLDANLLSAARVVLIRLINGNVPVLP------- 161
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTY---STLIKPCVDAFKFDLVEL---LYED 228
L D +I + M + LC + LI+ FK D L ++
Sbjct: 162 -----CGLRDSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPV 216
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+A + + P+ T NI+L+ +A +F + + + + S PDV+ T I+ F G
Sbjct: 217 LANKGMFPSKTTCNILLTSLVRANEFQKCCEAFDVVCKGVS--PDVYLFTTAINAFCKGG 274
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
+++ K + K G+ P TFN +I G YD+ E M + T TY+
Sbjct: 275 KVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYS 334
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+++ T + + +M +G + + LI+ F AG +K I L
Sbjct: 335 ILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSK 394
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
++ ++ YN ++ K ER+ K M
Sbjct: 395 GLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 2/138 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
ALE+ + +K H P TY LI + + A+ LF M EG +P+ YTAL+
Sbjct: 664 ALELREDMK-HKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALI 722
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
Y + + + +L EM + + P+ TY+ +I L +M + I
Sbjct: 723 DGYGKLGQMVKVECLLREMHSKNV-HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGI 781
Query: 235 MPNTVTQNIVLSGYGKAG 252
+P+++T + GY K G
Sbjct: 782 VPDSITYKEFIYGYLKQG 799
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 163/371 (43%), Gaps = 29/371 (7%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY L+ KS + AR+L M EGC+P+ Y AL+ C+ LDEA +
Sbjct: 637 PNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 696
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
EM H ++TYS+LI + DL + M S PN V ++ G
Sbjct: 697 KTEMSEHGF-PATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
K GK D+ K++ M+E C+P+V T +I FG +G+I+ + E+ + G+ P
Sbjct: 756 KVGKTDEAYKLM-QMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNY 814
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT--- 366
T+ +LI K D ++E M++ +P T+ Y VIE F N E+
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF-------NKEFIESL 867
Query: 367 --FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE--IAENTTFYNAVLS 422
D++ + + LI+ A + ++ F + + ++ YN+++
Sbjct: 868 GLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIE 927
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA-YRKEGMNDKIYYLE--------- 472
+ A + ++F M P+ ++ +I+ +R +++ + L+
Sbjct: 928 SLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQW 987
Query: 473 -QEKKTMITDG 482
+EKKT +DG
Sbjct: 988 IEEKKT--SDG 996
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 152/359 (42%), Gaps = 29/359 (8%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY ++ K+G +AR+ F M E GC P+ TYTAL+ AY ++ + A + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA----------------RSIMPN 237
+ C P++ TYS LI A + + ++E M S PN
Sbjct: 580 LSEG-CLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPN 638
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWY 297
VT +L G+ K+ + ++ K+L +M C+P+ + +I +G++D ++
Sbjct: 639 VVTYGALLDGFCKSHRVEEARKLLDAM-SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
+ G T++ LI Y K + D S V+ M + Y +I+ V
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE---IAENT 414
G M +G + + T+ +I+GF G+ K+ + ++L E+ +A N
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGF---GMIGKIETCLELLERMGSKGVAPNY 814
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE-----GMNDKI 468
Y ++ C K L + + MK P Y +IE + KE G+ D+I
Sbjct: 815 VTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 142/325 (43%), Gaps = 14/325 (4%)
Query: 152 RQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIK 211
R+ T + E P YT L++ C ++L +EA LN M+ C P+V TYSTL+
Sbjct: 287 REALTLVETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATS-CLPNVVTYSTLLC 345
Query: 212 PCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCK 271
C++ + + + M P+ N ++ Y +G K+L M++
Sbjct: 346 GCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-M 404
Query: 272 PDVWTMNTII-SVFG-----NMGQIDMMEKWYEKFRNFGI---EPETRTFNILIGAYGKK 322
P N +I S+ G N +D+ EK Y + G+ + +F + + GK
Sbjct: 405 PGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGK- 463
Query: 323 RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
Y+K +V+ M F TSTY+ V+ + + F++M+ G+ AD T+
Sbjct: 464 --YEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTY 521
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
+++ F AGL + + N Y A++ A KA+ + +F+ M
Sbjct: 522 TIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLS 581
Query: 443 NQCPPDDTTYTIMIEAYRKEGMNDK 467
C P+ TY+ +I+ + K G +K
Sbjct: 582 EGCLPNIVTYSALIDGHCKAGQVEK 606
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 171/409 (41%), Gaps = 39/409 (9%)
Query: 100 TEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMI 159
T+ +S E + +A++ + ++ S P TY L+ Q R +++ M+
Sbjct: 306 TKLISGLCEASLFEEAMDFLNRMRATSCL-PNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 160 EEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK--NHPLCQPDVFTYSTLI------K 211
EGC PSP+ + +L+ AYC S A+ +L +M H P Y+ LI K
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH---MPGYVVYNILIGSICGDK 421
Query: 212 PCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCK 271
++ DL E Y +M A ++ N + + AGK+++ V+ M+
Sbjct: 422 DSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI-GQGFI 480
Query: 272 PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV 331
PD T + +++ N ++++ +E+ + G+ + T+ I++ ++ K + ++
Sbjct: 481 PDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKW 540
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
MR++ TY +I A+ F+ M +EG + T+ LI+G
Sbjct: 541 FNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCK 600
Query: 392 AGLFHKVISTVQLAEKFEIAE-------------------NTTFYNAVLSACTKAEDLME 432
AG +V Q+ E+ ++ N Y A+L K+ + E
Sbjct: 601 AG---QVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEE 657
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITD 481
++ M C P+ Y +I+ K G D+ QE KT +++
Sbjct: 658 ARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDE----AQEVKTEMSE 702
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 100/232 (43%), Gaps = 9/232 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A ++ M++E +P TY +I G G+ +L M +G P+ TY L
Sbjct: 762 EAYKLMQMMEEKGC-QPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVL 820
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL--LYEDMAA 231
+ C++ LD A ++L EMK Q T++ + ++ F + +E L +++
Sbjct: 821 IDHCCKNGALDVAHNLLEEMK-----QTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQ 875
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV-WTMNTIISVFGNMGQI 290
P +++ KA + + ++L + ++ D T N++I ++
Sbjct: 876 DDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKV 935
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ + + + G+ PE ++F LI + + +++++ ++ W
Sbjct: 936 ETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLDFISHMEIQW 987
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 156/341 (45%), Gaps = 2/341 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+Y LI LL KS A +++ MI EG PS +TY++L+ + +D +L EM
Sbjct: 190 SYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM 249
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ L +P+V+T++ I+ A K + + + M P+ VT +++ A K
Sbjct: 250 ETLGL-KPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
D ++V M ++ KPD T T++ F + +D +++++ + G P+ TF
Sbjct: 309 LDCAKEVFEKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFT 367
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
IL+ A K + + ++ MR TYN +I V + F M +
Sbjct: 368 ILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESL 427
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
G+K + T+ I+ + +G + T + + IA N NA L + KA E
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
+++F +KD PD TY +M++ Y K G D+ L E
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSE 528
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 156/350 (44%), Gaps = 8/350 (2%)
Query: 118 VFDMLKEHSFY--EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLA 175
V +LKE +P T+ I +LG++G+ + A ++ M +EGC P TYT L+
Sbjct: 242 VMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLID 301
Query: 176 AYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
A C + LD A + +MK +PD TY TL+ D D V+ + +M +
Sbjct: 302 ALCTARKLDCAKEVFEKMKTGRH-KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
P+ VT I++ KAG F + L M + P++ T NT+I + ++D +
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQ-GILPNLHTYNTLICGLLRVHRLDDALE 419
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV--MEYMRKLQFPWTTSTYNNVIEA 353
+ + G++P T+ + I YGK D +S + E M+ N + +
Sbjct: 420 LFGNMESLGVKPTAYTYIVFIDYYGKSG--DSVSALETFEKMKTKGIAPNIVACNASLYS 477
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
G + + F ++ G+ DS T+ ++ ++ G + I + + +
Sbjct: 478 LAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPD 537
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
N++++ KA+ + E ++F RMK+ + P TY ++ K G
Sbjct: 538 VIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNG 587
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 124/254 (48%), Gaps = 5/254 (1%)
Query: 97 NTVTEDL--SERIEKKQWLQALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQ 153
NT+T ++ S ++ AL+++ D++ + F P TY LI L KSG+ + A+Q
Sbjct: 854 NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDF-SPTACTYGPLIDGLSKSGRLYEAKQ 912
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
LF M++ GC P+ Y L+ + ++ D A ++ M + +PD+ TYS L+
Sbjct: 913 LFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGV-RPDLKTYSVLVDCL 971
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
+ D ++++ + P+ V N++++G GK+ + ++ + + M S PD
Sbjct: 972 CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
++T N++I G G ++ K Y + + G+EP TFN LI Y + V +
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091
Query: 334 YMRKLQFPWTTSTY 347
M F T TY
Sbjct: 1092 TMVTGGFSPNTGTY 1105
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 148/337 (43%), Gaps = 12/337 (3%)
Query: 151 ARQLFTTMIEE-GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTL 209
AR LF ++ G P TY L+ +++++ A + ++K+ C PDV TY+ L
Sbjct: 768 ARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTG-CIPDVATYNFL 826
Query: 210 IKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
+ + K D + LY++M+ NT+T NIV+SG KAG D + ++
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886
Query: 270 CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 329
P T +I G++ ++ +E ++G P +NILI +GK D
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 330 TVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
+ + M K TY+ +++ VG + F +++ G+ D + +ING
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGL 1006
Query: 390 ANAGLFHKVISTVQLAEKFEIAENTT----FYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
+ H++ + L + + + T YN+++ A + E +++ ++
Sbjct: 1007 GKS---HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGL 1063
Query: 446 PPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDG 482
P+ T+ +I Y G + Y + Q TM+T G
Sbjct: 1064 EPNVFTFNALIRGYSLSGKPEHAYAVYQ---TMVTGG 1097
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 132/302 (43%), Gaps = 39/302 (12%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+PK TY LI L ++ A+ +F + GC P TY LL AY +S +DE F
Sbjct: 782 QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE 841
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD-LVELLYEDMAARSI------------- 234
+ EM H C+ + T++ +I V A D ++L Y+ M+ R
Sbjct: 842 LYKEMSTHE-CEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 235 ----------------------MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
PN NI+++G+GKAG+ D + M++ +P
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKE-GVRP 959
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTV 331
D+ T + ++ +G++D ++++ + G+ P+ +N++I GK R+ + +
Sbjct: 960 DLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
E TYN++I G + +++++ G++ + TF LI G++
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 392 AG 393
+G
Sbjct: 1080 SG 1081
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 114/259 (44%), Gaps = 4/259 (1%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
+Y M P+ T + ++ G GK D + +L M E+ KP+V+T I V
Sbjct: 210 VYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEM-ETLGLKPNVYTFTICIRVL 268
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
G G+I+ + ++ + G P+ T+ +LI A R D V E M+ +
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
TY +++ F+D D +++ + +M +G D TF L++ AG F + T+ +
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
I N YN ++ + L + +F M+ P TY + I+ Y K G
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSG- 447
Query: 465 NDKIYYLEQEKKTMITDGI 483
D + LE +K M T GI
Sbjct: 448 -DSVSALETFEK-MKTKGI 464
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 8/313 (2%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
C ++ C+ N + A ++ + QP + TY+ LI ++A ++
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIA 804
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ ++ + + +P+ T N +L YGK+GK D++ ++ M + C+ + T N +IS
Sbjct: 805 QDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM-STHECEANTITHNIVIS 863
Query: 283 VFGNMGQI-DMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRKLQF 340
G + D ++ +Y+ + P T+ LI K R+Y+ + E M
Sbjct: 864 GLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEA-KQLFEGMLDYGC 922
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
+ YN +I F G+A F +M EG++ D KT+ L++ G + +
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 401 TVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ-CPPDDTTYTIMIEAY 459
+ ++ + + YN +++ K+ L E +F MK ++ PD TY +I
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 460 RKEGMND---KIY 469
GM + KIY
Sbjct: 1043 GIAGMVEEAGKIY 1055
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 163/424 (38%), Gaps = 84/424 (19%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A EVF+ +K ++P TY+ L+ + +Q ++ M ++G P T+T L+
Sbjct: 312 AKEVFEKMKTGR-HKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILV 370
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD-LVELL-------- 225
A C++ EAF L+ M++ + P++ TY+TLI + + D +EL
Sbjct: 371 DALCKAGNFGEAFDTLDVMRDQGIL-PNLHTYNTLICGLLRVHRLDDALELFGNMESLGV 429
Query: 226 --------------------------YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
+E M + I PN V N L KAG+ D+ K
Sbjct: 430 KPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR-DREAK 488
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
+ L+ PD T N ++ + +G+ID K + G EP+ N LI
Sbjct: 489 QIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTL 548
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
K D+ + M++++ T TYN ++ G + F+ M +G ++
Sbjct: 549 YKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
TF NT F C E + ++ +FK
Sbjct: 609 ITF------------------------------NTLFD----CLCKNDEVTLALKMLFKM 634
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQEKK----------TMITDGIKVSQP 488
M D C PD TY +I K G + + + + Q KK T++ +K S
Sbjct: 635 M-DMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLPGVVKASLI 693
Query: 489 EDEF 492
ED +
Sbjct: 694 EDAY 697
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 97/251 (38%), Gaps = 3/251 (1%)
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
+++ T T N +L GK ++M V +++ K D T TI G +
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFD-LMQKRIIKRDTNTYLTIFKSLSVKGGLKQ 171
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
K R FG ++N LI K R + V M F + TY++++
Sbjct: 172 APYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMV 231
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
D ++ +M G+K + TF I AG ++ ++ +
Sbjct: 232 GLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 291
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI--YY 470
+ Y ++ A A L + VF++MK + PD TY +++ + D + ++
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351
Query: 471 LEQEKKTMITD 481
E EK + D
Sbjct: 352 SEMEKDGHVPD 362
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 6/350 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P Y +I LL + + A + F+ MI +G P YT L+ +C+ + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL--LYEDMAARSIMPNTVTQNIVLS 246
EM + + PDV TY+ +I D+VE L+ +M + + P++VT +++
Sbjct: 373 FFYEMHSRDI-TPDVLTYTAIISGFCQI--GDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 247 GYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
GY KAG +V + M+++ C P+V T T+I G +D + + G++
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P T+N ++ K ++ ++ T TY +++A+ G+ +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
+M +G++ TF L+NGF G+ + IA N T +N+++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+L ++K M PD TY +++ + K + ++L QE K
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 2/332 (0%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
+Y +I + + G+ A L M +G P +Y+ ++ YCR LD+ + ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 193 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
MK L +P+ + Y ++I K E + +M + I+P+TV ++ G+ K G
Sbjct: 307 MKRKGL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
K M S PDV T IIS F +G + K + + G+EP++ TF
Sbjct: 366 DIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
LI Y K V +M + TY +I+ GD + +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
G++ + T+ ++NG +G + + V E + +T Y ++ A K+ ++ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ + K M P T+ +++ + GM
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 2/261 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP T+ +LI K+G A ++ MI+ GC P+ TYT L+ C+ LD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+L+EM L QP++FTY++++ + + L + A + +TVT ++ Y
Sbjct: 478 LLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K+G+ D+ +++L ML +P + T N +++ F G ++ EK GI P
Sbjct: 537 CKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
TFN L+ Y + + + + M TY N+++ + K + F
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 369 QMRAEGMKADSKTFCCLINGF 389
+M+ +G T+ LI GF
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGF 676
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 14/339 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y LI K G A + F M P TYTA+++ +C+ + EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+EM L +PD T++ LI A ++ M PN VT ++ G
Sbjct: 409 FHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
K G D ++L M + +P+++T N+I++ G I+ K +F G+ +T
Sbjct: 468 KEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
T+ L+ AY K DK +++ M T T+N ++ F G ++ E +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 370 MRAEGMKADSKTF------CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
M A+G+ ++ TF C+ N A +K + + + + T+ N V
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-----PDGKTYENLVKGH 641
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
C KA ++ E +F+ MK +TY+++I+ + K
Sbjct: 642 C-KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 127/305 (41%), Gaps = 17/305 (5%)
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
P + LL EA + +M N+ L L + D +K +++
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ + N + NIV+ + G+ + +L ++E PDV + +T+++ +
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVNGYCR 293
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRKLQFPWTTS 345
G++D + K E + G++P + + +IG + ++ + E +R+ P T
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTV 352
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG-------LFHKV 398
Y +I+ F GD + F +M + + D T+ +I+GF G LFH++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ ++ + +++ KA + + RV M C P+ TYT +I+
Sbjct: 413 FCK-------GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 459 YRKEG 463
KEG
Sbjct: 466 LCKEG 470
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 154/350 (44%), Gaps = 6/350 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P Y +I LL + + A + F+ MI +G P YT L+ +C+ + A
Sbjct: 313 KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASK 372
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL--LYEDMAARSIMPNTVTQNIVLS 246
EM + + PDV TY+ +I D+VE L+ +M + + P++VT +++
Sbjct: 373 FFYEMHSRDI-TPDVLTYTAIISGFCQI--GDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429
Query: 247 GYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
GY KAG +V + M+++ C P+V T T+I G +D + + G++
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ 488
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P T+N ++ K ++ ++ T TY +++A+ G+ +
Sbjct: 489 PNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
+M +G++ TF L+NGF G+ + IA N T +N+++
Sbjct: 549 LKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCI 608
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+L ++K M PD TY +++ + K + ++L QE K
Sbjct: 609 RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMK 658
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 141/332 (42%), Gaps = 2/332 (0%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
+Y +I + + G+ A L M +G P +Y+ ++ YCR LD+ + ++
Sbjct: 247 ASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEV 306
Query: 193 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
MK L +P+ + Y ++I K E + +M + I+P+TV ++ G+ K G
Sbjct: 307 MKRKGL-KPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRG 365
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
K M S PDV T IIS F +G + K + + G+EP++ TF
Sbjct: 366 DIRAASKFFYEM-HSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTF 424
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
LI Y K V +M + TY +I+ GD + +M
Sbjct: 425 TELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWK 484
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
G++ + T+ ++NG +G + + V E + +T Y ++ A K+ ++ +
Sbjct: 485 IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ + K M P T+ +++ + GM
Sbjct: 545 AQEILKEMLGKGLQPTIVTFNVLMNGFCLHGM 576
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 121/261 (46%), Gaps = 2/261 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP T+ +LI K+G A ++ MI+ GC P+ TYT L+ C+ LD A
Sbjct: 418 EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANE 477
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+L+EM L QP++FTY++++ + + L + A + +TVT ++ Y
Sbjct: 478 LLHEMWKIGL-QPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K+G+ D+ +++L ML +P + T N +++ F G ++ EK GI P
Sbjct: 537 CKSGEMDKAQEILKEML-GKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
TFN L+ Y + + + + M TY N+++ + K + F
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655
Query: 369 QMRAEGMKADSKTFCCLINGF 389
+M+ +G T+ LI GF
Sbjct: 656 EMKGKGFSVSVSTYSVLIKGF 676
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 146/339 (43%), Gaps = 14/339 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y LI K G A + F M P TYTA+++ +C+ + EA +
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+EM L +PD T++ LI A ++ M PN VT ++ G
Sbjct: 409 FHEMFCKGL-EPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
K G D ++L M + +P+++T N+I++ G I+ K +F G+ +T
Sbjct: 468 KEGDLDSANELLHEMWK-IGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
T+ L+ AY K DK +++ M T T+N ++ F G ++ E +
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586
Query: 370 MRAEGMKADSKTF------CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
M A+G+ ++ TF C+ N A +K + + + + T+ N V
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVG-----PDGKTYENLVKGH 641
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
C KA ++ E +F+ MK +TY+++I+ + K
Sbjct: 642 C-KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/305 (20%), Positives = 127/305 (41%), Gaps = 17/305 (5%)
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
P + LL EA + +M N+ L L + D +K +++
Sbjct: 175 PRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVF 234
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ + N + NIV+ + G+ + +L ++E PDV + +T+++ +
Sbjct: 235 REFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLL-LMELKGYTPDVISYSTVVNGYCR 293
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRKLQFPWTTS 345
G++D + K E + G++P + + +IG + ++ + E +R+ P T
Sbjct: 294 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP-DTV 352
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG-------LFHKV 398
Y +I+ F GD + F +M + + D T+ +I+GF G LFH++
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ ++ + +++ KA + + RV M C P+ TYT +I+
Sbjct: 413 FCK-------GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDG 465
Query: 459 YRKEG 463
KEG
Sbjct: 466 LCKEG 470
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 169/380 (44%), Gaps = 36/380 (9%)
Query: 112 WLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
+L+A+ +FD + E P T+ LI L G+ A L M+ +G TY
Sbjct: 207 FLEAVALFDQMVEIGL-TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMA 230
++ C+ A ++L++M+ + +PDV YS +I + C D D + L+ +M
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHI-KPDVVIYSAIIDRLCKDGHHSD-AQYLFSEML 323
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ I PN T N ++ G+ G++ +++L M+E PDV T N +IS G++
Sbjct: 324 EKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-EINPDVLTFNALISASVKEGKL 382
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGK-------KRMYDKMST------------- 330
EK ++ + I P+T T+N +I + K K M+D M++
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 331 --------VMEYMRKLQ---FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
M+ +R++ T+TYN +I F +V + + F +M + G+ D+
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDT 502
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
T L+ GF + + ++ + +I +T YN ++ K + E +F
Sbjct: 503 ITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCS 562
Query: 440 MKDNQCPPDDTTYTIMIEAY 459
+ + PD TY +MI +
Sbjct: 563 LPIHGVEPDVQTYNVMISGF 582
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 151/354 (42%), Gaps = 6/354 (1%)
Query: 124 EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
E + +P Y +I L K G A+ LF+ M+E+G P+ TY ++ +C
Sbjct: 288 EETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
+A +L +M + PDV T++ LI V K E L ++M R I P+TVT N
Sbjct: 348 SDAQRLLRDMIEREI-NPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
++ G+ K +FD + + M PDV T NTII V+ ++D + +
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLM-----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G+ T T+N LI + + + + + M T T N ++ F + +
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEA 521
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
F+ ++ + D+ + +I+G + + + YN ++S
Sbjct: 522 LELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISG 581
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
+ + +F +MKDN PD++TY +I K G DK L E ++
Sbjct: 582 FCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRS 635
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 122/280 (43%), Gaps = 7/280 (2%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
+S +++ + +A ++ D + + P TY +I K + A+ +F M
Sbjct: 373 ISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS-- 429
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P T+ ++ YCR+ +DE +L E+ L + TY+TLI + +
Sbjct: 430 --PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLV-ANTTTYNTLIHGFCEVDNLNAA 486
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ L+++M + + P+T+T NI+L G+ + K ++ + L +++ + D N II
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALE-LFEVIQMSKIDLDTVAYNIIIH 545
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
++D + G+EP+ +T+N++I + K + + M+
Sbjct: 546 GMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEP 605
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
STYN +I G+ +MR+ G D+ T
Sbjct: 606 DNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTI 645
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 103/242 (42%), Gaps = 7/242 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A +FD++ P T+ +I + ++ + QL + G + TY L+
Sbjct: 420 AKHMFDLMAS-----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+C + L+ A + EM +H +C PD T + L+ + K + L+E + I
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVC-PDTITCNILLYGFCENEKLEEALELFEVIQMSKI 533
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+TV NI++ G K K D+ + S L +PDV T N +IS F I
Sbjct: 534 DLDTVAYNIIIHGMCKGSKVDEAWDLFCS-LPIHGVEPDVQTYNVMISGFCGKSAISDAN 592
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ K ++ G EP+ T+N LI K DK ++ MR F T V +
Sbjct: 593 VLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLI 652
Query: 355 TD 356
TD
Sbjct: 653 TD 654
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 77/358 (21%), Positives = 142/358 (39%), Gaps = 25/358 (6%)
Query: 110 KQWLQALEVFD-MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
K A++ FD M++ FY + K+I + + +P A L+ M +
Sbjct: 85 KSLDDAIDFFDYMVRSRPFYTAVDCN--KVIGVFVRMNRPDVAISLYRKMEIRRIPLNIY 142
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
++ L+ +C + L + S ++ QPDV T++TL+ L ED
Sbjct: 143 SFNILIKCFCDCHKLSFSLSTFGKLTKLGF-QPDVVTFNTLLHG-----------LCLED 190
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+++ + L GY F + + M+E P V T NT+I+ G
Sbjct: 191 ---------RISEALALFGYMVETGFLEAVALFDQMVE-IGLTPVVITFNTLINGLCLEG 240
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
++ K G+ + T+ ++ K ++ M + Y+
Sbjct: 241 RVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYS 300
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+I+ G + +Y F +M +G+ + T+ C+I+GF + G + ++ +
Sbjct: 301 AIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER 360
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
EI + +NA++SA K L E E++ M PD TY MI + K D
Sbjct: 361 EINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFD 418
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 143/335 (42%), Gaps = 3/335 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY LI L K G+ A ++G P+ +Y L+ AYC+S D A
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+L +M C+PD+ TY LI V + D + + R + P+ N+++SG
Sbjct: 402 LLLQMAERG-CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K G+F + + S ML+ + PD + T+I F G D K + G++ +
Sbjct: 461 CKTGRFLPAKLLFSEMLDR-NILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVD 519
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
N +I + + M D+ M M + TY+ +I+ + D F
Sbjct: 520 VVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFR 579
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M K + T+ LINGF G F T + + ++ N Y ++ + K
Sbjct: 580 YMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKES 639
Query: 429 DLMEMERVF-KRMKDNQCPPDDTTYTIMIEAYRKE 462
+E + + M N+C P++ T+ +++ + K+
Sbjct: 640 STLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKK 674
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 147/371 (39%), Gaps = 42/371 (11%)
Query: 127 FYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEA 186
FY G Y KL G A +F + +G P+ ET+ ++ +C+ +
Sbjct: 242 FYNTIIGGYCKL-------GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVAS 294
Query: 187 FSILNEMKNHPL----------------------------------CQPDVFTYSTLIKP 212
+L+E+K L C+PDV TY+ LI
Sbjct: 295 DRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINR 354
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
K ++ ++ + + ++PN ++ ++ Y K+ ++D K+L M E CKP
Sbjct: 355 LCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAER-GCKP 413
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
D+ T +I G +D K + G+ P+ +N+L+ K + +
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
M Y +I+ F GD F +G+K D +I GF +
Sbjct: 474 SEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRS 533
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G+ + ++ + + + + Y+ ++ K +D+ ++F+ M+ N+C P+ TY
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTY 593
Query: 453 TIMIEAYRKEG 463
T +I + +G
Sbjct: 594 TSLINGFCCQG 604
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 161/377 (42%), Gaps = 15/377 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+E++D + E P L+ LL KS + AR+++ M + G + L
Sbjct: 152 KAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCIL 211
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ C ++ ++ E + C P++ Y+T+I + L+++++ +
Sbjct: 212 VKGMCNEGKVEVGRKLI-EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG-QIDM 292
MP T +++G+ K G F +++LS + E + VW +N II G ++D
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKER-GLRVSVWFLNNIIDAKYRHGYKVDP 329
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
E N +P+ T+NILI K+ + ++ K +Y +I+
Sbjct: 330 AESIGWIIAN-DCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQ 388
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST-VQLAEKFEIA 411
A+ + QM G K D T+ LI+G +G ++ V+L ++ ++
Sbjct: 389 AYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDR-GVS 447
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND---KI 468
+ YN ++S K + + +F M D PD Y +I+ + + G D K+
Sbjct: 448 PDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Query: 469 YYLEQEKKTMITDGIKV 485
+ L EK G+KV
Sbjct: 508 FSLSVEK------GVKV 518
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 117/279 (41%), Gaps = 17/279 (6%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y LI +SG AR++F+ +E+G + A++ +CRS +LDEA +
Sbjct: 483 PDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALAC 542
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+N M L PD FTYST+I V ++ M PN VT +++G+
Sbjct: 543 MNRMNEEHLV-PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTII-SVFGNMGQIDMMEKWYEKFRNFGIEPE 308
G F E+ M + P+V T T+I S+ ++ ++E P
Sbjct: 602 CQGDFKMAEETFKEM-QLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPN 660
Query: 309 TRTFNILIGAYGKK-----------RMYDKMSTVMEYMRKLQFP-WT--TSTYNNVIEAF 354
TFN L+ + KK + + S E+ +++ W+ + YN+ +
Sbjct: 661 EVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCL 720
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
G K D+M +G D +F +++GF G
Sbjct: 721 CVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVG 759
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/328 (21%), Positives = 138/328 (42%), Gaps = 14/328 (4%)
Query: 146 GQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFT 205
G+ R+L +GC P+ Y ++ YC+ ++ A+ + E+K P + T
Sbjct: 219 GKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGF-MPTLET 277
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNT-VTQNIVLSGYGKAGKFDQMEKVLSSM 264
+ T+I F + L ++ R + + NI+ + Y K D E +
Sbjct: 278 FGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI--GW 335
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
+ + CKPDV T N +I+ G+ ++ + ++ G+ P ++ LI AY K +
Sbjct: 336 IIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKE 395
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG---DAKNMEYTFDQMRAEGMKADSKT 381
YD S ++ M + TY +I G DA NM+ ++ G+ D+
Sbjct: 396 YDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV---KLIDRGVSPDAAI 452
Query: 382 FCCLINGFANAGLFHKVISTVQLAEKFE--IAENTTFYNAVLSACTKAEDLMEMERVFKR 439
+ L++G G F + + + +E + I + Y ++ ++ D E +VF
Sbjct: 453 YNMLMSGLCKTGRF--LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+ D + MI+ + + GM D+
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDE 538
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/302 (21%), Positives = 125/302 (41%), Gaps = 2/302 (0%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
E + +L AY S L +A I + + PDV ++L+ V + + +Y+
Sbjct: 135 EALSHVLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYD 194
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+M R + + I++ G GK + K++ C P++ NTII + +
Sbjct: 195 EMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRW-GKGCIPNIVFYNTIIGGYCKL 253
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G I+ +++ + G P TF +I + K+ + ++ +++ +
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
NN+I+A G + + + A K D T+ LIN G + + A K
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MND 466
+ N Y ++ A K+++ ++ +M + C PD TY I+I G M+D
Sbjct: 374 KGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDD 433
Query: 467 KI 468
+
Sbjct: 434 AV 435
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 111/251 (44%), Gaps = 20/251 (7%)
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
VL Y ++G + ++ ++E PDV N+++S+ ++ K Y++ +
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL-QFPWTTST------YNNVIEAFTD 356
G + + IL+ K M ++ +E RKL + W YN +I +
Sbjct: 200 GDSVDNYSTCILV-----KGMCNEGK--VEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCK 252
Query: 357 VGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE--IAENT 414
+GD +N F +++ +G +TF +INGF G F V S L+E E + +
Sbjct: 253 LGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDF--VASDRLLSEVKERGLRVSV 310
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND-KIYYL-E 472
F N ++ A + ++ + N C PD TY I+I KEG + + +L E
Sbjct: 311 WFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDE 370
Query: 473 QEKKTMITDGI 483
KK +I + +
Sbjct: 371 ASKKGLIPNNL 381
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 168/373 (45%), Gaps = 6/373 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ LE+F+ +K Y P Y LI L K + + A QLF M+ PS TY L
Sbjct: 197 KGLELFNRMKHDRIY-PSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTL 255
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ YC++ +++F + MK + +P + T++TL+K A + E + ++M
Sbjct: 256 IDGYCKAGNPEKSFKVRERMKADHI-EPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLG 314
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+P+ T +I+ GY K + V + ++S K + +T + +++ G+I+
Sbjct: 315 FVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS-GVKMNAYTCSILLNALCKEGKIEKA 373
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
E+ + G+ P +N +I Y +K +E M K YN +I
Sbjct: 374 EEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRR 433
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
F ++G+ +N E ++M+ +G+ +T+ LI G+ F K ++ E N
Sbjct: 434 FCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPN 493
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
Y +++ K L+E + V + M+D P Y ++I+ +G + + +
Sbjct: 494 VVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSK 553
Query: 474 EKKTMITDGIKVS 486
E M+ GI+++
Sbjct: 554 E---MLKKGIELN 563
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 8/338 (2%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
L+ L K G+ +A ++ + +G P+ Y ++ YCR L A + M+
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ +PD Y+ LI+ + + + E M + + P+ T NI++ GYG+ +FD+
Sbjct: 420 M-KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKC 478
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI- 316
+L M E P+V + T+I+ ++ + + G+ P+ R +N+LI
Sbjct: 479 FDILKEM-EDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLID 537
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
G K ++ D E ++K TYN +I+ + G E ++ +G+K
Sbjct: 538 GCCSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLK 596
Query: 377 ADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
D T+ LI+G+ AG + I+ + ++ I Y+ ++S CTK E + ER+
Sbjct: 597 PDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTK-EGIELTERL 655
Query: 437 FKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
F M PD Y ++ Y G +K + L+++
Sbjct: 656 FGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQ 690
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 158/356 (44%), Gaps = 10/356 (2%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P Y LI + G+ A + M +G PS ETY L+ Y R D+ F
Sbjct: 421 KPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFD 480
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
IL EM+++ P+V +Y TLI K +++ DM R + P N+++ G
Sbjct: 481 ILKEMEDNG-TMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
GK + + ML+ + ++ T NT+I G++ E + G++P+
Sbjct: 540 CSKGKIEDAFRFSKEMLKK-GIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPD 598
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+N LI YG + + E M++ T TY+ +I T G + E F
Sbjct: 599 VFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFG 657
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKA 427
+M +K D + +++ +A G K + Q+ EK I + T YN+++ K
Sbjct: 658 EM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEK-SIGLDKTTYNSLILGQLKV 713
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY--RKEGMNDKIYYLEQEKKTMITD 481
L E+ + M + P+ TY I+++ + K+ M+ ++Y E ++K + D
Sbjct: 714 GKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLD 769
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 158/409 (38%), Gaps = 39/409 (9%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+ A ++FD + P TY LI K+G P ++ ++ M + +PS T
Sbjct: 228 KRMNDAEQLFDEMLARRLL-PSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLIT 286
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
+ LL ++ ++++A ++L EMK+ PD FT+S L K + +YE
Sbjct: 287 FNTLLKGLFKAGMVEDAENVLKEMKDLGFV-PDAFTFSILFDGYSSNEKAEAALGVYETA 345
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS--------------------------- 262
+ N T +I+L+ K GK ++ E++L
Sbjct: 346 VDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405
Query: 263 -------SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL 315
+E KPD N +I F +G+++ EK K + G+ P T+NIL
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465
Query: 316 IGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
IG YG+K +DK +++ M +Y +I + M G+
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525
Query: 376 KADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMER 435
+ + LI+G + G + K I N YN ++ + L E E
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIK 484
+ + PD TY +I Y G + L +E K GIK
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK---RSGIK 631
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/376 (22%), Positives = 154/376 (40%), Gaps = 37/376 (9%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRS-----------NL 182
+Y+ L VLL +S A LF + EG PS ++ T LL ++ N+
Sbjct: 111 SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNI 170
Query: 183 LDEAF------------------------SILNEMKNHPLCQPDVFTYSTLIKPCVDAFK 218
L+ F + N MK H P VF Y+ LI +
Sbjct: 171 LESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMK-HDRIYPSVFIYNVLIDGLCKGKR 229
Query: 219 FDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMN 278
+ E L+++M AR ++P+ +T N ++ GY KAG ++ KV M ++ +P + T N
Sbjct: 230 MNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERM-KADHIEPSLITFN 288
Query: 279 TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
T++ G ++ E ++ ++ G P+ TF+IL Y + V E
Sbjct: 289 TLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDS 348
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
T + ++ A G + E + A+G+ + + +I+G+ G
Sbjct: 349 GVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGA 408
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
++ EK + + YN ++ + ++ E+ +MK P TY I+I
Sbjct: 409 RMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGG 468
Query: 459 YRKEGMNDKIYYLEQE 474
Y ++ DK + + +E
Sbjct: 469 YGRKYEFDKCFDILKE 484
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 104/241 (43%), Gaps = 10/241 (4%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY LI L +G+ A L + +G P TY +L++ Y + + ++ EM
Sbjct: 566 TYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEM 625
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
K + +P + TY LI C +L E L+ +M S+ P+ + N VL Y G
Sbjct: 626 KRSGI-KPTLKTYHLLISLCTKE-GIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGD 680
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ + M+E S D T N++I +G++ + ++ +EPE T+N
Sbjct: 681 MEKAFNLQKQMIEK-SIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYN 739
Query: 314 ILIGAYGKKRMYDKMSTVMEY--MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
I++ G + D MS + Y M++ F N ++ + +K E +M
Sbjct: 740 IIVK--GHCEVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMN 797
Query: 372 A 372
Sbjct: 798 G 798
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 136/325 (41%), Gaps = 2/325 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY ++ + SG A + MI GC P+ YT L+ + +++ +A +L EM
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
K + PD+F Y++LI A + D +M + PN T +SGY +A +
Sbjct: 479 KEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
F +K + M E P+ +I+ + G++ Y + GI + +T+
Sbjct: 538 FASADKYVKEMRE-CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYT 596
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
+L+ K D + MR +Y +I F+ +G+ + FD+M E
Sbjct: 597 VLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEE 656
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
G+ + + L+ GF +G K + + N Y ++ K+ DL E
Sbjct: 657 GLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEA 716
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEA 458
R+F MK PD YT +++
Sbjct: 717 FRLFDEMKLKGLVPDSFVYTTLVDG 741
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 143/359 (39%), Gaps = 35/359 (9%)
Query: 139 IVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPL 198
I ++ K G +A+ LF MI G P + Y +L+ YCR + + + +L EMK +
Sbjct: 354 ICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNI 413
Query: 199 ----------------------------------CQPDVFTYSTLIKPCVDAFKFDLVEL 224
C+P+V Y+TLIK + +F
Sbjct: 414 VISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMR 473
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
+ ++M + I P+ N ++ G KA + D+ L M+E+ KP+ +T IS +
Sbjct: 474 VLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN-GLKPNAFTYGAFISGY 532
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+ +K+ ++ R G+ P LI Y KK + + M
Sbjct: 533 IEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDA 592
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
TY ++ + E F +MR +G+ D ++ LINGF+ G K S
Sbjct: 593 KTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDE 652
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ + N YN +L ++ ++ + + + M P+ TY +I+ Y K G
Sbjct: 653 MVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSG 711
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 154/370 (41%), Gaps = 26/370 (7%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
++ ++ A+ V +KE P Y LI+ L K+ + AR M+E G P+
Sbjct: 463 LQNSRFGDAMRVLKEMKEQGI-APDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMK------NHPLCQPDVFTY---STLIKPCVDAF 217
TY A ++ Y ++ A + EM+ N LC + Y +I+ C
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS--- 578
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
Y M + I+ + T ++++G K K D E++ M PDV++
Sbjct: 579 -------AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREM-RGKGIAPDVFSY 630
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
+I+ F +G + +++ G+ P +N+L+G + + +K +++ M
Sbjct: 631 GVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSV 690
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
TY +I+ + GD FD+M+ +G+ DS + L++G +
Sbjct: 691 KGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVER 750
Query: 398 VISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ----CPPDDTTYT 453
I T+ K A +T +NA+++ K V R+ D P+D TY
Sbjct: 751 AI-TIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYN 809
Query: 454 IMIEAYRKEG 463
IMI+ KEG
Sbjct: 810 IMIDYLCKEG 819
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 141/337 (41%), Gaps = 14/337 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P +Y LI K G +A +F M+EEG P+ Y LL +CRS +++A +
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKEL 684
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
L+EM L P+ TY T+I + L+++M + ++P++ ++ G
Sbjct: 685 LDEMSVKGL-HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCC 743
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK-----FRNFG 304
+ ++ + + C N +I+ G+ ++ + + F FG
Sbjct: 744 RLNDVERAITIFGT--NKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG 801
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
+P T+NI+I K+ + + M+ T TY +++ + +G M
Sbjct: 802 -KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMF 860
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFY----NA 419
FD+ A G++ D + +IN F G+ K + V Q+ K + + A
Sbjct: 861 PVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRA 920
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+LS K ++ E+V + M Q PD T +I
Sbjct: 921 LLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/353 (21%), Positives = 150/353 (42%), Gaps = 17/353 (4%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K G+ A + +M+++G +TYT L+ +++ +D+A I EM+ + PDV
Sbjct: 569 KKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGI-APDV 627
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
F+Y LI ++++M + PN + N++L G+ ++G+ ++ +++L
Sbjct: 628 FSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDE 687
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M P+ T TII + G + + +++ + G+ P++ + L+ +
Sbjct: 688 M-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA--------KNMEYTFDQMRAEGM 375
++ T+ +K +T+ +N +I G + M+ +FD+
Sbjct: 747 DVERAITIFGTNKK-GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFG---- 801
Query: 376 KADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMER 435
K + T+ +I+ G + + Y ++L+ K EM
Sbjct: 802 KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFP 861
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE--KKTMITDGIKVS 486
VF PD Y+++I A+ KEGM K L + K + DG K+S
Sbjct: 862 VFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLS 914
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 144/370 (38%), Gaps = 39/370 (10%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P + TY LI L K + A+ L M G TY+ L+ + D A +
Sbjct: 275 PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGL 334
Query: 190 LNEMKNHP-----------LCQ-----------------------PDVFTYSTLIKP-CV 214
++EM +H +C P Y++LI+ C
Sbjct: 335 VHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCR 394
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
+ ELL E M R+I+ + T V+ G +G D ++ M+ S C+P+V
Sbjct: 395 EKNVRQGYELLVE-MKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIAS-GCRPNV 452
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN-ILIGAYGKKRMYDKMSTVME 333
T+I F + + ++ + GI P+ +N ++IG KRM + S ++E
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVE 512
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+ P TY I + + + + + +MR G+ + LIN + G
Sbjct: 513 MVENGLKP-NAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKG 571
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
+ S + I + Y +++ K + + + E +F+ M+ PD +Y
Sbjct: 572 KVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYG 631
Query: 454 IMIEAYRKEG 463
++I + K G
Sbjct: 632 VLINGFSKLG 641
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 117 EVFDMLKEHSF---YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
EV + L + SF +P + TY +I L K G A++LF M P+ TYT+L
Sbjct: 787 EVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSL 846
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L Y + E F + +E + +PD YS +I + +L + M A++
Sbjct: 847 LNGYDKMGRRAEMFPVFDEAIAAGI-EPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKN 905
Query: 234 IMPNTVTQNI-----VLSGYGKAGKFDQMEKVLSSML 265
+ + +I +LSG+ K G+ + EKV+ +M+
Sbjct: 906 AVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMV 942
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/385 (21%), Positives = 165/385 (42%), Gaps = 35/385 (9%)
Query: 112 WLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
W ++L + D + E + Y P Y ++ + ++ Q A LF M + P TY+
Sbjct: 135 WQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYS 194
Query: 172 ALLAAYCRSNLLDEAFSILNEMK-----------------NHPLCQ-------------- 200
L+ ++ + + D A S L +M+ + LC
Sbjct: 195 TLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRS 254
Query: 201 ---PDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
PD+ Y+++I A F LL ++M ++PNTV+ + +LS Y + KF +
Sbjct: 255 GITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEA 314
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
V + M E +C D+ T N +I V+G + + ++ + R IEP ++N ++
Sbjct: 315 LSVFAEMKE-VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILR 373
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
YG+ ++ + + M++ TYN +I+ + + + +M++ G++
Sbjct: 374 VYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEP 433
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
++ T+ +I+ + AG + + Q + + Y ++ A + + +R+
Sbjct: 434 NAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLL 493
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKE 462
+K P +T TI+ +A R E
Sbjct: 494 HELKLPDNIPRETAITILAKAGRTE 518
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 162/383 (42%), Gaps = 46/383 (12%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ +F LK S P Y +I + GK+ AR L M E G P+ +Y+ L
Sbjct: 243 KAISIFSRLK-RSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTL 301
Query: 174 LAAYCRSNLLDEAFSILNEMK--NHPL--------------------------------C 199
L+ Y ++ EA S+ EMK N L
Sbjct: 302 LSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDI 361
Query: 200 QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
+P+V +Y+T+++ +A F L+ M + I N VT N ++ YGK + ++
Sbjct: 362 EPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATN 421
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
++ M +S +P+ T +TIIS++G G++D ++K R+ G+E + + +I AY
Sbjct: 422 LVQEM-QSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLYQTMIVAY 480
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
+ + M + +L+ P I G + + F Q G D
Sbjct: 481 ERVGL---MGHAKRLLHELKLP-DNIPRETAITILAKAGRTEEATWVFRQAFESGEVKDI 536
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIA---ENTTFYNAVLSACTKAEDLMEMERV 436
F C+IN ++ + ++ +++ EK A ++ VL+A K + + + V
Sbjct: 537 SVFGCMINLYSRN---QRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTV 593
Query: 437 FKRMKDNQCPPDDTTYTIMIEAY 459
++ M++ C D + M+ Y
Sbjct: 594 YREMQEEGCVFPDEVHFQMLSLY 616
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 155/349 (44%), Gaps = 37/349 (10%)
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
+++ R N + ++L+ + P VF Y+ +++ + A +FD+ L+++M R
Sbjct: 125 MVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQR 184
Query: 233 SIMPNTVTQNIVLSGYGKAGKFD-------QME-------------------------KV 260
++ P+ T + +++ +GK G FD +ME K
Sbjct: 185 ALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKA 244
Query: 261 LS--SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA 318
+S S L+ + PD+ N++I+V+G ++ G+ P T +++ L+
Sbjct: 245 ISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSV 304
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
Y + + + +V M+++ +T N +I+ + + K + F +R ++ +
Sbjct: 305 YVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPN 364
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
++ ++ + A LF + I +L ++ +I +N YN ++ K + + + +
Sbjct: 365 VVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQ 424
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQ 487
M+ P+ TY+ +I + K G D+ L Q+ + + G+++ Q
Sbjct: 425 EMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLR---SSGVEIDQ 470
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 125/261 (47%), Gaps = 9/261 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ +F +++ E TY +I + GK+ + +A L M G +P+ TY+ +
Sbjct: 383 EAIHLFRLMQRKDI-EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTI 441
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
++ + ++ LD A ++ ++++ + + D Y T+I + L ++
Sbjct: 442 ISIWGKAGKLDRAATLFQKLRSSGV-EIDQVLYQTMIVAYERVGLMGHAKRLLHELK--- 497
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG-NMGQIDM 292
+P+ + + ++ KAG+ ++ V ES K D+ +I+++ N +++
Sbjct: 498 -LPDNIPRETAITILAKAGRTEEATWVFRQAFESGEVK-DISVFGCMINLYSRNQRYVNV 555
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+E +EK R G P++ +++ AYGK+R ++K TV M++ + + ++
Sbjct: 556 IEV-FEKMRTAGYFPDSNVIAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQMLS 614
Query: 353 AFTDVGDAKNMEYTFDQMRAE 373
++ D + +E F ++ ++
Sbjct: 615 LYSSKKDFEMVESLFQRLESD 635
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 156/376 (41%), Gaps = 50/376 (13%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P E T+ ++ + G A ++ M+E GC S + ++ +C+ +++A +
Sbjct: 222 PDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNF 281
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+ EM N PD +T++TL+ A + + M P+ T N V+SG
Sbjct: 282 IQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLC 341
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID------------------ 291
K G+ + +VL M+ + C P+ T NT+IS Q++
Sbjct: 342 KLGEVKEAVEVLDQMI-TRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400
Query: 292 -----------------MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
+ + +E+ R+ G EP+ T+N+LI + K D+ +++
Sbjct: 401 CTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN--- 391
M + TYN +I+ F + E FD+M G+ +S T+ LI+G
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 392 ----AGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
A L ++I Q +K+ YN++L+ + D+ + + + M N C P
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYT-------YNSLLTHFCRGGDIKKAADIVQAMTSNGCEP 573
Query: 448 DDTTYTIMIEAYRKEG 463
D TY +I K G
Sbjct: 574 DIVTYGTLISGLCKAG 589
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 168/396 (42%), Gaps = 38/396 (9%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL +F++ + + P+ Y ++++ LG+SG +++ M C+ T+ L+
Sbjct: 66 ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+Y + L DE S+++ M + +PD Y+ ++ VD LVE+ + M+ I
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ T N+++ +A + +L M S PD T T++ + G +D
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDM-PSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ E+ FG + N+++ + K+ R+ D ++ + E + F T+N ++
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
G K+ D M EG D T+ +I+G G + + + + + N
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 414 TTFYNAVLSACTK---AEDLMEMERV--------------------------------FK 438
T YN ++S K E+ E+ RV F+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQ 473
M+ C PD+ TY ++I++ +G +++ + L+Q
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 150/380 (39%), Gaps = 39/380 (10%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
+M + F+ P + T+ L+ L K+G A ++ M++EG DP TY ++++ C+
Sbjct: 284 EMSNQDGFF-PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 180 SNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTV 239
+ EA +L++M C P+ TY+TLI + + L + ++ I+P+
Sbjct: 343 LGEVKEAVEVLDQMITRD-CSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 401
Query: 240 TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK 299
T N ++ G ++ M S C+PD +T N +I + G++D ++
Sbjct: 402 TFNSLIQGLCLTRNHRVAMELFEEM-RSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQ 460
Query: 300 FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
G T+N LI + K + + + M + TYN +I+
Sbjct: 461 MELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 520
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL--------------- 404
++ DQM EG K D T+ L+ F G K VQ
Sbjct: 521 VEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGT 580
Query: 405 -------AEKFEIAE-----------NTT--FYNAVLSACTKAEDLMEMERVFKRM-KDN 443
A + E+A N T YN V+ + E +F+ M + N
Sbjct: 581 LISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQN 640
Query: 444 QCPPDDTTYTIMIEAYRKEG 463
+ PPD +Y I+ G
Sbjct: 641 EAPPDAVSYRIVFRGLCNGG 660
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 143/326 (43%), Gaps = 8/326 (2%)
Query: 97 NTVTED--LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
NTVT + +S ++ Q +A E+ +L P T+ LI L + A +L
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGIL-PDVCTFNSLIQGLCLTRNHRVAMEL 422
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
F M +GC+P TY L+ + C LDEA ++L +M+ C V TY+TLI
Sbjct: 423 FEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSG-CARSVITYNTLIDGFC 481
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A K E ++++M + N+VT N ++ G K+ + + +++ M+ KPD
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQ-KPDK 540
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
+T N++++ F G I + + G EP+ T+ LI K + S ++
Sbjct: 541 YTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRS 600
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG-MKADSKTFCCLINGFANAG 393
++ T YN VI+ F +M + D+ ++ + G N G
Sbjct: 601 IQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGG 660
Query: 394 --LFHKVISTVQLAEKFEIAENTTFY 417
+ V V+L EK + E ++ Y
Sbjct: 661 GPIREAVDFLVELLEKGFVPEFSSLY 686
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 149/357 (41%), Gaps = 6/357 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P T+ LI L ++ Q A + M G P +T+T ++ Y LD A
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
I +M +V + C + D + + E P+ T N +++G
Sbjct: 246 IREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
KAG +++ ML+ PDV+T N++IS +G++ + ++ P
Sbjct: 306 CKAGHVKHAIEIMDVMLQE-GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T T+N LI K+ ++ + + + T+N++I+ + + F+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
+MR++G + D T+ LI+ + G + ++ ++ E A + YN ++ KA
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAY-RKEGMNDKIYYLEQEKKTMITDGIK 484
E E +F M+ + + TY +I+ + + D ++Q MI +G K
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQ----MIMEGQK 537
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 11/207 (5%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+FD ++ H TY LI L KS + A QL MI EG P TY +L
Sbjct: 488 EAEEIFDEMEVHGVSR-NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSL 546
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L +CR + +A I+ M ++ C+PD+ TY TLI A + ++ L + +
Sbjct: 547 LTHFCRGGDIKKAADIVQAMTSNG-CEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKG 605
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG----- 288
I N V+ G + K + + MLE PD + + N G
Sbjct: 606 INLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIRE 665
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNIL 315
+D + + EK G PE + +L
Sbjct: 666 AVDFLVELLEK----GFVPEFSSLYML 688
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/335 (22%), Positives = 148/335 (44%), Gaps = 2/335 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+EP T+ L+ + + A L ++ G +P+ Y ++ + C ++ A
Sbjct: 145 FEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTAL 204
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+L MK + +PDV TY++LI + + + + DM I P+ +T + ++
Sbjct: 205 DVLKHMKKMGI-RPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDV 263
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
YGK G+ + +K + M++ S P++ T N++I+ G +D +K + G P
Sbjct: 264 YGKEGQLLEAKKQYNEMIQR-SVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFP 322
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+N LI Y K + D ++ M + T TYN + + + G E
Sbjct: 323 NAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVL 382
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+M + G+ D TF L++G + G K + ++ +K + YN ++ KA
Sbjct: 383 GRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKA 442
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+ + + +F + PD TY M+ R++
Sbjct: 443 DKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 8/294 (2%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ + L E K Q AL+V +K+ P TY LI L SG + ++ +
Sbjct: 188 NTIIDSLCE---KGQVNTALDVLKHMKKMGI-RPDVVTYNSLITRLFHSGTWGVSARILS 243
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVD 215
M+ G P T++AL+ Y + L EA NEM + P++ TY++LI C+
Sbjct: 244 DMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV-NPNIVTYNSLINGLCIH 302
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
D + + + ++ PN VT N +++GY KA + D K+L M D +
Sbjct: 303 GL-LDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVM-SRDGVDGDTF 360
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
T NT+ + G+ EK + + G+ P+ TFNIL+ K +E +
Sbjct: 361 TYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDL 420
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
+K + TYN +I+ ++ Y F + +G+ D T+ ++ G
Sbjct: 421 QKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGL 474
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 160/386 (41%), Gaps = 8/386 (2%)
Query: 101 EDLSERIEKKQWLQALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMI 159
E L + ++ AL +F DM + H P + +L++ + K + LF +
Sbjct: 49 ERLRSGLHSIKFNDALTLFCDMAESHPL--PSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106
Query: 160 EEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKF 219
G ++T L+ +CR L A S L +M +P + T+ +L+ +F
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGF-EPSIVTFGSLVNGFCHVNRF 165
Query: 220 DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
L + + PN V N ++ + G+ + VL M + +PDV T N+
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHM-KKMGIRPDVVTYNS 224
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRKL 338
+I+ + G + + GI P+ TF+ LI YGK+ ++ + E +++
Sbjct: 225 LITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRS 284
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
P TYN++I G + + + ++G ++ T+ LING+ A
Sbjct: 285 VNP-NIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDG 343
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ + + + + +T YN + +A E+V RM PD T+ I+++
Sbjct: 344 MKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDG 403
Query: 459 YRKEG-MNDKIYYLEQEKKTMITDGI 483
G + + LE +K+ GI
Sbjct: 404 LCDHGKIGKALVRLEDLQKSKTVVGI 429
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/275 (20%), Positives = 112/275 (40%), Gaps = 7/275 (2%)
Query: 198 LCQPDVFT----YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+C F+ Y ++ + + KF+ L+ DMA +P+ V + +L K K
Sbjct: 35 ICNSRAFSGRSDYRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNK 94
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ + + LE D+++ T+I F ++ + K G EP TF
Sbjct: 95 YEAVISLFRH-LEMLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFG 153
Query: 314 ILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
L+ + R Y+ MS V + + L + YN +I++ + G M+
Sbjct: 154 SLVNGFCHVNRFYEAMSLV-DQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKK 212
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
G++ D T+ LI ++G + + + I+ + ++A++ K L+E
Sbjct: 213 MGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLE 272
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
++ + M P+ TY +I G+ D+
Sbjct: 273 AKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDE 307
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 173/381 (45%), Gaps = 11/381 (2%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T LS +++ + A ++FD ++ P T+ LI K+ A ++F
Sbjct: 173 VLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIF 232
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCV 214
M C+P TY ++ CR+ + A ++L+ M K P+V +Y+TL++
Sbjct: 233 KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYC 292
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES-TSCKPD 273
+ D L++ DM +R + PN VT N ++ G +A ++D+++ +L ++ T+ PD
Sbjct: 293 MKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPD 352
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
T N +I + G +D K +++ N + P++ ++++LI + +D+ T+
Sbjct: 353 ACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFN 412
Query: 334 -------YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLI 386
+ K + + YN + E G K E F Q+ G++ D ++ LI
Sbjct: 413 ELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLI 471
Query: 387 NGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK-AEDLMEMERVFKRMKDNQC 445
G G F + L + E + Y ++ K E L+ + + + ++ +
Sbjct: 472 TGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYL 531
Query: 446 PPDDTTYTIMIEAYRKEGMND 466
P T ++++ E +++ N+
Sbjct: 532 PVATTFHSVLAELAKRKFANE 552
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 147/341 (43%), Gaps = 15/341 (4%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
+ LI G +G + +LF TM + G PS T+ +LL+ + A + +EM+
Sbjct: 141 FNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMR 200
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
PD +T++TLI D +++DM P+ VT N ++ G +AGK
Sbjct: 201 RTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKV 260
Query: 255 DQMEKVLSSML-ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
VLS ML ++T P+V + T++ + +ID + + G++P T+N
Sbjct: 261 KIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYN 320
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKL--QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
LI + YD++ ++ F T+N +I+A D G F +M
Sbjct: 321 TLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 372 AEGMKADSKTFCCLI------NGFANA-GLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
+ DS ++ LI N F A LF+++ L K E YN +
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 425 TKAEDLMEMERVFKRM--KDNQCPPDDTTYTIMIEAYRKEG 463
+ E+VF+++ + Q PP +Y +I + +EG
Sbjct: 441 CANGKTKQAEKVFRQLMKRGVQDPP---SYKTLITGHCREG 478
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 83/191 (43%), Gaps = 8/191 (4%)
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
E+ N ++ + R FN LI +YG ++ + + + M+++ + T+N+++
Sbjct: 127 ERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSILLKR 186
Query: 358 GDAKNMEYTFDQMRAE-GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF 416
G FD+MR G+ DS TF LINGF + + + E + +
Sbjct: 187 GRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVT 246
Query: 417 YNAVLSACTKAEDLMEMERVFKRM--KDNQCPPDDTTYTIMIEAY-RKEGMNDKIYYLEQ 473
YN ++ +A + V M K P+ +YT ++ Y K+ +++ +
Sbjct: 247 YNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHD 306
Query: 474 EKKTMITDGIK 484
M++ G+K
Sbjct: 307 ----MLSRGLK 313
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 168/386 (43%), Gaps = 52/386 (13%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y LI L K + + A QL M GC P ET+ ++ C+ + ++EA +
Sbjct: 250 PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKM 309
Query: 190 LNEMK--------------NHPLCQ----------------PDVFTYSTLIKPCVDAFKF 219
+N M + LC+ P++ ++TLI V +
Sbjct: 310 VNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRL 369
Query: 220 DLVELLYEDMA-ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMN 278
D + + DM + I+P+ T N ++ GY K G +VL M + CKP+V++
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM-RNKGCKPNVYSYT 428
Query: 279 TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRK 337
++ F +G+ID + G++P T FN LI A+ K+ R+ + + E RK
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
P T+N++I +V + K+ + M +EG+ A++ T+ LIN F G
Sbjct: 489 GCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRG---- 543
Query: 398 VISTVQLAEKFEIAENTTF---------YNAVLSACTKAEDLMEMERVFKRMKDNQCPPD 448
++ E ++ F YN+++ +A ++ + +F++M + P
Sbjct: 544 -----EIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPS 598
Query: 449 DTTYTIMIEAYRKEGMNDKIYYLEQE 474
+ + I+I + GM ++ ++E
Sbjct: 599 NISCNILINGLCRSGMVEEAVEFQKE 624
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 140/314 (44%), Gaps = 42/314 (13%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
DM+ + P TY LI K G A ++ M +GC P+ +YT L+ +C+
Sbjct: 378 DMVTSYGIV-PDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436
Query: 180 SNLLDEAFSILNEM--------------------KNHPL--------------CQPDVFT 205
+DEA+++LNEM K H + C+PDV+T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
+++LI + + L DM + ++ NTVT N +++ + + G+ + K+++ M+
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
S D T N++I G++D +EK G P + NILI + M
Sbjct: 557 FQGS-PLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMV 615
Query: 326 DKMSTVMEYMRKLQFPWTT---STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
++ +E+ +++ +T T+N++I G ++ F +++AEG+ D+ TF
Sbjct: 616 EE---AVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTF 672
Query: 383 CCLINGFANAGLFH 396
L++ G +
Sbjct: 673 NTLMSWLCKGGFVY 686
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/371 (20%), Positives = 152/371 (40%), Gaps = 9/371 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
++E+F + Y Y LI LG +G+ +L M +EG + +++
Sbjct: 94 SMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIM 153
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
Y ++ + ++ EM+N C+P +Y+ +++ V + ++ DM +R I
Sbjct: 154 RDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKI 213
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P T +V+ + + D +L M + C P+ T+I +++
Sbjct: 214 PPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKH-GCVPNSVIYQTLIHSLSKCNRVNEAL 272
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ E+ G P+ TFN +I K ++ + ++ M F TY ++
Sbjct: 273 QLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGL 332
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-LAEKFEIAEN 413
+G + F ++ K + F LI+GF G + + + + I +
Sbjct: 333 CKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 388
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
YN+++ K + V M++ C P+ +YTI+++ + K G D+ Y +
Sbjct: 389 VCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLN 448
Query: 474 EKKTMITDGIK 484
E M DG+K
Sbjct: 449 E---MSADGLK 456
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 7/205 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+E+F + +P T+ LI L + + A L MI EG + TY L
Sbjct: 477 EAVEIFREMPRKG-CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535
Query: 174 LAAYCRSNLLDEAFSILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
+ A+ R + EA ++NEM + PL D TY++LIK A + D L+E M
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPL---DEITYNSLIKGLCRAGEVDKARSLFEKMLR 592
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
P+ ++ NI+++G ++G ++ + M+ S PD+ T N++I+ G+I+
Sbjct: 593 DGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGS-TPDIVTFNSLINGLCRAGRIE 651
Query: 292 MMEKWYEKFRNFGIEPETRTFNILI 316
+ K + GI P+T TFN L+
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLM 676
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 175/381 (45%), Gaps = 46/381 (12%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+W E+ + L+ +++ E ++ LI GK G + A ++ + + + G P+ +
Sbjct: 117 KKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 176
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE-- 227
YTAL+ +Y R + A +I M++ +P TY ++K V+ KF E ++E
Sbjct: 177 YTALMESYGRGGKCNNAEAIFRRMQSSG-PEPSAITYQIILKTFVEGDKFKEAEEVFETL 235
Query: 228 -DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
D + P+ ++++ Y KAG +++ KV SSM+ + V T N+++S +
Sbjct: 236 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV-TYNSLMSFETS 294
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
++ K Y++ + I+P+ ++ +LI AYG+ R ++ +V
Sbjct: 295 YKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSV--------------- 336
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
F++M G++ K + L++ FA +G+ + + +
Sbjct: 337 --------------------FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 376
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+ I + Y +LSA A D+ E+ FKR+K + P+ TY +I+ Y K ND
Sbjct: 377 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAK--AND 434
Query: 467 KIYYLEQEKKTMITDGIKVSQ 487
+E +K M GIK +Q
Sbjct: 435 VEKMMEVYEK-MRLSGIKANQ 454
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 22/337 (6%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEA--- 186
P +Y L+ G+ G+ + A +F M G +PS TY +L + + EA
Sbjct: 172 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 231
Query: 187 FSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLS 246
F L + K PL +PD Y +I A ++ ++ M + + +TVT N ++S
Sbjct: 232 FETLLDEKKSPL-KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 290
Query: 247 ---GYGKAGK-FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
Y + K +DQM++ + +PDV + +I +G + + +E+ +
Sbjct: 291 FETSYKEVSKIYDQMQR--------SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 342
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ-FP--WTTSTYNNVIEAFTDVGD 359
G+ P + +NIL+ A+ M ++ TV + MR+ + FP W +Y ++ A+ + D
Sbjct: 343 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLW---SYTTMLSAYVNASD 399
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
+ E F +++ +G + + T+ LI G+A A K++ + I N T
Sbjct: 400 MEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTT 459
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
++ A + ++ +K M+ PPD +++
Sbjct: 460 IMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 496
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 107 IEKKQWLQALEVFDML--KEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
+E ++ +A EVF+ L ++ S +P + Y +I + K+G +AR++F++M+ +G
Sbjct: 220 VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP 279
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
S TY +L++ E I ++M+ + QPDV +Y+ LIK A + +
Sbjct: 280 QSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDI-QPDVVSYALLIKAYGRARREEEALS 335
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
++E+M + P NI+L + +G +Q + V SM PD+W+ T++S +
Sbjct: 336 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAY 394
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
N ++ EK++++ + G EP T+ LI Y K +KM V E MR
Sbjct: 395 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 150/341 (43%), Gaps = 3/341 (0%)
Query: 117 EVFDML-KEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLA 175
+VFD+L + P G + L +L G A Q F+ M P + LL
Sbjct: 176 DVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLH 235
Query: 176 AYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
+ + D+ +M +P VFTY+ +I + L+E+M R ++
Sbjct: 236 RFAKLGKTDDVKRFFKDMIGAG-ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLV 294
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
P+TVT N ++ G+GK G+ D M + C+PDV T N +I+ F G++ + +
Sbjct: 295 PDTVTYNSMIDGFGKVGRLDDTVCFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLE 353
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
+Y + + G++P +++ L+ A+ K+ M + MR++ TY ++I+A
Sbjct: 354 FYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANC 413
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTT 415
+G+ + ++M G++ + T+ LI+G +A + + + N
Sbjct: 414 KIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLA 473
Query: 416 FYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
YNA++ KA+++ + +K PD Y I
Sbjct: 474 SYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 144/342 (42%), Gaps = 15/342 (4%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP TY LI K G+ + + M G P+ +Y+ L+ A+C+ ++ +A
Sbjct: 329 EPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIK 388
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKP------CVDAFKFDLVELLYEDMAARSIMPNTVTQN 242
+M+ L P+ +TY++LI DAF+ L +M + N VT
Sbjct: 389 FYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFR------LGNEMLQVGVEWNVVTYT 441
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
++ G A + + E++ M ++ P++ + N +I F +D + + +
Sbjct: 442 ALIDGLCDAERMKEAEELFGKM-DTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKG 500
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
GI+P+ + I + VM M++ + Y +++A+ G+
Sbjct: 501 RGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTE 560
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVL 421
+ D+M+ ++ TFC LI+G L K + +++ F + N + A++
Sbjct: 561 GLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMI 620
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
K + +F++M PD T YT +++ K+G
Sbjct: 621 DGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQG 662
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/271 (21%), Positives = 112/271 (41%), Gaps = 3/271 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY LI L + + A +LF M G P+ +Y AL+ + ++ +D A +LNE+
Sbjct: 439 TYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
K + +PD+ Y T I K + +++ +M I N++ ++ Y K+G
Sbjct: 499 KGRGI-KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGN 557
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN-FGIEPETRTF 312
+ +L M E + V T +I + ++ + N FG++ F
Sbjct: 558 PTEGLHLLDEMKE-LDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 616
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
+I K + +T+ E M + + Y ++++ G+ D+M
Sbjct: 617 TAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQ 403
GMK D + L+ G ++ K S ++
Sbjct: 677 IGMKLDLLAYTSLVWGLSHCNQLQKARSFLE 707
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 144/342 (42%), Gaps = 2/342 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY I L + G+ A ++ +IE+G P TY L+ C+++ EA
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
L +M N L +PD +TY+TLI L E + D +P+ T ++ G
Sbjct: 309 LGKMVNEGL-EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLC 367
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
G+ ++ + + L KP+V NT+I N G I + + G+ PE
Sbjct: 368 HEGETNRALALFNEAL-GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEV 426
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+TFNIL+ K +++ M + T+N +I ++ +N D
Sbjct: 427 QTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDV 486
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
M G+ D T+ L+NG F V+ T + + A N +N +L + +
Sbjct: 487 MLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRK 546
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
L E + + MK+ PD T+ +I+ + K G D Y L
Sbjct: 547 LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTL 588
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 40/372 (10%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY LI L K+ + A M+ EG +P TY L+A YC+ ++ A
Sbjct: 283 KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAER 342
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
I+ + + PD FTY +LI + + L+ + + I PN + N ++ G
Sbjct: 343 IVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
G + ++ + M E P+V T N +++ MG + + + + G P+
Sbjct: 402 SNQGMILEAAQLANEMSEK-GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPD 460
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA------FTDV----- 357
TFNILI Y + + +++ M TYN+++ F DV
Sbjct: 461 IFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYK 520
Query: 358 -----GDAKNMEYTFD--------------------QMRAEGMKADSKTFCCLINGFANA 392
G A N+ +TF+ +M+ + + D+ TF LI+GF
Sbjct: 521 TMVEKGCAPNL-FTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKN 579
Query: 393 GLFHKVISTVQ-LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
G + + + E ++++ +T YN ++ A T+ ++ E++F+ M D PD T
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYT 639
Query: 452 YTIMIEAYRKEG 463
Y +M++ + K G
Sbjct: 640 YRLMVDGFCKTG 651
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 159/364 (43%), Gaps = 10/364 (2%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
T+ KL+ +L K G +L +I+ G P+ TY + C+ LD A ++ +
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCL 277
Query: 194 -KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
+ P +PDV TY+ LI KF E+ M + P++ T N +++GY K G
Sbjct: 278 IEQGP--KPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
E+++ + + PD +T ++I + G+ + + + GI+P +
Sbjct: 336 MVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
N LI + M + + + M + T+N ++ +G + + M +
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
+G D TF LI+G++ + + + + + YN++L+ K +
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEA---YRKEGMNDKIYYLEQEK-KTMITDGIKVSQP 488
+ +K M + C P+ T+ I++E+ YRK +++ + LE+ K K++ D +
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRK--LDEALGLLEEMKNKSVNPDAVTFGTL 572
Query: 489 EDEF 492
D F
Sbjct: 573 IDGF 576
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 141/358 (39%), Gaps = 40/358 (11%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
+K ++ALE+F+ +++ ++ TY +I LG G+ ++ M E + E
Sbjct: 17 QKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLE 76
Query: 169 -TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
Y + Y R + EA ++ M + C+P VF+Y+ ++ VD+ FD +Y
Sbjct: 77 GVYVGAMKNYGRKGKVQEAVNVFERMDFYD-CEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M R I P+ + I + + K + ++L++M S C+ +V T++ F
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNM-SSQGCEMNVVAYCTVVGGF--- 191
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
+ E F+ G E +GK M ST+
Sbjct: 192 --------YEENFKAEGYE-----------LFGK-------------MLASGVSLCLSTF 219
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-LAE 406
N ++ GD K E D++ G+ + T+ I G G + V L E
Sbjct: 220 NKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIE 279
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ + T+ N + C K E E +M + PD TY +I Y K GM
Sbjct: 280 QGPKPDVITYNNLIYGLC-KNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/206 (20%), Positives = 86/206 (41%), Gaps = 37/206 (17%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGC---------- 163
ALE+ D++ ++ +P TY L+ L K+ + + + TM+E+GC
Sbjct: 479 NALEILDVMLDNGV-DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNIL 537
Query: 164 -------------------------DPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPL 198
+P T+ L+ +C++ LD A+++ +M+
Sbjct: 538 LESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYK 597
Query: 199 CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQME 258
TY+ +I + + E L+++M R + P+ T +++ G+ K G +
Sbjct: 598 VSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGY 657
Query: 259 KVLSSMLESTSCKPDVWTMNTIISVF 284
K L M+E+ P + T+ +I+
Sbjct: 658 KFLLEMMENGFI-PSLTTLGRVINCL 682
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 176/391 (45%), Gaps = 17/391 (4%)
Query: 102 DLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE 161
DLS ++ +Q+ A + D++K + E T+ LI ++G A F M +
Sbjct: 159 DLSGKV--RQFDLAWHLIDLMKSRNV-EISIETFTILIRRYVRAGLASEAVHCFNRMEDY 215
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
GC P ++ +++ R EA S + +K+ +PDV Y+ L++ A +
Sbjct: 216 GCVPDKIAFSIVISNLSRKRRASEAQSFFDSLKDR--FEPDVIVYTNLVRGWCRAGEISE 273
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
E ++++M I PN T +IV+ + G+ + V + ML+S C P+ T N ++
Sbjct: 274 AEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDS-GCAPNAITFNNLM 332
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
V G+ + + + Y + + G EP+T T+N LI A+ + + V+ M K +
Sbjct: 333 RVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCE 392
Query: 342 WTTSTYNNV---IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
ST+N + IE DV A M + +M + ++ T+ L+ F + V
Sbjct: 393 VNASTFNTIFRYIEKKRDVNGAHRM---YSKMMEAKCEPNTVTYNILMRMFVGSKSTDMV 449
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC-PPDDTTYTIMIE 457
+ + + E+ N Y +++ ++FK M + +C P + Y +++
Sbjct: 450 LKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLA 509
Query: 458 AYRKEGMNDKIYYLEQEKKTMITDGIKVSQP 488
R+ G K E+ + MI G+ V++P
Sbjct: 510 QLRRAGQLKK---HEELVEKMIQKGL-VARP 536
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 147/338 (43%), Gaps = 3/338 (0%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K G A+++F + + P+ ++ L+ YC+ LDE F + ++M+ +PDV
Sbjct: 252 KEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSR-TRPDV 310
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
FTYS LI K D L+++M R ++PN V ++ G+ + G+ D M++
Sbjct: 311 FTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQK 370
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
ML S +PD+ NT+++ F G + + G+ P+ T+ LI + +
Sbjct: 371 ML-SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGG 429
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+ + + M + ++ ++ G + E +M G+K D T+
Sbjct: 430 DVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYT 489
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
+++ F G ++ + + YN +L+ K + + + M +
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNI 549
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITD 481
PDD TY ++E + + + K Y+++ + ++ D
Sbjct: 550 GVVPDDITYNTLLEGHHRHANSSK-RYIQKPEIGIVAD 586
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 125/281 (44%), Gaps = 4/281 (1%)
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
+V+ ++ L+ + +++++ RS+ P V+ N +++GY K G D+ + L
Sbjct: 239 NVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFR-L 297
Query: 262 SSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK 321
+E + +PDV+T + +I+ ++D +++ G+ P F LI + +
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSR 357
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
D M + M YN ++ F GD D M G++ D T
Sbjct: 358 NGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKIT 417
Query: 382 FCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMK 441
+ LI+GF G + + ++ I + ++A++ K +++ ER + M
Sbjct: 418 YTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREML 477
Query: 442 DNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDG 482
PDD TYT+M++A+ K+G + L +E M +DG
Sbjct: 478 RAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKE---MQSDG 515
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 4/194 (2%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P Y L+ K+G AR + MI G P TYT L+ +CR ++ A
Sbjct: 377 QPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALE 436
Query: 189 ILNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
I EM + + + D +S L+ C + D L E + A I P+ VT +++
Sbjct: 437 IRKEMDQNGI-ELDRVGFSALVCGMCKEGRVIDAERALREMLRA-GIKPDDVTYTMMMDA 494
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K G K+L M +S P V T N +++ +GQ+ + + N G+ P
Sbjct: 495 FCKKGDAQTGFKLLKEM-QSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVP 553
Query: 308 ETRTFNILIGAYGK 321
+ T+N L+ + +
Sbjct: 554 DDITYNTLLEGHHR 567
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 175/381 (45%), Gaps = 46/381 (12%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+W E+ + L+ +++ E ++ LI GK G + A ++ + + + G P+ +
Sbjct: 124 KKWNLVSEILEWLRYQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVIS 183
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE-- 227
YTAL+ +Y R + A +I M++ +P TY ++K V+ KF E ++E
Sbjct: 184 YTALMESYGRGGKCNNAEAIFRRMQSSG-PEPSAITYQIILKTFVEGDKFKEAEEVFETL 242
Query: 228 -DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
D + P+ ++++ Y KAG +++ KV SSM+ + V T N+++S +
Sbjct: 243 LDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTV-TYNSLMSFETS 301
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
++ K Y++ + I+P+ ++ +LI AYG+ R ++ +V
Sbjct: 302 YKEVS---KIYDQMQRSDIQPDVVSYALLIKAYGRARREEEALSV--------------- 343
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
F++M G++ K + L++ FA +G+ + + +
Sbjct: 344 --------------------FEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMR 383
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+ I + Y +LSA A D+ E+ FKR+K + P+ TY +I+ Y K ND
Sbjct: 384 RDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKA--ND 441
Query: 467 KIYYLEQEKKTMITDGIKVSQ 487
+E +K M GIK +Q
Sbjct: 442 VEKMMEVYEK-MRLSGIKANQ 461
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 149/334 (44%), Gaps = 16/334 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEA--- 186
P +Y L+ G+ G+ + A +F M G +PS TY +L + + EA
Sbjct: 179 PNVISYTALMESYGRGGKCNNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEV 238
Query: 187 FSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLS 246
F L + K PL +PD Y +I A ++ ++ M + + +TVT N ++S
Sbjct: 239 FETLLDEKKSPL-KPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMS 297
Query: 247 ---GYGKAGK-FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
Y + K +DQM++ + +PDV + +I +G + + +E+ +
Sbjct: 298 FETSYKEVSKIYDQMQR--------SDIQPDVVSYALLIKAYGRARREEEALSVFEEMLD 349
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
G+ P + +NIL+ A+ M ++ TV + MR+ + +Y ++ A+ + D +
Sbjct: 350 AGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEG 409
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
E F +++ +G + + T+ LI G+A A K++ + I N T ++
Sbjct: 410 AEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMD 469
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
A + ++ +K M+ PPD +++
Sbjct: 470 ASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLL 503
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 119/232 (51%), Gaps = 7/232 (3%)
Query: 107 IEKKQWLQALEVFDML--KEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
+E ++ +A EVF+ L ++ S +P + Y +I + K+G +AR++F++M+ +G
Sbjct: 227 VEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVFSSMVGKGVP 286
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
S TY +L++ E I ++M+ + QPDV +Y+ LIK A + +
Sbjct: 287 QSTVTYNSLMSF---ETSYKEVSKIYDQMQRSDI-QPDVVSYALLIKAYGRARREEEALS 342
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
++E+M + P NI+L + +G +Q + V SM PD+W+ T++S +
Sbjct: 343 VFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWSYTTMLSAY 401
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
N ++ EK++++ + G EP T+ LI Y K +KM V E MR
Sbjct: 402 VNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/353 (26%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL +FD + Y+P Y +I L KS Q A L M ++G P TY +L+
Sbjct: 170 ALYMFDQMVGMG-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLI 228
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+ C S +A +++ M + PDVFT++ LI CV + E YE+M RS+
Sbjct: 229 SGLCSSGRWSDATRMVSCMTKREI-YPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ VT ++++ G + D+ E++ M+ S C PDV T + +I+ + +++
Sbjct: 288 DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV-SKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT---TSTYNNVI 351
K + + G+ T T+ ILI Y + K++ E R++ F TYN ++
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRA---GKLNVAEEIFRRMVFCGVHPNIITYNVLL 403
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
D G + M+ GM AD T+ +I G AG E+A
Sbjct: 404 HGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAG---------------EVA 448
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ Y ++ + LM PD TYT M+ K+G+
Sbjct: 449 DAWDIYCSL-----NCQGLM---------------PDIWTYTTMMLGLYKKGL 481
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/221 (27%), Positives = 102/221 (46%), Gaps = 3/221 (1%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T +S +W A + + + Y P T+ LI K G+ A + +
Sbjct: 221 VVTYNSLISGLCSSGRWSDATRMVSCMTKREIY-PDVFTFNALIDACVKEGRVSEAEEFY 279
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
MI DP TY+ L+ C + LDEA + M + C PDV TYS LI
Sbjct: 280 EEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKG-CFPDVVTYSILINGYCK 338
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
+ K + L+ +M+ R ++ NTVT I++ GY +AGK + E++ M+ P++
Sbjct: 339 SKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMV-FCGVHPNII 397
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
T N ++ + G+I+ + G++ + T+NI+I
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIII 438
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 104/238 (43%), Gaps = 4/238 (1%)
Query: 220 DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
D ++L + + R +P+ + +LS K K+D + + M + ++ T N
Sbjct: 64 DSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQM-QMLGIPHNLCTCNI 121
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK-KRMYDKMSTVMEYMRKL 338
+++ F Q+ + + K G EP TF L+ + + R+YD + + + M +
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL-YMFDQMVGM 180
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
+ YN +I+ N ++M +G+ D T+ LI+G ++G +
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDA 240
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
V K EI + +NA++ AC K + E E ++ M PD TY+++I
Sbjct: 241 TRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLI 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 3/194 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+F + + P TY LI KS + +LF M + G + TYT L
Sbjct: 309 EAEEMFGFMVSKGCF-PDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTIL 367
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ YCR+ L+ A I M + P++ TY+ L+ D K + ++ DM
Sbjct: 368 IQGYCRAGKLNVAEEIFRRMVFCGV-HPNIITYNVLLHGLCDNGKIEKALVILADMQKNG 426
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ + VT NI++ G KAG+ + S L PD+WT T++ G
Sbjct: 427 MDADIVTYNIIIRGMCKAGEVADAWDIYCS-LNCQGLMPDIWTYTTMMLGLYKKGLRREA 485
Query: 294 EKWYEKFRNFGIEP 307
+ + K + GI P
Sbjct: 486 DALFRKMKEDGILP 499
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 88/213 (41%), Gaps = 2/213 (0%)
Query: 253 KFDQMEKVLSSMLESTSCKP--DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
+F +++ L C+P + + ++S M + D++ +E+ + GI
Sbjct: 58 RFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLC 117
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
T NIL+ + + + + M KL + T+ +++ F + Y FDQM
Sbjct: 118 TCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQM 177
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
G K + + +I+G + + + EK I + YN+++S +
Sbjct: 178 VGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRW 237
Query: 431 MEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ R+ M + PD T+ +I+A KEG
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEG 270
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/336 (19%), Positives = 122/336 (36%), Gaps = 40/336 (11%)
Query: 183 LDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
LD++ + M + PL P + +S L+ K+D+V L+E M I N T
Sbjct: 62 LDDSLDLFFHMVQCRPL--PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTC 119
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLE----------------------------------S 267
NI+L+ + + + L M++
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
KP+V NTII Q+D + GI P+ T+N LI +
Sbjct: 180 MGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSD 239
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
+ ++ M K + T+N +I+A G E +++M + D T+ LI
Sbjct: 240 ATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
G + + Y+ +++ K++ + ++F M
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 448 DDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
+ TYTI+I+ Y + G K+ E+ + M+ G+
Sbjct: 360 NTVTYTILIQGYCRAG---KLNVAEEIFRRMVFCGV 392
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 148/338 (43%), Gaps = 4/338 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+EP T+ L+ + A LF ++ G P+ TYT L+ C++ L+ A
Sbjct: 149 FEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAV 208
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ N+M + +P+V TY+ L+ + ++ L DM R I PN +T ++
Sbjct: 209 ELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K GK + +++ + M++ S PDV+T ++I+ G +D + + G P
Sbjct: 268 FVKVGKLMEAKELYNVMIQ-MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 308 ETRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
+ LI + K KR+ D M E M + T TY +I+ + VG +
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYE-MSQKGVVANTITYTVLIQGYCLVGRPDVAQEV 385
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
F+QM + D +T+ L++G G K + + K E+ N Y ++ K
Sbjct: 386 FNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCK 445
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ + +F + P+ TYT MI + + G+
Sbjct: 446 LGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGL 483
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 143/339 (42%), Gaps = 5/339 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ +FD + F +P TY LI L K+ + A +LF M G P+ TY AL+
Sbjct: 172 AIALFDQILGMGF-KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALV 230
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C +A +L +M + +P+V T++ LI V K + LY M S+
Sbjct: 231 TGLCEIGRWGDAAWLLRDMMKRRI-EPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV 289
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI-DMM 293
P+ T +++G G D+ ++ ++E C P+ T+I F ++ D M
Sbjct: 290 YPDVFTYGSLINGLCMYGLLDEARQMFY-LMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ +YE + G+ T T+ +LI Y D V M + P TYN +++
Sbjct: 349 KIFYEMSQK-GVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDG 407
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
G + F+ MR M + T+ +I G G + N
Sbjct: 408 LCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPN 467
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
Y ++S + + E + +FK+MK++ P+++ Y
Sbjct: 468 VITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVY 506
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 135/302 (44%), Gaps = 3/302 (0%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T T + + + A+E+F+ + + P TY L+ L + G+ A L
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNG-SRPNVVTYNALVTGLCEIGRWGDAAWLL 246
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M++ +P+ T+TAL+ A+ + L EA + N M + PDVFTY +LI
Sbjct: 247 RDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSV-YPDVFTYGSLINGLCM 305
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
D ++ M PN V ++ G+ K+ + + K+ M +
Sbjct: 306 YGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEM-SQKGVVANTI 364
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
T +I + +G+ D+ ++ + + + P+ RT+N+L+ +K + EYM
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
RK + TY +I+ +G ++ F + ++GMK + T+ +I+GF GL
Sbjct: 425 RKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLI 484
Query: 396 HK 397
H+
Sbjct: 485 HE 486
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/307 (20%), Positives = 129/307 (42%), Gaps = 12/307 (3%)
Query: 183 LDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
++A + M + PL P + ++ L+ ++D+V L+E M I P T
Sbjct: 64 FNDALDLFTRMVHSRPL--PSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTC 121
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
NIV+ + + + L M++ +PD+ T ++++ + + +I+ +++
Sbjct: 122 NIVMHCVCLSSQPCRASCFLGKMMK-LGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQIL 180
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
G +P T+ LI K R + + M TYN ++ ++G
Sbjct: 181 GMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWG 240
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
+ + M ++ + TF LI+ F G + + + + + Y +++
Sbjct: 241 DAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLI 300
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK-----EGMNDKIYYLEQEKK 476
+ L E ++F M+ N C P++ YT +I + K +GM KI+Y E +K
Sbjct: 301 NGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM--KIFY-EMSQK 357
Query: 477 TMITDGI 483
++ + I
Sbjct: 358 GVVANTI 364
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/273 (19%), Positives = 103/273 (37%), Gaps = 4/273 (1%)
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
+Y +++ + +F+ L+ M +P+ + +LS K ++D + + M
Sbjct: 50 SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
+ P + T N ++ Q + K G EP+ TF L+ Y
Sbjct: 110 -QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
+ + + + + F TY +I + F+QM G + + T+
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
L+ G G + ++ K I N + A++ A K LME + ++ M
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288
Query: 445 CPPDDTTYTIMIEAYRKEGMND---KIYYLEQE 474
PD TY +I G+ D +++YL +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMER 321
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 141/337 (41%), Gaps = 8/337 (2%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y LI L K + H A LF M + G P+ TY+ L+ +CR LD A S
Sbjct: 365 PNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSF 424
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
L EM + L + V+ Y++LI E +M + + P VT ++ GY
Sbjct: 425 LGEMVDTGL-KLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYC 483
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
GK ++ ++ M P ++T T++S G I K + + + ++P
Sbjct: 484 SKGKINKALRLYHEM-TGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNR 542
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQ---FPWTTSTYNNVIEAFTDVGDAKNMEYT 366
T+N++I Y ++ MS E+++++ T +Y +I G A +
Sbjct: 543 VTYNVMIEGYCEE---GDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
D + + + + L++GF G + +S Q + + + Y ++ K
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+D + K M D PDD YT MI+A K G
Sbjct: 660 HKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 162/379 (42%), Gaps = 3/379 (0%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V T++ L ++ + + A+E+F+ + P Y +I L + RA+++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGI-RPDVYIYTGVIRSLCELKDLSRAKEMI 250
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M GCD + Y L+ C+ + EA I ++ L +PDV TY TL+
Sbjct: 251 AHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDL-KPDVVTYCTLVYGLCK 309
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
+F++ + ++M P+ + ++ G K GK ++ ++ +++ P+++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD-FGVSPNLF 368
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
N +I + E +++ G+ P T++ILI + ++ D + + M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
+ YN++I GD E +M + ++ T+ L+ G+ + G
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 396 HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+K + IA + + +LS +A + + ++F M + P+ TY +M
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 456 IEAYRKEGMNDKIYYLEQE 474
IE Y +EG K + +E
Sbjct: 549 IEGYCEEGDMSKAFEFLKE 567
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/357 (20%), Positives = 149/357 (41%), Gaps = 5/357 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY L+ L K + ++ M+ PS ++L+ + ++EA +
Sbjct: 294 KPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALN 353
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
++ + + + P++F Y+ LI KF ELL++ M + PN VT +I++ +
Sbjct: 354 LVKRVVDFGV-SPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMF 412
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
+ GK D L M++ T K V+ N++I+ G I E + + N +EP
Sbjct: 413 CRRGKLDTALSFLGEMVD-TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPT 471
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+ L+G Y K +K + M + T+ ++ G ++ F+
Sbjct: 472 VVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFN 531
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
+M +K + T+ +I G+ G K ++ + I +T Y ++
Sbjct: 532 EMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTG 591
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKV 485
E + + C ++ YT ++ + +EG ++ + QE M+ G+ +
Sbjct: 592 QASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQE---MVQRGVDL 645
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 147/356 (41%), Gaps = 7/356 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP TY L+ G+ ++A +L+ M +G PS T+T LL+ R+ L+ +A
Sbjct: 469 EPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVK 528
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ NEM + +P+ TY+ +I+ C + E L E M + I+P+T + ++ G
Sbjct: 529 LFNEMAEWNV-KPNRVTYNVMIEGYCEEGDMSKAFEFLKE-MTEKGIVPDTYSYRPLIHG 586
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
G+ + KV L +C+ + ++ F G+++ ++ G++
Sbjct: 587 LCLTGQASE-AKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ + +LI K + +++ M Y ++I+A + GD K +
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
D M EG + T+ +ING AG ++ + N Y L TK
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
E M+ + TY ++I + ++G +I + MI DG+
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQG---RIEEASELITRMIGDGV 818
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/337 (21%), Positives = 128/337 (37%), Gaps = 4/337 (1%)
Query: 117 EVFDMLKEHS--FYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
+ F+ LKE + P +Y LI L +GQ A+ + + C+ + YT LL
Sbjct: 560 KAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLL 619
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+CR L+EA S+ EM + D+ Y LI + L L ++M R +
Sbjct: 620 HGFCREGKLEEALSVCQEMVQRGV-DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGL 678
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ V ++ K G F + + M+ + C P+ T +I+ G ++ E
Sbjct: 679 KPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI-NEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
K + P T+ + K + + + + T+TYN +I F
Sbjct: 738 VLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGF 797
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G + +M +G+ D T+ +IN K I + I +
Sbjct: 798 CRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
YN ++ C A ++ + + M P++ T
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 143/365 (39%), Gaps = 22/365 (6%)
Query: 140 VLLGKSGQPHRARQLFTTM-IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPL 198
+L+G P + F + + G D S ++ L+ A ++NL A S+L + L
Sbjct: 76 ILIGTIDDPKLGLRFFNFLGLHRGFDHSTASFCILIHALVKANLFWPASSLLQTLLLRAL 135
Query: 199 CQPDVFT----------------YSTLIKPCVDAFKFDLVELLYEDMAAR-SIMPNTVTQ 241
DVF + LI+ V + + L+++ M + S++P T
Sbjct: 136 KPSDVFNVLFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTL 195
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
+ +L G K F ++ + M+ S +PDV+ +I + + ++
Sbjct: 196 SALLHGLVKFRHFGLAMELFNDMV-SVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHME 254
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
G + +N+LI KK+ + + + + TY ++ V + +
Sbjct: 255 ATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFE 314
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
D+M L+ G G + ++ V+ F ++ N YNA++
Sbjct: 315 IGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALI 374
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITD 481
+ K E E +F RM P+D TY+I+I+ + + G D E M+
Sbjct: 375 DSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE---MVDT 431
Query: 482 GIKVS 486
G+K+S
Sbjct: 432 GLKLS 436
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 1/109 (0%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
TY LI + G+ A +L T MI +G P TYT ++ CR N + +A + N
Sbjct: 788 ATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 193 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
M + +PD Y+TLI C A + L +M + ++PN T
Sbjct: 848 MTEKGI-RPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTS 895
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 139/323 (43%), Gaps = 2/323 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY L+ L K+G+ A +LF M E G + YT+L++ CR + AF + +E+
Sbjct: 296 TYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDEL 355
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
L P +TY LI + E+L +M ++ + V N ++ GY + G
Sbjct: 356 TEKGL-SPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGM 414
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
D+ + M E + DV+T NTI S F + + D ++W + G++ T ++
Sbjct: 415 VDEASMIYDVM-EQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYT 473
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
LI Y K+ ++ + M TYN +I A+ G K M A
Sbjct: 474 NLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEAN 533
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
GM DS T+ LI+G A + + + +N+ Y ++S +KA E
Sbjct: 534 GMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEA 593
Query: 434 ERVFKRMKDNQCPPDDTTYTIMI 456
++ MK D+ YT +I
Sbjct: 594 FGLYDEMKRKGYTIDNKVYTALI 616
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/365 (21%), Positives = 150/365 (41%), Gaps = 19/365 (5%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
++ + + L VFD + + E + + +V K + ++F M++ G +
Sbjct: 165 VDNGMFEEGLRVFDYMVKKGL-SIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKIT 223
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
+ T ++ CR ++++ ++ E + +P+ +TY+T+I V F VE +
Sbjct: 224 VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGI-KPEAYTYNTIINAYVKQRDFSGVEGVL 282
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
+ M ++ N VT +++ K GK EK+ M E + DV ++IS
Sbjct: 283 KVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER-GIESDVHVYTSLISWNCR 341
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
G + +++ G+ P + T+ LI K +M M+ T
Sbjct: 342 KGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVV 401
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF--------ANAGLFHKV 398
+N +I+ + G +D M +G +AD T + + F A LF +
Sbjct: 402 FNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMM 461
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
V+L+ T Y ++ K ++ E +R+F M P+ TY +MI A
Sbjct: 462 EGGVKLS--------TVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYA 513
Query: 459 YRKEG 463
Y K+G
Sbjct: 514 YCKQG 518
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 111/237 (46%), Gaps = 6/237 (2%)
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
+ L K + D ++ M++S K V+++ ++ G+++ +K ++F
Sbjct: 194 VFLVAAKKRRRIDLCLEIFRRMVDS-GVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSV 252
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
GI+PE T+N +I AY K+R + + V++ M+K + TY ++E G +
Sbjct: 253 KGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSD 312
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVL 421
E FD+MR G+++D + LI+ G + +L EK ++ ++ Y A++
Sbjct: 313 AEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKRAFLLFDELTEK-GLSPSSYTYGALI 371
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK---IYYLEQEK 475
K ++ E + M+ + +I+ Y ++GM D+ IY + ++K
Sbjct: 372 DGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQK 428
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/345 (19%), Positives = 144/345 (41%), Gaps = 10/345 (2%)
Query: 145 SGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVF 204
+G ++F M+++G + L A + +D I M + + + V+
Sbjct: 167 NGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGV-KITVY 225
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
+ + +++ + + + L ++ + + I P T N +++ Y K F +E VL M
Sbjct: 226 SLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVM 285
Query: 265 LESTSCKPDV-WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
+ V +T+ +SV G++ EK +++ R GIE + + LI +K
Sbjct: 286 KKDGVVYNKVTYTLLMELSV--KNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKG 343
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+ + + + + ++ TY +I+ VG+ E ++M+++G+ F
Sbjct: 344 NMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFN 403
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
LI+G+ G+ + + E+ + N + S + + E ++ RM +
Sbjct: 404 TLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEG 463
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQP 488
+YT +I+ Y KEG +E+ K+ + K QP
Sbjct: 464 GVKLSTVSYTNLIDVYCKEG------NVEEAKRLFVEMSSKGVQP 502
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY +I K G+ AR+L M G DP TYT+L+ C ++ +DEA
Sbjct: 501 QPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMR 560
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
+ +EM L Q V TY+ +I A K D LY++M
Sbjct: 561 LFSEMGLKGLDQNSV-TYTVMISGLSKAGKSDEAFGLYDEM 600
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 153/358 (42%), Gaps = 8/358 (2%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P Y +I L K+G + A LF M G P YT+L+ C S +A S
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+L M + +PDV T++ LI V KF E LY +M SI PN T +++G+
Sbjct: 234 LLRGMTKRKI-KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGF 292
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
G D+ ++ ++E+ C PDV ++I+ F ++D K + + G+
Sbjct: 293 CMEGCVDEARQMFY-LMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T T+ LI +G+ + V +M P TYN ++ G K F+
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411
Query: 369 QMR---AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
M+ +G+ + T+ L++G G K + + K E+ Y ++
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
KA + +F + P+ TYT MI +EG+ + + L ++ K DG+
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMK---EDGV 526
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 139/341 (40%), Gaps = 39/341 (11%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+S QP+ A M++ G +P T+T+L+ +C N ++EA S++N+M + +PDV
Sbjct: 119 QSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGI-KPDV 177
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
Y+T+I + L++ M I P+ V +++G +G++ + +L
Sbjct: 178 VMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRG 237
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M + KPDV T N +I F G+ E+ Y + I P T+ LI + +
Sbjct: 238 MTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEG 296
Query: 324 MYDKMSTVMEYMR-KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
D+ + M K FP + Y ++I F + F +M +G+ ++ T+
Sbjct: 297 CVDEARQMFYLMETKGCFPDVVA-YTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITY 355
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
LI GF G K +A+ VF M
Sbjct: 356 TTLIQGFGQVG-------------KPNVAQ----------------------EVFSHMVS 380
Query: 443 NQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
PP+ TY +++ G K + ++ + DG+
Sbjct: 381 RGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGV 421
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 120/275 (43%), Gaps = 6/275 (2%)
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
Y +++ + + +F+ L+ M +P+ + +L+ K KFD + L
Sbjct: 39 NYREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVIN-LCDH 97
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG-KKR 323
L+ D++T N +++ F Q + + K G EP+ TF LI + R
Sbjct: 98 LQIMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR 157
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
M + MS V + M ++ Y +I++ G FDQM G++ D +
Sbjct: 158 MEEAMSMVNQ-MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYT 216
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
L+NG N+G + S ++ K +I + +NA++ A K ++ E ++ M
Sbjct: 217 SLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRM 276
Query: 444 QCPPDDTTYTIMIEAYRKEGMND---KIYYLEQEK 475
P+ TYT +I + EG D +++YL + K
Sbjct: 277 SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETK 311
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 150/359 (41%), Gaps = 3/359 (0%)
Query: 105 ERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
R+ K +AL F L + SF+ Y +++ S Q + A LFT M+E
Sbjct: 11 NRLVKGNSGKALS-FSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLFTHMVESRPL 69
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
PS +T LL + D ++ + ++ + D++T + L+ + + L
Sbjct: 70 PSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH-DLYTCNLLMNCFCQSSQPYLASS 128
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
M P+ VT +++G+ + ++ +++ M+E KPDV TII
Sbjct: 129 FLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE-MGIKPDVVMYTTIIDSL 187
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
G ++ +++ N+GI P+ + L+ + +++ M K +
Sbjct: 188 CKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV 247
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
T+N +I+AF G + E +++M + + T+ LINGF G + L
Sbjct: 248 ITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYL 307
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E + Y ++++ K + + + ++F M + TYT +I+ + + G
Sbjct: 308 METKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVG 366
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 149/339 (43%), Gaps = 4/339 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY +I + G +A + + ++ GC P TYT L+ CR A +
Sbjct: 207 PDVITYNTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEV 266
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
L +M C PD+ TY++L+ + V + + + + + NTVT N +L
Sbjct: 267 LEDMAVEG-CYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLC 325
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+D++E++L+ M +++ C P V T N +I+ + ++ + P+
Sbjct: 326 SHEYWDEVEEILNIMYQTSYC-PTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDI 384
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
T+N ++GA K+ M D ++ ++ P TYN+VI+ G K + Q
Sbjct: 385 VTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQ 444
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKAE 428
M G+ D T LI GF A L + + + + + +T+ + C K E
Sbjct: 445 MLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKE 504
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
M +E V + M C PD+T YT +++ + GM +
Sbjct: 505 IEMAIE-VVEIMLTGGCKPDETIYTAIVKGVEEMGMGSE 542
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 132/318 (41%), Gaps = 5/318 (1%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
ET +L C + L +A ++ M H P + S L++ + D +
Sbjct: 105 ETNNEILHNLCSNGKLTDACKLVEVMARHNQV-PHFPSCSNLVRGLARIDQLDKAMCILR 163
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M +P+T+T N+++ K G +L M S S PDV T NT+I +
Sbjct: 164 VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGS-PPDVITYNTVIRCMFDY 222
Query: 288 GQIDMMEK-WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
G + + W ++ +N G P T+ +L+ + + V+E M T
Sbjct: 223 GNAEQAIRFWKDQLQN-GCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
YN+++ G+ + + + + G++ ++ T+ L++ + + +V + +
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM-N 465
+ YN +++ KA L F +M + +C PD TY ++ A KEGM +
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 466 DKIYYLEQEKKTMITDGI 483
D I L K T G+
Sbjct: 402 DAIELLGLLKNTCCPPGL 419
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 96 VNTVTED--LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQ 153
+NTVT + L + W + E+ +++ + S Y P TY LI L K+ RA
Sbjct: 312 LNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS-YCPTVITYNILINGLCKARLLSRAID 370
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
F M+E+ C P TY +L A + ++D+A +L +KN C P + TY+++I
Sbjct: 371 FFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKN-TCCPPGLITYNSVIDGL 429
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
LY M I P+ +T+ ++ G+ +A ++ +VL
Sbjct: 430 AKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVL 477
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 157/381 (41%), Gaps = 43/381 (11%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK--- 194
L+ LG++ R L M E P T L+ C+S +DEA + +M+
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 195 --NHPLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKA 251
+ + + D ++TLI + + ELL +PN VT N ++ GY +A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM-------MEK--------- 295
GK + ++V+S M E KP+V T+NTI+ ++M MEK
Sbjct: 420 GKLETAKEVVSRMKED-EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 296 -------------------WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
WYEK G P+ + + LI + R V+E ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
+ F YN +I F D +A+ + M EG K DS T+ LI+ F F
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMK-DNQCPPDDTTYTIM 455
V ++ + + T Y AV+ A +L E ++FK M ++ P+ Y I+
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 456 IEAYRKEGMNDKIYYLEQEKK 476
I A+ K G + L++E K
Sbjct: 659 INAFSKLGNFGQALSLKEEMK 679
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/378 (21%), Positives = 167/378 (44%), Gaps = 9/378 (2%)
Query: 114 QALEVFDMLK-----EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTM-IEEGCDPSP 167
+ALEVF+ ++ + + + + LI L K G+ A +L M +EE C P+
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TY L+ YCR+ L+ A +++ MK + +P+V T +T++ ++ + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEI-KPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
DM + N VT ++ ++ MLE+ C PD +IS +
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQV 524
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
+ + EK + G + +N+LIG + K +K+ ++ M K + TY
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-LAE 406
N +I F D +++E +QMR +G+ T+ +I+ + + G + + + +
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
++ NT YN +++A +K + + + + MK P+ TY + + ++ +
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 467 KIYYLEQEKKTMITDGIK 484
+ L E + + I+
Sbjct: 705 TLLKLMDEMVEHLVNQIR 722
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 165/419 (39%), Gaps = 45/419 (10%)
Query: 97 NTVTEDLS-ERIEKKQWLQALEVFDMLKEHSFY--EPKEGTYMKLIVLLGKSGQPHRARQ 153
N +T D+ + K++ L ++ ++ S + P + I L K+ + + A
Sbjct: 221 NRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWD 280
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
+ + +++ + ALL+ R+ + ++ +M + +PDV T LI
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTL 339
Query: 214 VDAFKFDLVELLYEDMAARS------IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
+ + D ++E M + I +++ N ++ G K G+ + E++L M
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
C P+ T N +I + G+++ ++ + + I+P T N ++G + +
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
M K TY +I A V + + Y +++M G D+K + LI+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 388 GFANAGLFHKVISTVQ-----------LAEKFEIA------------------------E 412
G H I V+ LA I
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
++ YN ++S K +D +ER+ ++M+++ P TTY +I+AY G D+ L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 121/306 (39%), Gaps = 17/306 (5%)
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDL--- 221
+ + ++ R+ L+D+AF +L+EM + + P+ T ++ + +K L
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH---EVWKERLLTE 240
Query: 222 --VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
+ L ++ + PN+V +S K + + +LS ++++ + + N
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT-PLEAPPFNA 299
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
++S G I M K I P+ T ILI K R D+ V E MR +
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 340 ------FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA-DSKTFCCLINGFANA 392
+ +N +I+ VG K E +M+ E ++ T+ CLI+G+ A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G V ++ EI N N ++ + L F M+ + TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 453 TIMIEA 458
+I A
Sbjct: 480 MTLIHA 485
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/381 (25%), Positives = 157/381 (41%), Gaps = 43/381 (11%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK--- 194
L+ LG++ R L M E P T L+ C+S +DEA + +M+
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 195 --NHPLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKA 251
+ + + D ++TLI + + ELL +PN VT N ++ GY +A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM-------MEK--------- 295
GK + ++V+S M E KP+V T+NTI+ ++M MEK
Sbjct: 420 GKLETAKEVVSRMKED-EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 296 -------------------WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
WYEK G P+ + + LI + R V+E ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
+ F YN +I F D +A+ + M EG K DS T+ LI+ F F
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMK-DNQCPPDDTTYTIM 455
V ++ + + T Y AV+ A +L E ++FK M ++ P+ Y I+
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 456 IEAYRKEGMNDKIYYLEQEKK 476
I A+ K G + L++E K
Sbjct: 659 INAFSKLGNFGQALSLKEEMK 679
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 168/389 (43%), Gaps = 50/389 (12%)
Query: 114 QALEVFDMLK-----EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTM-IEEGCDPSP 167
+ALEVF+ ++ + + + + LI L K G+ A +L M +EE C P+
Sbjct: 347 EALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNA 406
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TY L+ YCR+ L+ A +++ MK + +P+V T +T++ ++ + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEI-KPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
DM + N VT ++ ++ MLE+ C PD +IS +
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQV 524
Query: 288 GQ-----------------IDMM---------------EKWYEKFRNF---GIEPETRTF 312
+ +D++ EK YE + G +P++ T+
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITY 584
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
N LI +GK + ++ + +ME MR+ T +TY VI+A+ VG+ F M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 373 EG-MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV---LSACTKAE 428
+ ++ + LIN F+ G F + +S + + + N YNA+ L+ T+ E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
L+ ++ M + C P+ T I++E
Sbjct: 705 TLL---KLMDEMVEQSCEPNQITMEILME 730
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/419 (19%), Positives = 165/419 (39%), Gaps = 45/419 (10%)
Query: 97 NTVTEDLS-ERIEKKQWLQALEVFDMLKEHSFY--EPKEGTYMKLIVLLGKSGQPHRARQ 153
N +T D+ + K++ L ++ ++ S + P + I L K+ + + A
Sbjct: 221 NRITADIVLHEVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWD 280
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
+ + +++ + ALL+ R+ + ++ +M + +PDV T LI
Sbjct: 281 ILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTL 339
Query: 214 VDAFKFDLVELLYEDMAARS------IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
+ + D ++E M + I +++ N ++ G K G+ + E++L M
Sbjct: 340 CKSRRVDEALEVFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLE 399
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
C P+ T N +I + G+++ ++ + + I+P T N ++G + +
Sbjct: 400 ERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNM 459
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
M K TY +I A V + + Y +++M G D+K + LI+
Sbjct: 460 AVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALIS 519
Query: 388 GFANAGLFHKVISTVQ-----------LAEKFEIA------------------------E 412
G H I V+ LA I
Sbjct: 520 GLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKP 579
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
++ YN ++S K +D +ER+ ++M+++ P TTY +I+AY G D+ L
Sbjct: 580 DSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKL 638
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 3/189 (1%)
Query: 114 QALEVFDMLK--EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
A +V++ML E +P TY LI GK ++ M E+G DP+ TY
Sbjct: 561 NAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYG 620
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
A++ AYC LDEA + +M H P+ Y+ LI F L E+M
Sbjct: 621 AVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKM 680
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
+ + PN T N + + + + + K++ M+E SC+P+ TM ++ ++
Sbjct: 681 KMVRPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ-SCEPNQITMEILMERLSGSDELV 739
Query: 292 MMEKWYEKF 300
+ K+ + +
Sbjct: 740 KLRKFMQGY 748
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/306 (21%), Positives = 121/306 (39%), Gaps = 17/306 (5%)
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDL--- 221
+ + ++ R+ L+D+AF +L+EM + + P+ T ++ + +K L
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH---EVWKERLLTE 240
Query: 222 --VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
+ L ++ + PN+V +S K + + +LS ++++ + + N
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT-PLEAPPFNA 299
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
++S G I M K I P+ T ILI K R D+ V E MR +
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKR 359
Query: 340 ------FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA-DSKTFCCLINGFANA 392
+ +N +I+ VG K E +M+ E ++ T+ CLI+G+ A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRA 419
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G V ++ EI N N ++ + L F M+ + TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 453 TIMIEA 458
+I A
Sbjct: 480 MTLIHA 485
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 14/333 (4%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
L++ L K + ++ MI P+ T+ ++ A C++ +++A ++ +MK +
Sbjct: 194 LMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYG 253
Query: 198 LCQPDVFTYSTLIKPCVDAF-------KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGK 250
C P+V +Y+TLI D + K + + ++M + PN T NI++ G+ K
Sbjct: 254 -CSPNVVSYNTLI----DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWK 308
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
KV ML+ KP+V + N++I+ N G+I +K + G++P
Sbjct: 309 DDNLPGSMKVFKEMLDQ-DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLI 367
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
T+N LI + K M + + ++ TT YN +I+A+ +G + ++M
Sbjct: 368 TYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
EG+ D T+ CLI G G + + TF+ + C K E
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGES- 486
Query: 431 MEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ + K M P TY I+++ Y KEG
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEG 519
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 160/342 (46%), Gaps = 13/342 (3%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR---SNLLDE 185
+P T+ +I L K+G+ ++AR + M GC P+ +Y L+ YC+ + + +
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYK 279
Query: 186 AFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVL 245
A ++L EM + + P++ T++ LI ++++M + + PN ++ N ++
Sbjct: 280 ADAVLKEMVENDV-SPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 246 SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF---RN 302
+G GK + + M+ S +P++ T N +I+ F + DM+++ + F +
Sbjct: 339 NGLCNGGKISEAISMRDKMV-SAGVQPNLITYNALINGFC---KNDMLKEALDMFGSVKG 394
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
G P TR +N+LI AY K D + E M + TYN +I G+ +
Sbjct: 395 QGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEA 454
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
+ FDQ+ ++G+ D TF L+ G+ G K ++ K + YN V+
Sbjct: 455 AKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMK 513
Query: 423 ACTKAEDLMEMERVFKRM-KDNQCPPDDTTYTIMIEAYRKEG 463
K +L + +M K+ + + +Y ++++ Y ++G
Sbjct: 514 GYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 94/208 (45%), Gaps = 5/208 (2%)
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY----GKKRMYD 326
+P+V+T N +I+ G+++ E + +G P ++N LI Y G +MY
Sbjct: 220 QPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMY- 278
Query: 327 KMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLI 386
K V++ M + +T+N +I+ F + F +M + +K + ++ LI
Sbjct: 279 KADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLI 338
Query: 387 NGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCP 446
NG N G + IS + N YNA+++ K + L E +F +K
Sbjct: 339 NGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV 398
Query: 447 PDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
P Y ++I+AY K G D + L++E
Sbjct: 399 PTTRMYNMLIDAYCKLGKIDDGFALKEE 426
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 107/239 (44%), Gaps = 8/239 (3%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY LI K+ A +F ++ +G P+ Y L+ AYC+ +D+ F+
Sbjct: 363 QPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFA 422
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM+ + PDV TY+ LI + + L++ + ++ +P+ VT +I++ GY
Sbjct: 423 LKEEMEREGIV-PDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKG-LPDLVTFHILMEGY 480
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF---GNMGQIDMMEKWYEKFRNFGI 305
+ G+ + +L M KP T N ++ + GN+ M EK R +
Sbjct: 481 CRKGESRKAAMLLKEM-SKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR--L 537
Query: 306 EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
++N+L+ Y +K + + ++ M + TY V E D G ++E
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIE 596
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 88/202 (43%), Gaps = 3/202 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+AL++F +K P Y LI K G+ L M EG P TY L
Sbjct: 384 EALDMFGSVKGQGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCL 442
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+A CR+ ++ A + +++ + L PD+ T+ L++ + +L ++M+
Sbjct: 443 IAGLCRNGNIEAAKKLFDQLTSKGL--PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ P +T NIV+ GY K G + + M + + +V + N ++ + G+++
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560
Query: 294 EKWYEKFRNFGIEPETRTFNIL 315
+ G+ P T+ I+
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIV 582
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 169/417 (40%), Gaps = 55/417 (13%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ALE+ + +H EP TY L G A ++ M+++G P TYT L
Sbjct: 275 EALELASDMNKHGV-EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 174 L------------------------------------AAYCRSNLLDEAFSILNEMKNHP 197
L + C++ +DEA S+ N+MK
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
L PD+ YS +I KFD+ LY++M + I+PN+ T +L G + G +
Sbjct: 394 L-SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+L S++ S D+ N +I + G I+ + ++ GI P TFN LI
Sbjct: 453 RSLLDSLISSGE-TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
Y K + + +++ ++ + +Y +++A+ + G+ K+++ +M+AEG+
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 378 DSKTFCCLINGFANA------------GLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
+ T+ + G +F K ++ E I + YN ++
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK----IYYLEQEKKTM 478
+ + L + MK TY I+I++ G K IY L+++ ++
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 142/340 (41%), Gaps = 13/340 (3%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K G A+ F T+++ G PS ++ L+ C + EA + ++M H + +PD
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV-EPDS 292
Query: 204 FTYSTLIKPCVDAFKFDLVELL------YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
TY+ L K F L+ ++ DM + + P+ +T I+L G + G D
Sbjct: 293 VTYNILAKG------FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+L ML + + ++S G+ID + + + G+ P+ ++I+I
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
K +D + + M + + T+ ++ G D + + G
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
D + +I+G+A +G + + ++ + I + +N+++ K +++ E ++
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
+K P +YT +++AY G I L +E K
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 143 GKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPD 202
KSG A +LF +IE G PS T+ +L+ YC++ + EA IL+ +K + L P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL-APS 537
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
V +Y+TL+ + ++ L +M A I P VT +++ G + K + VL
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF---GIEPETRTFNILIGAY 319
+ EK + R+ GI P+ T+N +I
Sbjct: 598 ERI---------------------------FEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
+ + +E M+ +++TYN +I++ G + + ++ + +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 380 KTFCCLINGFANAG-------LFHKVI 399
+ LI G LFH+++
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 122/303 (40%), Gaps = 7/303 (2%)
Query: 164 DPSPETYTALLAAYCRSNLLDEAFSIL--NEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
D + TY+ ++ CR L++A L +E K+ P V ++++++ D+
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKD---IGPSVVSFNSIMSGYCKLGFVDM 240
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
+ + + ++P+ + NI+++G G + ++ S M +PD T N +
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILA 299
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
F +G I + + G+ P+ T+ IL+ + D +++ M F
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 342 WTTSTYNNV-IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
+ +V + G F+QM+A+G+ D + +I+G G F +
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 401 TVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR 460
I N+ + A+L + L+E + + + D Y I+I+ Y
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 461 KEG 463
K G
Sbjct: 480 KSG 482
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 159/365 (43%), Gaps = 10/365 (2%)
Query: 117 EVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT-ALLA 175
E+ +++ S + K + + ++ + KS +A F + + P Y LL
Sbjct: 60 ELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119
Query: 176 AYCRSNLLDEAFSILNEMKNHPLC--QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
C E S L K+ LC P +T++ LI+ D+ D L+++M +
Sbjct: 120 ESCIKERRVEFVSWL--YKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKG 177
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
PN T I++ GY KAG D+ ++L++M ES P+ NTI+S F G+ D
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNAM-ESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAY---GKKRMYDKMSTVMEYMRKLQFPWTTS-TYNN 349
EK EK R G+ P+ TFN I A GK ++ + ME L P S TYN
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+++ F VG ++ + F+ +R A +++ + G G F + + ++
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
I + YN ++ K L + + + MK N PD TY ++ Y G D
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAK 416
Query: 470 YLEQE 474
L QE
Sbjct: 417 SLLQE 421
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 151/341 (44%), Gaps = 4/341 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P+ T+ LI L S AR+LF M E+GC P+ T+ L+ YC++ L D+ +
Sbjct: 145 PQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLEL 204
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
LN M++ + P+ Y+T++ + D E + E M ++P+ VT N +S
Sbjct: 205 LNAMESFGVL-PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALC 263
Query: 250 KAGKFDQMEKVLSSMLESTSC---KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
K GK ++ S M +P+ T N ++ F +G ++ + +E R
Sbjct: 264 KEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDL 323
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
+++NI + + + + TV++ M + +YN +++ +G + +
Sbjct: 324 ASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTI 383
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
M+ G+ D+ T+ CL++G+ + G S +Q + N N +L + K
Sbjct: 384 VGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWK 443
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+ E E + ++M + D T I+++ G DK
Sbjct: 444 MGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDK 484
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 154/394 (39%), Gaps = 29/394 (7%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVF-DM-LKEH-SFYEPKEGTYMKLIVLLGKSGQPHRAR 152
+ T +S ++ + L A +F DM L E+ P TY ++ K G A+
Sbjct: 252 IVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAK 311
Query: 153 QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP 212
LF ++ E S ++Y L R EA ++L +M + + P +++Y+ L+
Sbjct: 312 TLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGI-GPSIYSYNILMDG 370
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
+ + M + P+ VT +L GY GK D + +L M+ + +C P
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRN-NCLP 429
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
+ +T N ++ MG+I E+ K G +T T NI++ DK ++
Sbjct: 430 NAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIV 489
Query: 333 EYMR--------KLQFPWT---------------TSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+ MR L + TY+ ++ G + F +
Sbjct: 490 KGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAE 549
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
M E ++ DS + I+ F G ++ EK ++ YN+++
Sbjct: 550 MMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQ 609
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ E+ + MK+ P+ TY I+ Y EG
Sbjct: 610 IFEIHGLMDEMKEKGISPNICTYNTAIQ-YLCEG 642
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 140/363 (38%), Gaps = 38/363 (10%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T L+ L K G+ A +L M E+G T ++ C S LD+A I
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Query: 190 LNEMKNHPL----------------------CQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
+ M+ H C PD+ TYSTL+ A +F + L+
Sbjct: 489 VKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFA 548
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+M + P++V NI + + K GK +VL M E C + T N++I G
Sbjct: 549 EMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM-EKKGCHKSLETYNSLILGLGIK 607
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
QI + ++ + GI P T+N I + + + +++ M + ++
Sbjct: 608 NQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSF 667
Query: 348 NNVIEAFTDVGDAKNMEYTFDQM-----RAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
+IEAF V D + F+ + EG+ + + N AG K +
Sbjct: 668 KYLIEAFCKVPDFDMAQEVFETAVSICGQKEGL------YSLMFNELLAAGQLLKATELL 721
Query: 403 Q--LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR 460
+ L FE+ T Y ++ + K ++L + +M D D +I+
Sbjct: 722 EAVLDRGFELG--TFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLG 779
Query: 461 KEG 463
K G
Sbjct: 780 KMG 782
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE--P 307
+A ++++++ + +L S+ K + ++ +++S+F ID ++ R+ E P
Sbjct: 51 RAKMHEEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKP 110
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+N+L+ + K+R + +S + + M T T+N +I A D F
Sbjct: 111 SVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELF 170
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
D+M +G K + TF L+ G+ AGL K + + E F + N YN ++S+ +
Sbjct: 171 DEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCRE 230
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ E++ ++M++ PD T+ I A KEG
Sbjct: 231 GRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/417 (22%), Positives = 169/417 (40%), Gaps = 55/417 (13%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ALE+ + +H EP TY L G A ++ M+++G P TYT L
Sbjct: 275 EALELASDMNKHGV-EPDSVTYNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTIL 333
Query: 174 L------------------------------------AAYCRSNLLDEAFSILNEMKNHP 197
L + C++ +DEA S+ N+MK
Sbjct: 334 LCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADG 393
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
L PD+ YS +I KFD+ LY++M + I+PN+ T +L G + G +
Sbjct: 394 L-SPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEA 452
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+L S++ S D+ N +I + G I+ + ++ GI P TFN LI
Sbjct: 453 RSLLDSLISSGE-TLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIY 511
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
Y K + + +++ ++ + +Y +++A+ + G+ K+++ +M+AEG+
Sbjct: 512 GYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPP 571
Query: 378 DSKTFCCLINGFANA------------GLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
+ T+ + G +F K ++ E I + YN ++
Sbjct: 572 TNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLC 631
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK----IYYLEQEKKTM 478
+ + L + MK TY I+I++ G K IY L+++ ++
Sbjct: 632 RVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSL 688
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 142/340 (41%), Gaps = 13/340 (3%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K G A+ F T+++ G PS ++ L+ C + EA + ++M H + +PD
Sbjct: 234 KLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGV-EPDS 292
Query: 204 FTYSTLIKPCVDAFKFDLVELL------YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
TY+ L K F L+ ++ DM + + P+ +T I+L G + G D
Sbjct: 293 VTYNILAKG------FHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMG 346
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+L ML + + ++S G+ID + + + G+ P+ ++I+I
Sbjct: 347 LVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIH 406
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
K +D + + M + + T+ ++ G D + + G
Sbjct: 407 GLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETL 466
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
D + +I+G+A +G + + ++ + I + +N+++ K +++ E ++
Sbjct: 467 DIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKIL 526
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
+K P +YT +++AY G I L +E K
Sbjct: 527 DVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKA 566
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 38/267 (14%)
Query: 143 GKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPD 202
KSG A +LF +IE G PS T+ +L+ YC++ + EA IL+ +K + L P
Sbjct: 479 AKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGL-APS 537
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
V +Y+TL+ + ++ L +M A I P VT +++ G + K + VL
Sbjct: 538 VVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLR 597
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF---GIEPETRTFNILIGAY 319
+ EK + R+ GI P+ T+N +I
Sbjct: 598 ERI---------------------------FEKCKQGLRDMESEGIPPDQITYNTIIQYL 630
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
+ + +E M+ +++TYN +I++ G + + ++ + +
Sbjct: 631 CRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSK 690
Query: 380 KTFCCLINGFANAG-------LFHKVI 399
+ LI G LFH+++
Sbjct: 691 FAYTTLIKAHCVKGDPEMAVKLFHQLL 717
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 122/303 (40%), Gaps = 7/303 (2%)
Query: 164 DPSPETYTALLAAYCRSNLLDEAFSIL--NEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
D + TY+ ++ CR L++A L +E K+ P V ++++++ D+
Sbjct: 184 DKNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKD---IGPSVVSFNSIMSGYCKLGFVDM 240
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
+ + + ++P+ + NI+++G G + ++ S M +PD T N +
Sbjct: 241 AKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDM-NKHGVEPDSVTYNILA 299
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
F +G I + + G+ P+ T+ IL+ + D +++ M F
Sbjct: 300 KGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFE 359
Query: 342 WTTSTYNNV-IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
+ +V + G F+QM+A+G+ D + +I+G G F +
Sbjct: 360 LNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALW 419
Query: 401 TVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR 460
I N+ + A+L + L+E + + + D Y I+I+ Y
Sbjct: 420 LYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYA 479
Query: 461 KEG 463
K G
Sbjct: 480 KSG 482
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 106 bits (264), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 142/327 (43%), Gaps = 2/327 (0%)
Query: 132 EGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILN 191
E TY LI L K+G + +++ M E+G P+ TY ++ C+ +AF + +
Sbjct: 233 ERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFD 292
Query: 192 EMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKA 251
EM+ + ++ TY+TLI K + + + M + I PN +T N ++ G+
Sbjct: 293 EMRERGV-SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT 311
GK + L L+S P + T N ++S F G K ++ GI+P T
Sbjct: 352 GKLGKALS-LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVT 410
Query: 312 FNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+ ILI + + +K + M +L TY+ +I F G F M
Sbjct: 411 YTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMV 470
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
+ + + + +I G+ G ++ + ++ E+ E+A N Y ++ K
Sbjct: 471 EKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSK 530
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEA 458
E ER+ ++M D+ P + +++ A
Sbjct: 531 EAERLVEKMIDSGIDPSTSILSLISRA 557
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 85/360 (23%), Positives = 155/360 (43%), Gaps = 43/360 (11%)
Query: 119 FDMLKEHS--FYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
FD+L E + + P Y LI K G+ +A+ LF M + G + TYT L+
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIM 235
++ + + F + +M+ + P+++TY+ ++ + C D D + ++++M R +
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVF-PNLYTYNCVMNQLCKDGRTKDAFQ-VFDEMRERGVS 300
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
N VT N ++ G + K ++ KV+ M +S P++ T NT+I F +G++
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQM-KSDGINPNLITYNTLIDGFCGVGKLGKALS 359
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
++ G+ P T+NIL+ + +K
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRK--------------------------------- 386
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTT 415
GD +M G+K T+ LI+ FA + K I E+ + +
Sbjct: 387 --GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVH 444
Query: 416 FYNAVLSA-CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
Y+ ++ C K + + E R+FK M + C P++ Y MI Y KEG + + L +E
Sbjct: 445 TYSVLIHGFCIKGQ-MNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKE 503
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 131/315 (41%), Gaps = 4/315 (1%)
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
F M++ G P + LL S+ ++ +S NE K+ + DV+++ LIK C
Sbjct: 117 FNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVL--DVYSFGILIKGCC 174
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
+A + + L ++ PN V ++ G K G+ ++ + + M +
Sbjct: 175 EAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKLGLVANE 233
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
T +I+ G + YEK + G+ P T+N ++ K V +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
MR+ TYN +I DQM+++G+ + T+ LI+GF G
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTI 454
K +S + + ++ + YN ++S + D ++ K M++ P TYTI
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413
Query: 455 MIEAY-RKEGMNDKI 468
+I+ + R + M I
Sbjct: 414 LIDTFARSDNMEKAI 428
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/272 (19%), Positives = 102/272 (37%), Gaps = 2/272 (0%)
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
Y +I V + +L + +M +P + N +L+ + F+Q +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-- 154
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
+ DV++ +I G+I+ + FG P + LI KK
Sbjct: 155 NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
+K + M KL TY +I G K +++M+ +G+ + T+ C+
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCV 274
Query: 386 INGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
+N G + ++ N YN ++ + L E +V +MK +
Sbjct: 275 MNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGI 334
Query: 446 PPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
P+ TY +I+ + G K L ++ K+
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKS 366
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY LI GQ + A +LF +M+E+ C+P+ Y ++ YC+ A +
Sbjct: 441 PDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKL 500
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIV 244
L EM+ L P+V +Y +I+ K E L E M I P+T +++
Sbjct: 501 LKEMEEKEL-APNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P + TY LI +S +A QL +M E G P TY+ L+ +C ++EA
Sbjct: 405 KPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASR 464
Query: 189 ILNEM--KNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVL 245
+ M KN C+P+ Y+T+I C + + ++LL E M + + PN + ++
Sbjct: 465 LFKSMVEKN---CEPNEVIYNTMILGYCKEGSSYRALKLLKE-MEEKELAPNVASYRYMI 520
Query: 246 SGYGKAGKFDQMEKVLSSMLES 267
K K + E+++ M++S
Sbjct: 521 EVLCKERKSKEAERLVEKMIDS 542
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/358 (24%), Positives = 163/358 (45%), Gaps = 15/358 (4%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ + ++ +S P +Y +I + + +A +L M GC S T+ L
Sbjct: 160 KAVSLLREMRRNSLM-PDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGIL 218
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ A+C++ +DEA L EMK L + D+ Y++LI+ D + D + L++++ R
Sbjct: 219 IDAFCKAGKMDEAMGFLKEMKFMGL-EADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ---- 289
P +T N ++ G+ K G+ + ++ M+E +P+V+T +I +G+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIER-GVRPNVYTYTGLIDGLCGVGKTKEA 336
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+ ++ EK EP T+NI+I K + ++E M+K + TYN
Sbjct: 337 LQLLNLMIEKDE----EPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNI 392
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSK--TFCCLINGFANAGLFHKVISTVQL-AE 406
++ GD M + D ++ LI+G H+ + L E
Sbjct: 393 LLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVE 452
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
K + T N +L++ KA D+ + ++K++ D++ + TYT MI+ + K GM
Sbjct: 453 KLGAGDRVT-TNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 142/336 (42%), Gaps = 39/336 (11%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY LI K GQ A ++F MIE G P+ TYT L+ C EA +
Sbjct: 280 PCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQL 339
Query: 190 LNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
LN M +P+ TY+ +I K C D D VE++ E M R P+ +T NI+L G
Sbjct: 340 LNLMIEKDE-EPNAVTYNIIINKLCKDGLVADAVEIV-ELMKKRRTRPDNITYNILLGGL 397
Query: 249 GKAGKFDQMEKVLSSMLESTS-CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
G D+ K+L ML+ +S PDV + N +I G+
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIH---------------------GLCK 436
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
E R L +YD + + KL +T N ++ + GD +
Sbjct: 437 ENRLHQAL-------DIYDLL------VEKLGAGDRVTT-NILLNSTLKAGDVNKAMELW 482
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
Q+ + +S T+ +I+GF G+ + + E+ + YN +LS+ K
Sbjct: 483 KQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKE 542
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L + R+F+ M+ + PD ++ IMI+ K G
Sbjct: 543 GSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAG 578
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 137/314 (43%), Gaps = 4/314 (1%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A + M++ G + + LL CR+ +A S+L EM+ + L PDVF+Y+T+I
Sbjct: 126 AFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSL-MPDVFSYNTVI 184
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ + + + L +M + VT I++ + KAGK D+ L M +
Sbjct: 185 RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEM-KFMGL 243
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
+ D+ ++I F + G++D + +++ G P T+N LI + K + S
Sbjct: 244 EADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASE 303
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ E+M + TY +I+ VG K + M + + ++ T+ +IN
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM-KDNQ-CPPD 448
GL + V+L +K + YN +L DL E ++ M KD+ PD
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 449 DTTYTIMIEAYRKE 462
+Y +I KE
Sbjct: 424 VISYNALIHGLCKE 437
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 12/265 (4%)
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
F F ++ L M R N NI+L G + + + +L M S PDV+
Sbjct: 124 GFAFGVLAL----MLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREM-RRNSLMPDVF 178
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
+ NT+I F +++ + + + G T+ ILI A+ K KM M ++
Sbjct: 179 SYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKA---GKMDEAMGFL 235
Query: 336 RKLQFPWTTS---TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
++++F + Y ++I F D G+ + FD++ G + T+ LI GF
Sbjct: 236 KEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKL 295
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + + + + N Y ++ E ++ M + P+ TY
Sbjct: 296 GQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTY 355
Query: 453 TIMIEAYRKEGM-NDKIYYLEQEKK 476
I+I K+G+ D + +E KK
Sbjct: 356 NIIINKLCKDGLVADAVEIVELMKK 380
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 159/419 (37%), Gaps = 70/419 (16%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
QAL+VF ++E EP +Y L+ ++ Q + LF G P+ +TY L
Sbjct: 96 QALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVL 155
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ C+ ++A L+ M +PDVF+YST+I A K D L+++M+ R
Sbjct: 156 IKMSCKKKEFEKARGFLDWMWKEGF-KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ P+ NI++ G+ K ++ +LE +S P+V T N +IS G++D
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K +E+ + E + T++ LI DK +V + + + TYN ++
Sbjct: 275 LKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGG 334
Query: 354 FTDVGDAKN-------MEY---------------------------TFDQMRAEGMKADS 379
F G K ME+ + M A+G AD
Sbjct: 335 FCRCGKIKESLELWRIMEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADK 394
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAE--------------------------------- 406
T+ I+G G +K + +Q E
Sbjct: 395 TTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKE 454
Query: 407 --KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
K + N+ NA++ + L E + M N C P +Y I+I K G
Sbjct: 455 MSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAG 513
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/361 (21%), Positives = 166/361 (45%), Gaps = 17/361 (4%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A +FD H Y Y ++ L ++ + ++ + + C + +++
Sbjct: 26 AFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVI 85
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
Y ++++ D+A + M+ C+P + +Y+TL+ V+A ++ VE L+ +
Sbjct: 86 KTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGV 145
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN T N+++ K +F++ L M + KPDV++ +T+I+ G++D
Sbjct: 146 APNLQTYNVLIKMSCKKKEFEKARGFLDWMWKE-GFKPDVFSYSTVINDLAKAGKLDDAL 204
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ-----FPWTTSTYNN 349
+ +++ G+ P+ +NILI + K++ + T ME +L +P T+N
Sbjct: 205 ELFDEMSERGVAPDVTCYNILIDGFLKEKDH---KTAMELWDRLLEDSSVYP-NVKTHNI 260
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+I + G + +++M+ + D T+ LI+G +AG K S ++ +
Sbjct: 261 MISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERK 320
Query: 410 IAENTTFYNAVLSA---CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+ + YN +L C K ++ +E+ R+ +++ + +Y I+I+ + G D
Sbjct: 321 ASIDVVTYNTMLGGFCRCGKIKESLELWRIM----EHKNSVNIVSYNILIKGLLENGKID 376
Query: 467 K 467
+
Sbjct: 377 E 377
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 110/263 (41%), Gaps = 2/263 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y + TY I L +G ++A + + G Y +++ C+ L+EA
Sbjct: 390 YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEAS 449
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++ EM H + + + + LI + + +M P V+ NI++ G
Sbjct: 450 NLVKEMSKHGV-ELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICG 508
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
KAGKF + + MLE+ KPD+ T + ++ +ID+ + + +F G+E
Sbjct: 509 LCKAGKFGEASAFVKEMLEN-GWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLET 567
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ NILI D TVM M TYN ++E F VGD+ +
Sbjct: 568 DVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIW 627
Query: 368 DQMRAEGMKADSKTFCCLINGFA 390
M G++ D ++ ++ G
Sbjct: 628 GYMYKMGLQPDIISYNTIMKGLC 650
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 2/190 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
P +Y LI L K+G+ A M+E G P +TY+ LL CR +D A
Sbjct: 496 RPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALE 555
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ ++ L + DV ++ LI K D + +M R+ N VT N ++ G+
Sbjct: 556 LWHQFLQSGL-ETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGF 614
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K G ++ + M + +PD+ + NTI+ + ++++ RN GI P
Sbjct: 615 FKVGDSNRATVIWGYMYK-MGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPT 673
Query: 309 TRTFNILIGA 318
T+NIL+ A
Sbjct: 674 VYTWNILVRA 683
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 78/361 (21%), Positives = 142/361 (39%), Gaps = 8/361 (2%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
+TV DL++ + ALE+FD + E P Y LI K A +L+
Sbjct: 188 STVINDLAK---AGKLDDALELFDEMSERGV-APDVTCYNILIDGFLKEKDHKTAMELWD 243
Query: 157 TMIEEG-CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
++E+ P+ +T+ +++ + +D+ I MK + + D++TYS+LI D
Sbjct: 244 RLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNER-EKDLYTYSSLIHGLCD 302
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
A D E ++ ++ R + VT N +L G+ + GK + ++ M S ++
Sbjct: 303 AGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS--VNIV 360
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
+ N +I G+ID + G + T+ I I +K VM+ +
Sbjct: 361 SYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEV 420
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
Y ++I+ + +M G++ +S LI G
Sbjct: 421 ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRL 480
Query: 396 HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+ ++ K YN ++ KA E K M +N PD TY+I+
Sbjct: 481 GEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Query: 456 I 456
+
Sbjct: 541 L 541
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 155/381 (40%), Gaps = 43/381 (11%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK--- 194
L+ LG++ R L M E P T L+ C+S +DEA + +M+
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKR 359
Query: 195 --NHPLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKA 251
+ + + D ++TLI + + ELL PN VT N ++ GY +A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM-------MEK--------- 295
GK + ++V+S M E KP+V T+NTI+ ++M MEK
Sbjct: 420 GKLETAKEVVSRMKED-EIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVT 478
Query: 296 -------------------WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
WYEK G P+ + + LI + R V+E ++
Sbjct: 479 YMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLK 538
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
+ F YN +I F D + + + M EG K DS T+ LI+ F F
Sbjct: 539 EGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFE 598
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMK-DNQCPPDDTTYTIM 455
V ++ + + T Y AV+ A +L E ++FK M ++ P+ Y I+
Sbjct: 599 SVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNIL 658
Query: 456 IEAYRKEGMNDKIYYLEQEKK 476
I A+ K G + L++E K
Sbjct: 659 INAFSKLGNFGQALSLKEEMK 679
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 168/389 (43%), Gaps = 50/389 (12%)
Query: 114 QALEVFDMLK-----EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTM-IEEGCDPSP 167
+ALEVF+ ++ + + + + LI L K G+ A +L M +EE C P+
Sbjct: 347 EALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNA 406
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TY L+ YCR+ L+ A +++ MK + +P+V T +T++ ++ + +
Sbjct: 407 VTYNCLIDGYCRAGKLETAKEVVSRMKEDEI-KPNVVTVNTIVGGMCRHHGLNMAVVFFM 465
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
DM + N VT ++ ++ MLE+ C PD +IS +
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEA-GCSPDAKIYYALISGLCQV 524
Query: 288 GQ-----------------IDMM---------------EKWYEKFRNF---GIEPETRTF 312
+ +D++ EK YE + G +P++ T+
Sbjct: 525 RRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITY 584
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
N LI +GK + ++ + +ME MR+ T +TY VI+A+ VG+ F M
Sbjct: 585 NTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGL 644
Query: 373 EG-MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV---LSACTKAE 428
+ ++ + LIN F+ G F + +S + + + N YNA+ L+ T+ E
Sbjct: 645 HSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQGE 704
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
L+ ++ M + C P+ T I++E
Sbjct: 705 TLL---KLMDEMVEQSCEPNQITMEILME 730
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/376 (20%), Positives = 148/376 (39%), Gaps = 42/376 (11%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
+ I L K+ + + A + + +++ + ALL+ R+ + ++ +M
Sbjct: 264 RFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMDEV 323
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS------IMPNTVTQNIVLSGYGK 250
+ +PDV T LI + + D ++E M + I +++ N ++ G K
Sbjct: 324 KI-RPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCK 382
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
G+ + E++L M C P+ T N +I + G+++ ++ + + I+P
Sbjct: 383 VGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV 442
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
T N ++G + + M K TY +I A V + + Y +++M
Sbjct: 443 TVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKM 502
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-----------LAEKFEIA-------- 411
G D+K + LI+G H I V+ LA I
Sbjct: 503 LEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNT 562
Query: 412 ----------------ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
++ YN ++S K +D +ER+ ++M+++ P TTY +
Sbjct: 563 EKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAV 622
Query: 456 IEAYRKEGMNDKIYYL 471
I+AY G D+ L
Sbjct: 623 IDAYCSVGELDEALKL 638
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 117 EVFDMLK--EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
+V++ML E +P TY LI GK ++ M E+G DP+ TY A++
Sbjct: 564 KVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVI 623
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
AYC LDEA + +M H P+ Y+ LI F L E+M + +
Sbjct: 624 DAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMV 683
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN T N + + + + + K++ M+E SC+P+ TM ++ ++ +
Sbjct: 684 RPNVETYNALFKCLNEKTQGETLLKLMDEMVEQ-SCEPNQITMEILMERLSGSDELVKLR 742
Query: 295 KWYEKF 300
K+ + +
Sbjct: 743 KFMQGY 748
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 122/306 (39%), Gaps = 17/306 (5%)
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDL--- 221
+ + ++ R+ L+D+AF +L+EM + + P+ T ++ + +K L
Sbjct: 184 NSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH---EVWKGRLLTE 240
Query: 222 --VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
+ L ++ + PN+V +S K + + +LS ++++ + + N
Sbjct: 241 EKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKT-PLEAPPFNA 299
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
++S G I M K I P+ T ILI K R D+ V E MR +
Sbjct: 300 LLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKR 359
Query: 340 ------FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA-DSKTFCCLINGFANA 392
+ +N +I+ VG K E +M+ E A ++ T+ CLI+G+ A
Sbjct: 360 TDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRA 419
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G V ++ EI N N ++ + L F M+ + TY
Sbjct: 420 GKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTY 479
Query: 453 TIMIEA 458
+I A
Sbjct: 480 MTLIHA 485
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/253 (20%), Positives = 102/253 (40%), Gaps = 18/253 (7%)
Query: 224 LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC-KPDVWTMNTIIS 282
L+YE + + M N+ +N+V+ + G D KVL ML+ S P+ T + ++
Sbjct: 173 LVYERLDSN--MKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH 230
Query: 283 VF--GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF 340
G + + + +F + G+ P + I + K + ++ + K +
Sbjct: 231 EVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKT 290
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
P +N ++ D M +M ++ D T LIN + +V
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKS---RRVDE 347
Query: 401 TVQLAEKFE---------IAENTTFYNAVLSACTKAEDLMEMERVFKRMK-DNQCPPDDT 450
+++ EK I ++ +N ++ K L E E + RMK + +C P+
Sbjct: 348 ALEVFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAV 407
Query: 451 TYTIMIEAYRKEG 463
TY +I+ Y + G
Sbjct: 408 TYNCLIDGYCRAG 420
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 143/321 (44%), Gaps = 5/321 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+F+ + + P + TY L+ +L + PH+ R M E G Y A+
Sbjct: 523 KACELFESMMSYGV-TPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
++++ + L+ A + EM + + +PDV Y LI D E M
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNI-EPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCK--PDVWTMNTIISVFGNMGQID 291
I N+V N ++ Y K G D+ E + +L+S + PDV+T N +I+++ +
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
E ++ + G E TF +++ Y K +++ + + + MR+++ +YN+V+
Sbjct: 701 KAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
F G K TF +M + G++ D TF L G+ K + ++ K EI
Sbjct: 760 GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKEIK 819
Query: 412 ENTTFYNAVLSACTKAEDLME 432
+ + LS+ D ++
Sbjct: 820 RGLELWISTLSSLVGIGDCVD 840
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/361 (24%), Positives = 159/361 (44%), Gaps = 14/361 (3%)
Query: 114 QALEVFDMLKEHSFY-EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
Q EV ++K + P TY LI L K+ RA F M ++G P P +Y
Sbjct: 348 QLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
LL A+ ++++EA ++ EM + + + D +T S L + V+A +++E +
Sbjct: 408 LLYAFSIRHMVEEAEGLIAEMDDDNV-EIDEYTQSALTRMYVEA---EMLEKSWSWFKRF 463
Query: 233 SIMPNTVTQNIV--LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ N ++ + YG+ G + E+V E K V N +I +G
Sbjct: 464 HVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN--KRTVIEYNVMIKAYGISKSC 521
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ + +E ++G+ P+ T+N L+ M K +E MR+ + Y V
Sbjct: 522 EKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAV 581
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
I +F +G E + +M ++ D + LIN FA+ G + +S V+ ++ I
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCP----PDDTTYTIMIEAYRKEGMND 466
N+ YN+++ TK L E E +++++ + C PD T MI Y + M
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQS-CNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 467 K 467
K
Sbjct: 701 K 701
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 158/360 (43%), Gaps = 15/360 (4%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
E+ W +A+E+F+ K YE Y ++ +LGK+ + + L+ MI +G P
Sbjct: 163 EQIHWERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPIN 222
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY- 226
TY L+ Y + L A L +M + QPD T +++ A +F E +
Sbjct: 223 STYGTLIDVYSKGGLKVHALCWLGKMSKIGM-QPDEVTTGIVLQMYKKAREFQKAEEFFK 281
Query: 227 -----EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
E+ A + ++ T N ++ YGK+G+ + + MLE P T NT+I
Sbjct: 282 KWSCDENKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEE-GIVPTTVTFNTMI 340
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
++GN GQ+ + + + P+TRT+NILI + K ++ + M+
Sbjct: 341 HIYGNNGQLGEVTSLMKTMK-LHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLK 399
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+Y ++ AF+ + E +M + ++ D T L + A + K S
Sbjct: 400 PDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSW 459
Query: 402 VQLAEKFEIAENTTF--YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+ +F +A N + Y+A + A + L E ERVF ++ Y +MI+AY
Sbjct: 460 FK---RFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAY 515
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 154/347 (44%), Gaps = 6/347 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY +I GKSGQ A + F M+EEG P+ T+ ++ Y + L E S++ M
Sbjct: 300 TYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTM 359
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
K H C PD TY+ LI + +++M + P+ V+ +L +
Sbjct: 360 KLH--CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHM 417
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ E +++ M + + + D +T + + ++ ++ W+++F G + ++
Sbjct: 418 VEEAEGLIAEM-DDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAG-NMSSEGYS 475
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
I AYG++ + V +++ T YN +I+A+ + F+ M +
Sbjct: 476 ANIDAYGERGYLSEAERVFICCQEVN-KRTVIEYNVMIKAYGISKSCEKACELFESMMSY 534
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
G+ D T+ L+ A+A + HK ++ + + Y AV+S+ K L
Sbjct: 535 GVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMA 594
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLEQEKKTMI 479
E V+K M + PD Y ++I A+ G + + Y+E K+ I
Sbjct: 595 EEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 9/321 (2%)
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
Y ++ AY S ++A + M ++ + PD TY+TL++ A E M
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGV-TPDKCTYNTLVQILASADMPHKGRCYLEKM 566
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
+ + + V+S + K G+ + E+V M+E + +PDV +I+ F + G
Sbjct: 567 RETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVE-YNIEPDVVVYGVLINAFADTGN 625
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV----MEYMRKLQFPWTTS 345
+ + E + GI + +N LI Y K D+ + ++ K Q+P
Sbjct: 626 VQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP-DVY 684
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
T N +I +++ + E FD M+ G +A+ TF ++ + G F + +
Sbjct: 685 TSNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQM 743
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
+ +I + YN+VL E FK M + PDD+T+ + K GM+
Sbjct: 744 REMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMS 803
Query: 466 DK-IYYLEQEKKTMITDGIKV 485
K + +E+ +K I G+++
Sbjct: 804 KKAVRKIEEIRKKEIKRGLEL 824
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 149/327 (45%), Gaps = 2/327 (0%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y+ L+ +L + R R + + + + + AL+ ++ + +++E + +MK
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMK 214
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
+ + +P ++TY+ L+ V A D E ++E M + I P+ VT N ++ GY KAG+
Sbjct: 215 ENGI-EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
+ + L M E+ + D T T+I Y++ GI+ F++
Sbjct: 274 QKAMEKLRDM-ETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSL 332
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
+IG K+ ++ TV E M + + Y +I+ + G ++ +M EG
Sbjct: 333 VIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEG 392
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
K D T+ ++NG G + + +A N+ FY++++ KA + E E
Sbjct: 393 FKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAE 452
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRK 461
R+F+ M + C D Y +I+A+ K
Sbjct: 453 RLFEEMSEKGCTRDSYCYNALIDAFTK 479
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 153/374 (40%), Gaps = 48/374 (12%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ L V+ +KE+ EP TY L+ L + A ++F M P TY +
Sbjct: 205 ELLWVWRKMKENGI-EPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTM 263
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ YC++ +A L +M+ + D TY T+I+ C F LY++M +
Sbjct: 264 IKGYCKAGQTQKAMEKLRDMETRGH-EADKITYMTMIQACYADSDFGSCVALYQEMDEKG 322
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
I ++V+ G K GK ++ V +M+ S KP+V +I + G ++
Sbjct: 323 IQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGS-KPNVAIYTVLIDGYAKSGSVEDA 381
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF---PWTTSTYNNV 350
+ + + G +P+ T+++++ K ++ ++Y +F + Y+++
Sbjct: 382 IRLLHRMIDEGFKPDVVTYSVVVNGLCKN---GRVEEALDYFHTCRFDGLAINSMFYSSL 438
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
I+ G E F++M +G DS +C
Sbjct: 439 IDGLGKAGRVDEAERLFEEMSEKGCTRDS--YC--------------------------- 469
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ-CPPDDTTYTIMIEAYRKEGMNDKIY 469
YNA++ A TK + E +FKRM++ + C TYTI++ KE N++
Sbjct: 470 ------YNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEAL 523
Query: 470 YLEQEKKTMITDGI 483
L MI GI
Sbjct: 524 KLWD---MMIDKGI 534
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 85/212 (40%), Gaps = 5/212 (2%)
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
V N +I FG +G ++ + + K + GIEP T+N L+ D V E
Sbjct: 187 VSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFE 246
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
M + TYN +I+ + G + M G +AD T+ +I
Sbjct: 247 VMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADS 306
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
F ++ Q ++ I ++ V+ K L E VF+ M P+ YT
Sbjct: 307 DFGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYT 366
Query: 454 IMIEAYRKEG-MNDKIYYLEQEKKTMITDGIK 484
++I+ Y K G + D I L + MI +G K
Sbjct: 367 VLIDGYAKSGSVEDAIRLLHR----MIDEGFK 394
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
+M+++ S +P Y LI KSG A +L MI+EG P TY+ ++ C+
Sbjct: 352 NMIRKGS--KPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCK 409
Query: 180 SNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTV 239
+ ++EA + + L +F YS+LI A + D E L+E+M+ + ++
Sbjct: 410 NGRVEEALDYFHTCRFDGLAINSMF-YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSY 468
Query: 240 TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK 299
N ++ + K K D+ + M E C V+T ++S + + K ++
Sbjct: 469 CYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDM 528
Query: 300 FRNFGIEPETRTFNIL 315
+ GI P F L
Sbjct: 529 MIDKGITPTAACFRAL 544
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 99/239 (41%), Gaps = 30/239 (12%)
Query: 119 FDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYC 178
FD L +S + Y LI LGK+G+ A +LF M E+GC Y AL+ A+
Sbjct: 425 FDGLAINSMF------YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFT 478
Query: 179 RSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNT 238
+ +DEA ++ M+ C V+TY+ L+ + + L++ M + I P
Sbjct: 479 KHRKVDEAIALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTA 538
Query: 239 VTQNIVLSGYGKAGKFDQMEKVLSSM-----LESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ +G +GK + K+L + + +C+ +I+ G+I
Sbjct: 539 ACFRALSTGLCLSGKVARACKILDELAPMGVILDAACE-------DMINTLCKAGRIKEA 591
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGK--------KRMYDKMSTVMEYM----RKLQF 340
K + G E R ++I A K K M+ K+ E M R+++F
Sbjct: 592 CKLADGITERGREVPGRIRTVMINALRKVGKADLAMKLMHSKIGIGYERMGSVKRRVKF 650
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 152/346 (43%), Gaps = 17/346 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY L+ K G A Q+ M + P TY L+ C + + E +
Sbjct: 273 PNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLEL 332
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
++ MK+ L QPDV TY+TLI C + L E M + N VT NI L
Sbjct: 333 MDAMKSLKL-QPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLC 391
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF---GNM-GQIDMMEKWYEKFRNFGI 305
K K + + + + +++ PD+ T +T+I + G++ G ++MM + +K GI
Sbjct: 392 KEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK----GI 447
Query: 306 EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEY 365
+ T T N ++ A K+R D+ ++ K F TY +I F +
Sbjct: 448 KMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALE 507
Query: 366 TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSAC 424
+D+M+ + TF LI G + G + +LAE + +++TF + +L C
Sbjct: 508 MWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYC 567
Query: 425 TKAEDLMEMERVFKRMKD---NQCPPDDTTYTIMIEAYRKEGMNDK 467
+ +E+ F+ + + PD+ T I++ KEGM +K
Sbjct: 568 KEG----RVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEK 609
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/392 (22%), Positives = 161/392 (41%), Gaps = 76/392 (19%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
AR++F M++ G + +T+ L+ YC L++A +L M + PD TY+T++
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 211 KPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
K + DL ELL DM ++PN VT N ++ GY K G + +++ +++ T+
Sbjct: 248 KAMSKKGRLSDLKELLL-DMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIV-ELMKQTN 305
Query: 270 CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 329
PD+ T N +I+ N G + + + ++ ++P+ T+N LI + + +
Sbjct: 306 VLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEAR 365
Query: 330 TVMEYM-----------------------------RKLQ-------FPWTTSTYNNVIEA 353
+ME M RK++ F TY+ +I+A
Sbjct: 366 KLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKA 425
Query: 354 FTDVGDAKNMEYTFDQMRAEGMK-----------------------------------AD 378
+ VGD +M +G+K D
Sbjct: 426 YLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVD 485
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA-CTKAEDLMEMERVF 437
T+ LI GF K + +K +I + +N+++ C + + ME+ F
Sbjct: 486 EVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEK-F 544
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
+ ++ PDD+T+ +I Y KEG +K +
Sbjct: 545 DELAESGLLPDDSTFNSIILGYCKEGRVEKAF 576
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 128/303 (42%), Gaps = 5/303 (1%)
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV---DAFKFDL 221
PS + L+AY A I +M L +P++ T +TL+ V +F
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKL-KPNLLTCNTLLIGLVRYPSSFSISS 187
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
+++DM + N T N++++GY GK + +L M+ PD T NTI+
Sbjct: 188 AREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTIL 247
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
G++ +++ + G+ P T+N L+ Y K + ++E M++
Sbjct: 248 KAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVL 307
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
TYN +I + G + D M++ ++ D T+ LI+G GL +
Sbjct: 308 PDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKL 367
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD-NQCPPDDTTYTIMIEAYR 460
++ E + N +N L K E + R K + D + PD TY +I+AY
Sbjct: 368 MEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYL 427
Query: 461 KEG 463
K G
Sbjct: 428 KVG 430
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 96/202 (47%), Gaps = 12/202 (5%)
Query: 105 ERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
E++EK ALE++D +K+ P T+ LI L G+ A + F + E G
Sbjct: 500 EKVEK-----ALEMWDEMKKVKI-TPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVE 223
P T+ +++ YC+ +++AF NE H +PD +T + L+ C + +
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSF-KPDNYTCNILLNGLCKEGMTEKALN 612
Query: 224 LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISV 283
+ R + +TVT N ++S + K K + +LS M E +PD +T N+ IS+
Sbjct: 613 FFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEM-EEKGLEPDRFTYNSFISL 669
Query: 284 FGNMGQIDMMEKWYEKFRN-FG 304
G++ ++ +KF FG
Sbjct: 670 LMEDGKLSETDELLKKFSGKFG 691
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 8/299 (2%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NTV L + + ALEVF +++ TY LI L SG+ A +L
Sbjct: 188 NTVINGLCK---NRDLNNALEVFYCMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLR 243
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVD 215
M++ DP+ +TAL+ + + L EA ++ EM + P+VFTY++LI C+
Sbjct: 244 DMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV-VPNVFTYNSLINGFCIH 302
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
D + +++ M ++ P+ VT N +++G+ K+ + + K+ M D +
Sbjct: 303 GCLGD-AKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEM-TYQGLVGDAF 360
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
T NT+I + G++++ +K + + + G+ P+ T+NIL+ +K ++E +
Sbjct: 361 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDL 420
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+K + TYN +I+ K F + +G+K D+ + +I+G GL
Sbjct: 421 QKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/338 (23%), Positives = 143/338 (42%), Gaps = 4/338 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+ P T L+ + + A L +M G P+ Y ++ C++ L+ A
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ M+ + + D TY+TLI ++ ++ L DM R I PN + ++
Sbjct: 205 EVFYCMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K G + + M+ S P+V+T N++I+ F G + + ++ + G P
Sbjct: 264 FVKEGNLLEARNLYKEMIRR-SVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 308 ETRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
+ T+N LI + K KR+ D M E M TYN +I + G +
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCE-MTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 381
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
F++M G+ D T+ L++ N G K + V+ +K E+ + YN ++ +
Sbjct: 382 FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 441
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ L E +F+ + PD Y MI ++G+
Sbjct: 442 TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 1/250 (0%)
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
+ KFD L+ +M +P+ V VL+ K KFD + + M E+ D
Sbjct: 55 LHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHD 113
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
+++ +I F ++ + K G P T L+ + + + + ++++
Sbjct: 114 LYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVD 173
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
M F YN VI D N F M +G++AD+ T+ LI+G +N+G
Sbjct: 174 SMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSG 233
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
+ ++ K +I N F+ A++ K +L+E ++K M P+ TY
Sbjct: 234 RWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYN 293
Query: 454 IMIEAYRKEG 463
+I + G
Sbjct: 294 SLINGFCIHG 303
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 142/333 (42%), Gaps = 5/333 (1%)
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
+F + E G P+ TY L+ Y + + +A + MK + + ++ TYS +I
Sbjct: 471 VFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGV-KHNLKTYSMMINGF 529
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
V + ++EDM + P+ + N ++S + G D+ + + M + +P
Sbjct: 530 VKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM-QKLRHRPT 588
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
T II + G + + ++ R G P TFN LI +KR +K +++
Sbjct: 589 TRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILD 648
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGD-AKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
M TY +++ + VGD K EY F +++ EG+ D T+ L+ +
Sbjct: 649 EMTLAGVSANEHTYTKIMQGYASVGDTGKAFEY-FTRLQNEGLDVDIFTYEALLKACCKS 707
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G ++ + I N+ YN ++ + D+ E + ++MK PD TY
Sbjct: 708 GRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTY 767
Query: 453 TIMIEAYRKEG-MNDKIYYLEQEKKTMITDGIK 484
T I A K G MN +E+ + + IK
Sbjct: 768 TSFISACSKAGDMNRATQTIEEMEALGVKPNIK 800
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/374 (23%), Positives = 159/374 (42%), Gaps = 12/374 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ L VF LKE F P TY LI L K G+ +A ++ M EEG + +TY+ +
Sbjct: 467 KGLVVFKRLKECGF-TPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMM 525
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ + + AF++ +M + +PDV Y+ +I D ++M
Sbjct: 526 INGFVKLKDWANAFAVFEDMVKEGM-KPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLR 584
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
P T T ++ GY K+G + +V M+ C P V T N +I+ Q++
Sbjct: 585 HRPTTRTFMPIIHGYAKSGDMRRSLEVFD-MMRRCGCVPTVHTFNGLINGLVEKRQMEKA 643
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ---FPWTTSTYNNV 350
+ ++ G+ T+ ++ Y EY +LQ TY +
Sbjct: 644 VEILDEMTLAGVSANEHTYTKIMQGYAS---VGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
++A G ++ +M A + +S + LI+G+A G + +Q +K +
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGV 760
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYY 470
+ Y + +SAC+KA D+ + + M+ P+ TYT +I+ + + + +K
Sbjct: 761 KPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALS 820
Query: 471 LEQEKKTMITDGIK 484
+E K M GIK
Sbjct: 821 CYEEMKAM---GIK 831
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/347 (21%), Positives = 138/347 (39%), Gaps = 7/347 (2%)
Query: 112 WLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
W + F+ + + P + ++ G+ G HRAR+ F M G P+ YT
Sbjct: 294 WQAVISAFEKISK-----PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYT 348
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
+L+ AY +DEA S + +MK + + + TYS ++ A + + +++
Sbjct: 349 SLIHAYAVGRDMDEALSCVRKMKEEGI-EMSLVTYSVIVGGFSKAGHAEAADYWFDEAKR 407
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
N ++ + + ++ E ++ M E P + +T++ + +
Sbjct: 408 IHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAP-IAIYHTMMDGYTMVADEK 466
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+++ + G P T+ LI Y K K V M++ TY+ +I
Sbjct: 467 KGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMI 526
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
F + D N F+ M EGMK D + +I+ F G + I TV+ +K
Sbjct: 527 NGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHR 586
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
T + ++ K+ D+ VF M+ C P T+ +I
Sbjct: 587 PTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLING 633
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/327 (21%), Positives = 139/327 (42%), Gaps = 5/327 (1%)
Query: 107 IEKKQWLQALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDP 165
++ K W A VF DM+KE +P Y +I G RA Q M + P
Sbjct: 530 VKLKDWANAFAVFEDMVKEG--MKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP 587
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELL 225
+ T+ ++ Y +S + + + + M+ C P V T++ LI V+ + + +
Sbjct: 588 TTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCG-CVPTVHTFNGLINGLVEKRQMEKAVEI 646
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG 285
++M + N T ++ GY G + + + L++ D++T ++
Sbjct: 647 LDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTR-LQNEGLDVDIFTYEALLKACC 705
Query: 286 NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
G++ ++ I + +NILI + ++ + + +++ M+K
Sbjct: 706 KSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIH 765
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
TY + I A + GD T ++M A G+K + KT+ LI G+A A L K +S +
Sbjct: 766 TYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEM 825
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLME 432
+ I + Y+ +L++ + E
Sbjct: 826 KAMGIKPDKAVYHCLLTSLLSRASIAE 852
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 5/230 (2%)
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
D + V+S+ E S KP ++ +G G + + +E+ R GI P +R +
Sbjct: 292 DNWQAVISA-FEKIS-KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTS 349
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
LI AY R D+ + + M++ + TY+ ++ F+ G A+ +Y FD+ +
Sbjct: 350 LIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIH 409
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
++ + +I + + V+ E+ I Y+ ++ T D +
Sbjct: 410 KTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGL 469
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIK 484
VFKR+K+ P TY +I Y K G KI + + M +G+K
Sbjct: 470 VVFKRLKECGFTPTVVTYGCLINLYTKVG---KISKALEVSRVMKEEGVK 516
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 97/242 (40%), Gaps = 1/242 (0%)
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG 285
+E M AR I P + ++ Y D+ + M E + + T + I+ F
Sbjct: 332 FERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEE-GIEMSLVTYSVIVGGFS 390
Query: 286 NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
G + + W+++ + + +I A+ + ++ ++ M + +
Sbjct: 391 KAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIA 450
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
Y+ +++ +T V D K F +++ G T+ CLIN + G K + ++
Sbjct: 451 IYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVM 510
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
++ + N Y+ +++ K +D VF+ M PD Y +I A+ G
Sbjct: 511 KEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNM 570
Query: 466 DK 467
D+
Sbjct: 571 DR 572
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 162/371 (43%), Gaps = 7/371 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y P ++ ++ + K GQ A + +M GC+P +Y +L+ +CR+ + A
Sbjct: 52 YTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDIRSAS 111
Query: 188 SILNEMK-NHP-LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVL 245
+L ++ +H +C+PD+ ++++L D V +Y + + PN VT + +
Sbjct: 112 LVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEV-FVYMGVMLKCCSPNVVTYSTWI 170
Query: 246 SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGI 305
+ K+G+ K SM + + P+V T +I + G +++ Y++ R +
Sbjct: 171 DTFCKSGELQLALKSFHSM-KRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRM 229
Query: 306 EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEY 365
T+ LI + KK + + M + + + Y +I+ F GD+ N
Sbjct: 230 SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMK 289
Query: 366 TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
+M +GM+ D + +I+G G + V+ EK ++ + + +++A
Sbjct: 290 FLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDMVIFTTMMNAYF 349
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYY--LEQEKKTMITDG 482
K+ + ++ ++ + PD + MI+ K G +++ I Y +E+ M T
Sbjct: 350 KSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCIEKANDVMYTVL 409
Query: 483 IKVSQPEDEFF 493
I E +F
Sbjct: 410 IDALCKEGDFI 420
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 128/301 (42%), Gaps = 7/301 (2%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
C P+ TY+ + +C+S L A + MK L P+V T++ LI A ++
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDAL-SPNVVTFTCLIDGYCKAGDLEVA 217
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
LY++M + N VT ++ G+ K G+ + E++ S M+E +P+ TII
Sbjct: 218 VSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVED-RVEPNSLVYTTIID 276
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
F G D K+ K N G+ + + ++I + + ++E M K
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
+ ++ A+ G K + ++ G + D +I+G A G H+ I
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 403 QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+ + N Y ++ A K D +E+ER+F ++ + PD YT I K+
Sbjct: 397 CIEKA-----NDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQ 451
Query: 463 G 463
G
Sbjct: 452 G 452
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 129/288 (44%), Gaps = 6/288 (2%)
Query: 182 LLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
++ EA L+ ++ PD FT + I +++ L + +R P+ +
Sbjct: 1 MVREALQFLSRLRKSS-NLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSF 59
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N V+S K G+ E ++ SM C+PDV + N++I G I E R
Sbjct: 60 NSVVSFVCKLGQVKFAEDIVHSM-PRFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLR 118
Query: 302 ---NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
F +P+ +FN L + K +M D++ M M K P TY+ I+ F G
Sbjct: 119 ASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKCCSP-NVVTYSTWIDTFCKSG 177
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
+ + +F M+ + + + TF CLI+G+ AG +S + + ++ N Y
Sbjct: 178 ELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYT 237
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
A++ K ++ E ++ RM +++ P+ YT +I+ + + G +D
Sbjct: 238 ALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSD 285
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 146/368 (39%), Gaps = 40/368 (10%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY I KSG+ A + F +M + P+ T+T L+ YC++ L+ A S+
Sbjct: 161 PNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSL 220
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
EM+ + +V TY+ LI + E +Y M + PN++ ++ G+
Sbjct: 221 YKEMRRVRM-SLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFF 279
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ G D K L+ ML + + D+ IIS G++ + E + P+
Sbjct: 280 QRGDSDNAMKFLAKML-NQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVPDM 338
Query: 310 RTFNILIGAYGKK-------RMYDKM------------STVMEYMRK--------LQFPW 342
F ++ AY K MY K+ ST+++ + K + F
Sbjct: 339 VIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYFCI 398
Query: 343 TTST---YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG----LF 395
+ Y +I+A GD +E F ++ G+ D + I G G F
Sbjct: 399 EKANDVMYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSWIAGLCKQGNLVDAF 458
Query: 396 HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
VQ ++ TT + S ++E +VF M ++ PD + ++
Sbjct: 459 KLKTRMVQEGLLLDLLAYTTLIYGLASKGL----MVEARQVFDEMLNSGISPDSAVFDLL 514
Query: 456 IEAYRKEG 463
I AY KEG
Sbjct: 515 IRAYEKEG 522
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/375 (21%), Positives = 159/375 (42%), Gaps = 8/375 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVL--LGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
+AL++FD SF ++ +L L K G+ A +L + M G P+ +Y
Sbjct: 427 EALKLFD----ESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYN 482
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
++ +CR +D A + + + L +P+ +TYS LI C + M +
Sbjct: 483 NVMLGHCRQKNMDLARIVFSNILEKGL-KPNNYTYSILIDGCFRNHDEQNALEVVNHMTS 541
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
+I N V +++G K G+ + ++L++M+E + N+II F G++D
Sbjct: 542 SNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMD 601
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
YE+ GI P T+ L+ K D+ + + M+ Y +I
Sbjct: 602 SAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALI 661
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
+ F + ++ F ++ EG+ + LI+GF N G + + K +
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLR 721
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
+ Y ++ K +L+ ++ M+ PD+ YT+++ K+G K+ +
Sbjct: 722 CDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 472 -EQEKKTMITDGIKV 485
E+ KK +T + +
Sbjct: 782 FEEMKKNNVTPNVLI 796
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/360 (21%), Positives = 145/360 (40%), Gaps = 46/360 (12%)
Query: 140 VLLGKSGQPHR--ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
V+LG Q + AR +F+ ++E+G P+ TY+ L+ R++ A ++N M +
Sbjct: 484 VMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSN 543
Query: 198 LCQPDVFTYSTLI-----------------------KPCV---------DAF----KFDL 221
+ + + Y T+I + CV D F + D
Sbjct: 544 I-EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDS 602
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
YE+M I PN +T +++G K + DQ ++ M ++ K D+ +I
Sbjct: 603 AVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM-KNKGVKLDIPAYGALI 661
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL--- 338
F ++ + + G+ P +N LI + R M ++ +K+
Sbjct: 662 DGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF---RNLGNMVAALDLYKKMLKD 718
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
TY +I+ G+ + +M+A G+ D + ++NG + G F KV
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ + +K + N YNAV++ + +L E R+ M D PD T+ I++
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILVSG 838
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 124/311 (39%), Gaps = 39/311 (12%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE------------ 161
ALEV + + + E Y +I L K GQ +AR+L MIEE
Sbjct: 531 NALEVVNHMTSSNI-EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNS 589
Query: 162 ------------------------GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
G P+ TYT+L+ C++N +D+A + +EMKN
Sbjct: 590 IIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKG 649
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ + D+ Y LI + L+ ++ + P+ N ++SG+ G
Sbjct: 650 V-KLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAA 708
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+ ML+ + D+ T T+I G + + + Y + + G+ P+ + +++
Sbjct: 709 LDLYKKMLKD-GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVN 767
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
KK + K+ + E M+K YN VI G+ D+M +G+
Sbjct: 768 GLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILP 827
Query: 378 DSKTFCCLING 388
D TF L++G
Sbjct: 828 DGATFDILVSG 838
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/414 (20%), Positives = 155/414 (37%), Gaps = 78/414 (18%)
Query: 147 QPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTY 206
+P A ++ + IE G +P Y+ + A C++ L A S+L EMK LC P TY
Sbjct: 248 KPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETY 307
Query: 207 STLIKPCV------DAFKF---------------------------DLVE--LLYEDMAA 231
+++I V DA + DLV +L++ M
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS--SMLESTSCKPDVWTMNTII-------- 281
PN+VT ++++ + K G +MEK L +E P V+ ++TII
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNG---EMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQK 424
Query: 282 --------------------------SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL 315
S G+ D + K + GI P ++N +
Sbjct: 425 HEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNV 484
Query: 316 IGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
+ + +++ D V + + TY+ +I+ D +N + M + +
Sbjct: 485 MLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNI 544
Query: 376 KADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
+ + + +ING G K + + E+ + + YN+++ K ++
Sbjct: 545 EVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAV 604
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQP 488
++ M N P+ TYT ++ K D+ + E K G+K+ P
Sbjct: 605 AAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK---NKGVKLDIP 655
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ----FPWTTSTY 347
++ K + ++FG E +R FN L+ AY K R D ++ M +L FP+ T
Sbjct: 146 LVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTL 205
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+ +++ + +AK + + +M A G+ D+ T L+ + + + A +
Sbjct: 206 SALVQR-NSLTEAKEL---YSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIE 261
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ-CPPDDTTYTIMIEAYRKEGMND 466
++ Y+ + AC K DL + + MK+ + C P TYT +I A K+G D
Sbjct: 262 RGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMD 321
Query: 467 KIYYLEQEKKTMITDGIKVS 486
L+ E M++DGI ++
Sbjct: 322 DAIRLKDE---MLSDGISMN 338
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 141/324 (43%), Gaps = 21/324 (6%)
Query: 150 RARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTL 209
RA L I G P TY L+ Y R +DEA+++ M+ + +PDV TY++L
Sbjct: 31 RAETLLIDGIRLGVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMREAGI-EPDVTTYNSL 89
Query: 210 IKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
I + V L+++M + P+ + N ++S Y K G+ + K+L +
Sbjct: 90 ISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAG 149
Query: 270 CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 329
P + T N ++ G D + ++ ++ ++PE T+NILI K R +
Sbjct: 150 LVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGLCKSRRVGSVD 208
Query: 330 TVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
+M ++K + TY +++ + + F +M+ EG D GF
Sbjct: 209 WMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD---------GF 259
Query: 390 ANAGLFHKVISTVQLAEKFEI----------AENTTFYNAVLSACTKAEDLMEMERVFKR 439
AN + +I T + E +E +++ YN +L+ K +L ++ + +
Sbjct: 260 ANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLEE 319
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG 463
++ PDD T+TI++ G
Sbjct: 320 IEMKGLKPDDYTHTIIVNGLLNIG 343
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 144/336 (42%), Gaps = 7/336 (2%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP TY LI K+ +R QLF M+ G P +Y L++ Y + EAF
Sbjct: 80 EPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFK 139
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
IL+E + P + TY+ L+ + D L++ + +R + P +T NI+++G
Sbjct: 140 ILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHLKSR-VKPELMTYNILINGL 198
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K+ + ++ ++ L+ + P+ T T++ ++ +I+ + + K + G +
Sbjct: 199 CKSRRVGSVDWMMRE-LKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEGYTFD 257
Query: 309 TRTFNILIGAYGKK-RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
++ A K R + + E +R +YN ++ + G+ ++
Sbjct: 258 GFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLL 317
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+++ +G+K D T ++NG N G + + + + N ++ KA
Sbjct: 318 EEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKA 377
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ R+F M+ D+ TYT ++ K+G
Sbjct: 378 GHVDRAMRLFASME----VRDEFTYTSVVHNLCKDG 409
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 11/196 (5%)
Query: 104 SERIEKKQWLQALEVFDMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE 161
S R+ W M++E S Y P TY ++ + K+ + + QLF M +E
Sbjct: 201 SRRVGSVDW--------MMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKE 252
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
G A+++A ++ +EA+ ++E+ D+ +Y+TL+ D
Sbjct: 253 GYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDA 312
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
V+ L E++ + + P+ T I+++G G EK L+ + E +P V T N +I
Sbjct: 313 VDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGE-MGMQPSVVTCNCLI 371
Query: 282 SVFGNMGQIDMMEKWY 297
G +D + +
Sbjct: 372 DGLCKAGHVDRAMRLF 387
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 153/363 (42%), Gaps = 9/363 (2%)
Query: 121 MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRS 180
+L Y+P +L ++ GKS A L TT C+ +P Y L+ Y R
Sbjct: 121 ILVRARMYDPARHILKELSLMSGKSSFVFGA--LMTTY--RLCNSNPSVYDILIRVYLRE 176
Query: 181 NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVT 240
++ ++ I M + P V+T + ++ V + + V ++M R I P+ T
Sbjct: 177 GMIQDSLEIFRLMGLYGF-NPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVAT 235
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF 300
NI+++ G F++ ++ M E + P + T NT++ + G+ + +
Sbjct: 236 FNILINVLCAEGSFEKSSYLMQKM-EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHM 294
Query: 301 RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA 360
++ G++ + T+N+LI + K ++ MRK TYN +I F++ G
Sbjct: 295 KSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKV 354
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
++M + G+ + TF LI+G + G F + + + E + + Y +
Sbjct: 355 LIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVL 414
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMIT 480
L K + + RMK N TYT MI+ K G D+ L E M
Sbjct: 415 LDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE---MSK 471
Query: 481 DGI 483
DGI
Sbjct: 472 DGI 474
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 161/411 (39%), Gaps = 59/411 (14%)
Query: 97 NTVTEDL--SERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
N + DL S RI K L + DM K P E TY LI G+ A QL
Sbjct: 307 NMLIHDLCRSNRIAKGYLL----LRDMRKR--MIHPNEVTYNTLINGFSNEGKVLIASQL 360
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
M+ G P+ T+ AL+ + EA + M+ L P +Y L+
Sbjct: 361 LNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL-TPSEVSYGVLLDGLC 419
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
+FDL Y M + +T ++ G K G D+ +L+ M PD+
Sbjct: 420 KNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEM-SKDGIDPDI 478
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI------GAYGKK-RMYDK 327
T + +I+ F +G+ ++ + G+ P ++ LI G + R+Y+
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
M ++E + F T+N ++ + G E M ++G+ ++ +F CLIN
Sbjct: 539 M--ILEGHTRDHF-----TFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLIN 591
Query: 388 GFANAGLFHKVIST----------------------------VQLAEKF-------EIAE 412
G+ N+G K S ++ AEKF A
Sbjct: 592 GYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAV 651
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+T YN +L+A K+ +L + +F M PD TYT +I ++G
Sbjct: 652 DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG 702
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 144/352 (40%), Gaps = 4/352 (1%)
Query: 124 EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
E S Y P TY ++ K G+ A +L M +G D TY L+ CRSN +
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
+ + +L +M+ + P+ TY+TLI + K + L +M + + PN VT N
Sbjct: 320 AKGYLLLRDMRKR-MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNA 378
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
++ G+ G F + K+ M+E+ P + ++ + D+ +Y + +
Sbjct: 379 LIDGHISEGNFKEALKMF-YMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRN 437
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G+ T+ +I K D+ ++ M K TY+ +I F VG K
Sbjct: 438 GVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTA 497
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF-YNAVLS 422
+ ++ G+ + + LI G + I + A E F +N +++
Sbjct: 498 KEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE-AMILEGHTRDHFTFNVLVT 556
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
+ KA + E E + M + P+ ++ +I Y G K + + E
Sbjct: 557 SLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/372 (20%), Positives = 135/372 (36%), Gaps = 42/372 (11%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P ++ LI G SG+ +A +F M + G P+ TY +LL C+ L EA
Sbjct: 581 PNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKF 640
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
L + P D Y+TL+ + L+ +M RSI+P++ T ++SG
Sbjct: 641 LKSLHAVP-AAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC 699
Query: 250 KAGK---------------------------FDQMEKV--------LSSMLESTSCKPDV 274
+ GK D M K +++ PD+
Sbjct: 700 RKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDI 759
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
T N +I + MG+I+ + N P T+NIL+ Y K++ +ST
Sbjct: 760 VTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRK---DVSTSFLL 816
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA---EGMKADSKTFCCLINGFAN 391
R + + ++ +E ++A G++ D TF LI+
Sbjct: 817 YRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCA 876
Query: 392 AGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
G + V++ I+ + +A++S + E V M P+
Sbjct: 877 NGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRK 936
Query: 452 YTIMIEAYRKEG 463
Y +I + G
Sbjct: 937 YIGLINGLCRVG 948
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 78/368 (21%), Positives = 139/368 (37%), Gaps = 44/368 (11%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y L+ + KSG +A LF M++ P TYT+L++ CR A E +
Sbjct: 656 YNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAE 715
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
P+ Y+ + A ++ E M P+ VT N ++ GY + GK
Sbjct: 716 ARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKI 775
Query: 255 DQMEKVLSSM---------------LESTSCKPDVWT---------MNTII-------SV 283
++ +L M L S + DV T +N I+ S+
Sbjct: 776 EKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835
Query: 284 FGNMGQIDMMEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF 340
+ + +M+E + + F G+E + TFN+LI + +++ M L
Sbjct: 836 VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK--V 398
T + ++ + +M +G+ +S+ + LING G V
Sbjct: 896 SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955
Query: 399 ISTVQLAEKF---EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+ +A K +AE+ L+ C KA++ + R +MK P ++T +
Sbjct: 956 VKEEMIAHKICPPNVAESAMV--RALAKCGKADEATLLLRFMLKMK---LVPTIASFTTL 1010
Query: 456 IEAYRKEG 463
+ K G
Sbjct: 1011 MHLCCKNG 1018
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/333 (18%), Positives = 128/333 (38%), Gaps = 2/333 (0%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K+GQ M G P T A++ Y R +++ +L EM N P++
Sbjct: 736 KAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQN-GGPNL 794
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
TY+ L+ LLY + I+P+ +T + ++ G ++ + K+L +
Sbjct: 795 TTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKA 854
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
+ + D +T N +IS G+I+ + + GI + T + ++ +
Sbjct: 855 FI-CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNH 913
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+ + V+ M K + Y +I VGD K ++M A + +
Sbjct: 914 RFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAES 973
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
++ A G + ++ K ++ + ++ C K +++E + M +
Sbjct: 974 AMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNC 1033
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
D +Y ++I +G + L +E K
Sbjct: 1034 GLKLDLVSYNVLITGLCAKGDMALAFELYEEMK 1066
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 148/335 (44%), Gaps = 10/335 (2%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y ++ +L K+ +R++ M G +PE ++ ++ +Y R+ L +A +L M
Sbjct: 209 VYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLM 268
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ + +P++ +T I V A + + E M I+PN VT N ++ GY +
Sbjct: 269 QRAGV-EPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHR 327
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI----DMMEKWYEKFRNFGIEPET 309
++ ++L M S C PD + TI+ +I D+M+K + G+ P+
Sbjct: 328 VEEAIELLEDM-HSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMA---KEHGLVPDQ 383
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
T+N LI K D+ ++ ++ F Y+ ++ A G + ++
Sbjct: 384 VTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINE 443
Query: 370 MRAEG-MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M ++G D T+ ++NGF G K +Q+ NT Y A+L+ +
Sbjct: 444 MLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTG 503
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+E + +++ P+ TY++++ R+EG
Sbjct: 504 KSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 148/347 (42%), Gaps = 3/347 (0%)
Query: 118 VFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
V ++K Y E + +++V ++GQ A ++ T M G +P+ + +
Sbjct: 229 VLVLMKRRGIYRTPEA-FSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVF 287
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN 237
R+N L++A L M+ + P+V TY+ +I+ D + + L EDM ++ +P+
Sbjct: 288 VRANRLEKALRFLERMQVVGIV-PNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPD 346
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWY 297
V+ ++ K + ++ ++ M + PD T NT+I + D +
Sbjct: 347 KVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFL 406
Query: 298 EKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD 356
+ + G + ++ ++ A K+ RM + + E + K P TY V+ F
Sbjct: 407 KDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCR 466
Query: 357 VGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF 416
+G+ + M G K ++ ++ L+NG G + + ++E+ + N+
Sbjct: 467 LGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSIT 526
Query: 417 YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
Y+ ++ + L E V + M P +++++ ++G
Sbjct: 527 YSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDG 573
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 144/362 (39%), Gaps = 26/362 (7%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG-CDPSPETYTA 172
+AL +E F K G Y ++ L K G+ A+ L M+ +G C P TYTA
Sbjct: 401 EALWFLKDAQEKGFRIDKLG-YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTA 459
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
++ +CR +D+A +L M H +P+ +Y+ L+ K + AR
Sbjct: 460 VVNGFCRLGEVDKAKKLLQVMHTHGH-KPNTVSYTALLNGMCRTGK---------SLEAR 509
Query: 233 SIM---------PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISV 283
+M PN++T ++++ G + GK + V+ M+ P +N ++
Sbjct: 510 EMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMV-LKGFFPGPVEINLLLQS 568
Query: 284 FGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT 343
G+ K+ E+ N G F +I + + D +V++ M +
Sbjct: 569 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 628
Query: 344 TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ 403
TY +++ G +M +G+ T+ +I+ + G KV V
Sbjct: 629 VFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMG---KVDDLVA 685
Query: 404 LAEKFEIAENT-TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+ EK + T YN V+ L E + + ++ D T ++E Y K+
Sbjct: 686 ILEKMISRQKCRTIYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKK 745
Query: 463 GM 464
G+
Sbjct: 746 GV 747
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/361 (18%), Positives = 133/361 (36%), Gaps = 40/361 (11%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTL 209
A +L M +GC P +Y ++ C+ + E ++ +M K H L PD TY+TL
Sbjct: 331 AIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLV-PDQVTYNTL 389
Query: 210 IKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
I D +D + + + + ++ K G+ + + +++ ML
Sbjct: 390 IHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGH 449
Query: 270 CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA----------- 318
C PDV T +++ F +G++D +K + G +P T ++ L+
Sbjct: 450 CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAR 509
Query: 319 ----------------------YGKKR---MYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+G +R + + V E + K FP N ++++
Sbjct: 510 EMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEI-NLLLQS 568
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
G ++ +G + F +I+GF +S + +
Sbjct: 569 LCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHAD 628
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKIYYLE 472
Y ++ K + E + K+M P TY +I Y + G ++D + LE
Sbjct: 629 VFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILE 688
Query: 473 Q 473
+
Sbjct: 689 K 689
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/238 (22%), Positives = 103/238 (43%), Gaps = 15/238 (6%)
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
V+ Y +AG+ KVL+ +++ +P++ NT I VF +++ ++ E+ +
Sbjct: 248 VMVSYSRAGQLRDALKVLT-LMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV 306
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG---DA 360
GI P T+N +I R Y + V E + L+ + + + +T +G
Sbjct: 307 GIVPNVVTYNCMI------RGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE 360
Query: 361 KNMEYTFDQMRA----EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF 416
K + D M+ G+ D T+ LI+ + + ++ A++ +
Sbjct: 361 KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG 420
Query: 417 YNAVLSACTKAEDLMEMERVFKRM-KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
Y+A++ A K + E + + M CPPD TYT ++ + + G DK L Q
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 5/177 (2%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY L+ LGK G+ A +L M+ +G DP+P TY ++ YC+ +D+ +IL +M
Sbjct: 631 TYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM 690
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ C+ Y+ +I+ K + + L + + + T ++ GY K G
Sbjct: 691 ISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGV 747
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG-IEPET 309
KV M + + PDV + G++D +K + G I P++
Sbjct: 748 PLSAYKVACRMF-NRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQS 803
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 79/330 (23%), Positives = 141/330 (42%), Gaps = 3/330 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y L+ KSG P +A +L + M E+G P TY L++ YC+ ++ EA S+ + M
Sbjct: 205 VYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRM 264
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ + P++ TY++ I + L+ ++ + N VT ++ GY +
Sbjct: 265 ERSGVA-PNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLIDGYCRMND 322
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
D+ + L ++ES P V T N+I+ G+I + + IEP+ T N
Sbjct: 323 IDEALR-LREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEPDNITCN 381
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
LI AY K V + M + +Y +I F V + +N + M +
Sbjct: 382 TLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAKEELFSMIEK 441
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
G T+ L++GF N ++ ++ EK + + Y ++ K E +
Sbjct: 442 GFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYA 501
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ +F+ M+ D +T M AY + G
Sbjct: 502 KVLFESMEKKGLVGDSVIFTTMAYAYWRTG 531
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/368 (20%), Positives = 150/368 (40%), Gaps = 61/368 (16%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEE--------------GCDPSPE----TYTALLAAYC 178
K+I++L K A QL + + G PE ++ L+ Y
Sbjct: 85 KMILILTKHKHFKTAHQLLDKLAQRELLSSPLVLRSLVGGVSEDPEDVSHVFSWLMIYYA 144
Query: 179 RSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNT 238
++ +++++ + ++++ L +P + + L+ V D V +++ M ++ N
Sbjct: 145 KAGMINDSIVVFEQIRSCGL-KPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLGVVANI 203
Query: 239 VTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYE 298
N+++ K+G ++ EK+LS M E PD++T NT+ISV
Sbjct: 204 HVYNVLVHACSKSGDPEKAEKLLSEM-EEKGVFPDIFTYNTLISV--------------- 247
Query: 299 KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
Y KK M+ + +V + M + TYN+ I F+ G
Sbjct: 248 --------------------YCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREG 287
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
+ F +++ + + A+ T+ LI+G+ + + ++ E + YN
Sbjct: 288 RMREATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYN 346
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK-EGMNDKIYYLEQEKKT 477
++L + + E R+ M + PD+ T +I AY K E M + + KK
Sbjct: 347 SILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAV----KVKKK 402
Query: 478 MITDGIKV 485
MI G+K+
Sbjct: 403 MIESGLKL 410
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/349 (20%), Positives = 144/349 (41%), Gaps = 11/349 (3%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
L++ K+G + + +F + G P + T LL + + L D + I +M
Sbjct: 139 LMIYYAKAGMINDSIVVFEQIRSCGLKPHLQACTVLLNSLVKQRLTDTVWKIFKKMVKLG 198
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ ++ Y+ L+ C + + E L +M + + P+ T N ++S Y K +
Sbjct: 199 VV-ANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVFPDIFTYNTLISVYCKKSMHFEA 257
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
V M E + P++ T N+ I F G++ + + + ++ + T+ LI
Sbjct: 258 LSVQDRM-ERSGVAPNIVTYNSFIHGFSREGRMREATRLFREIKD-DVTANHVTYTTLID 315
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
Y + D+ + E M F TYN+++ + G + +M + ++
Sbjct: 316 GYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMSGKKIEP 375
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKF---EIAENTTFYNAVLSACTKAEDLMEME 434
D+ T LIN + ++S V++ +K + + Y A++ K +L +
Sbjct: 376 DNITCNTLINAYCK---IEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELENAK 432
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL--EQEKKTMITD 481
M + P TY+ +++ + + D+I L E EK+ + D
Sbjct: 433 EELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEFEKRGLCAD 481
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 1/131 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+Y LI K + A++ +MIE+G P TY+ L+ + N DE +L E
Sbjct: 414 SYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF 473
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ LC DV Y LI+ + D ++L+E M + ++ ++V + Y + GK
Sbjct: 474 EKRGLC-ADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRTGK 532
Query: 254 FDQMEKVLSSM 264
+ + M
Sbjct: 533 VTEASALFDVM 543
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/344 (24%), Positives = 148/344 (43%), Gaps = 38/344 (11%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
AR LF M++ G DP+ Y L+ +C+S + EA +L+EM++ L PDVFTY+ LI
Sbjct: 323 ARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNL-SPDVFTYTILI 381
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ L++ M I P++ T N ++ GY K +Q + S M ++
Sbjct: 382 NGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM-TASGV 440
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
+P++ T +T+I + N+ I Y + GI P+ T+ LI A+ K+ +
Sbjct: 441 EPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE------AN 494
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ E +R Y++++EA G+ + TF CL++GF
Sbjct: 495 MKEALR---------LYSDMLEA--------------------GIHPNDHTFACLVDGFW 525
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
G I Q + N + ++ + ++ R F M+ PD
Sbjct: 526 KEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDIC 585
Query: 451 TYTIMIEAYRKEG-MNDKIYYLEQEKKTMITDGIKVSQPEDEFF 493
+Y M++ + +E + D + KT I + V+Q F+
Sbjct: 586 SYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLARFY 629
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 146/360 (40%), Gaps = 8/360 (2%)
Query: 106 RIEKKQWLQALE-VFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
R+ K LQ+ V +L Y LI L + +P +E+
Sbjct: 68 RVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNMSHRLFNALEDIQS 127
Query: 165 P--SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P S ++ L+ + L +EA + EMK C PD +++ V +FD V
Sbjct: 128 PKFSIGVFSLLIMEFLEMGLFEEALWVSREMK----CSPDSKACLSILNGLVRRRRFDSV 183
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ Y+ M +R ++P+ ++ K G + + EK+L M S KP+V+ I
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEM-TSLGIKPNVYIYTIYIL 242
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+++ EK +E + G+ P T++ +I Y K + + + + +
Sbjct: 243 DLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP 302
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
+ +++ F + F M G+ + + CLI+G +G + + +
Sbjct: 303 NVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLL 362
Query: 403 QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
E ++ + Y +++ + + E R+F++MK+ + P TY +I Y KE
Sbjct: 363 SEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKE 422
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 125/339 (36%), Gaps = 10/339 (2%)
Query: 160 EEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKF 219
E C P + ++L R D + M + L PDV Y L + C +
Sbjct: 157 EMKCSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLV-PDVHIYFVLFQCCFKQGLY 215
Query: 220 DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
E L ++M + I PN I + + K ++ EK+ +++ P+++T +
Sbjct: 216 SKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFE-LMKKHGVLPNLYTYSA 274
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ 339
+I + G + Y++ + P F L+ + K R ++ +M K
Sbjct: 275 MIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFG 334
Query: 340 FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVI 399
YN +I G+ +M + + D T+ LING +
Sbjct: 335 VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEAN 394
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
Q + I ++ YN+++ K ++ + + M + P+ T++ +I+ Y
Sbjct: 395 RLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGY 454
Query: 460 -----RKEGMNDKIYYLEQEKKTMITDGIKVSQPEDEFF 493
K M Y E K ++ D + + D F
Sbjct: 455 CNVRDIKAAMG---LYFEMTIKGIVPDVVTYTALIDAHF 490
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 152/327 (46%), Gaps = 9/327 (2%)
Query: 141 LLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ 200
LL + + A Q F M++ G +P +YT L+ R+ + +A I N M +
Sbjct: 123 LLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGV-S 181
Query: 201 PDVFTYSTLIKPCVDAFKFDLV-ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
PD + L+ A K DL E++ E++ + + +TV N ++SG+ KAG+ ++ E
Sbjct: 182 PDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAE- 240
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
L S + C+PD+ T N +++ + + + E + GI+ + ++N L+ +
Sbjct: 241 ALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRH 300
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
+ DK M + + +Y+ +IE F + + F++MR +GM +
Sbjct: 301 CRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNV 360
Query: 380 KTFCCLINGF---ANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
T+ LI F N+ + K++ Q+ E ++ + FY +L K+ ++ + V
Sbjct: 361 VTYTSLIKAFLREGNSSVAKKLLD--QMTE-LGLSPDRIFYTTILDHLCKSGNVDKAYGV 417
Query: 437 FKRMKDNQCPPDDTTYTIMIEAYRKEG 463
F M +++ PD +Y +I + G
Sbjct: 418 FNDMIEHEITPDAISYNSLISGLCRSG 444
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 134/323 (41%), Gaps = 51/323 (15%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
Y + +A +S ++D A + +EM+ H + F Y+ I V +F+L E +Y D
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMR-HSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69
Query: 229 M--AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
M S++P T ++ I SG K KFD ++ +LS M E+ PD+W N + +
Sbjct: 70 MKPMGFSLIPFTYSRFI--SGLCKVKKFDLIDALLSDM-ETLGFIPDIWAFNVYLDLLCR 126
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
++ + + G EP+ ++ ILI
Sbjct: 127 ENKVGFAVQTFFCMVQRGREPDVVSYTILI------------------------------ 156
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV-ISTVQLA 405
N + A G + ++ M G+ D+K L+ G +A KV ++ +A
Sbjct: 157 -NGLFRA----GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHA---RKVDLAYEMVA 208
Query: 406 EKFEIAE---NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
E+ + A +T YNA++S KA + + E + M C PD TY +++ Y
Sbjct: 209 EEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDN 268
Query: 463 GMNDKIYYLEQEKKTMITDGIKV 485
M + E M+ GI++
Sbjct: 269 NMLKRA---EGVMAEMVRSGIQL 288
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 80/167 (47%), Gaps = 9/167 (5%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
+Y+ L+ +CR++ +A+ + EM+ + +V TY++LIK + + + L +
Sbjct: 327 SYSTLIETFCRASNTRKAYRLFEEMRQKGMVM-NVVTYTSLIKAFLREGNSSVAKKLLDQ 385
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
M + P+ + +L K+G D+ V + M+E PD + N++IS G
Sbjct: 386 MTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEH-EITPDAISYNSLISGLCRSG 444
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAY--GKK-----RMYDKM 328
++ K +E + P+ TF +IG GKK +++D+M
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQM 491
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 112/268 (41%), Gaps = 37/268 (13%)
Query: 142 LGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP 201
L K G A+ LFT M E+G P+ TY ++ ++C S +A +L M + P
Sbjct: 20 LCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQI-NP 78
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
D+ T+S LI V K E +Y++M SI P T+T N ++ G+ K + D +++L
Sbjct: 79 DIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRML 138
Query: 262 SSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK 321
SM S C PDV T F+ LI Y K
Sbjct: 139 DSM-ASKGCSPDVVT-----------------------------------FSTLINGYCK 162
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
+ D + M + T TY +I F VGD + ++M + G+ D T
Sbjct: 163 AKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYIT 222
Query: 382 FCCLINGFANAGLFHKVISTVQLAEKFE 409
F C++ G + K + ++ +K E
Sbjct: 223 FHCMLAGLCSKKELRKAFAILEDLQKSE 250
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 104/225 (46%), Gaps = 3/225 (1%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
+ A +F + E + P TY +I SG+ A QL MIE+ +P T++A
Sbjct: 27 INAQNLFTEMHEKGIF-PNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQINPDIVTFSA 85
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ A+ + + EA I EM + P TY+++I + D + + + MA++
Sbjct: 86 LINAFVKERKVSEAEEIYKEMLRWSI-FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASK 144
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
P+ VT + +++GY KA + D ++ M + T T+I F +G +D
Sbjct: 145 GCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM-HRRGIVANTVTYTTLIHGFCQVGDLDA 203
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
+ + + G+ P+ TF+ ++ K+ K ++E ++K
Sbjct: 204 AQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQK 248
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 2/161 (1%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
+++++ +A E++ + S + P TY +I K + A+++ +M +GC P
Sbjct: 91 VKERKVSEAEEIYKEMLRWSIF-PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPD 149
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
T++ L+ YC++ +D I EM + V TY+TLI D + L
Sbjct: 150 VVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTV-TYTTLIHGFCQVGDLDAAQDLL 208
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
+M + + P+ +T + +L+G + + +L + +S
Sbjct: 209 NEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDLQKS 249
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/378 (24%), Positives = 155/378 (41%), Gaps = 43/378 (11%)
Query: 114 QALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
+A +VF DM K H E TY +I +G+ G+ A LF MI EG + Y
Sbjct: 253 KACQVFEDMKKRHC--RRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNT 310
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV---DAFKFD-LVEL---- 224
L+ + ++D+A + + M C+P+ +TYS L+ V + D +VE+
Sbjct: 311 LMQVLAKGKMVDKAIQVFSRMVETG-CRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRY 369
Query: 225 ------------------------LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKV 260
L+ DM + + + +L AGK + ++
Sbjct: 370 MTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEM 429
Query: 261 LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
LS + E D NT+ S G + QI + +EK + G P+ T+NILI ++G
Sbjct: 430 LSKIHEK-GVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFG 488
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
+ D+ + E + + +YN++I GD F +M+ +G+ D
Sbjct: 489 RVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDVV 548
Query: 381 TFCCLINGFANAGLFHKVISTVQLAEKFEI---AENTTFYNAVLSACTKAEDLMEMERVF 437
T+ L+ F G +V L E+ + N YN +L K E ++
Sbjct: 549 TYSTLMECF---GKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLY 605
Query: 438 KRMKDNQCPPDDTTYTIM 455
+MK PD TYT++
Sbjct: 606 SKMKQQGLTPDSITYTVL 623
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 135/305 (44%), Gaps = 20/305 (6%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMK--NHPLCQPDVFTYSTLIKPCVDAFKFDLVEL-L 225
TY LL AY RS +AF + E++ H L D+F Y+ L+ DA D +
Sbjct: 205 TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKL---DIFAYNMLL----DALAKDEKACQV 257
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG 285
+EDM R + T I++ G+ GK D+ + + M+ + +V NT++ V
Sbjct: 258 FEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMI-TEGLTLNVVGYNTLMQVLA 316
Query: 286 NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
+D + + + G P T+++L+ + ++ V+E ++ T
Sbjct: 317 KGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYM---TQG 373
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
Y+ ++ + +G F M + +K + ++ ++ AG K I +++
Sbjct: 374 IYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAG---KTIEAIEML 430
Query: 406 EKFE---IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
K + +T YN V SA K + + + +F++MK + PD TY I+I ++ +
Sbjct: 431 SKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRV 490
Query: 463 GMNDK 467
G D+
Sbjct: 491 GEVDE 495
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 131/306 (42%), Gaps = 37/306 (12%)
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCV--DAFKFDLVELLYEDMAARSIMPNTVTQ 241
DEA IL + N PL + F + P D F ++ + L+ +RS +P+
Sbjct: 100 DEASEILKSL-NSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILIL----SRSNLPD---- 150
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM----MEKWY 297
+FD++ +L SM++S + ++ T+N +I FGN + M ++KW
Sbjct: 151 -----------RFDRVRSILDSMVKS-NVHGNISTVNILIGFFGNTEDLQMCLRLVKKWD 198
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
K +F T+ L+ AY + R Y K V +R+ YN +++A
Sbjct: 199 LKMNSF-------TYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAK- 250
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFY 417
D K + F+ M+ + D T+ +I G + + + N Y
Sbjct: 251 -DEKACQ-VFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGY 308
Query: 418 NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
N ++ K + + + +VF RM + C P++ TY++++ EG ++ + + K
Sbjct: 309 NTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKR 368
Query: 478 MITDGI 483
+T GI
Sbjct: 369 YMTQGI 374
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 3/171 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
KQ ++F+ +K+ P TY LI G+ G+ A +F + C P +
Sbjct: 456 KQISHIHDLFEKMKKDG-PSPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIIS 514
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
Y +L+ ++ +DEA EM+ L PDV TYSTL++ + ++ L+E+M
Sbjct: 515 YNSLINCLGKNGDVDEAHVRFKEMQEKGL-NPDVVTYSTLMECFGKTERVEMAYSLFEEM 573
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 280
+ PN VT NI+L K G+ + + S M + PD T +
Sbjct: 574 LVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSKM-KQQGLTPDSITYTVL 623
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 159/380 (41%), Gaps = 24/380 (6%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYM--KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
ALE+F+ SF +M K+ +L K G+ A M ++G +P+ Y
Sbjct: 434 ALEIFN----DSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNN 489
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF--------KFDLVEL 224
++ A+CR +D A SI +EM L +P+ FTYS LI D F +D++
Sbjct: 490 MMLAHCRMKNMDLARSIFSEMLEKGL-EPNNFTYSILI----DGFFKNKDEQNAWDVIN- 543
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
M A + N V N +++G K G+ + +++L ++++ + N+II F
Sbjct: 544 ---QMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGF 600
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+G D + Y + G P TF LI + K D + M+ ++
Sbjct: 601 VKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDL 660
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
Y +I+ F D K F ++ G+ + + LI+GF N G I +
Sbjct: 661 PAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKK 720
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
I+ + Y ++ K ++ ++ + D PD+ + +++ K+G
Sbjct: 721 MVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 465 NDKIY-YLEQEKKTMITDGI 483
K LE+ KK +T +
Sbjct: 781 FLKASKMLEEMKKKDVTPNV 800
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 122/279 (43%), Gaps = 4/279 (1%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
Q +A E+ L + Y +Y +I K G A + + M E G P+ T+
Sbjct: 569 QTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTF 628
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
T+L+ +C+SN +D A + +EMK+ L + D+ Y LI L+ ++
Sbjct: 629 TSLINGFCKSNRMDLALEMTHEMKSMEL-KLDLPAYGALIDGFCKKNDMKTAYTLFSELP 687
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML-ESTSCKPDVWTMNTIISVFGNMGQ 289
+MPN N ++SG+ GK D + M+ + SC D++T T+I G
Sbjct: 688 ELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISC--DLFTYTTMIDGLLKDGN 745
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
I++ Y + + GI P+ +L+ KK + K S ++E M+K Y+
Sbjct: 746 INLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYST 805
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING 388
VI G+ D+M +G+ D F L++G
Sbjct: 806 VIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFNLLVSG 844
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 154/367 (41%), Gaps = 4/367 (1%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
+ AL++ ++ + TY +IV K G A ++ M+ G S T+
Sbjct: 291 VMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATS 350
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ YC+ N L +A + N M+ L PD +S +++ + + Y M +
Sbjct: 351 LVNGYCKGNELGKALDLFNRMEEEGLA-PDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
I P++V + ++ G KA + ++ + ES + N I +F G++D
Sbjct: 410 RIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHG--FMCNKIFLLFCKQGKVDA 467
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+ + GIEP +N ++ A+ + + D ++ M + TY+ +I+
Sbjct: 468 ATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILID 527
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-LAEKFEIA 411
F D +N +QM A +A+ + +ING G K +Q L ++ +
Sbjct: 528 GFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYS 587
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
+ T YN+++ K D ++ M +N P+ T+T +I + K D +
Sbjct: 588 MSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEM 647
Query: 472 EQEKKTM 478
E K+M
Sbjct: 648 THEMKSM 654
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/376 (19%), Positives = 160/376 (42%), Gaps = 6/376 (1%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
K+ + A F + E EP Y +++ + AR +F+ M+E+G +P+
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYE 227
TY+ L+ + ++ A+ ++N+M N + + Y+T+I C E+L
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQM-NASNFEANEVIYNTIINGLCKVGQTSKAKEMLQN 579
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+ + + + N ++ G+ K G D + M E+ P+V T ++I+ F
Sbjct: 580 LIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGK-SPNVVTFTSLINGFCKS 638
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
++D+ + + ++ ++ + + LI + KK T+ + +L S Y
Sbjct: 639 NRMDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVY 698
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
N++I F ++G + +M +G+ D T+ +I+G G +
Sbjct: 699 NSLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLD 758
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
I + + +++ +K ++ ++ + MK P+ Y+ +I + +EG ++
Sbjct: 759 LGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Query: 468 IYYLEQEKKTMITDGI 483
+ L E M+ GI
Sbjct: 819 AFRLHDE---MLEKGI 831
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 88/189 (46%), Gaps = 2/189 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y LI K A LF+ + E G P+ Y +L++ + +D A + +M
Sbjct: 662 AYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKM 721
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
N + D+FTY+T+I + +L LY ++ I+P+ + ++++G K G+
Sbjct: 722 VNDGI-SCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQ 780
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
F + K+L M + P+V +T+I+ G ++ + +++ GI + FN
Sbjct: 781 FLKASKMLEEM-KKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVHDDTVFN 839
Query: 314 ILIGAYGKK 322
+L+ +K
Sbjct: 840 LLVSGRVEK 848
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 153/328 (46%), Gaps = 7/328 (2%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
KL+ +L + G+PH A+ +F T+ E G PS +YT LLAA SI++E++
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 197 PLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFD 255
+F ++ +I ++ D V+ L + M + P T T N ++ GYG AGK +
Sbjct: 110 GTKLDSIF-FNAVINAFSESGNMEDAVQALLK-MKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 256 QMEKVLSSMLE--STSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ ++L MLE + P++ T N ++ + +++ + +K G+ P+T T+N
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 314 ILIGAYGKK-RMYDKMSTVMEYM-RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+ Y +K S V+E M K + T V+ + G ++ +M+
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK 287
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
++A+ F LINGF + + L ++ + + Y+ V++A + A +
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYME 347
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+ +VFK M PD Y+I+ + Y
Sbjct: 348 KAAQVFKEMVKAGVKPDAHAYSILAKGY 375
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/379 (21%), Positives = 170/379 (44%), Gaps = 18/379 (4%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
N V SE + +QAL +KE P TY LI G +G+P R+ +L
Sbjct: 119 NAVINAFSESGNMEDAVQALL---KMKELGL-NPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 157 TMIEEG---CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
M+EEG P+ T+ L+ A+C+ ++EA+ ++ +M+ + +PD TY+T+
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGV-RPDTVTYNTIATCY 233
Query: 214 VDA-----FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLEST 268
V + ++VE + A+ PN T IV+ GY + G+ + + M E
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAK---PNGRTCGIVVGGYCREGRVRDGLRFVRRMKE-M 289
Query: 269 SCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKM 328
+ ++ N++I+ F + D +++ + ++ + T++ ++ A+ +K
Sbjct: 290 RVEANLVVFNSLINGFVEVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKA 349
Query: 329 STVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING 388
+ V + M K Y+ + + + + K E + + E + + F +I+G
Sbjct: 350 AQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISG 408
Query: 389 FANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPD 448
+ + G + KF ++ N + ++ + + + E V + M+ P+
Sbjct: 409 WCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPE 468
Query: 449 DTTYTIMIEAYRKEGMNDK 467
++T+ ++ EA+R G+ D+
Sbjct: 469 NSTFLLLAEAWRVAGLTDE 487
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 153 QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP 212
++ T M E TY+ ++ A+ + +++A + EM + +PD YS L K
Sbjct: 316 EVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV-KPDAHAYSILAKG 374
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
V A + E L E + S PN V V+SG+ G D +V + M + P
Sbjct: 375 YVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK-FGVSP 432
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
++ T T++ + + Q E+ + R G++PE TF +L A+ + D+ + +
Sbjct: 433 NIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI 492
Query: 333 EYMR 336
++
Sbjct: 493 NALK 496
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 4/298 (1%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
CD +P + +L + A +MK++ P V + + + + + D+
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL-PTVESCNAYMSSLLGQGRVDIA 222
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
Y +M I PN T N+V+SGY ++GK D+ ++L M E + + NT+I+
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIA 281
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
G + K G++P TFN LI + + + S V M+ +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
T TYN +I ++ GD + ++ M G++ D T+ LI G K V
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 403 QLAEKFEIAENTTFYNA-VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+ +K + N++ ++A ++ C + E ++K M + C P++ T+ +++ A+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFE-LYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+SG+ + +L M G + +Y L+A +C LL A + N M L QP+V
Sbjct: 250 RSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL-QPNV 308
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
T++TLI A K ++ +M A ++ PNTVT N +++GY + G + +
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M+ + D+ T N +I + ++ ++ + P + TF+ LI ++
Sbjct: 369 MV-CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
D+ + + M + T+N ++ AF D +M + DS+T
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Query: 384 CLINGFANAG 393
+ NG + G
Sbjct: 488 QVCNGLKHQG 497
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 131/298 (43%), Gaps = 4/298 (1%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
CD +P + +L + A +MK++ P V + + + + + D+
Sbjct: 164 CDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFL-PTVESCNAYMSSLLGQGRVDIA 222
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
Y +M I PN T N+V+SGY ++GK D+ ++L M E + + NT+I+
Sbjct: 223 LRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM-ERLGFRATDVSYNTLIA 281
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
G + K G++P TFN LI + + + S V M+ +
Sbjct: 282 GHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAP 341
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
T TYN +I ++ GD + ++ M G++ D T+ LI G K V
Sbjct: 342 NTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFV 401
Query: 403 QLAEKFEIAENTTFYNA-VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+ +K + N++ ++A ++ C + E ++K M + C P++ T+ +++ A+
Sbjct: 402 KELDKENLVPNSSTFSALIMGQCVRKNADRGFE-LYKSMIRSGCHPNEQTFNMLVSAF 458
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 108/250 (43%), Gaps = 2/250 (0%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+SG+ + +L M G + +Y L+A +C LL A + N M L QP+V
Sbjct: 250 RSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGL-QPNV 308
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
T++TLI A K ++ +M A ++ PNTVT N +++GY + G + +
Sbjct: 309 VTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYED 368
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M+ + D+ T N +I + ++ ++ + P + TF+ LI ++
Sbjct: 369 MV-CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRK 427
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
D+ + + M + T+N ++ AF D +M + DS+T
Sbjct: 428 NADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVH 487
Query: 384 CLINGFANAG 393
+ NG + G
Sbjct: 488 QVCNGLKHQG 497
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 114/275 (41%), Gaps = 37/275 (13%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y +I L K G A+ LFT M ++G P TY+ ++ ++CRS +A +L +M
Sbjct: 79 YNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTDAEQLLRDMI 138
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
+ PDV T+S LI V K E +Y DM R I P T+T N ++ G+ K +
Sbjct: 139 ERQI-NPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMIDGFCKQDRL 197
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
+ +++L SM S SC PDV TF+
Sbjct: 198 NDAKRMLDSM-ASKSCSPDVV-----------------------------------TFST 221
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
LI Y K + D + M + T TY +I F VGD + + M + G
Sbjct: 222 LINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSG 281
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+ + TF ++ + K + ++ +K E
Sbjct: 282 VAPNYITFQSMLASLCSKKELRKAFAILEDLQKSE 316
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/317 (23%), Positives = 143/317 (45%), Gaps = 13/317 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T+ L+ L G+ +A L M+EEG P Y ++ C+ + A ++
Sbjct: 8 PDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNL 63
Query: 190 LNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L++M+ + + V Y+ +I + C D + L+ +M + I P+ +T + ++ +
Sbjct: 64 LSKMEETHI-KAHVVIYNAIIDRLCKDGHHIH-AQNLFTEMHDKGIFPDVITYSGMIDSF 121
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
++G++ E++L M+E PDV T + +I+ G++ E+ Y GI P
Sbjct: 122 CRSGRWTDAEQLLRDMIER-QINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPT 180
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T T+N +I + K+ + +++ M T++ +I + N F
Sbjct: 181 TITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFC 240
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN-TTFYNAVLSACTKA 427
+M G+ A++ T+ LI+GF G + + +A N TF + + S C+K
Sbjct: 241 EMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKK 300
Query: 428 EDLMEMERVFKRMKDNQ 444
E+ + F ++D Q
Sbjct: 301 ----ELRKAFAILEDLQ 313
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 42/264 (15%)
Query: 199 CQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
C+PDV T++TL+ C + + L+ + M P +++G K G +
Sbjct: 6 CRPDVVTFTTLMNGLCCEGRVLQALALV-DRMVEEGHQP----YGTIINGLCKMGDTESA 60
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+LS M E T K V N II G + + + + GI P+ T++ +I
Sbjct: 61 LNLLSKM-EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMID 119
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
++ + + ++ M + Q T++ +I A G E + M G+
Sbjct: 120 SFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFP 179
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
+ T+ +I+GF K + L + +R+
Sbjct: 180 TTITYNSMIDGFC-----------------------------------KQDRLNDAKRML 204
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRK 461
M C PD T++ +I Y K
Sbjct: 205 DSMASKSCSPDVVTFSTLINGYCK 228
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 9/202 (4%)
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
T C+PDV T T+++ G++ ++ G +P N G +M D
Sbjct: 4 TGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQPYGTIIN------GLCKMGDT 57
Query: 328 MSTV--MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
S + + M + YN +I+ G + + F +M +G+ D T+ +
Sbjct: 58 ESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGM 117
Query: 386 INGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
I+ F +G + ++ + +I + ++A+++A K + E E ++ M
Sbjct: 118 IDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGI 177
Query: 446 PPDDTTYTIMIEAY-RKEGMND 466
P TY MI+ + +++ +ND
Sbjct: 178 FPTTITYNSMIDGFCKQDRLND 199
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 156/366 (42%), Gaps = 39/366 (10%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
T+ LI L GK+G+ + A LF+ M++ G T+ ++ L EA S+L +M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ + PD TY+ L+ DA + Y + + P+TVT VL +
Sbjct: 367 EEKGI-SPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF------------- 300
++E V++ M + S + D ++ I+ ++ N G + + +E+F
Sbjct: 426 VAEVEAVIAEM-DRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAA 484
Query: 301 -------RNFGIEPET---------------RTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
+ +E ET +N++I AYGK ++++K ++ + M+
Sbjct: 485 VIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKN- 543
Query: 339 QFPW-TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
Q W TYN++ + V + +M G K KT+ +I + GL
Sbjct: 544 QGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSD 603
Query: 398 VISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
+ + EK + N Y ++++ ++ + E + F+ M+++ + T +I+
Sbjct: 604 AVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIK 663
Query: 458 AYRKEG 463
AY K G
Sbjct: 664 AYSKVG 669
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 154/389 (39%), Gaps = 38/389 (9%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+AL +F +K + P E TY L +L A+++ M++ GC P +TY A+
Sbjct: 533 KALSLFKGMKNQGTW-PDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAM 591
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+A+Y R LL +A + M+ + +P+ Y +LI ++ + + M
Sbjct: 592 IASYVRLGLLSDAVDLYEAMEKTGV-KPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHG 650
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ N + ++ Y K G ++ +V M +S PDV N+++S+ ++G +
Sbjct: 651 VQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEG-GPDVAASNSMLSLCADLGIVSEA 709
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
E + R G + +F ++ Y M D+ V E MR+ +++N V+
Sbjct: 710 ESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMAC 768
Query: 354 FTDVGDAKNMEYTFDQMRAE-GMKADSKTFCCLINGFANAGLFHKVISTVQLA------- 405
+ G F +M E + D TF L G+ + +S +Q A
Sbjct: 769 YAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPL 828
Query: 406 --------------------------EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
EI YNAV+ + + D+ + + R
Sbjct: 829 ATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMR 888
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEGMNDKI 468
M++ PD T ++ Y K GM + +
Sbjct: 889 MQEKGLEPDIVTQAYLVGIYGKAGMVEGV 917
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/377 (20%), Positives = 165/377 (43%), Gaps = 23/377 (6%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
E+ +W + L VF + H Y P Y ++ LG++G+ R + M G P+
Sbjct: 121 EQTRWERVLRVFRFFQSHQSYVPNVIHYNIVLRALGRAGKWDELRLCWIEMAHNGVLPTN 180
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TY L+ Y ++ L+ EA + M + PD T +T+++ ++ +FD + ++
Sbjct: 181 NTYGMLVDVYGKAGLVKEALLWIKHMGQR-MHFPDEVTMATVVRVFKNSGEFDRADRFFK 239
Query: 228 DMAARSI-----------------MPNTVTQNIVLSGYGKAGKFDQMEKVL--SSMLEST 268
A + P + Q + + + K G + +EK L +S +S+
Sbjct: 240 GWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELF-KVGARNPIEKSLHFASGSDSS 298
Query: 269 SCKPDVW-TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
KP + T NT+I ++G G+++ + + G+ +T TFN +I G +
Sbjct: 299 PRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSE 358
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
++++ M + T TYN ++ D GD + + ++R G+ D+ T +++
Sbjct: 359 AESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLH 418
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
+ +V + + ++ I + ++ +++ + +F+R + + C
Sbjct: 419 ILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVL 477
Query: 448 DDTTYTIMIEAYRKEGM 464
TT +I+ Y ++G+
Sbjct: 478 SSTTLAAVIDVYAEKGL 494
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 109/241 (45%), Gaps = 15/241 (6%)
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWY 297
T T N ++ YGKAG+ + + S ML+S D T NT+I G G + E
Sbjct: 305 TSTFNTLIDLYGKAGRLNDAANLFSEMLKS-GVPIDTVTFNTMIHTCGTHGHLSEAESLL 363
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ----FPWTTSTYNNVIEA 353
+K GI P+T+T+NIL+ + + +EY RK++ FP T T+ V+
Sbjct: 364 KKMEEKGISPDTKTYNILLSLHADA---GDIEAALEYYRKIRKVGLFP-DTVTHRAVLHI 419
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI--A 411
+E +M ++ D + ++ + N GL V+ L E+F++
Sbjct: 420 LCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL---VVQAKALFERFQLDCV 476
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT-YTIMIEAYRKEGMNDKIYY 470
++T AV+ + +E E VF ++ +D Y +MI+AY K +++K
Sbjct: 477 LSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALS 536
Query: 471 L 471
L
Sbjct: 537 L 537
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/311 (21%), Positives = 125/311 (40%), Gaps = 37/311 (11%)
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
T++TLI A + + L+ +M + +TVT N ++ G G + E +L M
Sbjct: 307 TFNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKM 366
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
E PD T N ++S+ + G I+ ++Y K R G+ P+T T ++ +++M
Sbjct: 367 -EEKGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKM 425
Query: 325 YDKMSTVMEYMRK----------------------------------LQFPWTTSTYNNV 350
++ V+ M + L +++T V
Sbjct: 426 VAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAV 485
Query: 351 IEAFTDVGDAKNMEYTFDQMR-AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
I+ + + G E F R G + D + +I + A L K +S + +
Sbjct: 486 IDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQG 545
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKI 468
+ YN++ + + E +R+ M D+ C P TY MI +Y + G ++D +
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 469 YYLEQEKKTMI 479
E +KT +
Sbjct: 606 DLYEAMEKTGV 616
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/333 (21%), Positives = 123/333 (36%), Gaps = 38/333 (11%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
EK W++A VF + S Y +I GK+ +A LF M +G P
Sbjct: 491 EKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
TY +L +L+DEA IL EM + C+P TY+ +I V LYE
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEMLDSG-CKPGCKTYAAMIASYVRLGLLSDAVDLYE 609
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M E T KP+ ++I+ F
Sbjct: 610 AM------------------------------------EKTGVKPNEVVYGSLINGFAES 633
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G ++ +++ G++ LI AY K ++ V + M+ + +
Sbjct: 634 GMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAAS 693
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
N+++ D+G E F+ +R +G D +F ++ + G+ + I + +
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKG-TCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
+ + T +N V++ L E +F M
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEM 785
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/362 (20%), Positives = 139/362 (38%), Gaps = 54/362 (14%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+++++ + E + +P E Y LI +SG A Q F M E G + T+L+
Sbjct: 604 AVDLYEAM-EKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLI 662
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD------------------- 215
AY + L+EA + ++MK+ PDV ++++ C D
Sbjct: 663 KAYSKVGCLEEARRVYDKMKDSE-GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGT 721
Query: 216 --AFKFDLVELLY-------------EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKV 260
F + LY E+M ++ + + N V++ Y G+ + ++
Sbjct: 722 CDVISFATMMYLYKGMGMLDEAIEVAEEMRESGLLSDCTSFNQVMACYAADGQLSECCEL 781
Query: 261 LSSMLESTSCKPDVWTMNTIISVFGNMG----QIDMMEKWYEKFRNFGIEPETRTFNILI 316
ML D T T+ ++ G + ++ Y + + T T +
Sbjct: 782 FHEMLVERKLLLDWGTFKTLFTLLKKGGVPSEAVSQLQTAYNEAKPLATPAITATLFSAM 841
Query: 317 GAYGKKRMYDKMSTVMEYMRKL---QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
G Y + +E ++L + P YN VI ++ GD + +M+ +
Sbjct: 842 GLY---------AYALESCQELTSGEIPREHFAYNAVIYTYSASGDIDMALKAYMRMQEK 892
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA--EDLM 431
G++ D T L+ + AG+ V E+ + + + AV A A +DL
Sbjct: 893 GLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRLTFGELEPSQSLFKAVRDAYVSANRQDLA 952
Query: 432 EM 433
++
Sbjct: 953 DV 954
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 123/275 (44%), Gaps = 33/275 (12%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY LI L + G+ A++LFT M+E+ C P+ TYT+L+ C S +DEA
Sbjct: 189 DPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMR 248
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
L EMK+ + +P+VFTYS+L+ C D +E L+E M AR PN VT +++G
Sbjct: 249 YLEEMKSKGI-EPNVFTYSSLMDGLCKDGRSLQAME-LFEMMMARGCRPNMVTYTTLITG 306
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
K K + ++L M KPD +IS F + + + ++ GI P
Sbjct: 307 LCKEQKIQEAVELLDRM-NLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITP 365
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+NI + T E +R L + + AFT +
Sbjct: 366 NRLTWNI------------HVKTSNEVVRGLCANYPS-------RAFT----------LY 396
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
MR+ G+ + +T L+ G F K + V
Sbjct: 397 LSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLV 431
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 121/309 (39%), Gaps = 25/309 (8%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y + ++ +++ L + + A L M E C S + ++ Y R + ++
Sbjct: 47 YVHDQSSFGYMVLRLVSANKFKAAEDLIVRMKIENCVVSEDILLSICRGYGRVHRPFDSL 106
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ ++MK+ C P Y T++ V+ + +L Y++M + P + N+++
Sbjct: 107 RVFHKMKDFD-CDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKA 165
Query: 248 YGKA-GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
+ G D K+ M C PD +T T+IS G+ID +K + +
Sbjct: 166 LCRNDGTVDAGLKIFLEM-PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCA 224
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P T+ LI + D+ +E M+ TY+++++ G +
Sbjct: 225 PTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMEL 284
Query: 367 FDQMRAEGMKADSKTFCCLINGFA----------------------NAGLFHKVISTVQL 404
F+ M A G + + T+ LI G +AGL+ KVIS
Sbjct: 285 FEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCA 344
Query: 405 AEKFEIAEN 413
KF A N
Sbjct: 345 ISKFREAAN 353
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 14/268 (5%)
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN-TVTQNIVLS---GYGKAGK-FDQ 256
D ++ ++ V A KF E D+ R + N V+++I+LS GYG+ + FD
Sbjct: 50 DQSSFGYMVLRLVSANKFKAAE----DLIVRMKIENCVVSEDILLSICRGYGRVHRPFDS 105
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
+ +V M + C P T++++ Q+++ K+Y+ R G+ P + N+LI
Sbjct: 106 L-RVFHKM-KDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLI 163
Query: 317 GAYGKKR-MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
A + D + M K + TY +I G + F +M +
Sbjct: 164 KALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDC 223
Query: 376 KADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA-CTKAEDLMEME 434
T+ LING + + + ++ + I N Y++++ C L ME
Sbjct: 224 APTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAME 283
Query: 435 RVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+F+ M C P+ TYT +I KE
Sbjct: 284 -LFEMMMARGCRPNMVTYTTLITGLCKE 310
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/410 (21%), Positives = 162/410 (39%), Gaps = 63/410 (15%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
P TY LI L + G+ + A ++ +++ G +PS TY++L+ +C+ L F+
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 189 ILNEM--KNHPLCQPDVFTYSTLIKPC------VDAFKFDLVELLYEDMAARSIMPNTVT 240
+ +M +P PDV Y L+ + A +F + M +SI N V
Sbjct: 448 LYEDMIKMGYP---PDVVIYGVLVDGLSKQGLMLHAMRFSV------KMLGQSIRLNVVV 498
Query: 241 QNIVLSGYGKAGKFDQMEKVLS--------------------SMLESTSCK--------- 271
N ++ G+ + +FD+ KV S++E CK
Sbjct: 499 FNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQ 558
Query: 272 -----------PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
D+ N +I + +I+ K++ +EP+ T+N +I Y
Sbjct: 559 LFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYC 618
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
R D+ + E ++ F T T +I D F M +G K ++
Sbjct: 619 SLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAV 678
Query: 381 TFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
T+ CL++ F+ + + ++ I+ + Y+ ++ K + E +F +
Sbjct: 679 TYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQA 738
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPED 490
D + PD Y I+I Y K G + L + M+ +G+K P+D
Sbjct: 739 IDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH---MLRNGVK---PDD 782
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 145/336 (43%), Gaps = 10/336 (2%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
DM+K Y P Y L+ L K G A + M+ + + + +L+ +CR
Sbjct: 451 DMIKMG--YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 180 SNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV--DAF----KFDLVELLYEDMAARS 233
N DEA + M + + +PDV T++T+++ + DAF K + L++ M
Sbjct: 509 LNRFDEALKVFRLMGIYGI-KPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNK 567
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
I + N+V+ K + + K ++++E +PD+ T NT+I + ++ ++D
Sbjct: 568 ISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKM-EPDIVTYNTMICGYCSLRRLDEA 626
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
E+ +E + P T T ILI K D + M + TY +++
Sbjct: 627 ERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDW 686
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
F+ D + F++M+ +G+ ++ +I+G G + + A ++ +
Sbjct: 687 FSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPD 746
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDD 449
Y ++ K L+E +++ M N PDD
Sbjct: 747 VVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDD 782
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 145/353 (41%), Gaps = 45/353 (12%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKS-GQPHRARQLFTTMIEEGCDPSP 167
K + +AL+ ++ E F + G VL G S Q A +L + +++ G P+
Sbjct: 230 KGEVTKALDFHRLVMERGF---RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
T+ L+ +C+ +D AF + M+ + +PD+ YSTLI
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGI-EPDLIAYSTLI----------------- 328
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
GY KAG K+ S L K DV ++ I V+
Sbjct: 329 ------------------DGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKS 369
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
G + Y++ GI P T+ ILI G R+Y+ + +++ P + T
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVT 428
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL-FHKVISTVQLA 405
Y+++I+ F G+ ++ ++ M G D + L++G + GL H + +V++
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ I N +N+++ + E +VF+ M PD T+T ++
Sbjct: 489 GQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRV 540
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 96/236 (40%), Gaps = 8/236 (3%)
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQME---KVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
R V+ N VL G DQ+E ++LS +L+ P+V T T+I+ F G
Sbjct: 246 RGFRVGIVSCNKVLKGL----SVDQIEVASRLLSLVLDCGP-APNVVTFCTLINGFCKRG 300
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
++D ++ GIEP+ ++ LI Y K M + ++
Sbjct: 301 EMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFS 360
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+ I+ + GD + +M +G+ + T+ LI G G ++ K
Sbjct: 361 STIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR 420
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ + Y++++ K +L +++ M PPD Y ++++ K+G+
Sbjct: 421 GMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGL 476
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ +F ++ E +P TY L+ KS + +LF M E+G PS +Y+ ++
Sbjct: 661 AIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 719
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ +DEA +I ++ + L PDV Y+ LI+ + LLYE M +
Sbjct: 720 DGLCKRGRVDEATNIFHQAIDAKL-LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 778
Query: 235 MPNTVTQ 241
P+ + Q
Sbjct: 779 KPDDLLQ 785
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 146/349 (41%), Gaps = 2/349 (0%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A VFD + P +Y +++ + G+ A + T MI+ G P T T +L
Sbjct: 201 AENVFDEMSVRGVV-PDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLIL 259
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A C + L++ A +M + +P++ +++LI + E+M
Sbjct: 260 TALCENGLVNRAIWYFRKMIDLGF-KPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGW 318
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN T ++ G K G ++ ++ ++ S + KP+V T ++I + +++ E
Sbjct: 319 KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAE 378
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ + + G+ P T+ LI + K + + +M M F TYN I++
Sbjct: 379 MLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSL 438
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
A ++ + G++AD T+ LI ++ ++ K +
Sbjct: 439 CKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADM 498
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
N +++A + + + E ER+F+ + P TYT MI Y KEG
Sbjct: 499 RLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEG 547
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/352 (21%), Positives = 152/352 (43%), Gaps = 2/352 (0%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
++P + LI L K G +A ++ M+ G P+ T+TAL+ C+ ++AF
Sbjct: 283 FKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAF 342
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ ++ +P+V TY+++I K + E+L+ M + + PN T +++G
Sbjct: 343 RLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLING 402
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ KAG F + +++ +++ P+++T N I + + K + G+E
Sbjct: 403 HCKAGSFGRAYELM-NLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEA 461
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ T+ ILI K+ ++ M K F N +I AF K E F
Sbjct: 462 DGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLF 521
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+ + G+ +T+ +I+ + G + ++ ++ Y +++S K
Sbjct: 522 QLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKK 581
Query: 428 EDLMEMERVFKRMKDNQC-PPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTM 478
+ E ++++ M D PP+ T T+ E ++ + + LE K +
Sbjct: 582 SMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKL 633
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 146/363 (40%), Gaps = 8/363 (2%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+ P T ++ L ++G +RA F MI+ G P+ +T+L+ C+ + +AF
Sbjct: 248 FIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAF 307
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLS 246
+L EM + +P+V+T++ LI C + L + + + + PN T ++
Sbjct: 308 EMLEEMVRNGW-KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366
Query: 247 GYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
GY K K ++ E + S M E P+V T T+I+ G + + G
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQ-GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFM 425
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P T+N I + KK + ++ TY +I+ D
Sbjct: 426 PNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAF 485
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
F +M G +AD + LI F + QL + Y +++S K
Sbjct: 486 FCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCK 545
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVS 486
D+ + F MK + C PD TY +I K+ M D+ L + MI G+ S
Sbjct: 546 EGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYE---AMIDRGL--S 600
Query: 487 QPE 489
PE
Sbjct: 601 PPE 603
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 117/289 (40%), Gaps = 38/289 (13%)
Query: 103 LSERIEKKQWLQ-ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE 161
L + + K+ W + A +F L Y+P TY +I K + +RA LF+ M E+
Sbjct: 328 LIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQ 387
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
G P+ TYT L+ +C++ A+ ++N M + P+++TY+ I
Sbjct: 388 GLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGF-MPNIYTYNAAI----------- 435
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
+ + +S P ++ + K S LE+ D T +I
Sbjct: 436 -----DSLCKKSRAPEA---------------YELLNKAFSCGLEA-----DGVTYTILI 470
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
I+ ++ + G E + R NILI A+ +++ + + + + L
Sbjct: 471 QEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLI 530
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
T TY ++I + GD F M+ G DS T+ LI+G
Sbjct: 531 PTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLC 579
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/347 (19%), Positives = 137/347 (39%), Gaps = 39/347 (11%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
E +L + L+EA ++ +M+N L P T + +++ V+ + E +++
Sbjct: 148 EVMRCMLRNFSEIGRLNEAVGMVMDMQNQGL-TPSSITMNCVLEIAVELGLIEYAENVFD 206
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+M+ R ++P++ + +++ G + GK + ++ L+ M++ PD T I++
Sbjct: 207 EMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFI-PDNATCTLILTALCEN 265
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK---------- 337
G ++ ++ K + G +P F LI KK + ++E M +
Sbjct: 266 GLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTH 325
Query: 338 -------LQFPWT-------------------TSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+ WT TY ++I + E F +M+
Sbjct: 326 TALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMK 385
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
+G+ + T+ LING AG F + + L N YNA + + K
Sbjct: 386 EQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAP 445
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMI-EAYRKEGMNDKIYYLEQEKKT 477
E + + D TYTI+I E ++ +N + + + KT
Sbjct: 446 EAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKT 492
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 133/306 (43%), Gaps = 8/306 (2%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T+ + +G+P +A +LF M E GC ++ +L C+S +++A+ +
Sbjct: 124 PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYEL 183
Query: 190 LNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
++ D TY+ ++ C+ +E+L E M R I PN T N +L G+
Sbjct: 184 FRALRGR--FSVDTVTYNVILNGWCLIKRTPKALEVLKE-MVERGINPNLTTYNTMLKGF 240
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
+AG+ + M + C+ DV T T++ FG G+I +++ G+ P
Sbjct: 241 FRAGQIRHAWEFFLEM-KKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+N +I KK + + E M + + +TYN +I G+ E
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC---T 425
+M EG + + +T+ +I ++ K + + + N YN ++S
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMFVRK 419
Query: 426 KAEDLM 431
++ED++
Sbjct: 420 RSEDMV 425
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 149/364 (40%), Gaps = 42/364 (11%)
Query: 100 TEDLSERIEKKQW---LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPH-RARQLF 155
T +L + K+ W +AL+ F L H + + L + + H L
Sbjct: 55 TPNLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLI 114
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M PSP+T+ + Y + D+A + M H C D+ +++T++
Sbjct: 115 HRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHG-CFQDLASFNTILDVLCK 173
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
+ + + L+ + R +TVT N++L+G+ + + +VL M+E P++
Sbjct: 174 SKRVEKAYELFRALRGR-FSVDTVTYNVILNGWCLIKRTPKALEVLKEMVER-GINPNLT 231
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
T NT++ F GQI +++ + + E + T+ ++ +G + V + M
Sbjct: 232 TYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
+ + +TYN +I+ + +N F++M G + + T+ LI G +AG F
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 396 HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
++ E+LM+ RM++ C P+ TY +M
Sbjct: 352 -----------------------------SRGEELMQ------RMENEGCEPNFQTYNMM 376
Query: 456 IEAY 459
I Y
Sbjct: 377 IRYY 380
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 136/330 (41%), Gaps = 15/330 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y LI L K G R +L M +GC P+ TY L+ C LD+A S+
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L M + C P+ TY TLI V + D V LL M R N ++++SG
Sbjct: 315 LERMVSSK-CIPNDVTYGTLINGLVKQRRATDAVRLL-SSMEERGYHLNQHIYSVLISGL 372
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK ++ + M E CKP++ + ++ G+ + ++ + G P
Sbjct: 373 FKEGKAEEAMSLWRKMAEK-GCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPN 431
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T++ L+ + K + ++ V + M K Y+ +I+ VG K +
Sbjct: 432 AYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWS 491
Query: 369 QMRAEGMKADSKTFCCLINGFANAG-------LFHKVISTVQLAEKFEIAENTTFYNAVL 421
+M G+K D+ + +I G G L+H+++ E+ + + YN +L
Sbjct: 492 KMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQ----EEPKSQPDVVTYNILL 547
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
+D+ + M D C PD T
Sbjct: 548 DGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/349 (18%), Positives = 143/349 (40%), Gaps = 6/349 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD----PSPET 169
+A+++F + + + ++ ++ ++ G HR + + ++ + P+ +
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
+ ++ A C+ +D A + M C PD +TY TL+ + D LL ++M
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMPERK-CLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
+ P+ V N+++ G K G ++ K++ +M C P+ T NT+I G+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK-GCVPNEVTYNTLIHGLCLKGK 307
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+D E+ + P T+ LI K+R ++ M + + Y+
Sbjct: 308 LDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSV 367
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+I G A+ + +M +G K + + L++G G ++ +
Sbjct: 368 LISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASG 427
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
N Y++++ K E +V+K M C + Y+++I+
Sbjct: 428 CLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDG 476
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 100/216 (46%), Gaps = 12/216 (5%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
+++++ A+ + ++E Y + Y LI L K G+ A L+ M E+GC P+
Sbjct: 338 VKQRRATDAVRLLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPN 396
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVE--- 223
Y+ L+ CR +EA ILN M C P+ +TYS+L+K FK L E
Sbjct: 397 IVVYSVLVDGLCREGKPNEAKEILNRMIASG-CLPNAYTYSSLMK---GFFKTGLCEEAV 452
Query: 224 LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISV 283
++++M N ++++ G G+ + V S ML + KPD ++II
Sbjct: 453 QVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKML-TIGIKPDTVAYSSIIKG 511
Query: 284 FGNMGQIDMMEKWYEKF---RNFGIEPETRTFNILI 316
+G +D K Y + +P+ T+NIL+
Sbjct: 512 LCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILL 547
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 85/196 (43%), Gaps = 3/196 (1%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P Y L+ L + G+P+ A+++ MI GC P+ TY++L+ + ++ L +EA
Sbjct: 394 KPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQ 453
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM + C + F YS LI + +++ M I P+TV + ++ G
Sbjct: 454 VWKEM-DKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGL 512
Query: 249 GKAGKFDQMEKVLSSML--ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
G D K+ ML E +PDV T N ++ I + G +
Sbjct: 513 CGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCD 572
Query: 307 PETRTFNILIGAYGKK 322
P+ T N + +K
Sbjct: 573 PDVITCNTFLNTLSEK 588
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/271 (21%), Positives = 104/271 (38%), Gaps = 39/271 (14%)
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
T S++I+ ++ FD VE L + + + + +V YGKA D+ + M
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF----RNFGIEPETRTFNILIGAYG 320
++ CK V + N++++V N G ++Y+ N I P +FN++I A
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
K R D+ IE F + + K + D
Sbjct: 199 KLRFVDR----------------------AIEVFRGMPERKCL-------------PDGY 223
Query: 381 TFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
T+C L++G + + + + + + YN ++ K DL + ++ M
Sbjct: 224 TYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNM 283
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
C P++ TY +I +G DK L
Sbjct: 284 FLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/366 (22%), Positives = 151/366 (41%), Gaps = 29/366 (7%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDE-AFSILNEMKNH 196
LI K G +A + F M E C P TY +L R + AF++ NEM
Sbjct: 133 LISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREEVFFMLAFAVYNEMLKC 192
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
C P+++T+ L+ + + +++DM R I PN VT I++SG + G D
Sbjct: 193 N-CSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSADD 251
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF---GIEPETRTFN 313
K+ M +++ PD N ++ F +G+ M + +E R F G R ++
Sbjct: 252 ARKLFYEM-QTSGNYPDSVAHNALLDGFCKLGR---MVEAFELLRLFEKDGFVLGLRGYS 307
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
LI + R Y + + M K Y +I+ + G ++ M ++
Sbjct: 308 SLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSK 367
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA------VLSACTKA 427
G+ D+ + +I GL + S + E++E +F +A + S C
Sbjct: 368 GISPDTYCYNAVIKALCGRGLLEEGRSL-----QLEMSETESFPDACTHTILICSMCRNG 422
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQ 487
+ E E +F ++ + C P T+ +I+ K G E ++ ++ ++V +
Sbjct: 423 L-VREAEEIFTEIEKSGCSPSVATFNALIDGLCKSG--------ELKEARLLLHKMEVGR 473
Query: 488 PEDEFF 493
P F
Sbjct: 474 PASLFL 479
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 107/467 (22%), Positives = 169/467 (36%), Gaps = 121/467 (25%)
Query: 117 EVFDMLKEHSFYE-------PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
EVF ML + E P T+ L+ L K G+ A+++F M G P+ T
Sbjct: 176 EVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVT 235
Query: 170 YTALLAAYCRSNLLDEAFSILNEMK---NHP--------------------------LCQ 200
YT L++ C+ D+A + EM+ N+P L +
Sbjct: 236 YTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 201 PDVFT-----YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFD 255
D F YS+LI A ++ LY +M ++I P+ + I++ G KAGK +
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 256 QMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG--------QIDM--------------- 292
K+LSSM S PD + N +I G Q++M
Sbjct: 356 DALKLLSSM-PSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 293 ------------MEKWYEKFRNFGIEPETRTFNILIGAYGK------------------- 321
E+ + + G P TFN LI K
Sbjct: 415 ICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRP 474
Query: 322 -----------KRMYDKM---STVMEYMRKL-QFPWTTS-----TYNNVIEAFTDVGDAK 361
R +D M ++++ R L F T S +YN +I F GD
Sbjct: 475 ASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDID 534
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
+ ++ +G+ DS T+ LING G + + F + Y +++
Sbjct: 535 GALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFR--HSPAVYRSLM 592
Query: 422 S-ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+ +C K + L+ K +K C D+T IE KEG ++
Sbjct: 593 TWSCRKRKVLVAFNLWMKYLKKISCLDDETANE--IEQCFKEGETER 637
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 95/239 (39%), Gaps = 4/239 (1%)
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
E++ + + ++ +++S Y K G ++ + M E C+PDV+T N I+ V
Sbjct: 116 EELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKE-FDCRPDVFTYNVILRVMMR 174
Query: 287 MGQIDMME-KWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
M+ Y + P TF IL+ G Y K R D + + M
Sbjct: 175 EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDA-QKMFDDMTGRGISPNR 233
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
TY +I G A + F +M+ G DS L++GF G + ++L
Sbjct: 234 VTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRL 293
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
EK Y++++ +A + ++ M PD YTI+I+ K G
Sbjct: 294 FEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAG 352
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 115/269 (42%), Gaps = 10/269 (3%)
Query: 110 KQWLQALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
+++ QA E++ +MLK++ +P Y LI L K+G+ A +L ++M +G P
Sbjct: 317 RRYTQAFELYANMLKKN--IKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTY 374
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
Y A++ A C LL+E S+ EM PD T++ LI E ++ +
Sbjct: 375 CYNAVIKALCGRGLLEEGRSLQLEMSETE-SFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+ P+ T N ++ G K+G+ + +L M + ++ F M
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 289 QIDMMEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
+ + K Y +F G P+ ++N+LI + + D ++ ++ +
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 346 TYNNVIEAFTDVG---DAKNMEYTFDQMR 371
TYN +I VG +A + Y D R
Sbjct: 554 TYNTLINGLHRVGREEEAFKLFYAKDDFR 582
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/359 (22%), Positives = 159/359 (44%), Gaps = 27/359 (7%)
Query: 97 NTVTEDLSER--IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
N V + L R +E+ + LQ +M + SF P T+ LI + ++G A ++
Sbjct: 377 NAVIKALCGRGLLEEGRSLQ----LEMSETESF--PDACTHTILICSMCRNGLVREAEEI 430
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK-NHP------LCQPDVFTYS 207
FT + + GC PS T+ AL+ C+S L EA +L++M+ P L ++
Sbjct: 431 FTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFD 490
Query: 208 TLIK--PCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
T+++ + A++ DL + D + P+ V+ N++++G+ +AG D K+L ++L
Sbjct: 491 TMVESGSILKAYR-DLAH--FADTGSS---PDIVSYNVLINGFCRAGDIDGALKLL-NVL 543
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
+ PD T NT+I+ +G+ + K + +F P +++ + K+++
Sbjct: 544 QLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYR-SLMTWSCRKRKVL 602
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
+ M+Y++K+ T N + + F + G+ + ++ + +
Sbjct: 603 VAFNLWMKYLKKIS-CLDDETANEIEQCFKE-GETERALRRLIELDTRKDELTLGPYTIW 660
Query: 386 INGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
+ G +G FH+ + + + +I ++ K E L VF DN
Sbjct: 661 LIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNN 719
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/367 (21%), Positives = 153/367 (41%), Gaps = 15/367 (4%)
Query: 130 PKEGTYMKLIVLLGKSGQPH-RARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
P + LI +G H + +++ MI G P L+ ++C+ L A S
Sbjct: 91 PDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAIS 150
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+L + + D TY+T+I + D +M I+P+TV+ N ++ G+
Sbjct: 151 LLR----NRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGF 206
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K G F + + ++ + E ++ T ++S + N+ I E+ Y G +P+
Sbjct: 207 CKVGNFVRAKALVDEISE-----LNLITHTILLSSYYNLHAI---EEAYRDMVMSGFDPD 258
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
TF+ +I K + ++ M ++ TY ++++ ++ +
Sbjct: 259 VVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYS 318
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
QM G+ D + L++G AG + T ++ + N Y A++ KA
Sbjct: 319 QMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAG 378
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL--EQEKKTMITDGIKVS 486
DL E + +M + P+ TY+ MI Y K+GM ++ L + E + ++ +G
Sbjct: 379 DLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYG 438
Query: 487 QPEDEFF 493
D F
Sbjct: 439 TVIDGLF 445
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 7/348 (2%)
Query: 119 FDMLKEHSFYEPKEGTYM--KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
++ KE +E Y+ L+ L + G+ + L M+ +G YT+L+
Sbjct: 454 IELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDV 513
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQP-DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
+ + + A + EM+ + P DV +Y+ LI + K + Y+ M + I
Sbjct: 514 FFKGGDEEAALAWAEEMQERGM--PWDVVSYNVLISGMLKFGKVG-ADWAYKGMREKGIE 570
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
P+ T NI+++ K G + + K+ M +S KP + + N ++ + G+++
Sbjct: 571 PDIATFNIMMNSQRKQGDSEGILKLWDKM-KSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
+ I P T+ I + K + D + E + + YN +I
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTT 415
+G K M A G D+ TF L++G+ K +ST + + I+ N
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVA 749
Query: 416 FYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
YN ++ + A + E+++ MK PDD TY +I K G
Sbjct: 750 TYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIG 797
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/324 (21%), Positives = 128/324 (39%), Gaps = 2/324 (0%)
Query: 140 VLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLC 199
+LL H + + M+ G DP T+++++ C+ + E +L EM+ +
Sbjct: 232 ILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSV- 290
Query: 200 QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
P+ TY+TL+ A + LY M R I + V +++ G KAG + EK
Sbjct: 291 YPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEK 350
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
+LE P+V T ++ G + E + + P T++ +I Y
Sbjct: 351 TFKMLLEDNQV-PNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGY 409
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADS 379
KK M ++ +++ M TY VI+ G + +MR G++ ++
Sbjct: 410 VKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENN 469
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
L+N G +V V+ + + Y +++ K D +
Sbjct: 470 YILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEE 529
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG 463
M++ P D +Y ++I K G
Sbjct: 530 MQERGMPWDVVSYNVLISGMLKFG 553
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 158/357 (44%), Gaps = 13/357 (3%)
Query: 126 SFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDE 185
S ++P T+ +I L K G+ L M E P+ TYT L+ + ++N+
Sbjct: 253 SGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRH 312
Query: 186 AFSILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
A ++ ++M + P+ D+ Y+ L+ A E ++ + + +PN VT
Sbjct: 313 ALALYSQMVVRGIPV---DLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTA 369
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
++ G KAG E +++ MLE S P+V T +++I+ + G ++ K +
Sbjct: 370 LVDGLCKAGDLSSAEFIITQMLEK-SVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQ 428
Query: 304 GIEPETRTFNILIGAY---GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA 360
+ P T+ +I GK+ M ++S + MR + + ++ +G
Sbjct: 429 NVVPNGFTYGTVIDGLFKAGKEEMAIELS---KEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
K ++ M ++G+ D + LI+ F G ++ + ++ + + YN +
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
+S K + + +K M++ PD T+ IM+ + RK+G ++ I L + K+
Sbjct: 546 ISGMLKFGKV-GADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKS 601
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 147/384 (38%), Gaps = 85/384 (22%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP T+ ++ K G +L+ M G PS + ++ C + ++EA
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 189 ILNEM---KNHP-LCQPDVF------------------------------TYSTLIKPCV 214
ILN+M + HP L +F Y+TLI
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
++ DM AR +P+TVT N ++ GY + S M+E+ P+V
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEA-GISPNV 748
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
T NTII + G I ++KW + ++ G+ P+ T+N LI K
Sbjct: 749 ATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAK------------- 795
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+G+ K + +M A+G+ + T+ LI+ FAN G
Sbjct: 796 ----------------------IGNMKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGK 833
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSA----CT--------KAEDLMEMERVFKRMKD 442
+ ++ K ++ NT+ Y ++S CT KA L E + + K M +
Sbjct: 834 MLQARELLKEMGKRGVSPNTSTYCTMISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEMVE 893
Query: 443 NQ--CPPDDTTYTIMIEAYRKEGM 464
+ P + T Y I A+ K GM
Sbjct: 894 EKGYIPCNQTIYWIS-AAFSKPGM 916
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/356 (19%), Positives = 148/356 (41%), Gaps = 16/356 (4%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY +I L + G A Q + M++ G P +Y L+ +C+ A ++++E
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDE- 221
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ + ++ T++ L+ + +E Y DM P+ VT + +++ K GK
Sbjct: 222 ----ISELNLITHTILLS---SYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGK 274
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ +L M E S P+ T T++ Y + GI + +
Sbjct: 275 VLEGGLLLREM-EEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYT 333
Query: 314 ILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
+L+ G + + + T + Q P TY +++ GD + E+ QM
Sbjct: 334 VLMDGLFKAGDLREAEKTFKMLLEDNQVP-NVVTYTALVDGLCKAGDLSSAEFIITQMLE 392
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA-EDLM 431
+ + + T+ +ING+ G+ + +S ++ E + N Y V+ KA ++ M
Sbjct: 393 KSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEM 452
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQ 487
+E + K M+ ++ ++ ++ G +I ++ K M++ G+ + Q
Sbjct: 453 AIE-LSKEMRLIGVEENNYILDALVNHLKRIG---RIKEVKGLVKDMVSKGVTLDQ 504
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/264 (20%), Positives = 102/264 (38%), Gaps = 33/264 (12%)
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKF-DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
M ++P++ N ++ + G DQ+ + S M+ + PDV+ +N +I F +
Sbjct: 84 MCTFGVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMI-ACGVSPDVFALNVLIHSFCKV 142
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G++ RN I +T T+N +I + + D+ + M K+ T +Y
Sbjct: 143 GRLSFA---ISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSY 199
Query: 348 NNVIEAFTDVGD---AKNM-------------------------EYTFDQMRAEGMKADS 379
N +I+ F VG+ AK + E + M G D
Sbjct: 200 NTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAYRDMVMSGFDPDV 259
Query: 380 KTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
TF +IN G + ++ E+ + N Y ++ + KA ++ +
Sbjct: 260 VTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQ 319
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG 463
M P D YT++++ K G
Sbjct: 320 MVVRGIPVDLVVYTVLMDGLFKAG 343
>AT3G42630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:14722314-14723635 FORWARD
LENGTH=415
Length = 415
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 133/312 (42%), Gaps = 2/312 (0%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y L+ L + P A ++F P+ T AL+ + + + A +I +E+
Sbjct: 50 YAPLVQTLSQRRLPDVAHEIFLQTKSVNLLPNYRTLCALMLCFAENGFVLRARTIWDEII 109
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
N PDVF S LI FD V + +D+AAR V ++ +S +GK G+
Sbjct: 110 NSCFV-PDVFVVSKLISAYEQFGCFDEVAKITKDVAARHSKLLPVVSSLAISCFGKNGQL 168
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
+ ME V+ M +S + T N I+ + G +D MEK Y + + FGI E
Sbjct: 169 ELMEGVIEEM-DSKGVLLEAETANVIVRYYSFFGSLDKMEKAYGRVKKFGIVIEEEEIRA 227
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
++ AY K+R + ++ + + + +N+V+ ++ K+++ F M G
Sbjct: 228 VVLAYLKQRKFYRLREFLSDVGLGRRNLGNMLWNSVLLSYAADFKMKSLQREFIGMLDAG 287
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
D TF F+ LF + T++ + I + + V+ A +E
Sbjct: 288 FSPDLTTFNIRALAFSRMALFWDLHLTLEHMRRLNIVPDLVTFGCVVDAYMDKRLARNLE 347
Query: 435 RVFKRMKDNQCP 446
V+ RM + P
Sbjct: 348 FVYNRMNLDDSP 359
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 124/268 (46%), Gaps = 40/268 (14%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
LS + K +A EVF+ +++ + P TY L+ GK +AR++F MI+ G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDR--FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAG 267
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI---------KPC 213
C P TY+ ++ C++ +DEA I+ M + +C+P F YS L+ +
Sbjct: 268 CHPDIVTYSIMVDILCKAGRVDEALGIVRSM-DPSICKPTTFIYSVLVHTYGTENRLEEA 326
Query: 214 VDAF--------KFDL------------------VELLYEDMAARSIMPNTVTQNIVLSG 247
VD F K D+ V + ++M ++ + PN+ + NI+L
Sbjct: 327 VDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRH 386
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ G+ D+ V M++ C+PD T +I +F +++ +K ++ R G+ P
Sbjct: 387 LIERGEKDEAFDVFRKMIK--VCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFP 444
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYM 335
TF++LI ++R K ++E M
Sbjct: 445 SMHTFSVLINGLCEERTTQKACVLLEEM 472
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/396 (21%), Positives = 171/396 (43%), Gaps = 25/396 (6%)
Query: 99 VTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTM 158
V ED+ R + L F ++ YE Y +I K Q L M
Sbjct: 102 VVEDVLNRF-RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM 160
Query: 159 IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFK 218
++ + ET+ ++ Y R+ +DEA N M+ + L P++ ++ L+ +
Sbjct: 161 RKKKM-LNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDL-PPNLVAFNGLLSALCKSKN 218
Query: 219 FDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMN 278
+ ++E+M R P++ T +I+L G+GK + +V M+++ C PD+ T +
Sbjct: 219 VRKAQEVFENMRDR-FTPDSKTYSILLEGWGKEPNLPKAREVFREMIDA-GCHPDIVTYS 276
Query: 279 TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG-KKRMYDKMSTVMEYMRK 337
++ + G++D +P T +++L+ YG + R+ + + T +E M +
Sbjct: 277 IMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLE-MER 335
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG---- 393
+ +N++I AF KN+ +M+++G+ +SK+ ++ G
Sbjct: 336 SGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDE 395
Query: 394 ---LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
+F K+I + + Y V+ + +++ ++V+K M+ P
Sbjct: 396 AFDVFRKMIKVCE--------PDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMH 447
Query: 451 TYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVS 486
T++++I +E K L +E MI GI+ S
Sbjct: 448 TFSVLINGLCEERTTQKACVLLEE---MIEMGIRPS 480
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 92.0 bits (227), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 117/258 (45%), Gaps = 2/258 (0%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY LI L + A L + E+G TY L+ YC+ +AF++ +EM
Sbjct: 364 TYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEM 423
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ QP FTY++LI K + L+E + + + P+ V N ++ G+ G
Sbjct: 424 MTDGI-QPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGN 482
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
D+ +L M + S PD T N ++ G+ + + + + GI+P+ ++N
Sbjct: 483 MDRAFSLLKEM-DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYN 541
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
LI Y KK V + M L F T TYN +++ + + + E +M++E
Sbjct: 542 TLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKSE 601
Query: 374 GMKADSKTFCCLINGFAN 391
G+ + +FC +I +N
Sbjct: 602 GIVPNDSSFCSVIEAMSN 619
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 149/333 (44%), Gaps = 9/333 (2%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
++P TY ++ + G RA ++ M E G P +Y L+ + L+ AF
Sbjct: 291 FQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAF 347
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ +EM + P +TY+TLI K + E+L ++ + I+ ++VT NI+++G
Sbjct: 348 AYRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILING 406
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
Y + G + + M+ + +P +T ++I V + ++ +EK G++P
Sbjct: 407 YCQHGDAKKAFALHDEMM-TDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ N L+ + D+ ++++ M + TYN ++ G +
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF--YNAVLSACT 425
+M+ G+K D ++ LI+G++ G E + N T YNA+L +
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRD--EMLSLGFNPTLLTYNALLKGLS 583
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
K ++ E + + MK P+D+++ +IEA
Sbjct: 584 KNQEGELAEELLREMKSEGIVPNDSSFCSVIEA 616
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 152/358 (42%), Gaps = 11/358 (3%)
Query: 106 RIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDP 165
RIE W+ +++ M + + Y T+ +I +L K G+ +A+ M G P
Sbjct: 205 RIEN-AWVFYADMYRMEIKSNVY-----TFNIMINVLCKEGKLKKAKGFLGIMEVFGIKP 258
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELL 225
+ TY L+ + ++ A I++EMK+ QPD+ TY+ ++ + + E+L
Sbjct: 259 TIVTYNTLVQGFSLRGRIEGARLIISEMKSKGF-QPDMQTYNPILSWMCNEGRAS--EVL 315
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG 285
E M ++P++V+ NI++ G G + M++ P +T NT+I
Sbjct: 316 RE-MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMV-PTFYTYNTLIHGLF 373
Query: 286 NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
+I+ E + R GI ++ T+NILI Y + K + + M T
Sbjct: 374 MENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQF 433
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
TY ++I + + F+++ +GMK D L++G G + S ++
Sbjct: 434 TYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ I + YN ++ E + MK PD +Y +I Y K+G
Sbjct: 494 DMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 3/228 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY LI + G +A L M+ +G P+ TYT+L+ CR N EA + ++
Sbjct: 399 TYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKV 458
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ +PD+ +TL+ D L ++M SI P+ VT N ++ G GK
Sbjct: 459 VGKGM-KPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
F++ +++ M + KPD + NT+IS + G ++ + G P T+N
Sbjct: 518 FEEARELMGEM-KRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYN 576
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
L+ K + + ++ M+ S++ +VIEA +++ DAK
Sbjct: 577 ALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNL-DAK 623
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 149/384 (38%), Gaps = 18/384 (4%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K +L +EVF + +P TY L+ G+ AR + + M +G P +T
Sbjct: 245 KGFLGIMEVFGI-------KPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQT 297
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
Y +L+ C A +L EMK L PD +Y+ LI+ C + ++ ++M
Sbjct: 298 YNPILSWMCNEG---RASEVLREMKEIGLV-PDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
+ ++P T N ++ G K + E ++ + E D T N +I+ + G
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK-GIVLDSVTYNILINGYCQHGD 412
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+++ GI+P T+ LI +K + + E + N
Sbjct: 413 AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNT 472
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+++ +G+ +M + D T+ CL+ G G F + + ++
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
I + YN ++S +K D V M P TY +++ K N +
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSK---NQEGE 589
Query: 470 YLEQEKKTMITDGIKVSQPEDEFF 493
E+ + M ++GI P D F
Sbjct: 590 LAEELLREMKSEGI---VPNDSSF 610
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 100/251 (39%), Gaps = 41/251 (16%)
Query: 272 PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV 331
P T N I+++ + +I+ +Y I+ TFNI+I K+ K
Sbjct: 188 PKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGF 247
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
+ M T TYN +++ F+ G + +M+++G + D +T+ +++ N
Sbjct: 248 LGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCN 307
Query: 392 AGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL--------------------- 430
G +V+ ++ + + ++ YN ++ C+ DL
Sbjct: 308 EGRASEVLREMK---EIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYT 364
Query: 431 ---------ME-----MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
ME E + + +++ D TY I+I Y + G K + L E
Sbjct: 365 YNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDE-- 422
Query: 477 TMITDGIKVSQ 487
M+TDGI+ +Q
Sbjct: 423 -MMTDGIQPTQ 432
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/371 (21%), Positives = 154/371 (41%), Gaps = 10/371 (2%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
DM+K Y P Y L+ L K G A + M+ + + + +L+ +CR
Sbjct: 451 DMIKMG--YPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCR 508
Query: 180 SNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTV 239
N DEA + M + + +PDV T++T+++ + + + L+ M + P+ +
Sbjct: 509 LNRFDEALKVFRLMGIYGI-KPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 240 TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK 299
++ + K K + L +++ D+ N +I + +I+ K++
Sbjct: 568 AYCTLIDAFCKHMK-PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 300 FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
+EP+ T+N +I Y R D+ + E ++ F T T +I D
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
F M +G K ++ T+ CL++ F+ + + ++ I+ + Y+
Sbjct: 687 MDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSI 746
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMI 479
++ K + E +F + D + PD Y I+I Y K G + L + M+
Sbjct: 747 IIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEH---ML 803
Query: 480 TDGIKVSQPED 490
+G+K P+D
Sbjct: 804 RNGVK---PDD 811
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 147/344 (42%), Gaps = 22/344 (6%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
P TY LI L + G+ + A ++ +++ G +PS TY++L+ +C+ L F+
Sbjct: 388 SPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFA 447
Query: 189 ILNEM--KNHPLCQPDVFTYSTLIKPC------VDAFKFDLVELLYEDMAARSIMPNTVT 240
+ +M +P PDV Y L+ + A +F + M +SI N V
Sbjct: 448 LYEDMIKMGYP---PDVVIYGVLVDGLSKQGLMLHAMRFSV------KMLGQSIRLNVVV 498
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF 300
N ++ G+ + +FD+ KV ++ KPDV T T++ V G+++ E + F
Sbjct: 499 FNSLIDGWCRLNRFDEALKVF-RLMGIYGIKPDVATFTTVMRVSIMEGRLE--EALFLFF 555
Query: 301 RNF--GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
R F G+EP+ + LI A+ K + + M++ + + N VI
Sbjct: 556 RMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 615
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
++ F+ + M+ D T+ +I G+ + + +L + NT
Sbjct: 616 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 675
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
++ K D+ R+F M + P+ TY +++ + K
Sbjct: 676 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 719
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 83/366 (22%), Positives = 151/366 (41%), Gaps = 45/366 (12%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKS-GQPHRARQLFTTMIEEGCDPSP 167
K + +AL+ ++ E F + G VL G S Q A +L + +++ G P+
Sbjct: 230 KGEVTKALDFHRLVMERGF---RVGIVSCNKVLKGLSVDQIEVASRLLSLVLDCGPAPNV 286
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
T+ L+ +C+ +D AF + M+ + +PD+ YSTLI
Sbjct: 287 VTFCTLINGFCKRGEMDRAFDLFKVMEQRGI-EPDLIAYSTLI----------------- 328
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
GY KAG K+ S L K DV ++ I V+
Sbjct: 329 ------------------DGYFKAGMLGMGHKLFSQALHK-GVKLDVVVFSSTIDVYVKS 369
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
G + Y++ GI P T+ ILI G R+Y+ + +++ P + T
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP-SIVT 428
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL-FHKVISTVQLA 405
Y+++I+ F G+ ++ ++ M G D + L++G + GL H + +V++
Sbjct: 429 YSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKML 488
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
+ I N +N+++ + E +VF+ M PD T+T ++ EG
Sbjct: 489 GQ-SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547
Query: 466 DKIYYL 471
++ +L
Sbjct: 548 EEALFL 553
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 70/316 (22%), Positives = 126/316 (39%), Gaps = 37/316 (11%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
KSG A ++ M+ +G P+ TYT L+ C+ + EAF + ++ + +P +
Sbjct: 368 KSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGM-EPSI 426
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
TYS+LI LYEDM P+ V +++ G K G +
Sbjct: 427 VTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVK 486
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
ML S + +V N++I + + + D K + +GI+P+ TF
Sbjct: 487 ML-GQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF----------- 534
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+TVM +++E G + + F +M G++ D+ +C
Sbjct: 535 -----TTVMRV--------------SIME-----GRLEEALFLFFRMFKMGLEPDALAYC 570
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
LI+ F + L ++ +I+ + N V+ K + + + F + +
Sbjct: 571 TLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEG 630
Query: 444 QCPPDDTTYTIMIEAY 459
+ PD TY MI Y
Sbjct: 631 KMEPDIVTYNTMICGY 646
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 76/160 (47%), Gaps = 3/160 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A +F++LK F P T LI +L K+ A ++F+ M E+G P+ TY L
Sbjct: 654 EAERIFELLKVTPF-GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCL 712
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ + +S ++ +F + EM+ + P + +YS +I + D ++
Sbjct: 713 MDWFSKSVDIEGSFKLFEEMQEKGI-SPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 771
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
++P+ V I++ GY K G+ + + ML + KPD
Sbjct: 772 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN-GVKPD 810
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 2/127 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ +F ++ E +P TY L+ KS + +LF M E+G PS +Y+ ++
Sbjct: 690 AIRMFSIMAEKG-SKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIII 748
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ +DEA +I ++ + L PDV Y+ LI+ + LLYE M +
Sbjct: 749 DGLCKRGRVDEATNIFHQAIDAKL-LPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGV 807
Query: 235 MPNTVTQ 241
P+ + Q
Sbjct: 808 KPDDLLQ 814
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 131/294 (44%), Gaps = 2/294 (0%)
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
T L+ C++ L+ A +L MK+ + P+V TYS+LI + + E +M
Sbjct: 52 TILIDTLCKNRLVVPALEVLKRMKDRGI-SPNVVTYSSLITGLCKSGRLADAERRLHEMD 110
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
++ I PN +T + ++ Y K GK +++ V M++ S P+V+T +++I ++
Sbjct: 111 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQ-MSIDPNVFTYSSLIYGLCMHNRV 169
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
D K + + G P T++ L + K D +++ M + T + N +
Sbjct: 170 DEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTL 229
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
I+ + G F M + G+ + +++ ++ G G K +S + +K
Sbjct: 230 IKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRN 289
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ Y ++ KA + E +F ++K + PD YTIMI + GM
Sbjct: 290 DLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGM 343
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 135/315 (42%), Gaps = 4/315 (1%)
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDA 216
M++ G +P T ++L+ +C SN + +A + +M+ + + DV + LI C +
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGI-KRDVVVDTILIDTLCKNR 62
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
+E+L + M R I PN VT + +++G K+G+ E+ L M +S P+V T
Sbjct: 63 LVVPALEVL-KRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEM-DSKKINPNVIT 120
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
+ +I + G++ ++ Y+ I+P T++ LI D+ +++ M
Sbjct: 121 FSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMI 180
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
TY+ + F + D M G+ A++ + LI G+ AG
Sbjct: 181 SKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKID 240
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
+ + N YN VL+ ++ + F+ M+ + D TYTIMI
Sbjct: 241 LALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMI 300
Query: 457 EAYRKEGMNDKIYYL 471
K M + Y L
Sbjct: 301 HGMCKACMVKEAYDL 315
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 127/280 (45%), Gaps = 3/280 (1%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
ALEV +K+ P TY LI L KSG+ A + M + +P+ T++AL+
Sbjct: 67 ALEVLKRMKDRGI-SPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALI 125
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
AY + L + S+ M + P+VFTYS+LI + D + + M ++
Sbjct: 126 DAYAKRGKLSKVDSVYKMMIQMSI-DPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGC 184
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN VT + + +G+ K+ + D K+L M + + + NT+I + G+ID+
Sbjct: 185 TPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQR-GVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ + G+ P R++NI++ +K + E+M+K + TY +I
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
K F +++ + ++ D K + +I AG+
Sbjct: 304 CKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGM 343
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 152/339 (44%), Gaps = 19/339 (5%)
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDE---AFSILNEMKNHPLCQPDVFTYSTLIK 211
F ++++E P P ALL N L E + N +K+ L + Y+ +K
Sbjct: 140 FLSLLDEIPHP-PNRDNALLVL----NSLREWQKTHTFFNWVKSKSLFPMETIFYNVTMK 194
Query: 212 PCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCK 271
+F L+E + +M + + +T + +++ + +++ + M + T
Sbjct: 195 SLRFGRQFQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYK-TGLM 253
Query: 272 PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV 331
PD T + I+ V+ G+++ + YE+ G +P+ F++L +G+ YD + V
Sbjct: 254 PDEVTYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYV 313
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
++ M+ + YN ++EA G F++M G+ + KT L+ +
Sbjct: 314 LQEMKSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGK 373
Query: 392 AGLFHKVISTVQLAEKFEIAE---NTTFYNAVLSACTKAEDLMEMERVFKRMKDN-QCPP 447
A + QL E+ + + + YN +L+ C E ER+F MK++ QC P
Sbjct: 374 ARWARDAL---QLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRP 430
Query: 448 DDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVS 486
D+ +YT M+ Y G +K L +E M+ G++V+
Sbjct: 431 DNFSYTAMLNIYGSGGKAEKAMELFEE---MLKAGVQVN 466
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 147/373 (39%), Gaps = 48/373 (12%)
Query: 119 FDMLKEHSFYEPKEG------TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
F +++E + K+G TY +I + ++A + F M + G P TY+A
Sbjct: 202 FQLIEEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSA 261
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
+L Y +S ++E S L E +PD +S L K +A +D + + ++M +
Sbjct: 262 ILDVYSKSGKVEEVLS-LYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSM 320
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
+ PN V N +L G+AGK + + MLE+
Sbjct: 321 DVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEA------------------------- 355
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
G+ P +T L+ YGK R + E M+ ++P YN ++
Sbjct: 356 -----------GLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNTLLN 404
Query: 353 AFTDVGDAKNMEYTFDQMR-AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
D+G + E F+ M+ + + D+ ++ ++N + + G K + + K +
Sbjct: 405 MCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKAGVQ 464
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDD----TTYTIMIEAYRKEGMNDK 467
N ++ KA+ + ++ VF PDD ++M E
Sbjct: 465 VNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRGVKPDDRLCGCLLSVMALCESSEDAEKV 524
Query: 468 IYYLEQEKKTMIT 480
+ LE+ K ++T
Sbjct: 525 MACLERANKKLVT 537
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 140/331 (42%), Gaps = 43/331 (12%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+ LQ + FD +K F +++++L G SG A +LF M E C+ + +++
Sbjct: 108 EVLQYQKKFDDIKSEDFV-------IRIMLLYGYSGMAEHAHKLFDEMPELNCERTVKSF 160
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
ALL+AY S LDEA E+ PD+ TY+T+IK D + ++E++
Sbjct: 161 NALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELE 220
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
P+ ++ N +L + + F + +++ +++S + P++ + N+ + +
Sbjct: 221 KNGFEPDLISFNTLLEEFYRRELFVEGDRIW-DLMKSKNLSPNIRSYNSRVRGLTRNKKF 279
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ + GI P+ T+N LI AY R+ + + VM+
Sbjct: 280 TDALNLIDVMKTEGISPDVHTYNALITAY---RVDNNLEEVMK----------------- 319
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
+++M+ +G+ D+ T+C LI G + + + A K ++
Sbjct: 320 ---------------CYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKL 364
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMK 441
Y V+ A + E ++ K K
Sbjct: 365 LSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 124/271 (45%), Gaps = 4/271 (1%)
Query: 206 YSTLIKPCVDAFKFDLV-ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
YS I+ +A KF + E+L I I+L YG +G + K+ M
Sbjct: 90 YSAFIRRLREAKKFSTIDEVLQYQKKFDDIKSEDFVIRIMLL-YGYSGMAEHAHKLFDEM 148
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQID-MMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
E +C+ V + N ++S + N ++D M+ + E GI P+ T+N +I A +K
Sbjct: 149 PE-LNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKG 207
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
D + ++ E + K F ++N ++E F + +D M+++ + + +++
Sbjct: 208 SMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYN 267
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
+ G F ++ + + + I+ + YNA+++A +L E+ + + MK+
Sbjct: 268 SRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEK 327
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
PD TY ++I K+G D+ + +E
Sbjct: 328 GLTPDTVTYCMLIPLLCKKGDLDRAVEVSEE 358
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 104/236 (44%), Gaps = 4/236 (1%)
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
A KF +++VL + K + + + I+ ++G G + K +++ E +
Sbjct: 100 AKKFSTIDEVLQYQKKFDDIKSEDFVIR-IMLLYGYSGMAEHAHKLFDEMPELNCERTVK 158
Query: 311 TFNILIGAY-GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+FN L+ AY K++ + M T E KL TYN +I+A G ++ F++
Sbjct: 159 SFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEE 218
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
+ G + D +F L+ F LF + L + ++ N YN+ + T+ +
Sbjct: 219 LEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKK 278
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY--YLEQEKKTMITDGI 483
+ + MK PD TY +I AYR + +++ Y E ++K + D +
Sbjct: 279 FTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTV 334
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 135/321 (42%), Gaps = 8/321 (2%)
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCV 214
F MI +G PS +L S ++++A ++ M H + P V T++T++ C
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGI-MPTVITFNTMLDSCF 249
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLEST-SCKPD 273
A + V+ ++ +M R+I + VT NI+++G+ K GK ++ + M S + P
Sbjct: 250 KAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP- 308
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
++ N +I + G D ++ N GI P T T+NI I A + ++ E
Sbjct: 309 -YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCD---FGRIDDARE 364
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+ + P S YN ++ + +G FD +RA + T+ LI+G +G
Sbjct: 365 LLSSMAAPDVVS-YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
+ I + Y ++ K +L V+ M PD YT
Sbjct: 424 NLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYT 483
Query: 454 IMIEAYRKEGMNDKIYYLEQE 474
+ G +DK + L +E
Sbjct: 484 TRAVGELRLGDSDKAFRLHEE 504
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 146/355 (41%), Gaps = 15/355 (4%)
Query: 126 SFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDE 185
S P +Y L+ K G+ A LF + PS TY L+ C S L+
Sbjct: 368 SMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEG 427
Query: 186 AFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVL 245
A + EM L PDV TY+TL+K V + +Y++M + I P+
Sbjct: 428 AQRLKEEMTTQ-LIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRA 486
Query: 246 SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGI 305
G + G D+ ++ M+ + PD+ N I +G + ++ K G+
Sbjct: 487 VGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGL 546
Query: 306 EPETRTFNILIGAYGK-------KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
P+ T+ +I Y + + +YD+M +RK +P + TY +I G
Sbjct: 547 VPDHVTYTTVIRGYLENGQFKMARNLYDEM------LRKRLYP-SVITYFVLIYGHAKAG 599
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
+ +M+ G++ + T L+ G AG + + E+ I N Y
Sbjct: 600 RLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYT 659
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
++S E E+ +++K M D + PD T+ + + K+ + ++ +LE+
Sbjct: 660 MLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEKDHESREVEFLER 714
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 105/256 (41%), Gaps = 5/256 (1%)
Query: 224 LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISV 283
L +E M + +P+ NIVL + ++ V +M+E P V T NT++
Sbjct: 189 LSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEH-GIMPTVITFNTMLDS 247
Query: 284 FGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT 343
G ++ ++K + + + IE T+NILI + K ++ MR+ F T
Sbjct: 248 CFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVT 307
Query: 344 TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ 403
++N +IE + G + D+M G+ + T+ I + G ++ +
Sbjct: 308 PYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG---RIDDARE 364
Query: 404 LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L A + YN ++ K +E +F ++ P TY +I+ + G
Sbjct: 365 LLSSMA-APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESG 423
Query: 464 MNDKIYYLEQEKKTMI 479
+ L++E T +
Sbjct: 424 NLEGAQRLKEEMTTQL 439
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 11/162 (6%)
Query: 98 TVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTT 157
T T + +E Q+ A ++D + Y P TY LI K+G+ +A Q T
Sbjct: 552 TYTTVIRGYLENGQFKMARNLYDEMLRKRLY-PSVITYFVLIYGHAKAGRLEQAFQYSTE 610
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF 217
M + G P+ T+ ALL C++ +DEA+ L +M+ + P+ ++Y+ LI D
Sbjct: 611 MKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGI-PPNKYSYTMLISKNCDFE 669
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
K++ V LY++M + I P+ GY F +EK
Sbjct: 670 KWEEVVKLYKEMLDKEIEPD---------GYTHRALFKHLEK 702
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/351 (21%), Positives = 145/351 (41%), Gaps = 5/351 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y+ Y L ++G A QL M +G PS + + L+ + + +
Sbjct: 154 YKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVY 213
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ +MK +P VF Y+ ++ V FDL +YED ++ + T I++ G
Sbjct: 214 YVYEKMKKFGF-KPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKG 272
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
KAG+ ++M ++L M E+ CKPDV+ +I + G +D + +++ R I+P
Sbjct: 273 LCKAGRIEEMLEILQRMRENL-CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKP 331
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+ + L+ K ++ + M+ Q Y +IE F G ++ +
Sbjct: 332 DVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLW 391
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+ + G AD + +I G + K Q+A + E+ + + ++ A
Sbjct: 392 EDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVM 451
Query: 428 EDLMEMERVFKRMKDNQCPPDDTT---YTIMIEAYRKEGMNDKIYYLEQEK 475
L + V +R+ + P D + ++ K M ++Y+ + K
Sbjct: 452 NRLSDFSNVLERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTK 502
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 126/313 (40%), Gaps = 37/313 (11%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL V++ KE E + T+M L+ L K+G+ ++ M E C P YTA++
Sbjct: 247 ALAVYEDFKEDGLVE-ESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMI 305
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
LD + + +EM+ + +PDV Y TL+ + + L+ +M + I
Sbjct: 306 KTLVSEGNLDASLRVWDEMRRDEI-KPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQI 364
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
+ + +++ G+ GK + +++S D+ N +I ++ Q+D
Sbjct: 365 LIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYI-ADIGIYNAVIKGLCSVNQVDKAY 423
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP------------- 341
K ++ +EP+ T + ++ AY S V+E + +L +P
Sbjct: 424 KLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELGYPVSDYLTQFFKLLC 483
Query: 342 ---------------------WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
+ S YN ++EA +GD + F +MR G + DS
Sbjct: 484 ADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSS 543
Query: 381 TFCCLINGFANAG 393
++ I F G
Sbjct: 544 SYSIAICCFVEKG 556
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 86/213 (40%), Gaps = 2/213 (0%)
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
K D N G ++ E + G P + F ILI + R ++
Sbjct: 155 KHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYY 214
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
V E M+K F YN +++A G ++ + +G+ +S TF L+ G
Sbjct: 215 VYEKMKKFGFKPRVFLYNRIMDALVKNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLC 274
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
AG +++ +Q + + Y A++ +L RV+ M+ ++ PD
Sbjct: 275 KAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVM 334
Query: 451 TYTIMIEAYRKEGMNDKIY--YLEQEKKTMITD 481
Y ++ K+G ++ Y ++E + K ++ D
Sbjct: 335 AYGTLVVGLCKDGRVERGYELFMEMKGKQILID 367
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/363 (22%), Positives = 151/363 (41%), Gaps = 9/363 (2%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
E++ W Q + F +K Y P Y ++ L G+ G+ A + F M+E GC+P
Sbjct: 164 EQRGWRQVRDFFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDA 223
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHP-LCQPDVFTY--STLIKPCVDAFKFDLVEL 224
+L Y R + ++ L V+ + S+L K +F +++L
Sbjct: 224 VACGTMLCTYARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKK---SFHGKVIDL 280
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
E M + PN T +V+S Y K G ++ K M +S P+ T +++IS+
Sbjct: 281 WLE-MVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEM-KSLGFVPEEVTYSSVISLS 338
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
G + YE R+ GI P T ++ Y K Y K ++ M + + P
Sbjct: 339 VKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADMERNKIPADE 398
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
+I + +G + + F++ + AD KT+ + N+G K + +++
Sbjct: 399 VIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNVVKALDVIEM 458
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
+ +I + Y +L K +++ E F+ + PD ++ M+ Y + +
Sbjct: 459 MKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGL-PDASSCNDMLNLYTRLNL 517
Query: 465 NDK 467
+K
Sbjct: 518 GEK 520
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 161/366 (43%), Gaps = 8/366 (2%)
Query: 131 KEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSIL 190
+E T LI + G+ + A++L+ E P +++ AY R L++A+ +
Sbjct: 669 EEETIATLIAVYGRQHKLKEAKRLYLAAGESKT-PGKSVIRSMIDAYVRCGWLEDAYGLF 727
Query: 191 NEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGK 250
E C P T S L+ + K E + ++I +TV N ++ +
Sbjct: 728 MESAEKG-CDPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLE 786
Query: 251 AGKFDQMEKVLSSMLESTSCKP-DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
AGK ++ M TS P + T NT+ISV+G Q+D + + R G+ +
Sbjct: 787 AGKLQCASEIYERM--HTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDE 844
Query: 310 RTFNILIGAYGKK-RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
+ + +I YGK +M + +S E +K P T S YN +++ ++
Sbjct: 845 KIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPS-YNMMVKICATSRLHHEVDELLQ 903
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M G D T+ LI +A + F + T+ L ++ I + + ++++LSA KA
Sbjct: 904 AMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAG 963
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK-IYYLEQEKKTMITDGIKVSQ 487
+ E ER + +M + PD +++ Y G +K I + E+ ++ + D VS
Sbjct: 964 MMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYEKMIRSSVEDDRFVSS 1023
Query: 488 PEDEFF 493
++ +
Sbjct: 1024 VVEDLY 1029
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 138/333 (41%), Gaps = 13/333 (3%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
++I + G +A + +I G ET L+A Y R + L EA K
Sbjct: 640 RVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEA-------KRL 692
Query: 197 PLCQPDVFT-YSTLIKPCVDAFK----FDLVELLYEDMAARSIMPNTVTQNIVLSGYGKA 251
L + T ++I+ +DA+ + L+ + A + P VT +I+++
Sbjct: 693 YLAAGESKTPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNR 752
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT 311
GK + E + + LE + + D NT+I G++ + YE+ G+ +T
Sbjct: 753 GKHREAEHISRTCLEK-NIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQT 811
Query: 312 FNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+N +I YG+ DK + R+ Y N+I + G F +M+
Sbjct: 812 YNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQ 871
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
+G+K + ++ ++ A + L H+V +Q E+ + + Y ++ ++
Sbjct: 872 KKGIKPGTPSYNMMVKICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFA 931
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
E E+ +K+ P + ++ ++ A K GM
Sbjct: 932 EAEKTITLVKEKGIPLSHSHFSSLLSALVKAGM 964
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 14/302 (4%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
E Y + YC+ ++ EA ++ +M + + F TL + K D E +
Sbjct: 538 ELYKTAMRVYCKEGMVAEAQDLIVKMGREARVKDNRFV-QTLAESMHIVNKHDKHEAVL- 595
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+++ +M + N+ L K G ++ + +L+ M ++ V N +IS F
Sbjct: 596 NVSQLDVMALGLMLNLRL----KEGNLNETKAILNLMFKTDLGSSAV---NRVISSFVRE 648
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G + E + G+ E T LI YG++ + + + + P S
Sbjct: 649 GDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGESKTP-GKSVI 707
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV--ISTVQLA 405
++I+A+ G ++ F + +G + T L+N N G + IS L
Sbjct: 708 RSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHREAEHISRTCLE 767
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
+ E+ +T YN ++ A +A L +++RM + P TY MI Y +
Sbjct: 768 KNIEL--DTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQL 825
Query: 466 DK 467
DK
Sbjct: 826 DK 827
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/299 (22%), Positives = 127/299 (42%), Gaps = 6/299 (2%)
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
PE + L+ + +N++ +A +L+EM + L +PD + + L+ ++
Sbjct: 167 PELFVVLMRRFASANMVKKAVEVLDEMPKYGL-EPDEYVFGCLLDALCKNGSVKEASKVF 225
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
EDM + PN +L G+ + GK + ++VL M E+ +PD+ ++S + +
Sbjct: 226 EDMREK-FPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEA-GLEPDIVVFTNLLSGYAH 283
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK--KRMYDKMSTVMEYMRKLQFPWTT 344
G++ R G EP + +LI A + KRM + M +E M +
Sbjct: 284 AGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVE-MERYGCEADI 342
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
TY +I F G D MR +G+ T+ ++ F + + ++
Sbjct: 343 VTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEK 402
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
++ + YN V+ K ++ E R++ M+ N P T+ IMI + +G
Sbjct: 403 MKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQG 461
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 4/208 (1%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
++A EV +KE EP + L+ +G+ A L M + G +P+ YT
Sbjct: 253 MEAKEVLVQMKEAGL-EPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTV 311
Query: 173 LLAAYCRS-NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
L+ A CR+ +DEA + EM+ + C+ D+ TY+ LI D + +DM
Sbjct: 312 LIQALCRTEKRMDEAMRVFVEMERYG-CEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
+ +MP+ VT ++ + K +F++ +++ M + C PD+ N +I + +G++
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKM-KRRGCHPDLLIYNVVIRLACKLGEVK 429
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAY 319
+ + + G+ P TF I+I +
Sbjct: 430 EAVRLWNEMEANGLSPGVDTFVIMINGF 457
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 2/168 (1%)
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
+G+EP+ F L+ A K + S V E MR+ +FP + +++ + G
Sbjct: 196 YGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMRE-KFPPNLRYFTSLLYGWCREGKLME 254
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
+ QM+ G++ D F L++G+A+AG + K N Y ++
Sbjct: 255 AKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQ 314
Query: 423 ACTKAEDLM-EMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
A + E M E RVF M+ C D TYT +I + K GM DK Y
Sbjct: 315 ALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGY 362
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 145/371 (39%), Gaps = 37/371 (9%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY LI G ++ M E G + TYT+L+ YC+ L++EA + +
Sbjct: 263 TYNSLINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELL 322
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
K L D Y L+ + ++++M + NT N +++GY K+G+
Sbjct: 323 KEKKLV-ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQ 381
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ E++ S M S KPD T NT++ + G +D K ++ + P T+N
Sbjct: 382 LVEAEQIFSRM-NDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYN 440
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
IL+ Y + + + ++ + M K + + ++EA +GD ++ + A
Sbjct: 441 ILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLAR 500
Query: 374 GMKADSKTFCCLINGFA-------------NAGLF-------------HKVISTVQLAEK 407
G+ D+ T +I+G N +F H L E
Sbjct: 501 GLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEA 560
Query: 408 FEIAE---------NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
F + E YN ++S K L ++ + ++ P TY +I
Sbjct: 561 FAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITG 620
Query: 459 YRKEGMNDKIY 469
+ GM DK Y
Sbjct: 621 WCNIGMIDKAY 631
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 1/202 (0%)
Query: 267 STSCKPDVWTMNTIISVFGNMGQID-MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
S PDV+T + +++ + G +D M E + G+E T+N LI Y
Sbjct: 218 SFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDV 277
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
+ M+ V+ M + TY ++I+ + G + E+ F+ ++ + + AD + L
Sbjct: 278 EGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVL 337
Query: 386 INGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
++G+ G + + + NTT N++++ K+ L+E E++F RM D
Sbjct: 338 MDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSL 397
Query: 446 PPDDTTYTIMIEAYRKEGMNDK 467
PD TY +++ Y + G D+
Sbjct: 398 KPDHHTYNTLVDGYCRAGYVDE 419
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/390 (20%), Positives = 156/390 (40%), Gaps = 35/390 (8%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
EK AL VFD + + P + L+ L + G+ A ++ MI P
Sbjct: 167 EKGLVKNALHVFDNMGNYGRI-PSLLSCNSLLSNLVRKGENFVALHVYDQMISFEVSPDV 225
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
T + ++ AYCRS +D+A E ++ + +V TY++LI + + +
Sbjct: 226 FTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGDVEGMTRVLR 285
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES-------------------- 267
M+ R + N VT ++ GY K G ++ E V + E
Sbjct: 286 LMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMDGYCRTG 345
Query: 268 --------------TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ + N++I+ + GQ+ E+ + + ++ ++P+ T+N
Sbjct: 346 QIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYN 405
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
L+ Y + D+ + + M + + T TYN +++ ++ +G ++ + M
Sbjct: 406 TLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKR 465
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
G+ AD + L+ G F++ + + + +T N ++S K E + E
Sbjct: 466 GVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEA 525
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ + + +C P TY + Y K G
Sbjct: 526 KEILDNVNIFRCKPAVQTYQALSHGYYKVG 555
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/313 (22%), Positives = 121/313 (38%), Gaps = 22/313 (7%)
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
C P+ +TY AL Y + L EAF++ M+ + P + Y+TLI + V
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIF-PTIEMYNTLISGAFKYRHLNKV 595
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
L ++ AR + P T +++G+ G D+ M+E +V + I +
Sbjct: 596 ADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEK-GITLNVNICSKIAN 654
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ +ID +K +F + +L G K + +T +K+
Sbjct: 655 SLFRLDKIDEACLLLQKIVDFDL--------LLPGYQSLKEFLEASATTCLKTQKIAESV 706
Query: 343 TTST-----------YNNVIEAFTDVGDAKNMEYTF-DQMRAEGMKADSKTFCCLINGFA 390
ST YN I G ++ F D + ++ D T+ LI+G A
Sbjct: 707 ENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCA 766
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
AG +K + I N YNA++ K ++ +R+ ++ P+
Sbjct: 767 IAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAI 826
Query: 451 TYTIMIEAYRKEG 463
TY +I+ K G
Sbjct: 827 TYNTLIDGLVKSG 839
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
P+ Y +A C++ L++A + +++ + PD +TY+ LI C A +
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L ++MA + I+PN VT N ++ G K G D+ +++L L P+ T NT+I
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHK-LPQKGITPNAITYNTLIDGL 835
Query: 285 ---GNMGQ-IDMMEKWYEK 299
GN+ + + + EK EK
Sbjct: 836 VKSGNVAEAMRLKEKMIEK 854
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 118/310 (38%), Gaps = 53/310 (17%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
+ E +E+K +E+++ L +F L++ L RAR G
Sbjct: 563 VKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIEL-------RAR---------G 606
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEM------KNHPLCQP---DVFTYSTLIKPC 213
P+ TY AL+ +C ++D+A++ EM N +C +F + + C
Sbjct: 607 LTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEAC 666
Query: 214 V---DAFKFDLVELLYEDMA-------------------------ARSIMPNTVTQNIVL 245
+ FDL+ Y+ + + ++PN + N+ +
Sbjct: 667 LLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAI 726
Query: 246 SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGI 305
+G KAGK + K+ S +L S PD +T +I G I+ ++ GI
Sbjct: 727 AGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGI 786
Query: 306 EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEY 365
P T+N LI K D+ ++ + + TYN +I+ G+
Sbjct: 787 IPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMR 846
Query: 366 TFDQMRAEGM 375
++M +G+
Sbjct: 847 LKEKMIEKGL 856
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 136/303 (44%), Gaps = 9/303 (2%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+NTV + + +W +A+ +FD L E + E + L+ L K + +AR +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL-LLDTLCKEKRVEQARVVL 213
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
+ + P+ T+ + +C++N ++EA + EMK H +P V +Y+T+I+
Sbjct: 214 LQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF-RPCVISYTTIIRCYCQ 271
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
F+F V + +M A PN++T ++S +F++ +V + M + + CKPD
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-KRSGCKPDSL 330
Query: 276 TMNTIISVFGNMGQIDMMEKWYE-KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
N +I G+++ E+ + + G+ T T+N +I Y DK +++
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 335 MR--KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE-GMKADSKTFCCLINGFAN 391
M L P TY ++ + GD + +M + + D T+ LI
Sbjct: 391 MESSNLCNP-DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 392 AGL 394
A +
Sbjct: 450 ANM 452
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
+++ + + NT + N++L K + +Q VL + + P+ T N I +
Sbjct: 177 IFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL--KSHITPNAHTFNIFIHGW 234
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+++ ++ + G P ++ +I Y ++ + K+ ++ M P +
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV--ISTV 402
TY ++ + + + +M+ G K DS + CLI+ A AG + + V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 403 QLAEKFEIAENTTFYNAVLSA-CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
++ E ++ NT+ YN++++ C E+ +E + + N C PD TY ++ + K
Sbjct: 355 EMPE-LGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 462 EG 463
G
Sbjct: 414 RG 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 112/277 (40%), Gaps = 8/277 (2%)
Query: 216 AFKFDLVELLYEDMAARSIMP-NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A K+D ++ E M ++ NTV + ++ + AG++++ + + E + +
Sbjct: 134 AKKWDRMKEFVERMRGDKLVTLNTVAK--IMRRFAGAGEWEEAVGIFDRLGE-FGLEKNT 190
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
+MN ++ +++ + ++ I P TFNI I + K ++ ++
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
M+ F +Y +I + + + +M A G +S T+ +++
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK-RMKDNQCPPDDTTYT 453
F + + ++ ++ FYN ++ +A L E ERVF+ M + + +TY
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 454 IMIEAYRKEGMNDKIYYL--EQEKKTMITDGIKVSQP 488
MI Y DK L E E + + QP
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 136/303 (44%), Gaps = 9/303 (2%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
+NTV + + +W +A+ +FD L E + E + L+ L K + +AR +
Sbjct: 155 LNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNL-LLDTLCKEKRVEQARVVL 213
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
+ + P+ T+ + +C++N ++EA + EMK H +P V +Y+T+I+
Sbjct: 214 LQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF-RPCVISYTTIIRCYCQ 271
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
F+F V + +M A PN++T ++S +F++ +V + M + + CKPD
Sbjct: 272 QFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM-KRSGCKPDSL 330
Query: 276 TMNTIISVFGNMGQIDMMEKWYE-KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
N +I G+++ E+ + + G+ T T+N +I Y DK +++
Sbjct: 331 FYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDEEDKAIELLKE 390
Query: 335 MR--KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE-GMKADSKTFCCLINGFAN 391
M L P TY ++ + GD + +M + + D T+ LI
Sbjct: 391 MESSNLCNP-DVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTYTFLIQRLCR 449
Query: 392 AGL 394
A +
Sbjct: 450 ANM 452
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/242 (20%), Positives = 106/242 (43%), Gaps = 6/242 (2%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
+++ + + NT + N++L K + +Q VL + + P+ T N I +
Sbjct: 177 IFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVLLQL--KSHITPNAHTFNIFIHGW 234
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+++ ++ + G P ++ +I Y ++ + K+ ++ M P +
Sbjct: 235 CKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNS 294
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV--ISTV 402
TY ++ + + + +M+ G K DS + CLI+ A AG + + V
Sbjct: 295 ITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRV 354
Query: 403 QLAEKFEIAENTTFYNAVLSA-CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
++ E ++ NT+ YN++++ C E+ +E + + N C PD TY ++ + K
Sbjct: 355 EMPE-LGVSINTSTYNSMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFK 413
Query: 462 EG 463
G
Sbjct: 414 RG 415
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/277 (19%), Positives = 112/277 (40%), Gaps = 8/277 (2%)
Query: 216 AFKFDLVELLYEDMAARSIMP-NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
A K+D ++ E M ++ NTV + ++ + AG++++ + + E + +
Sbjct: 134 AKKWDRMKEFVERMRGDKLVTLNTVAK--IMRRFAGAGEWEEAVGIFDRLGE-FGLEKNT 190
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
+MN ++ +++ + ++ I P TFNI I + K ++ ++
Sbjct: 191 ESMNLLLDTLCKEKRVEQARVVLLQLKSH-ITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
M+ F +Y +I + + + +M A G +S T+ +++
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK-RMKDNQCPPDDTTYT 453
F + + ++ ++ FYN ++ +A L E ERVF+ M + + +TY
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 454 IMIEAYRKEGMNDKIYYL--EQEKKTMITDGIKVSQP 488
MI Y DK L E E + + QP
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQP 406
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 111/241 (46%), Gaps = 38/241 (15%)
Query: 118 VFDMLKEHSFYE--PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLA 175
V ++L+E Y KEG ++I L GK+G A+++F M C S ++ ALL+
Sbjct: 93 VEEILEEQKKYRDMSKEGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLS 152
Query: 176 AYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
AY S D + NE+ +PD+ +Y+TLIK + L +++ + +
Sbjct: 153 AYRLSKKFDVVEELFNELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLK 212
Query: 236 PNTVTQN-IVLSGYGKAGKFDQMEKVLSSMLE---------------------------- 266
P+ VT N ++LS Y K G+F+ E++ + M+E
Sbjct: 213 PDIVTFNTLLLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELVN 271
Query: 267 ------STSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
++ KPDV++ N +I N G++D E WY++ G P+ TF +L+ A
Sbjct: 272 LFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMC 331
Query: 321 K 321
K
Sbjct: 332 K 332
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 82/175 (46%)
Query: 219 FDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMN 278
F+ + ++E+M R + ++ N +LS Y + KFD +E++ + + S KPD+ + N
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 279 TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
T+I + ++ N G++P+ TFN L+ + K ++ + M +
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEK 244
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
TYN + + +K + F +++A G+K D +F +I G N G
Sbjct: 245 NVAIDIRTYNARLLGLANEAKSKELVNLFGELKASGLKPDVFSFNAMIRGSINEG 299
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 126/299 (42%), Gaps = 4/299 (1%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V+ + + L +KK A E F K P TY L+ + AR++F
Sbjct: 173 VDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIV-PSAKTYSILVRGWARIRDASGARKVF 231
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M+E C Y ALL A C+S +D + + EM N L +PD ++++ I D
Sbjct: 232 DEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGL-KPDAYSFAIFIHAYCD 290
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
A + + M ++PN T N ++ K K D +L M++ + PD W
Sbjct: 291 AGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGA-NPDTW 349
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
T N+I++ + +++ K + P+ T+N+++ + +D+ + + E M
Sbjct: 350 TYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGM 409
Query: 336 RKLQFPWTTSTYNNVIEAFT-DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+ +F T +TY +I G + F+ M EG+ S T L N G
Sbjct: 410 SERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWG 468
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 146/356 (41%), Gaps = 15/356 (4%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEG----CDPSPETYTALLAAYCRSNLLDEAFSI 189
+Y L+ +LG S Q L+ +IE + S + + + AY R+NL EA
Sbjct: 104 SYHILVEILGSSKQ---FALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRA 160
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
N M + +P V L+ D + + + I+P+ T +I++ G+
Sbjct: 161 FNRMVEFGI-KPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWA 219
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ KV MLE +C D+ N ++ G +D K +++ N G++P+
Sbjct: 220 RIRDASGARKVFDEMLER-NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDA 278
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+F I I AY V++ M++ T+N++I+ + D+
Sbjct: 279 YSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDE 338
Query: 370 MRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
M +G D+ T+ ++ + ++ + ++ + + YN VL +
Sbjct: 339 MIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGR 398
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAY-RKEG-MNDKIYYLEQEKKTMITDGI 483
+++ M + + P TYT+MI RK+G + + Y E MI +GI
Sbjct: 399 FDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEM----MIDEGI 450
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 129/334 (38%), Gaps = 3/334 (0%)
Query: 123 KEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNL 182
+E++++E + + ++ P A + F M+E G P + LL + C
Sbjct: 129 REYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKH 188
Query: 183 LDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQN 242
++ A + K + P TYS L++ ++++M R+ + + + N
Sbjct: 189 VNHAQEFFGKAKGFGIV-PSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYN 247
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
+L K+G D K+ M + KPD ++ I + + G + K ++ +
Sbjct: 248 ALLDALCKSGDVDGGYKMFQEM-GNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKR 306
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
+ + P TFN +I K D +++ M + T TYN+++ D +
Sbjct: 307 YDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNR 366
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-LAEKFEIAENTTFYNAVL 421
+M D T+ ++ G F + + ++E+ T+ +
Sbjct: 367 ATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIH 426
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
K L E R F+ M D PP TT ++
Sbjct: 427 GLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+ +A+ +F+++K++ F E T L+ LG++ A+ LF + +E P+ T
Sbjct: 242 KERKKAVGIFELMKKYKFKIGVE-TINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMT 299
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
YT LL +CR L EA I N+M +H L +PD+ ++ +++ + + K L+ M
Sbjct: 300 YTVLLNGWCRVRNLIEAARIWNDMIDHGL-KPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 358
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
++ PN + I++ + K + + M++S +PD +I+ FG +
Sbjct: 359 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKK 417
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+D + + ++ + G P+ +T+N LI ++M + + + M + + + T+N
Sbjct: 418 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 477
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+++++ + + +D+M +G+ D ++ LI G + G
Sbjct: 478 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 521
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 159/378 (42%), Gaps = 23/378 (6%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A F E + TY ++ +L K+ Q + M +G + ET+T +
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM 235
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A+ + +A I MK + + V T + L+ A ++L++ + R
Sbjct: 236 KAFAAAKERKKAVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 293
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII-SVFGNMGQIDMM 293
PN +T ++L+G+ + + ++ + M++ KPD+ N ++ + +M + D +
Sbjct: 294 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY---MRKLQFPWTTSTYNNV 350
K + ++ G P R++ I+I + K+ M T +EY M + Y +
Sbjct: 353 -KLFHVMKSKGPCPNVRSYTIMIRDFCKQ---SSMETAIEYFDDMVDSGLQPDAAVYTCL 408
Query: 351 IEAFTDVGDAKNMEYTFD---QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
I F G K ++ ++ +M+ +G D KT+ LI AN + +
Sbjct: 409 ITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 465
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN-D 466
EI + +N ++ + A + V+ M PDD +YT++I EG + +
Sbjct: 466 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 525
Query: 467 KIYYLEQEKKTMITDGIK 484
YLE+ M+ G+K
Sbjct: 526 ACRYLEE----MLDKGMK 539
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/284 (22%), Positives = 140/284 (49%), Gaps = 4/284 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+ +A+ +F+++K++ F E T L+ LG++ A+ LF + +E P+ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVE-TINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMT 300
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
YT LL +CR L EA I N+M +H L +PD+ ++ +++ + + K L+ M
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDHGL-KPDIVAHNVMLEGLLRSMKKSDAIKLFHVM 359
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
++ PN + I++ + K + + M++S +PD +I+ FG +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKK 418
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+D + + ++ + G P+ +T+N LI ++M + + + M + + + T+N
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNM 478
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+++++ + + +D+M +G+ D ++ LI G + G
Sbjct: 479 IMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEG 522
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 159/378 (42%), Gaps = 23/378 (6%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A F E + TY ++ +L K+ Q + M +G + ET+T +
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGL-LTMETFTIAM 236
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A+ + +A I MK + + V T + L+ A ++L++ + R
Sbjct: 237 KAFAAAKERKKAVGIFELMKKYKF-KIGVETINCLLDSLGRAKLGKEAQVLFDKLKER-F 294
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII-SVFGNMGQIDMM 293
PN +T ++L+G+ + + ++ + M++ KPD+ N ++ + +M + D +
Sbjct: 295 TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDH-GLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY---MRKLQFPWTTSTYNNV 350
K + ++ G P R++ I+I + K+ M T +EY M + Y +
Sbjct: 354 -KLFHVMKSKGPCPNVRSYTIMIRDFCKQ---SSMETAIEYFDDMVDSGLQPDAAVYTCL 409
Query: 351 IEAFTDVGDAKNMEYTFD---QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
I F G K ++ ++ +M+ +G D KT+ LI AN + +
Sbjct: 410 ITGF---GTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQ 466
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN-D 466
EI + +N ++ + A + V+ M PDD +YT++I EG + +
Sbjct: 467 NEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSRE 526
Query: 467 KIYYLEQEKKTMITDGIK 484
YLE+ M+ G+K
Sbjct: 527 ACRYLEE----MLDKGMK 540
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 156/351 (44%), Gaps = 9/351 (2%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T+ L+ + S AR + + E G + YT L+++ +S +D F +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
++M N + + ++ T+ LI C A + Y + ++++ P+ V N ++S G
Sbjct: 525 FHQMSNSGV-EANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACG 583
Query: 250 KAGKFDQMEKVLSSM-LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
++G D+ VL+ M E+ PD ++ ++ N GQ++ ++ Y+ +GI
Sbjct: 584 QSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGT 643
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
+ I + + K +D ++ + M++ ++ +I+ G AK ++ F
Sbjct: 644 PEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDV---AGHAKMLDEAFG 700
Query: 369 QM---RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
+ +++G++ + ++ L+ NA + K + + + ++ + NA+++A
Sbjct: 701 ILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALC 760
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYT-IMIEAYRKEGMNDKIYYLEQEK 475
+ L + +K P+ TY+ +M+ + RK+ L Q K
Sbjct: 761 EGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLASERKDDFEVSFKLLSQAK 811
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 107/275 (38%), Gaps = 40/275 (14%)
Query: 116 LEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLA 175
EVF + +S E T+ LI ++GQ +A + + + P + AL++
Sbjct: 522 FEVFHQM-SNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALIS 580
Query: 176 AYCRSNLLDEAFSILNEMK--NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
A +S +D AF +L EMK HP+ PD + L+K C +A + + + +Y+ +
Sbjct: 581 ACGQSGAVDRAFDVLAEMKAETHPI-DPDHISIGALMKACCNAGQVERAKEVYQMIHKYG 639
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN------- 286
I I ++ K+G +D + M E PD + +I V G+
Sbjct: 640 IRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEK-DVTPDEVFFSALIDVAGHAKMLDEA 698
Query: 287 ----------------------MGQIDMMEKW------YEKFRNFGIEPETRTFNILIGA 318
MG + W YEK ++ + P T N LI A
Sbjct: 699 FGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITA 758
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ K ++ ++ L T TY+ ++ A
Sbjct: 759 LCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLMLA 793
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 2/162 (1%)
Query: 299 KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
+F + P TFN+L+ + + V+ +++ Y +I + G
Sbjct: 457 RFTKLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSG 516
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
M F QM G++A+ TF LI+G A AG K + + + +N
Sbjct: 517 KVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFN 576
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCP--PDDTTYTIMIEA 458
A++SAC ++ + V MK P PD + +++A
Sbjct: 577 ALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKA 618
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/367 (18%), Positives = 168/367 (45%), Gaps = 28/367 (7%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+W +++F+ +++H + TY I +G + +A +++ ++ +E +
Sbjct: 113 RWQDLIQLFEWMQQHG--KISVSTYSSCIKFVG-AKNVSKALEIYQSIPDESTKINVYIC 169
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKF--DLVELLYED 228
++L+ ++ LD + ++MK L +PDV TY+TL+ C+ +EL+ E
Sbjct: 170 NSILSCLVKNGKLDSCIKLFDQMKRDGL-KPDVVTYNTLLAGCIKVKNGYPKAIELIGE- 227
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM-LESTSCKPDVWTMNTIISVFGNM 287
+ I ++V VL+ G+ ++ E + M +E S P+++ +++++ +
Sbjct: 228 LPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGHS--PNIYHYSSLLNSYSWK 285
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
G ++ + ++ G+ P L+ Y K ++D+ ++ + + Y
Sbjct: 286 GDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPY 345
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+++ + G + FD M+ +G+++D G+AN+ + + + + E
Sbjct: 346 CMLMDGLSKAGKLEEARSIFDDMKGKGVRSD---------GYANSIMISALCRSKRFKEA 396
Query: 408 FEIAENT---------TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
E++ ++ N +L A +A ++ + R+ K+M + PD T+ I+I+
Sbjct: 397 KELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKY 456
Query: 459 YRKEGMN 465
+ KE ++
Sbjct: 457 FIKEKLH 463
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 126/295 (42%), Gaps = 3/295 (1%)
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
+ + + AYCR+ +D A + MK +P+V Y+T++ V + D Y+ M
Sbjct: 160 FRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRM 219
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
P+ T NI+++GY ++ KFD + M E C+P+V + NT+I F + G+
Sbjct: 220 GKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEK-GCEPNVVSFNTLIRGFLSSGK 278
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
I+ K + G T IL+ G + R+ D V++ + K P + Y
Sbjct: 279 IEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLP-SEFDYG 337
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+++E A +++ +G L+ G +G K ++
Sbjct: 338 SLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNA 397
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
I ++ +N +L ++ + R+ PD+TTY +++ + KEG
Sbjct: 398 GILPDSVTFNLLLRDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEG 452
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 133/322 (41%), Gaps = 45/322 (13%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL FD +K +P G Y ++ KSG +A + + M +E P T+ L+
Sbjct: 176 ALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILI 235
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARS 233
YCRS+ D A + EMK C+P+V +++TLI+ + + K + V++ YE M
Sbjct: 236 NGYCRSSKFDLALDLFREMKEKG-CEPNVVSFNTLIRGFLSSGKIEEGVKMAYE-MIELG 293
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQM---------EKVLSSMLESTSC-------------- 270
+ T I++ G + G+ D ++VL S + S
Sbjct: 294 CRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAM 353
Query: 271 -----------KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
P T++ G+ + + EK N GI P++ TFN+L+
Sbjct: 354 EMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLL--- 410
Query: 320 GKKRMYDKMSTVMEYMRKLQ----FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
+ ST +R L + +TY+ ++ FT G K E ++M + M
Sbjct: 411 -RDLCSSDHSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDM 469
Query: 376 KADSKTFCCLINGFANAGLFHK 397
D T+ L++G + G F +
Sbjct: 470 LPDIFTYNRLMDGLSCTGKFSR 491
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 88/225 (39%), Gaps = 2/225 (0%)
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
+ Y +A K D +M KP+V NT+++ + G +D ++Y++
Sbjct: 163 AIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKE 222
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
+P+ TFNILI Y + +D + M++ ++N +I F G +
Sbjct: 223 RAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEG 282
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLS 422
+M G + T L++G G V L K + + + V
Sbjct: 283 VKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEK 342
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
C + + + ME + + K Q P T ++E RK G +K
Sbjct: 343 LCGENKAVRAMEMMEELWKKGQTPC-FIACTTLVEGLRKSGRTEK 386
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 7/244 (2%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+Y LI L K G A L MI+EG +P+ TYTA++ C+ L+EAF + N +
Sbjct: 279 SYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRI 338
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ + + D F Y TLI + + DM R I P+ +T N V++G AG+
Sbjct: 339 LSVGI-EVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGR 397
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ ++V S DV T +T++ + + ID + + +F I + N
Sbjct: 398 VSEADEV------SKGVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCN 451
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
IL+ A+ Y + + M ++ T+TY +I+ + G + F+++R
Sbjct: 452 ILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKS 511
Query: 374 GMKA 377
+ A
Sbjct: 512 SVSA 515
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/362 (21%), Positives = 156/362 (43%), Gaps = 15/362 (4%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVL-LGKSGQPHRARQLFTTMIEEGC-D 164
+EK + A+EV +M+ + P + ++ K G+P A F + ++ G
Sbjct: 145 VEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLV 204
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD-LVE 223
P+ TYT L++A C+ +DE ++ +++ + D YS I FK LV+
Sbjct: 205 PNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGF-EFDCVFYSNWIHG---YFKGGALVD 260
Query: 224 LLYED--MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
L +D M + + + V+ +I++ G K G ++ +L M++ +P++ T II
Sbjct: 261 ALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE-GVEPNLITYTAII 319
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
MG+++ + + + GIE + + LI +K ++ +++ M +
Sbjct: 320 RGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQ 379
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+ TYN VI G + ++G+ D T+ L++ + V+
Sbjct: 380 PSILTYNTVINGLCMAGRVSEADEV-----SKGVVGDVITYSTLLDSYIKVQNIDAVLEI 434
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ + +I + N +L A E + +++ M + PD TY MI+ Y K
Sbjct: 435 RRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCK 494
Query: 462 EG 463
G
Sbjct: 495 TG 496
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 11/274 (4%)
Query: 121 MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRS 180
M+KE EP TY +I L K G+ A LF ++ G + Y L+ CR
Sbjct: 303 MIKEG--VEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRK 360
Query: 181 NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVT 240
L+ AFS+L +M+ + QP + TY+T+I A + D ++ ++ + +T
Sbjct: 361 GNLNRAFSMLGDMEQRGI-QPSILTYNTVINGLCMAGRVS-----EADEVSKGVVGDVIT 414
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF 300
+ +L Y K D + ++ LE+ D+ N ++ F MG + Y
Sbjct: 415 YSTLLDSYIKVQNIDAVLEIRRRFLEA-KIPMDLVMCNILLKAFLLMGAYGEADALYRAM 473
Query: 301 RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA 360
+ P+T T+ +I Y K ++ + +RK YN +I+A G
Sbjct: 474 PEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRKSSVSAAV-CYNRIIDALCKKGML 532
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGF-ANAG 393
++ +G+ D T L++ AN G
Sbjct: 533 DTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/303 (22%), Positives = 128/303 (42%), Gaps = 10/303 (3%)
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP-DVFTYSTLIKPCVDAFKFD 220
G PS T+ +L+ + +D A +L M N + P D F S +I K +
Sbjct: 129 GAFPSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPE 188
Query: 221 LVELLYEDMAARSIM-PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD-VWTMN 278
L +E ++ PN VT ++S + GK D++ ++ LE + D V+ N
Sbjct: 189 LALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRR-LEDEGFEFDCVFYSN 247
Query: 279 TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
I F +D + + E G+ + +++ILI K+ ++ ++ M K
Sbjct: 248 WIHGYFKGGALVDALMQDREMVEK-GMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKE 306
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
TY +I +G + F+++ + G++ D + LI+G G ++
Sbjct: 307 GVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGNLNRA 366
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
S + E+ I + YN V++ A + E + V K + D TY+ ++++
Sbjct: 367 FSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGV-----VGDVITYSTLLDS 421
Query: 459 YRK 461
Y K
Sbjct: 422 YIK 424
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 5/203 (2%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y +I L K G +A L + G + TY +L+ C+ L EA + + ++
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLE 717
Query: 195 NHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
N L P TY LI C + D E L + M ++ ++PN + N ++ GY K G+
Sbjct: 718 NIGLV-PSEVTYGILIDNLCKEGLFLD-AEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQ 775
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ +V+S + PD +T++++I + G ++ + +F++ I + F
Sbjct: 776 TEDAMRVVSRKMMG-RVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFL 834
Query: 314 ILI-GAYGKKRMYDKMSTVMEYM 335
LI G K RM + + E +
Sbjct: 835 FLIKGFCTKGRMEEARGLLREML 857
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 124/304 (40%), Gaps = 21/304 (6%)
Query: 139 IVLLGKSGQPHRARQLFTTMIEEGCDPS-PETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
I+LL K G A +++ M +G + P T L RS LD ++N +
Sbjct: 593 ILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRS--LDAYLLVVNAGET-T 649
Query: 198 LCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
L DV Y+ +I C + F + L +R + NT+T N +++G + G +
Sbjct: 650 LSSMDVIDYTIIINGLCKEGFLVKALNLC-SFAKSRGVTLNTITYNSLINGLCQQGCLVE 708
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
++ S LE+ P T +I G EK + + G+ P +N ++
Sbjct: 709 ALRLFDS-LENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIV 767
Query: 317 GAYGK-KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
Y K + D M V M P T +++I+ + GD + F + + + +
Sbjct: 768 DGYCKLGQTEDAMRVVSRKMMGRVTP-DAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 376 KADSKTFCCLINGFANA-------GLFHKVI---STVQLAEKF--EIAENTTFYNAVLSA 423
AD F LI GF GL +++ S V+L + E+AE+ + ++
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVEL 886
Query: 424 CTKA 427
C +
Sbjct: 887 CEQG 890
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 87/178 (48%), Gaps = 8/178 (4%)
Query: 96 VNTVTED--LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQ 153
+NT+T + ++ ++ ++AL +FD L E+ P E TY LI L K G A +
Sbjct: 688 LNTITYNSLINGLCQQGCLVEALRLFDSL-ENIGLVPSEVTYGILIDNLCKEGLFLDAEK 746
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
L +M+ +G P+ Y +++ YC+ ++A +++ K PD FT S++IK
Sbjct: 747 LLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSR-KMMGRVTPDAFTVSSMIKGY 805
Query: 214 VDAFKFDLVELL--YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
K D+ E L + + ++I + ++ G+ G+ ++ +L ML S S
Sbjct: 806 CK--KGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSES 861
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP-DVWTMNTIISVFGNMGQIDMME 294
P+++T ++ + + G+ D +VL M P D + + +IS F +G+ ++
Sbjct: 132 PSSLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELAL 191
Query: 295 KWYEKFRNFGI-EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
++E + G+ P T+ L+ A + D++ ++ + F + Y+N I
Sbjct: 192 GFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHG 251
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
+ G + +M +GM D ++ LI+G + G + + + K + N
Sbjct: 252 YFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPN 311
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
Y A++ K L E +F R+ D+ Y +I+ ++G
Sbjct: 312 LITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKG 361
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 154/353 (43%), Gaps = 32/353 (9%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
KL+ +L + G+PH A+ +F T+ E G PS +YT LLAA SI++E++
Sbjct: 50 KLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQS 109
Query: 197 PLCQPDVFTYSTLIKPCVDAFKF-DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFD 255
+F ++ +I ++ D V+ L + M + P T T N ++ GYG AGK +
Sbjct: 110 GTKLDSIF-FNAVINAFSESGNMEDAVQALLK-MKELGLNPTTSTYNTLIKGYGIAGKPE 167
Query: 256 QMEKVLSSMLE--STSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ ++L MLE + P++ T N ++ + +++ + +K G+ P+T T+N
Sbjct: 168 RSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYN 227
Query: 314 ILIGAYGKK-RMYDKMSTVMEYM-RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+ Y +K S V+E M K + T V+ + G ++ +M+
Sbjct: 228 TIATCYVQKGETVRAESEVVEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMK 287
Query: 372 AEGMKADSKTFCCLINGFAN-------------------------AGLFHKVISTVQLAE 406
++A+ F LINGF G + + L +
Sbjct: 288 EMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMK 347
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
+ + + Y+ V++A + A + + +VFK M PD Y+I+ + Y
Sbjct: 348 ECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGY 400
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 177/418 (42%), Gaps = 71/418 (16%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
N V SE + +QAL +KE P TY LI G +G+P R+ +L
Sbjct: 119 NAVINAFSESGNMEDAVQALL---KMKELGL-NPTTSTYNTLIKGYGIAGKPERSSELLD 174
Query: 157 TMIEEG---CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
M+EEG P+ T+ L+ A+C+ ++EA+ ++ +M+ + +PD TY+T+
Sbjct: 175 LMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGV-RPDTVTYNTIATCY 233
Query: 214 VDA-----FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLEST 268
V + ++VE + A+ PN T IV+ GY + G+ + + M E
Sbjct: 234 VQKGETVRAESEVVEKMVMKEKAK---PNGRTCGIVVGGYCREGRVRDGLRFVRRMKE-M 289
Query: 269 SCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT-----FNILIGAYGKKR 323
+ ++ N++I+ F +++M++ GI+ T T FN + G ++
Sbjct: 290 RVEANLVVFNSLINGF-----VEVMDR-------DGIDEVTLTLLLMSFNEEVELVGNQK 337
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
M + V+ M++ TY+ V+ A++ G + F +M G+K D+ +
Sbjct: 338 MKVQ---VLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 394
Query: 384 CLINGFA---------------------NAGLFHKVIS-------------TVQLAEKFE 409
L G+ N +F VIS KF
Sbjct: 395 ILAKGYVRAKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFG 454
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
++ N + ++ + + + E V + M+ P+++T+ ++ EA+R G+ D+
Sbjct: 455 VSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDE 512
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/204 (20%), Positives = 92/204 (45%), Gaps = 4/204 (1%)
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK 322
S +E +SC+ V + +++V G+ + ++ G P ++ L+ A +
Sbjct: 35 SCVEGSSCR-TVRSRTKLMNVLIERGRPHEAQTVFKTLAETGHRPSLISYTTLLAAMTVQ 93
Query: 323 RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
+ Y +S+++ + + + +N VI AF++ G+ ++ +M+ G+ + T+
Sbjct: 94 KQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQALLKMKELGLNPTTSTY 153
Query: 383 CCLINGFANAGLFHKVISTVQLA---EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
LI G+ AG + + L ++ N +N ++ A K + + E V K+
Sbjct: 154 NTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKKKKVEEAWEVVKK 213
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG 463
M++ PD TY + Y ++G
Sbjct: 214 MEECGVRPDTVTYNTIATCYVQKG 237
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 83/184 (45%), Gaps = 3/184 (1%)
Query: 153 QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP 212
Q+ T M E TY+ ++ A+ + +++A + EM + +PD YS L K
Sbjct: 341 QVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGV-KPDAHAYSILAKG 399
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
V A + E L E + S PN V V+SG+ G D +V + M + P
Sbjct: 400 YVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKMCK-FGVSP 457
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVM 332
++ T T++ + + Q E+ + R G++PE TF +L A+ + D+ + +
Sbjct: 458 NIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAI 517
Query: 333 EYMR 336
++
Sbjct: 518 NALK 521
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 7/300 (2%)
Query: 125 HSF-YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
HSF P Y + + +G RA +F + E G P YT ++ YC
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 184 DEAFSILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
D+AF + +P P + T + LI C E ++ +M + + VT
Sbjct: 425 DKAFQYFGALLKSGNP---PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N ++ GYGK + +++ +++ M S PDV T N +I G ID + +
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEM-RSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
G P T F +IG + K+ + + + YM L+ T + ++ + +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
F+++ G+K D + LI+G+ + G K + L + + N + ++A++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 145/344 (42%), Gaps = 10/344 (2%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K G+P A +L + P+ Y++ L+ C + + A +I E+ L PD
Sbjct: 353 KVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDC 408
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
Y+T+I + + D + + P+ T I++ + G E V +
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M ++ K DV T N ++ +G Q++ + + ++ R+ GI P+ T+NILI + +
Sbjct: 469 M-KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
D+ + ++ + + F +T + +VI F+ GD + + M MK D T
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
L++G+ A K I + + YN ++ D+ + + M
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQ 487
P+++T+ ++ G+ K + + +M+ + I V++
Sbjct: 648 GMLPNESTHHALV-----LGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 140/335 (41%), Gaps = 7/335 (2%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P G + L+ + + AR+ M+ G + + + YC D+ + +
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 190 LNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L MK++ + +PD+ ++ I K C F + +L++ + I ++V+ + V+ G+
Sbjct: 294 LMGMKHYGI-RPDIVAFTVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGF 351
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK ++ K ++ S +P+++ ++ +S + G + +++ G+ P+
Sbjct: 352 CKVGKPEEAIK----LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
+ +I Y DK + K P + +T +I A + G + E F
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M+ EG+K D T+ L++G+ +KV + I+ + YN ++ +
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ E + + P +T +I + K G
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY L+ GK+ Q ++ +L M G P TY L+ + +DEA I++E+
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
P ++ +I F +L+ MA + P+ VT + +L GY KA +
Sbjct: 540 IRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ + + +L++ KPDV NT+I + ++G I+ + G+ P T +
Sbjct: 599 MEKAIVLFNKLLDA-GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 314 ILI-GAYGKK 322
L+ G GK+
Sbjct: 658 ALVLGLEGKR 667
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 125/300 (41%), Gaps = 7/300 (2%)
Query: 125 HSF-YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLL 183
HSF P Y + + +G RA +F + E G P YT ++ YC
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 184 DEAFSILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
D+AF + +P P + T + LI C E ++ +M + + VT
Sbjct: 425 DKAFQYFGALLKSGNP---PSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTY 481
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N ++ GYGK + +++ +++ M S PDV T N +I G ID + +
Sbjct: 482 NNLMHGYGKTHQLNKVFELIDEM-RSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
G P T F +IG + K+ + + + YM L+ T + ++ + +
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
F+++ G+K D + LI+G+ + G K + L + + N + ++A++
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/344 (20%), Positives = 145/344 (42%), Gaps = 10/344 (2%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K G+P A +L + P+ Y++ L+ C + + A +I E+ L PD
Sbjct: 353 KVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL-LPDC 408
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
Y+T+I + + D + + P+ T I++ + G E V +
Sbjct: 409 VCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRN 468
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M ++ K DV T N ++ +G Q++ + + ++ R+ GI P+ T+NILI + +
Sbjct: 469 M-KTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
D+ + ++ + + F +T + +VI F+ GD + + M MK D T
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCS 587
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
L++G+ A K I + + YN ++ D+ + + M
Sbjct: 588 ALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQR 647
Query: 444 QCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQ 487
P+++T+ ++ G+ K + + +M+ + I V++
Sbjct: 648 GMLPNESTHHALV-----LGLEGKRFVNSETHASMLLEEIIVAK 686
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/335 (19%), Positives = 140/335 (41%), Gaps = 7/335 (2%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P G + L+ + + AR+ M+ G + + + YC D+ + +
Sbjct: 234 PSRGVCISLLKEILRVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWEL 293
Query: 190 LNEMKNHPLCQPDVFTYSTLI-KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L MK++ + +PD+ ++ I K C F + +L++ + I ++V+ + V+ G+
Sbjct: 294 LMGMKHYGI-RPDIVAFTVFIDKLCKAGFLKEATSVLFK-LKLFGISQDSVSVSSVIDGF 351
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K GK ++ K ++ S +P+++ ++ +S + G + +++ G+ P+
Sbjct: 352 CKVGKPEEAIK----LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPD 407
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
+ +I Y DK + K P + +T +I A + G + E F
Sbjct: 408 CVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFR 467
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M+ EG+K D T+ L++G+ +KV + I+ + YN ++ +
Sbjct: 468 NMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRG 527
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ E + + P +T +I + K G
Sbjct: 528 YIDEANEIISELIRRGFVPSTLAFTDVIGGFSKRG 562
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 87/190 (45%), Gaps = 3/190 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY L+ GK+ Q ++ +L M G P TY L+ + +DEA I++E+
Sbjct: 480 TYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISEL 539
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
P ++ +I F +L+ MA + P+ VT + +L GY KA +
Sbjct: 540 IRRGFV-PSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQR 598
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ + + +L++ KPDV NT+I + ++G I+ + G+ P T +
Sbjct: 599 MEKAIVLFNKLLDA-GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 314 ILI-GAYGKK 322
L+ G GK+
Sbjct: 658 ALVLGLEGKR 667
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 127/302 (42%), Gaps = 7/302 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A +FD LKE + P TY L+ + A +++ MI++G P + +
Sbjct: 282 EAQVLFDKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVM 339
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L RS +A + + MK+ C P+V +Y+ +I+ + ++DM
Sbjct: 340 LEGLLRSRKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSG 398
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ P+ +++G+G K D + ++L M E PD T N +I + N +
Sbjct: 399 LQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGH-PPDGKTYNALIKLMANQKMPEHA 457
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ Y K IEP TFN+++ +Y R Y+ V E M K ++Y +I
Sbjct: 458 TRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRG 517
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKA---DSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
G ++ ++M +GMK D F + +F ++ + + KF
Sbjct: 518 LIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSGKFAA 577
Query: 411 AE 412
AE
Sbjct: 578 AE 579
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/284 (22%), Positives = 138/284 (48%), Gaps = 4/284 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+ +A+ +F+++K++ F E T L+ LG++ A+ LF + +E P+ T
Sbjct: 243 KERKKAVGIFELMKKYKFKIGVE-TINCLLDSLGRAKLGKEAQVLFDKL-KERFTPNMMT 300
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
YT LL +CR L EA I N+M + L +PD+ ++ +++ + + K L+ M
Sbjct: 301 YTVLLNGWCRVRNLIEAARIWNDMIDQGL-KPDIVAHNVMLEGLLRSRKKSDAIKLFHVM 359
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
++ PN + I++ + K + + M++S +PD +I+ FG +
Sbjct: 360 KSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDS-GLQPDAAVYTCLITGFGTQKK 418
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+D + + ++ + G P+ +T+N LI ++M + + + M + + + T+N
Sbjct: 419 LDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNM 478
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+++++ + + +++M +G+ D ++ LI G G
Sbjct: 479 IMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEG 522
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 128/318 (40%), Gaps = 43/318 (13%)
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
ET LL + R+ L EA + +++K P++ TY+ L+ ++
Sbjct: 265 ETINCLLDSLGRAKLGKEAQVLFDKLKER--FTPNMMTYTVLLNGWCRVRNLIEAARIWN 322
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
DM + + P+ V N++L G ++ K K+ M C P+V + +I F
Sbjct: 323 DMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPC-PNVRSYTIMIRDFCKQ 381
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
++ ++++ + G++P+ + LI +G ++ K+ TV E ++++Q
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQK---KLDTVYELLKEMQ-------- 430
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+G D KT+ LI AN + +
Sbjct: 431 ------------------------EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQ 466
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN-D 466
EI + +N ++ + A + V++ M PDD +YT++I EG + +
Sbjct: 467 NEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSRE 526
Query: 467 KIYYLEQEKKTMITDGIK 484
YLE+ M+ G+K
Sbjct: 527 ACRYLEE----MLDKGMK 540
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 81/176 (46%), Gaps = 7/176 (3%)
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G ++RT+N ++ K R ++ M +V+E M + T T+ ++AF + K
Sbjct: 190 GFAHDSRTYNSMMSILAKTRQFETMVSVLEEM-GTKGLLTMETFTIAMKAFAAAKERKKA 248
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV-ISTVQLAEKFEIAENTTFYNAVLS 422
F+ M+ K +T CL++ A L + + +L E+F N Y +L+
Sbjct: 249 VGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF--TPNMMTYTVLLN 306
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY---RKEGMNDKIYYLEQEK 475
+ +L+E R++ M D PD + +M+E RK+ K++++ + K
Sbjct: 307 GWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSK 362
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 125/283 (44%), Gaps = 17/283 (6%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY ++ G A+++ M++ G P TYT L+ YC+ EA ++
Sbjct: 224 PNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATV 283
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+++M+ + + +P+ TY +I+ K ++++M RS MP++ V+
Sbjct: 284 MDDMEKNEI-EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALC 342
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ K D+ + ML++ +C PD ++T+I G++ K +++F I P
Sbjct: 343 EDHKVDEACGLWRKMLKN-NCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-PSL 400
Query: 310 RTFNILIGAYGKK-------RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
T+N LI +K R++D M Y RK + P TYN +IE + G+ K
Sbjct: 401 LTYNTLIAGMCEKGELTEAGRLWDDM-----YERKCK-P-NAFTYNVLIEGLSKNGNVKE 453
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
++M G + TF L G G + V +A
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMA 496
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/281 (24%), Positives = 127/281 (45%), Gaps = 7/281 (2%)
Query: 183 LDEAFSI-LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQ 241
+D A I L K+HP + TY +++ A FD VE L D+ S P +
Sbjct: 62 IDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESLMADLR-NSYPPIKCGE 120
Query: 242 NI---VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYE 298
N+ +L YG AG+++ ++ + K V ++NT+++V + D++ ++
Sbjct: 121 NLFIDLLRNYGLAGRYESSMRIFLR-IPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179
Query: 299 KFR-NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
+ +FGI P T N+L+ A KK + V++ + + TY ++ +
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFY 417
GD ++ + ++M G D+ T+ L++G+ G F + + + EK EI N Y
Sbjct: 240 GDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
Query: 418 NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
++ A K + E +F M + PD + +I+A
Sbjct: 300 GVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDA 340
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 139/334 (41%), Gaps = 6/334 (1%)
Query: 132 EGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILN 191
E ++ L+ G +G+ + ++F + + G S + LL ++ D ++
Sbjct: 120 ENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFK 179
Query: 192 EMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKA 251
K P++FT + L+K + + +++ + ++PN VT +L GY
Sbjct: 180 NSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVAR 239
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT 311
G + ++VL ML+ PD T ++ + +G+ + IEP T
Sbjct: 240 GDMESAKRVLEEMLDR-GWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVT 298
Query: 312 FNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+ ++I A K++ + + + M + F +S VI+A + + +M
Sbjct: 299 YGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKML 358
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF--YNAVLSACTKAED 429
D+ LI+ G +V +L ++FE + YN +++ + +
Sbjct: 359 KNNCMPDNALLSTLIHWLCKEG---RVTEARKLFDEFEKGSIPSLLTYNTLIAGMCEKGE 415
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L E R++ M + +C P+ TY ++IE K G
Sbjct: 416 LTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNG 449
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 123/302 (40%), Gaps = 3/302 (0%)
Query: 162 GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDL 221
G P+ T L+ A C+ N ++ A+ +L+E+ + L P++ TY+T++ V +
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLV-PNLVTYTTILGGYVARGDMES 244
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
+ + E+M R P+ T +++ GY K G+F + V+ M E +P+ T +I
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDM-EKNEIEPNEVTYGVMI 303
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
+ +++ P++ +I A + D+ + M K
Sbjct: 304 RALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCM 363
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
+ + +I G FD+ +G T+ LI G G +
Sbjct: 364 PDNALLSTLIHWLCKEGRVTEARKLFDEFE-KGSIPSLLTYNTLIAGMCEKGELTEAGRL 422
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ + N YN ++ +K ++ E RV + M + C P+ TT+ I+ E +K
Sbjct: 423 WDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Query: 462 EG 463
G
Sbjct: 483 LG 484
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 93/209 (44%), Gaps = 6/209 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A V D ++++ EP E TY +I L K + AR +F M+E P +
Sbjct: 279 EAATVMDDMEKNEI-EPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 174 LAAYCRSNLLDEAFSILNEM-KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
+ A C + +DEA + +M KN+ C PD STLI + L+++
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNN--CMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKG 395
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
SI P+ +T N +++G + G+ + ++ M E CKP+ +T N +I G +
Sbjct: 396 SI-PSLLTYNTLIAGMCEKGELTEAGRLWDDMYER-KCKPNAFTYNVLIEGLSKNGNVKE 453
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGK 321
+ E+ G P TF IL K
Sbjct: 454 GVRVLEEMLEIGCFPNKTTFLILFEGLQK 482
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 78/176 (44%), Gaps = 4/176 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A +FD + E SF P K+I L + + A L+ M++ C P + L
Sbjct: 314 EARNMFDEMLERSFM-PDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTL 372
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ C+ + EA + +E + + P + TY+TLI + + L++DM R
Sbjct: 373 IHWLCKEGRVTEARKLFDEFEKGSI--PSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
PN T N+++ G K G + +VL MLE C P+ T + +G+
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLE-IGCFPNKTTFLILFEGLQKLGK 485
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 68/157 (43%), Gaps = 4/157 (2%)
Query: 121 MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRS 180
MLK + P LI L K G+ AR+LF E+G PS TY L+A C
Sbjct: 357 MLKNNCM--PDNALLSTLIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEK 413
Query: 181 NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVT 240
L EA + ++M C+P+ FTY+ LI+ + E+M PN T
Sbjct: 414 GELTEAGRLWDDMYERK-CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTT 472
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
I+ G K GK + K++S + + + W +
Sbjct: 473 FLILFEGLQKLGKEEDAMKIVSMAVMNGKVDKESWEL 509
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/316 (20%), Positives = 134/316 (42%), Gaps = 2/316 (0%)
Query: 146 GQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFT 205
G+ A +L+ + G ++ ++ Y ++ L+EA S+L M PDV+
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYL 631
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
+ +++ D ++ LY + I N N V++ +A D++ M+
Sbjct: 632 FRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMI 691
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMY 325
P+ T N ++ V+G + + + + G+ + ++N +I AYGK + Y
Sbjct: 692 R-YGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDY 749
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
MS+ ++ M+ F + YN +++A+ + +M+ D T+ +
Sbjct: 750 TNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIM 809
Query: 386 INGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
IN + G +V ++ ++ + + YN ++ A + E + K M+
Sbjct: 810 INIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNI 869
Query: 446 PPDDTTYTIMIEAYRK 461
PD TYT ++ A R+
Sbjct: 870 IPDKVTYTNLVTALRR 885
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 134/305 (43%), Gaps = 3/305 (0%)
Query: 173 LLAAYCR-SNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
LL C+ S L +A I N K + ++ ST+I +F E LY ++ +
Sbjct: 528 LLICSCKESGQLTDAVKIYNH-KMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKS 586
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
++ + + +IV+ Y KAG ++ VL M E PDV+ ++ ++ D
Sbjct: 587 SGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQD 646
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
++ Y + R GI +N +I + D++S E M + F T T+N ++
Sbjct: 647 KLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLL 706
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
+ + K + F + G+ D ++ +I + + + S ++ + +
Sbjct: 707 DVYGKAKLFKKVNELFLLAKRHGV-VDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFS 765
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
+ YN +L A K + + + + KRMK + PD TY IMI Y ++G D++ +
Sbjct: 766 VSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADV 825
Query: 472 EQEKK 476
+E K
Sbjct: 826 LKELK 830
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/244 (20%), Positives = 107/244 (43%), Gaps = 2/244 (0%)
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
++ N V +++L G+ ++D+ E ++ + + NT+I G + +
Sbjct: 170 LVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLA 229
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
KW+ FG+ P T +L+G Y K ++ +MRK S Y+++I
Sbjct: 230 SKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIV-CESAYSSMITI 288
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
+T + E D M+ + ++ + + ++N ++ G S + E + N
Sbjct: 289 YTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPN 348
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY-RKEGMNDKIYYLE 472
YN +++ K + + +F R+ + PD+T+Y MIE + R + + +Y +
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQ 408
Query: 473 QEKK 476
+ K+
Sbjct: 409 ELKR 412
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/383 (20%), Positives = 157/383 (40%), Gaps = 43/383 (11%)
Query: 97 NTVTEDLSERI--EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
N V L R+ +++W +A ++ L ++ + +I K G A +
Sbjct: 173 NFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKW 232
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEA-FSILNEMKNHPLCQPDVFTYSTLIKPC 213
F M+E G P+ T L+ Y ++ ++EA F+ + K +C+ YS++I
Sbjct: 233 FHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCES---AYSSMITIY 289
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
+D E + + M + ++L+ Y + GK + E +L SM E+ P+
Sbjct: 290 TRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM-EAAGFSPN 348
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
+ NT+I+ +G + +++ + + + N G+EP+ ++ +I +G+ Y++
Sbjct: 349 IIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNYEE------ 402
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
++ + +++ G K +S LIN A G
Sbjct: 403 -----------------------------AKHYYQELKRCGYKPNSFNLFTLINLQAKYG 433
Query: 394 LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYT 453
I T++ + ++ +L A K + + V K N + T+++
Sbjct: 434 DRDGAIKTIEDMTGIG-CQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFS 492
Query: 454 IMIEAYRKEGMNDKIYYLEQEKK 476
++ AY K GM D L +EKK
Sbjct: 493 SLVMAYVKHGMVDDCLGLLREKK 515
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 152/399 (38%), Gaps = 45/399 (11%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
L +++ WL+ ++ S P T+ L+ L K+G +A L M E G
Sbjct: 133 LQGKLDAALWLRKKMIY------SGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLCQP------- 201
P+ +Y L+ C N +D+A + N M H LCQ
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 202 -----------------DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIV 244
D+ + L+ C ++++M+ +++ ++V N++
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 245 LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG 304
+ G +G + M++ PDV+T NT+IS G+ D + +N G
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKR-GVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGG 365
Query: 305 IEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNME 364
+ P+ ++ ++I ++ + + M K +N VI+ + GD +
Sbjct: 366 VAPDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSAL 425
Query: 365 YTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
+ M + G+K + T LI+G+ G +I +TT YN +L A
Sbjct: 426 SVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAA 485
Query: 425 TKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L +++ M C PD TYT ++ +G
Sbjct: 486 CTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKG 524
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 114/263 (43%), Gaps = 5/263 (1%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
K+G +A +++ M ++ Y ++ C S + A+ + +M + PDV
Sbjct: 277 KNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV-NPDV 335
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
FTY+TLI KFD L+ M + P+ ++ +++ G G ++ + L S
Sbjct: 336 FTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLS 395
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
ML+S+ P+V N +I +G G ++G++P T N LI Y K
Sbjct: 396 MLKSSL-LPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGG 454
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
V MR + T+TYN ++ A +G + +D+M G + D T+
Sbjct: 455 RLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYT 514
Query: 384 CLINGFANAGLFHK---VISTVQ 403
L+ G G K ++S +Q
Sbjct: 515 ELVRGLCWKGRLKKAESLLSRIQ 537
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 113/277 (40%), Gaps = 12/277 (4%)
Query: 198 LCQPDVFTY-------STLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGK 250
+CQ F Y S++++ K D L + M ++P +T N +L+G K
Sbjct: 109 VCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCK 168
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
AG ++ + ++ M E P+ + NT+I ++ +D + +GI P
Sbjct: 169 AGYIEKADGLVREMREMGP-SPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRV 227
Query: 311 TFNILIGAYGKKRMY-DKMSTVMEYM---RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
T NI++ A +K + + ++E + + P ++++ G+
Sbjct: 228 TCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEV 287
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
+ +M + + ADS + +I G ++G + K + + YN ++SA K
Sbjct: 288 WKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCK 347
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
E + M++ PD +Y ++I+ G
Sbjct: 348 EGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHG 384
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
Query: 143 GKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPD 202
G+ G A + M+ G P+ T AL+ Y + L +A+ + NEM++ + PD
Sbjct: 416 GRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKI-HPD 474
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
TY+ L+ L LY++M R P+ +T ++ G G+ + E +LS
Sbjct: 475 TTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLS 534
Query: 263 SM 264
+
Sbjct: 535 RI 536
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 131/311 (42%), Gaps = 4/311 (1%)
Query: 117 EVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
++FD + E +P T+ +I ++G P RA + F M GC+P T A++ A
Sbjct: 196 KLFDEMLERGI-KPDNATFTTIISCARQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDA 254
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP 236
Y R+ +D A S+ + + + D T+STLI+ + +D +YE+M A + P
Sbjct: 255 YGRAGNVDMALSLYDRARTEKW-RIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKP 313
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKW 296
N V N ++ G+A + Q K++ L + P+ T ++ +G D
Sbjct: 314 NLVIYNRLIDSMGRAKRPWQA-KIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAI 372
Query: 297 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS-TYNNVIEAFT 355
Y + + G+ +N L+ R D+ + + M+ + S T++++I +
Sbjct: 373 YREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYA 432
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTT 415
G E QMR G + +I + A V+ T + I +
Sbjct: 433 CSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPDDR 492
Query: 416 FYNAVLSACTK 426
F +L+ T+
Sbjct: 493 FCGCLLNVMTQ 503
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/317 (21%), Positives = 125/317 (39%), Gaps = 15/317 (4%)
Query: 161 EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN---HPLC----------QPDVFTYS 207
+ C P+ ++ + +A LN M N PL +V Y+
Sbjct: 120 DACKPNEADVCDVITGFGGKLFEQDAVVTLNNMTNPETAPLVLNNLLETMKPSREVILYN 179
Query: 208 TLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
+K + + E L+++M R I P+ T ++S + G + + M S
Sbjct: 180 VTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKM-SS 238
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
C+PD TM +I +G G +DM Y++ R + TF+ LI YG YD
Sbjct: 239 FGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDG 298
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
+ E M+ L YN +I++ + + + G + T+ L+
Sbjct: 299 CLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVR 358
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ-CP 446
+ A ++ + ++ ++ YN +LS C + E +F+ MK+ + C
Sbjct: 359 AYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCD 418
Query: 447 PDDTTYTIMIEAYRKEG 463
PD T++ +I Y G
Sbjct: 419 PDSWTFSSLITVYACSG 435
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 3/307 (0%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
KS ++ +LF M+E G P T+T +++ ++ + A +M + C+PD
Sbjct: 187 KSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEKMSSFG-CEPDN 245
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
T + +I A D+ LY+ + VT + ++ YG +G +D +
Sbjct: 246 VTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEE 305
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M ++ KP++ N +I G + + Y+ G P T+ L+ AYG+ R
Sbjct: 306 M-KALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRAR 364
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR-AEGMKADSKTF 382
D + M++ T YN ++ D F M+ E DS TF
Sbjct: 365 YGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTF 424
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
LI +A +G + + + + +V+ KA+ + ++ R F ++ +
Sbjct: 425 SSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLE 484
Query: 443 NQCPPDD 449
PDD
Sbjct: 485 LGITPDD 491
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 98/239 (41%), Gaps = 36/239 (15%)
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWY 297
+ N+ + + K+ ++ EK+ MLE KPD T TIIS G +W+
Sbjct: 175 VILYNVTMKVFRKSKDLEKSEKLFDEMLER-GIKPDNATFTTIISCARQNGVPKRAVEWF 233
Query: 298 EKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
EK +FG EP+ T +I AYG+ NV A +
Sbjct: 234 EKMSSFGCEPDNVTMAAMIDAYGRA-------------------------GNVDMALS-- 266
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFY 417
+D+ R E + D+ TF LI + +G + ++ + + + N Y
Sbjct: 267 --------LYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIY 318
Query: 418 NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
N ++ + +A+ + + ++K + N P+ +TY ++ AY + D + +E K
Sbjct: 319 NRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMK 377
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 87/208 (41%), Gaps = 38/208 (18%)
Query: 109 KKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
K+ W QA ++ L + F P TY L+ G++ A ++ M E+G +
Sbjct: 329 KRPW-QAKIIYKDLITNGF-TPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVI 386
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
Y LL+ + +DEAF I +MKN C PD +T+S+LI
Sbjct: 387 LYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLI------------------ 428
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+ Y +G+ + E L M E+ +P ++ + ++I +G
Sbjct: 429 -----------------TVYACSGRVSEAEAALLQMREA-GFEPTLFVLTSVIQCYGKAK 470
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILI 316
Q+D + + +++ GI P+ R L+
Sbjct: 471 QVDDVVRTFDQVLELGITPDDRFCGCLL 498
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/323 (22%), Positives = 132/323 (40%), Gaps = 9/323 (2%)
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
PE + L+ + ++++ +A +L+EM +PD + + L+ L+
Sbjct: 183 PELFVVLVQRFASADMVKKAIEVLDEMPKFGF-EPDEYVFGCLLDALCKHGSVKDAAKLF 241
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
EDM R N +L G+ + GK + + VL M E+ +PD+ ++S + N
Sbjct: 242 EDMRMR-FPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEA-GFEPDIVDYTNLLSGYAN 299
Query: 287 MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK-KRMYDKMSTVMEYMRKLQFPWTTS 345
G++ R G EP + +LI A K RM + M +E M + +
Sbjct: 300 AGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE-MERYECEADVV 358
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
TY ++ F G D M +G+ T+ ++ F + + ++
Sbjct: 359 TYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKM 418
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMN 465
+ E + YN V+ K ++ E R++ M++N P T+ IMI +G
Sbjct: 419 RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGC- 477
Query: 466 DKIYYLEQEKKTMITDGI-KVSQ 487
+ K M+T G+ VSQ
Sbjct: 478 --LLEASDHFKEMVTRGLFSVSQ 498
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 2/191 (1%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+EP Y L+ +G+ A L M G +P+ YT L+ A C+ + ++EA
Sbjct: 283 FEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAM 342
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ EM+ + C+ DV TY+ L+ K D ++ +DM + +MP+ +T ++
Sbjct: 343 KVFVEMERYE-CEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVA 401
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
+ K F++ +++ M PD+ N +I + +G++ + + + G+ P
Sbjct: 402 HEKKESFEECLELMEKM-RQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSP 460
Query: 308 ETRTFNILIGA 318
TF I+I
Sbjct: 461 GVDTFVIMING 471
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 3/252 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T+ L+ K G A+Q T +I+ GCDP TYT+ + +CR +D AF +
Sbjct: 153 PDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKV 212
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
EM + C + +Y+ LI +A K D L M + PN T +++
Sbjct: 213 FKEMTQNG-CHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALC 271
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+G+ + + M ES KPD +I F + +D E G+ P
Sbjct: 272 GSGQKSEAMNLFKQMSES-GIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNV 330
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
T+N LI + KK ++ M + + + + P TYN +I G+ +
Sbjct: 331 ITYNALIKGFCKKNVHKAMGLLSKMLEQNLVP-DLITYNTLIAGQCSSGNLDSAYRLLSL 389
Query: 370 MRAEGMKADSKT 381
M G+ + +T
Sbjct: 390 MEESGLVPNQRT 401
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 80/160 (50%), Gaps = 3/160 (1%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
E K+ +AL + +K+ + P TY LI L SGQ A LF M E G P
Sbjct: 237 EAKKIDEALSLLVKMKDDNCC-PNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDD 295
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE 227
YT L+ ++C + LDEA +L M + L P+V TY+ LIK + LL
Sbjct: 296 CMYTVLIQSFCSGDTLDEASGLLEHMLENGL-MPNVITYNALIKGFCKKNVHKAMGLL-S 353
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
M ++++P+ +T N +++G +G D ++LS M ES
Sbjct: 354 KMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEES 393
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/360 (20%), Positives = 147/360 (40%), Gaps = 19/360 (5%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL D + ++ +Y L+ LL P+ ++ MI+ C+ + +
Sbjct: 43 ALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITILMIK-SCNSVRDA--LFV 99
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVE---LLYEDMAA 231
+CR+ ++F I + K P C Y+ L+ +F LVE LY +M
Sbjct: 100 VDFCRTMRKGDSFEI--KYKLTPKC------YNNLLSSLA---RFGLVEEMKRLYTEMLE 148
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
+ P+ T N +++GY K G + ++ ++ ++++ C PD +T + I+ ++D
Sbjct: 149 DLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQA-GCDPDYFTYTSFITGHCRRKEVD 207
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
K +++ G ++ LI + + D+ +++ M+ TY +I
Sbjct: 208 AAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLI 267
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
+A G F QM G+K D + LI F + + ++ + +
Sbjct: 268 DALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLM 327
Query: 412 ENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
N YNA++ K +++ + + +M + PD TY +I G D Y L
Sbjct: 328 PNVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRL 386
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 149/345 (43%), Gaps = 19/345 (5%)
Query: 121 MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRA----RQLFTTMIEEGCDPSPETYTALLAA 176
+LK + P T+ LI+L P + ++ M+ G +P T + +
Sbjct: 111 ILKSQPNFRPGRSTF--LILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQVTTDIAVRS 168
Query: 177 YCRSNLLDEAFSILNEM--KNHPLCQPDVFTYSTLIK---PCVDA-FKFDLVELLYEDMA 230
C + +DEA ++ E+ K+ P PD +TY+ L+K C D ++ V+ + +D
Sbjct: 169 LCETGRVDEAKDLMKELTEKHSP---PDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDF- 224
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ P+ V+ I++ + + L S L + KPD + NTI+ F + +
Sbjct: 225 --DVKPDLVSFTILIDNVCNSKNLRE-AMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKG 281
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
Y+K + G+EP+ T+N LI K ++ ++ M + T+TY ++
Sbjct: 282 SEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSL 341
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
+ G++ ++M A G + T+ L++G A L K + ++ + +
Sbjct: 342 MNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGV 401
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
+ Y ++ + K+ + E VF D++ D + Y+ +
Sbjct: 402 KLESNGYATLVRSLVKSGKVAEAYEVFDYAVDSKSLSDASAYSTL 446
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/301 (20%), Positives = 120/301 (39%), Gaps = 3/301 (0%)
Query: 165 PSPETYTALLAAYCRS--NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P T+ LL+ CR+ + + +LN M N+ L +PD T ++ + + D
Sbjct: 120 PGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGL-EPDQVTTDIAVRSLCETGRVDEA 178
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ L +++ + P+T T N +L K + + + M + KPD+ + +I
Sbjct: 179 KDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILID 238
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
N + K N G +P+ +N ++ + + V + M++
Sbjct: 239 NVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEP 298
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
TYN +I + G + M G + D+ T+ L+NG G +S +
Sbjct: 299 DQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLL 358
Query: 403 QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+ E A N YN +L KA + + +++ MK + + Y ++ + K
Sbjct: 359 EEMEARGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKS 418
Query: 463 G 463
G
Sbjct: 419 G 419
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 92/218 (42%), Gaps = 2/218 (0%)
Query: 117 EVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
E D +++ +P ++ LI + S A L + + G P Y ++
Sbjct: 215 EFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKG 274
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP 236
+C + EA + +MK + +PD TY+TLI A + + + + M P
Sbjct: 275 FCTLSKGSEAVGVYKKMKEEGV-EPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEP 333
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKW 296
+T T +++G + G+ +L M E+ C P+ T NT++ +D +
Sbjct: 334 DTATYTSLMNGMCRKGESLGALSLLEEM-EARGCAPNDCTYNTLLHGLCKARLMDKGMEL 392
Query: 297 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
YE ++ G++ E+ + L+ + K + V +Y
Sbjct: 393 YEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVFDY 430
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/336 (23%), Positives = 141/336 (41%), Gaps = 19/336 (5%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
G MK + L + G + Q+ T G P+ Y LL A C++ + A S+++E
Sbjct: 186 GILMKGLSLTNRIGDGFKLLQIMKT---SGVAPNAVVYNTLLHALCKNGKVGRARSLMSE 242
Query: 193 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
MK +P+ T++ LI + K +L E + +P+ VT V+ G
Sbjct: 243 MK-----EPNDVTFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEG 297
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
+ + +VL +ES K DV NT++ + +G++ + ++++ + G P T+
Sbjct: 298 RVSEALEVLER-VESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETY 356
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG----DAKNMEYTFD 368
N+LI Y M D M+ W +T+N +I + G K +E D
Sbjct: 357 NLLIAGYCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQD 416
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK-FEIAENTTFYNAVLSACTKA 427
G + D + C+I GF + + + EK F A + +F ++S C K
Sbjct: 417 SDTVHGARIDP--YNCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSF--KLISLCEKG 472
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ +++ + +M P +I Y + G
Sbjct: 473 -GMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQHG 507
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 158/380 (41%), Gaps = 47/380 (12%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSN-------L 182
P Y L+ L K+G+ RAR L + M E P+ T+ L++AYC L
Sbjct: 215 PNAVVYNTLLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVL 270
Query: 183 LDEAFSI----------------LNEMKNHPLCQP-----------DVFTYSTLIKPCVD 215
L++ FS+ NE + + DV +TL+K
Sbjct: 271 LEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTLVKGYCA 330
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
K + + + +M + +PN T N++++GY G D + M ++ + + +
Sbjct: 331 LGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDTFNDM-KTDAIRWNFA 389
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT--FNILI-GAYGKKRMYDKMSTVM 332
T NT+I G+ D K E ++ R +N +I G Y + R D + ++
Sbjct: 390 TFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYGFYKENRWEDALEFLL 449
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
+ M KL FP +I + + G +++ +DQM EG CLI+ ++
Sbjct: 450 K-MEKL-FPRAVDRSFKLI-SLCEKGGMDDLKTAYDQMIGEGGVPSIIVSHCLIHRYSQH 506
Query: 393 GLFHKVISTVQ-LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
G + + + + + + ++TF NAV+ K + +M + + M + C PD +
Sbjct: 507 GKIEESLELINDMVTRGYLPRSSTF-NAVIIGFCKQDKVMNGIKFVEDMAERGCVPDTES 565
Query: 452 YTIMIEAYRKEGMNDKIYYL 471
Y ++E +G K + L
Sbjct: 566 YNPLLEELCVKGDIQKAWLL 585
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 75/163 (46%), Gaps = 8/163 (4%)
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT--DVGD 359
+ G+ P+ F +I +G+ R+ ++ +V++ + K + +N++++ D+
Sbjct: 105 SIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVKEDIDI 164
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
A+ E+ +M A G+ D T+ L+ G + +Q+ + +A N YN
Sbjct: 165 AR--EFFTRKMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNT 222
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+L A K + + MK+ P+D T+ I+I AY E
Sbjct: 223 LLHALCKNGKVGRARSLMSEMKE----PNDVTFNILISAYCNE 261
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 75/358 (20%), Positives = 127/358 (35%), Gaps = 57/358 (15%)
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTL---------------- 209
S TY AL C D + +L+EM + PD + T+
Sbjct: 75 SRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISV 134
Query: 210 --------IKPCVDAFKFDLVELLYED-----------MAARSIMPNTVTQNIVLSGYGK 250
IKP + F L L+ ED M A I + T I++ G
Sbjct: 135 VDLVSKFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSL 194
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
+ K+L M +++ P+ NT++ G++ + + EP
Sbjct: 195 TNRIGDGFKLLQIM-KTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMK----EPNDV 249
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
TFNILI AY ++ + ++E L F T V+E + G +++
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI-------AENTTFYNAVLSA 423
++G K D L+ G+ G +++A++F I N YN +++
Sbjct: 310 ESKGGKVDVVACNTLVKGYCALG-------KMRVAQRFFIEMERKGYLPNVETYNLLIAG 362
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND---KIYYLEQEKKTM 478
L F MK + + T+ +I G D KI + Q+ T+
Sbjct: 363 YCDVGMLDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTV 420
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 152/353 (43%), Gaps = 8/353 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
Q+L+ + L + P TY L+ K A +L +I +G +P+ +Y L
Sbjct: 194 QSLQFVERLMQKGL-APNAFTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVL 252
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAAR 232
L +C+ D+A ++ E+ + +V +Y+ L++ C D +++ L +M
Sbjct: 253 LTGFCKEGRTDDAMALFRELPAKGF-KANVVSYNILLRCLCCDG-RWEEANSLLAEMDGG 310
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLEST-SCKPDVWTMNTIISVFGNMGQID 291
P+ VT NI+++ G+ +Q +VL M + + + N +I+ G++D
Sbjct: 311 DRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVD 370
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
++ K ++ +P T+N + + +++ + Q T Y +VI
Sbjct: 371 LVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVI 430
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIA 411
+ G+ +M G D+ T+ LI G G+F + + + E+ E
Sbjct: 431 TSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENC 490
Query: 412 ENTT--FYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+ T F +L C + ME VF+ M + + P++TTY I++E E
Sbjct: 491 KPTVDNFNAMILGLCKIRRTDLAME-VFEMMVEKKRMPNETTYAILVEGIAHE 542
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/367 (21%), Positives = 146/367 (39%), Gaps = 5/367 (1%)
Query: 100 TEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMI 159
T+ L + + + +A+ V +++ P Y L+ L K G A QL M
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGII-PDASAYTYLVNQLCKRGNVGYAMQLVEKME 168
Query: 160 EEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKF 219
+ G + TY AL+ C L+++ + + L P+ FTYS L++
Sbjct: 169 DHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGL-APNAFTYSFLLEAAYKERGT 227
Query: 220 DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNT 279
D L +++ + PN V+ N++L+G+ K G+ D + L + K +V + N
Sbjct: 228 DEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE-LPAKGFKANVVSYNI 286
Query: 280 IISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK-- 337
++ G+ + + P T+NILI + ++ V++ M K
Sbjct: 287 LLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGN 346
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
QF T ++YN VI G + D+M K + T+ + + + +
Sbjct: 347 HQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQE 406
Query: 398 VISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
+Q + FY +V+++ + + ++ M PD TY+ +I
Sbjct: 407 AFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIR 466
Query: 458 AYRKEGM 464
EGM
Sbjct: 467 GLCLEGM 473
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 5/241 (2%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
N + L+ +Q LQ L+ +M K + + +Y +I L K G+ +
Sbjct: 320 NILINSLAFHGRTEQALQVLK--EMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLD 377
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNL-LDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
MI C P+ TY A + + C N + EAF I+ + N C F S + C
Sbjct: 378 EMIYRRCKPNEGTYNA-IGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRK 436
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
F +LLYE M P+ T + ++ G G F +VLS M ES +CKP V
Sbjct: 437 GNTFAAFQLLYE-MTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVD 495
Query: 276 TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
N +I + + D+ + +E P T+ IL+ + + V++ +
Sbjct: 496 NFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDEL 555
Query: 336 R 336
R
Sbjct: 556 R 556
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/301 (19%), Positives = 114/301 (37%), Gaps = 4/301 (1%)
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
+++ G P+ T LL C++N L +A ++ M + + PD Y+ L+
Sbjct: 96 SLVTGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGII-PDASAYTYLVNQLCKR 154
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
L E M NTVT N ++ G G +Q + + +++ P+ +T
Sbjct: 155 GNVGYAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQK-GLAPNAFT 213
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
+ ++ D K ++ G EP ++N+L+ + K+ D + +
Sbjct: 214 YSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELP 273
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
F +YN ++ G + +M T+ LIN A G
Sbjct: 274 AKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTE 333
Query: 397 KVISTVQLAEK--FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTI 454
+ + ++ K + T YN V++ K + + + M +C P++ TY
Sbjct: 334 QALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNA 393
Query: 455 M 455
+
Sbjct: 394 I 394
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 88/394 (22%), Positives = 158/394 (40%), Gaps = 42/394 (10%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
L+ALE F ++ + + + Y L K G+ A +L M + G P YT
Sbjct: 370 LEALEKFKEFRDMNIFLDRV-CYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTT 428
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ YC + +A +++EM + + PD+ TY+ L+ + V +YE M A
Sbjct: 429 LIDGYCLQGKVVDALDLIDEMIGNGM-SPDLITYNVLVSGLARNGHEEEVLEIYERMKAE 487
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM-------------------LESTSCKPD 273
PN VT ++++ G A K + E SS+ L + K
Sbjct: 488 GPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQKCPENKASFVKGYCEAGLSKKAYKAF 547
Query: 274 V-----WTMNTIISVFGNMGQIDMMEKWYE---KFRNFGIEPETRTFNILIGAYGKKRMY 325
V + I +F ++ +EK ++ K + +EP +IGA+ K
Sbjct: 548 VRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNV 607
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
+ + + M + TY +I + + + + E F+ M+ G+K D T+ L
Sbjct: 608 REAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVL 667
Query: 386 INGFANAGLFHKVISTVQ----------LAEKFE---IAENTTFYNAVLSACTKAEDLME 432
++ + H +VQ + +F I + Y ++ K +L +
Sbjct: 668 LDRYLKLDPEHHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQ 727
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+F RM D+ PD YT +I +Y ++G D
Sbjct: 728 AAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 89/189 (47%), Gaps = 19/189 (10%)
Query: 120 DMLKEHSFYEPKEGTYM--KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
D+LK+ S Y + G M K+I K A+ LF TM+E G P TYT ++ Y
Sbjct: 577 DVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTY 636
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI-----------KPCV---DAFKFDLVE 223
CR N L +A S+ +MK + +PDV TY+ L+ + C + K E
Sbjct: 637 CRLNELQKAESLFEDMKQRGI-KPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASE 695
Query: 224 LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISV 283
+L E +A I + V +++ K +Q ++ M++S +PD+ T+IS
Sbjct: 696 VLRE-FSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDS-GLEPDMVAYTTLISS 753
Query: 284 FGNMGQIDM 292
+ G IDM
Sbjct: 754 YFRKGYIDM 762
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 124/311 (39%), Gaps = 17/311 (5%)
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP- 212
LF + + G + TY ++ A CR L+EA +L E VF Y T I
Sbjct: 203 LFKQLKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIE-------NESVFGYKTFINGL 255
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTV--TQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
CV V L+ E + + + + + +V+ G+ K E V+ M E
Sbjct: 256 CVTGETEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEM-EEIGF 314
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
DV+ +I + + + +K G++ ++++ Y K M +
Sbjct: 315 GLDVYACLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALE 374
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ R + YN +A + +G + +M+ G+ D + LI+G+
Sbjct: 375 KFKEFRDMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYC 434
Query: 391 NAGLFHKVISTVQLAEKF---EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
G KV+ + L ++ ++ + YN ++S + E+ +++RMK P
Sbjct: 435 LQG---KVVDALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKP 491
Query: 448 DDTTYTIMIEA 458
+ T +++IE
Sbjct: 492 NAVTNSVIIEG 502
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/334 (19%), Positives = 140/334 (41%), Gaps = 35/334 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGK--SGQPHRARQLFTTMIEEGCDPSPETYT 171
+ LE+++ +K PK +++ G + + A F+++ E+ C PE
Sbjct: 476 EVLEIYERMKAEG---PKPNAVTNSVIIEGLCFARKVKEAEDFFSSL-EQKC---PENKA 528
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
+ + YC + L +A+ ++ +PL + V+ C++ + + + + M+A
Sbjct: 529 SFVKGYCEAGLSKKAYKAFVRLE-YPL-RKSVYI-KLFFSLCIEGY-LEKAHDVLKKMSA 584
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
+ P ++ + K + + + +M+E PD++T +I + + ++
Sbjct: 585 YRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVER-GLIPDLFTYTIMIHTYCRLNELQ 643
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGK----------------KRMYDKMSTVMEYM 335
E +E + GI+P+ T+ +L+ Y K KR K S V+
Sbjct: 644 KAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKR---KASEVLREF 700
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
Y +I+ + + + FD+M G++ D + LI+ + G
Sbjct: 701 SAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYI 760
Query: 396 HKVISTV-QLAEKFEIAENTTFYNAVLSACTKAE 428
++ V +L++K+ I + +F AV SA KA+
Sbjct: 761 DMAVTLVTELSKKYNIP-SESFEAAVKSAALKAK 793
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/356 (20%), Positives = 156/356 (43%), Gaps = 16/356 (4%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+SG+P +A LF MI+ GC P+ TYT+L+ + ++DEAF++L+++++ L PD+
Sbjct: 259 RSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGL-APDI 317
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
+ +I +F+ ++ + R ++P+ T +LS +GKFD + ++
Sbjct: 318 VLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKFDLVPRITHG 377
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYE--KFRNFGIEPETRTFNILIGAY-- 319
+ D+ T N + + F +G K +++F + + T+ + + A
Sbjct: 378 I----GTDFDLVTGNLLSNCFSKIGYNSYALKVLSIMSYKDFAL--DCYTYTVYLSALCR 431
Query: 320 -GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
G R KM ++ +K ++ +I++ ++G + F + E D
Sbjct: 432 GGAPRAAIKMYKIIIKEKK---HLDAHFHSAIIDSLIELGKYNTAVHLFKRCILEKYPLD 488
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
++ I G A + S ++ I N Y ++S K ++ ++ ++ +
Sbjct: 489 VVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILR 548
Query: 439 RMKDNQCPPD-DTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPEDEFF 493
D +T + + R G + + ++ K+ T+ + VS +DE F
Sbjct: 549 ECIQEGVELDPNTKFQVYSLLSRYRGDFSEFRSVFEKWKSEFTENVDVSDSDDELF 604
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/414 (20%), Positives = 161/414 (38%), Gaps = 48/414 (11%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
ALE+F+ ++ +F+ + G G + + MI EG P+ E + +L
Sbjct: 162 ALEIFEGIRFRNFFSFDIA--LSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQIL 219
Query: 175 AAYCRSNLLDEAFSILNEMKNHPL----------------------------------CQ 200
CR+ + EAF ++ M + C
Sbjct: 220 RLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCS 279
Query: 201 PDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKV 260
P++ TY++LIK VD D + + + + P+ V N+++ Y + G+F++ KV
Sbjct: 280 PNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKV 339
Query: 261 LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
+S LE PD +T +I+S G+ D++ + G + + T N+L +
Sbjct: 340 FTS-LEKRKLVPDQYTFASILSSLCLSGKFDLVPRITH---GIGTDFDLVTGNLLSNCFS 395
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
K V+ M F TY + A G + + + E D+
Sbjct: 396 KIGYNSYALKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAH 455
Query: 381 TFCCLINGFANAGLFHKVISTVQ--LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFK 438
+I+ G ++ + + + EK+ + + Y + +A+ + E +
Sbjct: 456 FHSAIIDSLIELGKYNTAVHLFKRCILEKYPL--DVVSYTVAIKGLVRAKRIEEAYSLCC 513
Query: 439 RMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPEDEF 492
MK+ P+ TY +I KE +K+ + +E I +G+++ P +F
Sbjct: 514 DMKEGGIYPNRRTYRTIISGLCKEKETEKVRKILRE---CIQEGVEL-DPNTKF 563
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 41/250 (16%)
Query: 108 EKKQWLQALEVFDMLKEHSFYE--PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDP 165
+K +W++ ++L+E + Y KEG ++I L G+ G A+++F M E C
Sbjct: 85 KKFEWVE-----EILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKR 139
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELL 225
+ ++ ALL A S D I E+ +PDV +Y+TLIK F L
Sbjct: 140 TALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVAL 199
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLE------------------- 266
+++ + + P+ +T NI+L GKF++ E++ + M+E
Sbjct: 200 IDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAM 259
Query: 267 ---------------STSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRT 311
KPDV+T +I F + G++D WY++ G P
Sbjct: 260 ENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFV 319
Query: 312 FNILIGAYGK 321
FN L+ A K
Sbjct: 320 FNSLLPAICK 329
Score = 72.4 bits (176), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 108/249 (43%)
Query: 219 FDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMN 278
F+ + ++++M R+ ++ N +L+ + KFD +E + + S +PDV + N
Sbjct: 122 FENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYN 181
Query: 279 TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
T+I G ++ N G++P+ TFNIL+ K +++ + M +
Sbjct: 182 TLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEK 241
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
+YN + ++ M FD+++ +K D TF +I GF + G +
Sbjct: 242 NVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEA 301
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
I+ + EK +N++L A KA DL + K + + D+ +++A
Sbjct: 302 ITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDA 361
Query: 459 YRKEGMNDK 467
K D+
Sbjct: 362 LVKGSKQDE 370
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 158/385 (41%), Gaps = 51/385 (13%)
Query: 115 ALEVF-DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
A+ +F DML +P+ TY + G+ GQ RQL +I+EG + +
Sbjct: 108 AISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFIRNTM 167
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
L Y L EA+ I M DV ++++I D + L+++M R
Sbjct: 168 LHMYVTCGCLIEAWRIFLGMIGF-----DVVAWNSMIMGFAKCGLIDQAQNLFDEMPQR- 221
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
N V+ N ++SG+ + G+F + M E KPD +TM ++++ +G +
Sbjct: 222 ---NGVSWNSMISGFVRNGRFKDALDMFREMQEK-DVKPDGFTMVSLLNACAYLGASEQG 277
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+E E + LI Y K ++ V E K Q S +N++I
Sbjct: 278 RWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQL----SCWNSMILG 333
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK---------------- 397
+ G + F ++ G++ DS +F ++ A++G H+
Sbjct: 334 LANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEP 393
Query: 398 ----------VISTVQLAEKFE-------IAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
V+ L E+ E + E+T ++++LSAC K ++ +R K +
Sbjct: 394 SIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCL 453
Query: 441 KDNQCPPDDTT-YTIMIEAYRKEGM 464
K + PD+T Y ++ AY G+
Sbjct: 454 K--KLDPDETCGYVLLSNAYASYGL 476
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 146/367 (39%), Gaps = 49/367 (13%)
Query: 116 LEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG----CDPSPETYT 171
++VFD LK+ EP G Y +++ K G+ H+ +LF + S YT
Sbjct: 193 IQVFDRLKQSVGVEPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYT 252
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
+ ++ +S EA +L EMK+ + + YS LI+ +A + + E L+++
Sbjct: 253 IVCSSLAKSGRAFEALEVLEEMKDKGIPESSEL-YSMLIRAFAEAREVVITEKLFKEAGG 311
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM----LESTSCKPDVWTMNTIISVFGNM 287
+ ++ + V+ Y + G + +V+++M L+ T C + I++ F
Sbjct: 312 KKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDC-----ILCAIVNGFSKQ 366
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
K YE E T+ I I AY + Y+K + + M K F Y
Sbjct: 367 RGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAY 426
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEK 407
+N+++ + + +M+ G K
Sbjct: 427 SNIMDMYGKTRRLSDAVRLMAKMKQRGCKP------------------------------ 456
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
N YN+++ +A DL E+++K MK + PD +YT MI AY + ++
Sbjct: 457 -----NIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELER 511
Query: 468 IYYLEQE 474
L QE
Sbjct: 512 CVELYQE 518
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 98/217 (45%), Gaps = 4/217 (1%)
Query: 199 CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQME 258
C+ TY+ I K++ E+L+++M + V + ++ YGK +
Sbjct: 384 CEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYSNIMDMYGKTRRLSDAV 443
Query: 259 KVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA 318
++++ M + CKP++W N++I + G + EK +++ + + P+ ++ +I A
Sbjct: 444 RLMAKM-KQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRAKVLPDKVSYTSMISA 502
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
Y + + ++ + + R + + ++ F+ + M+ EG + D
Sbjct: 503 YNRSKELERCVELYQEFRMNRGKIDRAMAGIMVGVFSKTSRIDELMRLLQDMKVEGTRLD 562
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTT 415
++ + +N +AGL ++ L E F+ A+ +T
Sbjct: 563 ARLYSSALNALRDAGLNSQI---RWLQESFDAAQTST 596
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/314 (18%), Positives = 125/314 (39%), Gaps = 9/314 (2%)
Query: 152 RQLFTTMIEEGCDPSPETYTALLAAY-CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
R+L + E+ + S T L +Y S D S+ +++ H PD T S LI
Sbjct: 88 RKLSSEFYEKAKENSELRTTKHLISYLVSSKSWDLLVSVCEDLREHK-ALPDGQTCSNLI 146
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ C+ KF + L + + + + + + G+ K + +V + +S
Sbjct: 147 RSCIRDRKFRITHCLLSVFRSDKSLAVSAS-DAAMKGFNKLQMYSSTIQVFDRLKQSVGV 205
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFR----NFGIEPETRTFNILIGAYGKK-RMY 325
+P I+ +G+ + + +++F+ +F + + I+ + K R +
Sbjct: 206 EPSPGCYCRIMEAHEKIGENHKVVELFQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAF 265
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
+ + V+E M+ P ++ Y+ +I AF + + E F + + + D + +
Sbjct: 266 EALE-VLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKEAGGKKLLKDPEMCLKV 324
Query: 386 INGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
+ + G + V K E+ A+++ +K E +V++ +C
Sbjct: 325 VLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQRGFAEAVKVYEWAMKEEC 384
Query: 446 PPDDTTYTIMIEAY 459
TY I I AY
Sbjct: 385 EAGQVTYAIAINAY 398
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/347 (22%), Positives = 136/347 (39%), Gaps = 42/347 (12%)
Query: 142 LGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP 201
LGK G+ A +LF M +G P YT L+ C +AF ++ EM P
Sbjct: 406 LGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGK-TP 464
Query: 202 DVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKV 260
D+ Y+ L + + E L + M R + P VT N+V+ G AG+ D+ E
Sbjct: 465 DIVIYNVLAGGLATNGLAQEAFETL-KMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAF 523
Query: 261 LSSM------------------------------LESTSCKPDVWTMNTIISVFGNMGQI 290
S+ LE K +T+ T S+ I
Sbjct: 524 YESLEHKSRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFT--SLCAEKDYI 581
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ ++ G+EPE + LIGA+ + K E + + TY +
Sbjct: 582 SKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIM 641
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
I + + + K F+ M+ +K D T+ L+N + ++ E F++
Sbjct: 642 INTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDPELDMKREM-------EAFDV 694
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
+ +Y +++ DL ++ +FK MK + PD TYT++++
Sbjct: 695 IPDVVYYTIMINRYCHLNDLKKVYALFKDMKRREIVPDVVTYTVLLK 741
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 132/330 (40%), Gaps = 72/330 (21%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP++ Y KLI + +AR+ F ++ + P TYT ++ YCR N +A++
Sbjct: 597 EPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYA 656
Query: 189 ILNEMKNHPLCQPDVFTYSTLIK--PCVDAFK----FDL--------------------- 221
+ +MK + +PDV TYS L+ P +D + FD+
Sbjct: 657 LFEDMKRRDV-KPDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLK 715
Query: 222 -VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 280
V L++DM R I+P+ VT ++L ++ E+ LS +++ KPDV+ +
Sbjct: 716 KVYALFKDMKRREIVPDVVTYTVLLK--------NKPERNLSREMKAFDVKPDVFYYTVL 767
Query: 281 ISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF 340
I +G + ++ +++ G++P+ + LI K
Sbjct: 768 IDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCK------------------- 808
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
+G K + FD+M G+K D + LI G G K +
Sbjct: 809 ----------------MGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVK 852
Query: 401 TVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
V+ + I +AV A KA+ L
Sbjct: 853 LVKEMLEKGIKPTKASLSAVHYAKLKAKGL 882
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/369 (21%), Positives = 140/369 (37%), Gaps = 60/369 (16%)
Query: 119 FDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYC 178
F+ F PK + L + +A+ L M + G +P Y L+ A+C
Sbjct: 552 FERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWC 611
Query: 179 RSNLLDEA---FSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
R N + +A F IL K PD+FTY+ +I + L+EDM R +
Sbjct: 612 RVNNVRKAREFFEILVTKK----IVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVK 667
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
P+ VT +++L+ E + +E+ PDV +I+ + ++ + +
Sbjct: 668 PDVVTYSVLLNS--------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
++ + I P+ T+ +L+ ++ + +M + Y +I+
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERNLSREM-------KAFDVKPDVFYYTVLIDWQC 772
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTT 415
+GD + FDQM G+ D+
Sbjct: 773 KIGDLGEAKRIFDQMIESGVDPDAAP---------------------------------- 798
Query: 416 FYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEK 475
Y A+++ C K L E + +F RM ++ PD YT +I + G K L +E
Sbjct: 799 -YTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKE- 856
Query: 476 KTMITDGIK 484
M+ GIK
Sbjct: 857 --MLEKGIK 863
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 152/407 (37%), Gaps = 78/407 (19%)
Query: 141 LLGKSGQPHRARQLFTTMIE-EGCDPSPET--YTALLAAYCRSNLLDEAFSILNEMKNHP 197
L+G + F MIE +G +P+ Y L + L EAF L M+N
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRG 496
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ- 256
+ +P T++ +I+ +DA + D E YE + +S N + ++ G+ AG D
Sbjct: 497 V-KPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKS-RENDAS---MVKGFCAAGCLDHA 551
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
E+ + LE K +T+ T S+ I + ++ G+EPE + LI
Sbjct: 552 FERFIR--LEFPLPKSVYFTLFT--SLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLI 607
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
GA+ + K E + + TY +I + + + K F+ M+ +K
Sbjct: 608 GAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVK 667
Query: 377 ADSKTFCCL----------------------------INGFANAGLFHKVIS-------- 400
D T+ L IN + + KV +
Sbjct: 668 PDVVTYSVLLNSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALFKDMKRR 727
Query: 401 ---------TVQLAEK-----------FEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
TV L K F++ + +Y ++ K DL E +R+F +M
Sbjct: 728 EIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGEAKRIFDQM 787
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEK---KTMITDGIK 484
++ PD YT +I K G YL++ K MI G+K
Sbjct: 788 IESGVDPDAAPYTALIACCCKMG------YLKEAKMIFDRMIESGVK 828
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/372 (18%), Positives = 136/372 (36%), Gaps = 31/372 (8%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y K++ L + A + M + G DP Y+A++ + ++ + +A + N+M
Sbjct: 293 AYRKVVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM 352
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ + S++++ F L+++ +I + V N+ GK GK
Sbjct: 353 LKKRK-RINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGK 411
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ ++ M PDV T+I G+ + G P+ +N
Sbjct: 412 VEEAIELFREM-TGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYN 470
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
+L G + + ++ M T T+N VIE D G+ E ++ + +
Sbjct: 471 VLAGGLATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHK 530
Query: 374 GMKADS---KTFC---CLINGF-----------------------ANAGLFHKVISTVQL 404
+ D+ K FC CL + F A K +
Sbjct: 531 SRENDASMVKGFCAAGCLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDR 590
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
K + + Y ++ A + ++ + F+ + + PD TYTIMI Y +
Sbjct: 591 MWKLGVEPEKSMYGKLIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNE 650
Query: 465 NDKIYYLEQEKK 476
+ Y L ++ K
Sbjct: 651 PKQAYALFEDMK 662
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/340 (20%), Positives = 132/340 (38%), Gaps = 19/340 (5%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTM--IEEGCDPSPETYTALLAAYCRSNLLDEA 186
+ K T++ +V G G+ L + +E+ TAL+ AY ++ DEA
Sbjct: 106 DKKLDTFLFELVRRGDEGRGFSVMDLLKAIGEMEQSLVLLIRVSTALVKAYANLDMFDEA 165
Query: 187 FSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLS 246
I PD+ + LI + + + D+V + ++ + + T +V+
Sbjct: 166 IDIFFRAYYSLGRAPDIKALNFLISRMIASGRSDMVVGFFWEIERLGLDADAHTYVLVVQ 225
Query: 247 GYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
+ +++EK+LS +L S + P V+ +N I + N D+ + R+ I
Sbjct: 226 ALWRNDDKEELEKLLSRLLISETRNPCVFYLNFIEGLCLNQ-MTDIAYFLLQPLRDANIL 284
Query: 307 PETRTFNI-----LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+ I + G + R+ D S V++ M K Y+ +IE G K
Sbjct: 285 VDKSDLGIAYRKVVRGLCYEMRIEDAESVVLD-MEKHGIDPDVYVYSAIIE-----GHRK 338
Query: 362 NMEY-----TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTF 416
NM F++M + + + ++ + G F + + + I+ +
Sbjct: 339 NMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVC 398
Query: 417 YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
YN A K + E +F+ M PD YT +I
Sbjct: 399 YNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLI 438
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A +FD + E S +P Y LI K G A+ +F MIE G P YTAL
Sbjct: 779 EAKRIFDQMIE-SGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTAL 837
Query: 174 LAAYCRSNLLDEAFSILNEM 193
+A CR+ + +A ++ EM
Sbjct: 838 IAGCCRNGFVLKAVKLVKEM 857
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/336 (21%), Positives = 135/336 (40%), Gaps = 42/336 (12%)
Query: 145 SGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP--LCQPD 202
SG+P ++F P YT L+ Y ++ + + +L M+ PD
Sbjct: 400 SGEPPLLPKVFA--------PDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPD 451
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
TY+T++ V+A D + +MA + N +T N++L GY K + D+ E +L
Sbjct: 452 EVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLR 511
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG-- 320
M E +PDV + N II + ++ + R GI P ++ L+ A+
Sbjct: 512 EMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMS 571
Query: 321 -----KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM 375
R++D+M M + +N ++E + +G ++ + +M+ G
Sbjct: 572 GQPKLANRVFDEM------MNDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGF 625
Query: 376 KADSKTFCCLINGFA------NAGLFHKVISTVQLAEKFEIAENTT-------------F 416
+ T+ L NG + +A L K I +K E +++
Sbjct: 626 YPNVATYGSLANGVSQARKPGDALLLWKEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGL 685
Query: 417 YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
+ + C +A + + M++N PP+ T Y
Sbjct: 686 LDTLADICVRAAFFKKALEIIACMEENGIPPNKTKY 721
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 88/213 (41%), Gaps = 4/213 (1%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
+ L+A+ D H P E TY ++ +G RARQ+ M G + TY
Sbjct: 435 RMLEAMRRQDDRNSH----PDEVTYTTVVSAFVNAGLMDRARQVLAEMARMGVPANRITY 490
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
LL YC+ +D A +L EM +PDV +Y+ +I C+ + +M
Sbjct: 491 NVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILIDDSAGALAFFNEMR 550
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
R I P ++ ++ + +G+ +V M+ K D+ N ++ + +G I
Sbjct: 551 TRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIAWNMLVEGYCRLGLI 610
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
+ ++ + + G P T+ L + R
Sbjct: 611 EDAQRVVSRMKENGFYPNVATYGSLANGVSQAR 643
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/403 (19%), Positives = 161/403 (39%), Gaps = 45/403 (11%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+ AL+ F + T+MK+I +LG+ + + AR + M E+G +
Sbjct: 128 KKLEHALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEKGVPWDEDM 187
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPL------------------------------- 198
+ L+ +Y ++ ++ E+ I +MK+ +
Sbjct: 188 FVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMV 247
Query: 199 ---CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFD 255
+P TY+ ++ + + + +EDM R I P+ T N +++G+ + K D
Sbjct: 248 SEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMD 307
Query: 256 QMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL 315
+ EK+ M + P V + T+I + + ++D + +E+ R+ GIEP T++ L
Sbjct: 308 EAEKLFVEM-KGNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTL 366
Query: 316 I-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
+ G +M + + + M K P S + ++ + + GD M
Sbjct: 367 LPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLN 426
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQ-LAEKFEIAENT-------TFYNAVLSACTK 426
+ A++ + LI A +++ I + L EK I + + YN ++
Sbjct: 427 VPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCN 486
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
+ E +F+++ D +I + KEG D Y
Sbjct: 487 NGQTAKAEVLFRQLMKRGVQDQDALNN-LIRGHAKEGNPDSSY 528
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/343 (21%), Positives = 140/343 (40%), Gaps = 10/343 (2%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
EP TY ++ S + A + F M G P T+ ++ +CR +DEA
Sbjct: 252 EPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEK 311
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EMK + + P V +Y+T+IK + + D ++E+M + I PN T + +L G
Sbjct: 312 LFVEMKGNKIG-PSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGL 370
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
AGK + + +L +M+ D ++ G + + + + E
Sbjct: 371 CDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEVLKAMATLNVPAE 430
Query: 309 TRTFNILIGAYGKKRMYDK----MSTVMEYMRKLQFPWTT----STYNNVIEAFTDVGDA 360
+ +LI K Y++ + T++E L+ T S YN +IE + G
Sbjct: 431 AGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYNPIIEYLCNNGQT 490
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
E F Q+ G++ D LI G A G +++ + + + Y +
Sbjct: 491 AKAEVLFRQLMKRGVQ-DQDALNNLIRGHAKEGNPDSSYEILKIMSRRGVPRESNAYELL 549
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ + + + + M ++ PD + + +IE+ ++G
Sbjct: 550 IKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESLFEDG 592
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 149/331 (45%), Gaps = 30/331 (9%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
L+ + K + AR++F ++ DP+ +T L + Y ++ L +EA + M++
Sbjct: 201 LVDMYAKCDRISDARRVFEWIV----DPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+PD + T+I + K LL+ +M++ P+ V N+++SG+GK G
Sbjct: 257 H-RPDHLAFVTVINTYIRLGKLKDARLLFGEMSS----PDVVAWNVMISGHGKRGCETVA 311
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+ +M +S S K T+ +++S G + +D+ + + G+ + L+
Sbjct: 312 IEYFFNMRKS-SVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVS 370
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
Y K + + V E + + + +N +I + G++ + F M++ G
Sbjct: 371 MYSKCEKMEAAAKVFEALEEKNDVF----WNAMIRGYAHNGESHKVMELFMDMKSSGYNI 426
Query: 378 DSKTFCCLINGFANA------GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
D TF L++ A + FH +I K ++A+N NA++ K L
Sbjct: 427 DDFTFTSLLSTCAASHDLEMGSQFHSIII------KKKLAKNLFVGNALVDMYAKCGALE 480
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
+ ++F+RM C D+ T+ +I +Y ++
Sbjct: 481 DARQIFERM----CDRDNVTWNTIIGSYVQD 507
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 14/304 (4%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LI + K G AR++F+++ E S + AL+A Y ++NL +EA + EM
Sbjct: 570 LIDMYSKCGIIKDARKVFSSLPE----WSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG 624
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ P T++T+++ C L + + R I L G + M
Sbjct: 625 V-NPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR--GM 681
Query: 258 EKVLSSMLESTSCKPDV-WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
+ + E +S K V WT ++S G + K+Y++ R+ G+ P+ TF ++
Sbjct: 682 TEACALFSELSSPKSIVLWT--GMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVL 739
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
+ + + L T N +I+ + GD K FD+MR +
Sbjct: 740 RVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRR---R 796
Query: 377 ADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERV 436
++ ++ LING+A G + + I + + VL+AC+ A + + ++
Sbjct: 797 SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKI 856
Query: 437 FKRM 440
F+ M
Sbjct: 857 FEMM 860
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 166/367 (45%), Gaps = 62/367 (16%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A ++FDM+ E+ ++ +I K AR+ F M E+ S ++ A+
Sbjct: 185 EACKLFDMMPENDVV-----SWTVMITGFAKVKDLENARKYFDRMPEK----SVVSWNAM 235
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD------LVELLYE 227
L+ Y ++ ++A + N+M + +P+ T+ +I C +F+ D LV+L+ E
Sbjct: 236 LSGYAQNGFTEDALRLFNDMLRLGV-RPNETTWVIVISAC--SFRADPSLTRSLVKLIDE 292
Query: 228 --------------DM--------AARSIM------PNTVTQNIVLSGYGKAGKFDQMEK 259
DM +AR I N VT N ++SGY + G +
Sbjct: 293 KRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQ 352
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFG-IEPETRTFNILIGA 318
+ +M K +V + N++I+ + + GQ + +++E ++G +P+ T ++ A
Sbjct: 353 LFDTM-----PKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSA 407
Query: 319 YGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKAD 378
G + +++Y+RK Q S Y ++I + G+ + FD+M+ + D
Sbjct: 408 CGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMK----ERD 463
Query: 379 SKTFCCLINGFANAGLFHKVISTVQLAEKFE---IAENTTFYNAVLSACTKAEDLMEMER 435
++ L FA G + T+ L K + I + Y +VL+AC +A L E +R
Sbjct: 464 VVSYNTLFTAFAANG---DGVETLNLLSKMKDEGIEPDRVTYTSVLTACNRAGLLKEGQR 520
Query: 436 VFKRMKD 442
+FK +++
Sbjct: 521 IFKSIRN 527
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/359 (20%), Positives = 135/359 (37%), Gaps = 1/359 (0%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
+L F+ + + Y P Y +L L + ++ M + D S ET ++
Sbjct: 94 SLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFII 153
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
Y ++ +D+A + N + CQ V Y++L+ D F L M + +
Sbjct: 154 EQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGL 213
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ T I+++G+ AGK + ++ L M P + +I N G ++ +
Sbjct: 214 KPDKRTYAILVNGWCSAGKMKEAQEFLDEM-SRRGFNPPARGRDLLIEGLLNAGYLESAK 272
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ K G P+ +TFNILI A K + + KL TY +I A
Sbjct: 273 EMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAV 332
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
+ +G + +G K + +I G G+F S + N
Sbjct: 333 SKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNR 392
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
Y +++ C + ++ M + P + ++ + + G +D +EQ
Sbjct: 393 PVYTMLITMCGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/300 (19%), Positives = 122/300 (40%), Gaps = 8/300 (2%)
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
+L A RS+ +++ N +++P P Y L K K++ + + + M
Sbjct: 83 VLRATSRSS--NDSLRFFNWARSNPSYTPTSMEYEELAKSLASHKKYESMWKILKQMKDL 140
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
S+ + T ++ YGK G DQ ++ + + ++ C+ V N+++ + + M
Sbjct: 141 SLDISGETLCFIIEQYGKNGHVDQAVELFNGVPKTLGCQQTVDVYNSLLHALCD---VKM 197
Query: 293 MEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
Y R G++P+ RT+ IL+ + + ++ M + F +
Sbjct: 198 FHGAYALIRRMIRKGLKPDKRTYAILVNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDL 257
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+IE + G ++ + +M G D +TF LI + +G I A K
Sbjct: 258 LIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLG 317
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
+ + Y ++ A +K + E R+ ++ P + Y +I+ + GM D +
Sbjct: 318 LCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAF 377
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 108/280 (38%), Gaps = 2/280 (0%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
QA+E+F+ + + + Y L+ L H A L MI +G P TY L
Sbjct: 164 QAVELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ +C + + EA L+EM P LI+ ++A + + + M
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGF-NPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGG 282
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+P+ T NI++ K+G+ + ++ + + C D+ T T+I +G+ID
Sbjct: 283 FVPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLC-VDIDTYKTLIPAVSKIGKIDEA 341
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ G +P + +I + M+D + M+ P Y +I
Sbjct: 342 FRLLNNCVEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITM 401
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
G + +M G+ S+ F + +G N G
Sbjct: 402 CGRGGKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGG 441
>AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:13116547-13118059 FORWARD
LENGTH=452
Length = 452
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 149/358 (41%), Gaps = 21/358 (5%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y K I + G++ + A LF ++ + Y +L++ Y + L +E S+ + +
Sbjct: 107 YAKGIKIAGRARDINLAVYLFDEAAKKRMQ-TASVYNSLMSVYMWNGLAEECQSLFKDFR 165
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
C P V TY+ L+ +E +E++ + PN+VT N +++GY A +
Sbjct: 166 RQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGYMTAWNW 225
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN-FGIE--PETRT 311
D+ME M + +PD T ++ + N G ++ ME+ YE ++ G+ P R
Sbjct: 226 DKMEATFQEM-KRGPVEPDTDTYQLMLRGYANSGNLNRMEEMYEVIKDQVGVNSGPLVRA 284
Query: 312 FNILIGAYGKKRMYDKMSTVMEYMRKLQ----FPWTTSTYNNVI--EAFTDVGDAKNMEY 365
+I AY KK + D++ + + L PW + E F + ++K E
Sbjct: 285 ---MICAYCKKAVEDRVQKIENLLSLLSGEEYLPWLNVLLIRLYAQEDFVEAMESKINE- 340
Query: 366 TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
F+Q S +I + + + V+ AE + Y+ +
Sbjct: 341 AFEQKTCVN---KSSIMRAIIAAYFRCNEVDNLANFVKRAESAGWKLCRSLYHCKIMMYG 397
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGI 483
+ EME V M + T+ IMI+AY+ GM E+ K M+ G+
Sbjct: 398 SQKRFEEMEGVVNEMAETNYGLVTKTFAIMIKAYKNHGMESDA---EKVKGKMLKRGL 452
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 113/280 (40%), Gaps = 6/280 (2%)
Query: 118 VFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
+F + + P TY L+ + G+ F + + P+ TY L+A Y
Sbjct: 160 LFKDFRRQTHCAPTVVTYNILVSVYGRLLMVKNMEAAFEELQKVKLPPNSVTYNFLIAGY 219
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN 237
+ D+ + EMK P+ +PD TY +++ ++ + +E +YE + + + +
Sbjct: 220 MTAWNWDKMEATFQEMKRGPV-EPDTDTYQLMLRGYANSGNLNRMEEMYEVIKDQVGVNS 278
Query: 238 TVTQNIVLSGYGKAGKFDQMEKV--LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME- 294
++ Y K D+++K+ L S+L P W +I ++ ++ ME
Sbjct: 279 GPLVRAMICAYCKKAVEDRVQKIENLLSLLSGEEYLP--WLNVLLIRLYAQEDFVEAMES 336
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
K E F ++ +I AY + D ++ ++ + S Y+ I +
Sbjct: 337 KINEAFEQKTCVNKSSIMRAIIAAYFRCNEVDNLANFVKRAESAGWKLCRSLYHCKIMMY 396
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+ ME ++M +KTF +I + N G+
Sbjct: 397 GSQKRFEEMEGVVNEMAETNYGLVTKTFAIMIKAYKNHGM 436
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 84/179 (46%), Gaps = 3/179 (1%)
Query: 117 EVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
+FD + F P TY L+ +LGK +P A M E G DPS YT L+
Sbjct: 275 RLFDEMARDGF-SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDG 333
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP 236
R+ L+ L+EM C+PDV Y+ +I V + + D + ++ +M + +P
Sbjct: 334 LSRAGNLEACKYFLDEMVKAG-CRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP 392
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
N T N ++ G AG+F + +L M ES C P+ +T++S G++ K
Sbjct: 393 NVFTYNSMIRGLCMAGEFREACWLLKEM-ESRGCNPNFVVYSTLVSYLRKAGKLSEARK 450
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 15/235 (6%)
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
P + N +L+ ++ +E V MLE PDV T N ++ +G++D ++
Sbjct: 217 PFKHSYNAILNSLLGVKQYKLIEWVYKQMLED-GFSPDVLTYNILLWTNYRLGKMDRFDR 275
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
+++ G P++ T+NIL+ GK T + +M+++ + Y +I+ +
Sbjct: 276 LFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLS 335
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG-------LFHKVISTVQLAEKF 408
G+ + +Y D+M G + D + +I G+ +G +F ++ QL F
Sbjct: 336 RAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVF 395
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
YN+++ A + E + K M+ C P+ Y+ ++ RK G
Sbjct: 396 T-------YNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
L AL + +KE +P Y LI L ++G + M++ GC P YT
Sbjct: 306 LAALTTLNHMKEVGI-DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
++ Y S LD+A + EM P+VFTY+++I+ A +F L ++M +R
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQL-PNVFTYNSMIRGLCMAGEFREACWLLKEMESR 423
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLE 266
PN V + ++S KAGK + KV+ M++
Sbjct: 424 GCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVK 457
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 105/272 (38%), Gaps = 26/272 (9%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA-----------YCRSNL 182
T+ LI G++G +A F P +Y A+L + + +
Sbjct: 186 TFNLLICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM 245
Query: 183 LDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQN 242
L++ FS PDV TY+ L+ K D + L+++MA P++ T N
Sbjct: 246 LEDGFS------------PDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYN 293
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
I+L GK K L+ M E P V T+I G ++ + + ++
Sbjct: 294 ILLHILGKGNKPLAALTTLNHMKE-VGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVK 352
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR-KLQFPWTTSTYNNVIEAFTDVGDAK 361
G P+ + ++I Y DK + M K Q P TYN++I G+ +
Sbjct: 353 AGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLP-NVFTYNSMIRGLCMAGEFR 411
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+ +M + G + + L++ AG
Sbjct: 412 EACWLLKEMESRGCNPNFVVYSTLVSYLRKAG 443
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/228 (19%), Positives = 93/228 (40%), Gaps = 1/228 (0%)
Query: 240 TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK 299
+ ++++ + + G++ M +++ M++ T N +I G G + K
Sbjct: 151 SYHLLMKIFAECGEYKAMWRLVDEMVQD-GFPTTARTFNLLICSCGEAGLAKQAVVQFMK 209
Query: 300 FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
+ F P ++N ++ + + Y + V + M + F TYN ++ +G
Sbjct: 210 SKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTNYRLGK 269
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
+ FD+M +G DS T+ L++ ++T+ ++ I + Y
Sbjct: 270 MDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTT 329
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
++ ++A +L + M C PD YT+MI Y G DK
Sbjct: 330 LIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDK 377
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 3/143 (2%)
Query: 340 FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVI 399
F T ++Y+ +++ F + G+ K M D+M +G ++TF LI AGL + +
Sbjct: 145 FRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEAGLAKQAV 204
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
++ F YNA+L++ + +E V+K+M ++ PD TY I++
Sbjct: 205 VQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 460 RKEGMNDKIYYLEQEKKTMITDG 482
+ G D+ L E M DG
Sbjct: 265 YRLGKMDRFDRLFDE---MARDG 284
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 84/200 (42%), Gaps = 3/200 (1%)
Query: 118 VFDMLKEHSF-YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
V +K +F Y P + +Y ++ L Q ++ M+E+G P TY LL
Sbjct: 204 VVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWT 263
Query: 177 YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP 236
R +D + +EM PD +TY+ L+ K M I P
Sbjct: 264 NYRLGKMDRFDRLFDEMARDGF-SPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDP 322
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKW 296
+ + ++ G +AG + + L M+++ C+PDV +I+ + G++D ++
Sbjct: 323 SVLHYTTLIDGLSRAGNLEACKYFLDEMVKA-GCRPDVVCYTVMITGYVVSGELDKAKEM 381
Query: 297 YEKFRNFGIEPETRTFNILI 316
+ + G P T+N +I
Sbjct: 382 FREMTVKGQLPNVFTYNSMI 401
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 163/438 (37%), Gaps = 79/438 (18%)
Query: 120 DMLKEHSFY--EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
D+ + SF +P Y +I L KS A F M +GC P TY L+
Sbjct: 166 DVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGV 225
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN 237
C+ ++DEA ++ +M+ +P+VFTY+ LI + A + D E M R + PN
Sbjct: 226 CKKGVVDEAIRLVKQMEQEG-NRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPN 284
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS------------CK-------------- 271
T + G + + +VL +E S C
Sbjct: 285 EATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLR 344
Query: 272 --------PDVWTMNTIISVFGNMGQIDMME--KWYEKFRNFGIEPETRTFNILIGAYGK 321
PD T N +S + D++E + ++ F + G++P + +L+ A
Sbjct: 345 KIGERGYIPDSSTFNAAMSCL--LKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLN 402
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE----------------------------- 352
+ + + ++ M + +YN VI+
Sbjct: 403 AQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVT 462
Query: 353 ------AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
++ GD K + +++ G K D TF +IN A +
Sbjct: 463 FNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEML 522
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
++ I N YN ++ +C D ++F +MK+N PD Y I+++ K
Sbjct: 523 EWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKM---R 579
Query: 467 KIYYLEQEKKTMITDGIK 484
K+ E+ KTM+ G+K
Sbjct: 580 KVKKAEELLKTMLRIGLK 597
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 128/339 (37%), Gaps = 38/339 (11%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y P T+ + L K ++F + G P Y L+ A + E
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
L +M L V++Y+ +I A + + + +M R I PN VT N LSG
Sbjct: 411 RYLKQMGVDGLLS-SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSG 469
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
Y G ++ VL +L KPDV T + II+ +I +++ +GIEP
Sbjct: 470 YSVRGDVKKVHGVLEKLLVH-GFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEP 528
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+NILI + D+ + M++ YN I++F + K E
Sbjct: 529 NEITYNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELL 588
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
M G+K D+ T+ LI + +G +
Sbjct: 589 KTMLRIGLKPDNFTYSTLIKALSESG--------------------------------RE 616
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEA-YRKEGMN 465
+ EM F ++ + C PD T ++ E RK G++
Sbjct: 617 SEAREM---FSSIERHGCVPDSYTKRLVEELDLRKSGLS 652
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 140/370 (37%), Gaps = 40/370 (10%)
Query: 120 DMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
++LKE S Y + LI G+ G +F + G PS Y A++ A
Sbjct: 131 ELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDAL 190
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN 237
+SN LD A+ +M++ C+PD FTY+ LI D L + M PN
Sbjct: 191 VKSNSLDLAYLKFQQMRSDG-CKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPN 249
Query: 238 TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWY 297
T I++ G+ AG+ D+ K L M+ P+ T+ T + +
Sbjct: 250 VFTYTILIDGFLIAGRVDEALKQL-EMMRVRKLNPNEATIRTFV---------------H 293
Query: 298 EKFRNFGIEPETRTFNILIGAYGK-----KRMYDKMSTVM----------EYMRKL---Q 339
FR P + F +L+G K + YD + + +++RK+
Sbjct: 294 GIFRCL---PPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERG 350
Query: 340 FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVI 399
+ +ST+N + D FD + G+K + L+ NA F +
Sbjct: 351 YIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGD 410
Query: 400 STVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
++ + + YNAV+ KA + M+D P+ T+ + Y
Sbjct: 411 RYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGY 470
Query: 460 RKEGMNDKIY 469
G K++
Sbjct: 471 SVRGDVKKVH 480
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/354 (19%), Positives = 146/354 (41%), Gaps = 11/354 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+AL+ +M++ P E T + + + P +A ++ +E+ + Y A+
Sbjct: 268 EALKQLEMMRVRKL-NPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAV 326
Query: 174 LAAYCRSN--LLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL--LYEDM 229
L YC SN + E L ++ PD T++ + + DLVE +++
Sbjct: 327 L--YCLSNNSMAKETGQFLRKIGERGYI-PDSSTFNAAMSCLLKGH--DLVETCRIFDGF 381
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
+R + P +++ A +F + ++ L M V++ N +I +
Sbjct: 382 VSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQM-GVDGLLSSVYSYNAVIDCLCKARR 440
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
I+ + + ++ GI P TFN + Y + K+ V+E + F T++
Sbjct: 441 IENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSL 500
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+I + K+ F +M G++ + T+ LI + G + + ++
Sbjct: 501 IINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKENG 560
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
++ + YNA + + K + + E + K M PD+ TY+ +I+A + G
Sbjct: 561 LSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESG 614
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
++R G + + C LI + GL + +T YNAV+ A K+
Sbjct: 135 EIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSN 194
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK----IYYLEQEKK-------T 477
L F++M+ + C PD TY I+I K+G+ D+ + +EQE T
Sbjct: 195 SLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYT 254
Query: 478 MITDGIKVSQPEDE 491
++ DG ++ DE
Sbjct: 255 ILIDGFLIAGRVDE 268
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%), Gaps = 4/184 (2%)
Query: 279 TIISVFGNM----GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEY 334
++ SV GN G + + + ++ R+ G +LIG++G+ + + V
Sbjct: 111 SLKSVLGNALFRKGPLLLSMELLKEIRDSGYRISDELMCVLIGSWGRLGLAKYCNDVFAQ 170
Query: 335 MRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+ L +T YN VI+A F QMR++G K D T+ LI+G G+
Sbjct: 171 ISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGV 230
Query: 395 FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTI 454
+ I V+ E+ N Y ++ A + E + + M+ + P++ T
Sbjct: 231 VDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRT 290
Query: 455 MIEA 458
+
Sbjct: 291 FVHG 294
>AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:11238421-11240125 FORWARD
LENGTH=540
Length = 540
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 157/355 (44%), Gaps = 20/355 (5%)
Query: 115 ALEVFDMLKEHSFYEPKEGT------YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE 168
AL +F L+ EPK + Y I L G+ + +++ M +G +
Sbjct: 195 ALRMFRELER----EPKRRSCFDVVLYNTAISLCGRINNVYETERIWRVMKGDGHIGTEI 250
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
TY+ L++ + R + A + +EM N+ + + Y+ +I C K+DL +++
Sbjct: 251 TYSLLVSIFVRCGRSELALDVYDEMVNNKISLREDAMYA-MISACTKEEKWDLALKIFQS 309
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
M + + PN V N +++ GKAGK + KV S +L+S KPD +T N +++
Sbjct: 310 MLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS-VLKSLGHKPDEYTWNALLTALYKAN 368
Query: 289 QIDMMEKWYEKFR--NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTST 346
+ + + + ++ R N E +N + + K ++K ++ M +TS+
Sbjct: 369 RYEDVLQLFDMIRSENLCCLNEY-LYNTAMVSCQKLGYWEKAVKLLYEMEGSGLTVSTSS 427
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
YN VI A +K ++ M K ++ T+ L+ L+ +V ++
Sbjct: 428 YNLVISACEKSRKSKVALLVYEHMAQRDCKPNTFTYLSLVRSCIWGSLWDEVEDILK--- 484
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
++ + + YNA + + + ++ +M++ PD T +M++ +K
Sbjct: 485 --KVEPDVSLYNAAIHGMCLRREFKFAKELYVKMREMGLEPDGKTRAMMLQNLKK 537
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 153/373 (41%), Gaps = 26/373 (6%)
Query: 101 EDLSERIEKKQWL----QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
E LS+R+ K L ALE+FD ++ +P + L ++G +A +F
Sbjct: 108 ETLSKRLRKLSRLDKVRSALELFDSMRFLGL-QPNAHACNSFLSCLLRNGDIQKAFTVFE 166
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP--DVFTYSTLIKPCV 214
M ++ + + TY+ +L A + A + E++ P + DV Y+T I C
Sbjct: 167 FMRKKE-NVTGHTYSLMLKAVAEVKGCESALRMFRELEREPKRRSCFDVVLYNTAISLCG 225
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES-TSCKPD 273
E ++ M + +T ++++S + + G+ + V M+ + S + D
Sbjct: 226 RINNVYETERIWRVMKGDGHIGTEITYSLLVSIFVRCGRSELALDVYDEMVNNKISLRED 285
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVME 333
M +IS + D+ K ++ G++P N LI + GK + V
Sbjct: 286 --AMYAMISACTKEEKWDLALKIFQSMLKKGMKPNLVACNTLINSLGKAGKVGLVFKVYS 343
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA- 392
++ L T+N ++ A +++ FD +R+E + CCL N
Sbjct: 344 VLKSLGHKPDEYTWNALLTALYKANRYEDVLQLFDMIRSENL-------CCLNEYLYNTA 396
Query: 393 -------GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQC 445
G + K + + E + +T+ YN V+SAC K+ V++ M C
Sbjct: 397 MVSCQKLGYWEKAVKLLYEMEGSGLTVSTSSYNLVISACEKSRKSKVALLVYEHMAQRDC 456
Query: 446 PPDDTTYTIMIEA 458
P+ TY ++ +
Sbjct: 457 KPNTFTYLSLVRS 469
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 112/256 (43%), Gaps = 3/256 (1%)
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAAR--SIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
TY+ ++ FDL+ L +M S + T + V+ K+GK+++
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFL 227
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK 322
M +S K D MN+++ I+ + + K + I+P+ RTFNILI + K
Sbjct: 228 EMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFD-TIKPDARTFNILIHGFCKA 286
Query: 323 RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
R +D +M+ M+ +F TY + +EA+ GD + + ++MR G + T+
Sbjct: 287 RKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTY 346
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
+++ + + + + ++ + FY++++ +K + +F+ M +
Sbjct: 347 TIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTN 406
Query: 443 NQCPPDDTTYTIMIEA 458
D Y MI A
Sbjct: 407 QGVRRDVLVYNTMISA 422
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 4/221 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEE-GCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
T K++ L KSG+ ++A F M + G +L+ A + N ++ A +
Sbjct: 205 TMSKVMRRLAKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF-- 262
Query: 193 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
+K +PD T++ LI A KFD + + M P+ VT + Y K G
Sbjct: 263 LKLFDTIKPDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEG 322
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
F ++ ++L M E+ C P+V T ++ G Q+ YEK + G P+ + +
Sbjct: 323 DFRRVNEMLEEMREN-GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFY 381
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ LI K + + + E M YN +I A
Sbjct: 382 SSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVLVYNTMISA 422
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 77/169 (45%), Gaps = 4/169 (2%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
+++ A + D++K F P TY + K G R ++ M E GC+P+ T
Sbjct: 287 RKFDDARAMMDLMKVTEF-TPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVT 345
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
YT ++ + +S + EA + +MK C PD YS+LI +F ++EDM
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKEDG-CVPDAKFYSSLIHILSKTGRFKDAAEIFEDM 404
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM--LESTSCKPDVWT 276
+ + + + N ++S + + ++L M E SC P+V T
Sbjct: 405 TNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVET 453
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 107/263 (40%), Gaps = 11/263 (4%)
Query: 116 LEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLA 175
L++FD +K P T+ LI K+ + AR + M P TYT+ +
Sbjct: 263 LKLFDTIK------PDARTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVE 316
Query: 176 AYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIM 235
AYC+ +L EM+ + C P+V TY+ ++ + + +YE M +
Sbjct: 317 AYCKEGDFRRVNEMLEEMRENG-CNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCV 375
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
P+ + ++ K G+F ++ M + + DV NT+IS + + +M +
Sbjct: 376 PDAKFYSSLIHILSKTGRFKDAAEIFEDM-TNQGVRRDVLVYNTMISAALHHSRDEMALR 434
Query: 296 WYEKFRNFGIE---PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
++ + E P T+ L+ K+ + ++ +M K STY +I
Sbjct: 435 LLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIR 494
Query: 353 AFTDVGDAKNMEYTFDQMRAEGM 375
G + F++ +GM
Sbjct: 495 GLCMSGKVEEACLFFEEAVRKGM 517
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 76/191 (39%), Gaps = 43/191 (22%)
Query: 311 TFNILIGAYGKKRMYDKM------------------STVMEYMRKLQFPWTTSTYNNVIE 352
T+N ++ GK R +D M T+ + MR+L + YN ++
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLA---KSGKYNKAVD 224
Query: 353 AFTDV-------GDAKNMEYTFDQMRAEG---------------MKADSKTFCCLINGFA 390
AF ++ D M D + E +K D++TF LI+GF
Sbjct: 225 AFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFC 284
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
A F + + L + E + Y + + A K D + + + M++N C P+
Sbjct: 285 KARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVV 344
Query: 451 TYTIMIEAYRK 461
TYTI++ + K
Sbjct: 345 TYTIVMHSLGK 355
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 122/285 (42%), Gaps = 2/285 (0%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LI +L +G+ +A+ F + P+ ++ L+ + + A + +EM
Sbjct: 157 LINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEME 216
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ QP V TY++LI + L EDM + I PN VT +++ G G++++
Sbjct: 217 V-QPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEA 275
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
+K++ M E CKP + ++S G G+ID + + + I+P+ +NIL+
Sbjct: 276 KKLMFDM-EYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVN 334
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
+ + V+ M+ +TY +I+ F + D + + M A
Sbjct: 335 HLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCP 394
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
TF C++ G G +++ K ++ + + +LS
Sbjct: 395 TPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLS 439
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 132/290 (45%), Gaps = 18/290 (6%)
Query: 184 DEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNI 243
+EA S+ ++ + + D +YS+LI + FD V+ + + R++
Sbjct: 63 EEALSLFHQYQEMGF-RHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMG 121
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
++ YGKAG D+ V + S C + ++NT+I+V + G+++ + +++ ++
Sbjct: 122 LIQHYGKAGSVDKAIDVFHK-ITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDM 180
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT---DVGDA 360
+ P + +FNILI + K ++ V + M +++ + TYN++I D+G A
Sbjct: 181 RLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKA 240
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
K++ + M + ++ ++ TF L+ G G +++ + E Y +
Sbjct: 241 KSL---LEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGIL 297
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI----------EAYR 460
+S K + E + + MK + PD Y I++ EAYR
Sbjct: 298 MSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYR 347
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 120 DMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCR 179
DM+K+ P T+ L+ L G+ + A++L M GC P Y L++ +
Sbjct: 246 DMIKKR--IRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGK 303
Query: 180 SNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTV 239
+DEA +L EMK + +PDV Y+ L+ + + +M + PN
Sbjct: 304 RGRIDEAKLLLGEMKKRRI-KPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAA 362
Query: 240 TQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
T +++ G+ + FD VL++ML S C P T +++ G +D
Sbjct: 363 TYRMMIDGFCRIEDFDSGLNVLNAMLASRHC-PTPATFVCMVAGLIKGGNLD 413
>AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:17160224-17162221 REVERSE
LENGTH=665
Length = 665
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 110/214 (51%), Gaps = 3/214 (1%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
LS ++ W + + + +++ +P+ + ++V K+ + A Q+F M++ G
Sbjct: 430 LSAASKRGIWRWGVRLLNKMEDKGL-KPQRRHWNAVLVACSKASETTAAIQIFKAMVDNG 488
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P+ +Y ALL+A + L DEAF + N M + +P+++ Y+T+ KF+L+
Sbjct: 489 EKPTVISYGALLSALEKGKLYDEAFRVWNHMIKVGI-EPNLYAYTTMASVLTGQQKFNLL 547
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ L ++MA++ I P+ VT N V+SG + G + M +S + +P+ T +I
Sbjct: 548 DTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRM-KSENVEPNEITYEMLIE 606
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
N + + + + K +N G++ ++ ++ ++
Sbjct: 607 ALANDAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/279 (21%), Positives = 126/279 (45%), Gaps = 14/279 (5%)
Query: 117 EVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY------ 170
E++ ++E F E LI L+GK+ + A +++ +++EG +P+ +Y
Sbjct: 367 ELYKRIRER-FSEISLSVCNHLIWLMGKAKKWWAALEIYEDLLDEGPEPNNLSYELVVSH 425
Query: 171 -TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
LL+A + + +LN+M++ L +P ++ ++ C A + +++ M
Sbjct: 426 FNILLSAASKRGIWRWGVRLLNKMEDKGL-KPQRRHWNAVLVACSKASETTAAIQIFKAM 484
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
P ++ +LS K +D+ +V + M++ +P+++ T+ SV +
Sbjct: 485 VDNGEKPTVISYGALLSALEKGKLYDEAFRVWNHMIK-VGIEPNLYAYTTMASVLTGQQK 543
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
++++ ++ + GIEP TFN +I + + M+ TY
Sbjct: 544 FNLLDTLLKEMASKGIEPSVVTFNAVISGCARNGLSGVAYEWFHRMKSENVEPNEITYEM 603
Query: 350 VIEAFTDVGDAK-NMEYTFD-QMRAEGMKADSKTFCCLI 386
+IEA + DAK + Y + + EG+K SK + ++
Sbjct: 604 LIEALAN--DAKPRLAYELHVKAQNEGLKLSSKPYDAVV 640
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 132/346 (38%), Gaps = 42/346 (12%)
Query: 141 LLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ 200
LLG A ++ M EEG P+ TY L+ Y +A IL+ K +
Sbjct: 193 LLGAMRGFGEAEKILKDMEEEGIVPNIVTYNTLMVIYMEEGEFLKALGILDLTKEKGF-E 251
Query: 201 PDVFTYSTLI------KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
P+ TYST + + + A +F VEL E A R I + GY +F
Sbjct: 252 PNPITYSTALLVYRRMEDGMGALEF-FVEL-REKYAKREIGNDV--------GYDWEFEF 301
Query: 255 DQME----KVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
++E ++ ++ K D WT + K + G+ P
Sbjct: 302 VKLENFIGRICYQVMRRWLVKDDNWTTRVL--------------KLLNAMDSAGVRPSRE 347
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
LI A ++ Y + + +R+ + S N++I ++ +
Sbjct: 348 EHERLIWACTREEHYIVGKELYKRIRERFSEISLSVCNHLIWLMGKAKKWWAALEIYEDL 407
Query: 371 RAEGMKADSKT-------FCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSA 423
EG + ++ + F L++ + G++ + + E + +NAVL A
Sbjct: 408 LDEGPEPNNLSYELVVSHFNILLSAASKRGIWRWGVRLLNKMEDKGLKPQRRHWNAVLVA 467
Query: 424 CTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
C+KA + ++FK M DN P +Y ++ A K + D+ +
Sbjct: 468 CSKASETTAAIQIFKAMVDNGEKPTVISYGALLSALEKGKLYDEAF 513
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/345 (22%), Positives = 141/345 (40%), Gaps = 43/345 (12%)
Query: 117 EVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAA 176
+V LK + P E + +I G+ P RA +F M + C + ++ +LL+A
Sbjct: 68 QVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMPQYRCQRTVKSLNSLLSA 127
Query: 177 YCRSNLLD---EAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ L+ E S ++E +PD TY+ LI C + FD L+++M +
Sbjct: 128 LLKCGELEKMKERLSSIDEFG-----KPDACTYNILIHGCSQSGCFDDALKLFDEMVKKK 182
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ P VT ++ G K + + K+ ML+ +P V ++I +G++
Sbjct: 183 VKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFA 242
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K ++ I+ + ++ LI + K +++S ++E M + T TYN +I
Sbjct: 243 FKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLING 302
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
F D+++ D+M +G+K D VIS
Sbjct: 303 FCVENDSESANRVLDEMVEKGLKPD-------------------VIS------------- 330
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
YN +L + + E +F+ M C PD +Y I+ +
Sbjct: 331 ---YNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDG 372
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 127/284 (44%), Gaps = 12/284 (4%)
Query: 127 FYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEA 186
F +P TY LI +SG A +LF M+++ P+ T+ L+ C+ + + EA
Sbjct: 147 FGKPDACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEA 206
Query: 187 FSILNEMKNHPLCQPDVFTYSTLIKPCVD----AFKFDLVELLYEDMAARSIMPNTVTQN 242
+ ++M +P V Y++LIK +F F L + YE I + +
Sbjct: 207 LKMKHDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEG----KIKVDAAIYS 262
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
++S KAG+ +++ +L M E CKPD T N +I+ F + + ++
Sbjct: 263 TLISSLIKAGRSNEVSMILEEMSEK-GCKPDTVTYNVLINGFCVENDSESANRVLDEMVE 321
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
G++P+ ++N+++G + + + +++ + + E M + T +Y V + + +
Sbjct: 322 KGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEE 381
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAG---LFHKVISTVQ 403
D+M +G K + +G + KVIS++
Sbjct: 382 AAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLH 425
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/256 (19%), Positives = 99/256 (38%), Gaps = 41/256 (16%)
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN--------------- 286
+I+++ G + FD++++VL + T P +I+ FG
Sbjct: 51 DIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGRGKLPSRALHMFDEMP 110
Query: 287 --------------------MGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYD 326
G+++ M++ FG +P+ T+NILI + +D
Sbjct: 111 QYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACTYNILIHGCSQSGCFD 169
Query: 327 KMSTVMEYMRKLQFPWTTSTYNNVIEAF---TDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+ + M K + T T+ +I + V +A M++ D ++ G++ +
Sbjct: 170 DALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKH--DMLKVYGVRPTVHIYA 227
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
LI G A + +I + Y+ ++S+ KA E+ + + M +
Sbjct: 228 SLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEK 287
Query: 444 QCPPDDTTYTIMIEAY 459
C PD TY ++I +
Sbjct: 288 GCKPDTVTYNVLINGF 303
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 130/342 (38%), Gaps = 21/342 (6%)
Query: 131 KEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDP------SPETYTALLAAYCRSNLLD 184
K + +L LL + P A +LF E +P S Y ++ S + D
Sbjct: 5 KSVSSFRLASLLRRENDPSAAMKLFRNPDPESTNPKRPFRYSLLCYDIIITKLGGSKMFD 64
Query: 185 EAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIV 244
E +L +K P + +I F +L + MP Q V
Sbjct: 65 ELDQVLLHLKTDTRIVPTEIIFCNVIN------FFGRGKLPSRALHMFDEMPQYRCQRTV 118
Query: 245 ------LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYE 298
LS K G+ ++M++ LSS+ E KPD T N +I G D K ++
Sbjct: 119 KSLNSLLSALLKCGELEKMKERLSSIDEFG--KPDACTYNILIHGCSQSGCFDDALKLFD 176
Query: 299 KFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDV 357
+ ++P TF LI G R+ + + + ++ T Y ++I+A +
Sbjct: 177 EMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGVRPTVHIYASLIKALCQI 236
Query: 358 GDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFY 417
G+ D+ +K D+ + LI+ AG ++V ++ + +T Y
Sbjct: 237 GELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTY 296
Query: 418 NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
N +++ D RV M + PD +Y +++ +
Sbjct: 297 NVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVF 338
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 67/179 (37%), Gaps = 34/179 (18%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
Y LI L K+G+ + + M E+GC P TY L+ +C N + A +L+E
Sbjct: 259 AIYSTLISSLIKAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDE 318
Query: 193 MKNHPL----------------------------------CQPDVFTYSTLIKPCVDAFK 218
M L C PD +Y + + +
Sbjct: 319 MVEKGLKPDVISYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQ 378
Query: 219 FDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
F+ ++ ++M + P L ++GK + + KV+SS+ + DVW++
Sbjct: 379 FEEAAVILDEMLFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSV 437
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 158/365 (43%), Gaps = 53/365 (14%)
Query: 138 LIVLLGKSGQPHRARQLFTTM-IEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
L+ + G+SG AR++ M + + ++ +LL+AY L+DEA ++ +EM+
Sbjct: 181 LVNVYGRSGYFEIARKVLDRMPVRDAV-----SWNSLLSAYLEKGLVDEARALFDEME-- 233
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
+ +V +++ +I A + +++ M R + V+ N +++ Y G +++
Sbjct: 234 ---ERNVESWNFMISGYAAAGLVKEAKEVFDSMPVRDV----VSWNAMVTAYAHVGCYNE 286
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI 316
+ +V + ML+ ++ KPD +T+ +++S ++G + E + GIE E L+
Sbjct: 287 VLEVFNKMLDDSTEKPDGFTLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALV 346
Query: 317 GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
Y K DK V K ST+N++I + G K+ F +M EG K
Sbjct: 347 DMYSKCGKIDKALEVFRATSKRD----VSTWNSIISDLSVHGLGKDALEIFSEMVYEGFK 402
Query: 377 ADSKTFCCLINGFANAGLFHK------VISTV---------------------------Q 403
+ TF +++ + G+ + ++S+V +
Sbjct: 403 PNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVDLLGRMGKIEEAEE 462
Query: 404 LAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
L + E + ++L AC + L + ER+ R+ + D + Y M Y +G
Sbjct: 463 LVNEIPADEASILLESLLGACKRFGQLEQAERIANRLLELNL-RDSSGYAQMSNLYASDG 521
Query: 464 MNDKI 468
+K+
Sbjct: 522 RWEKV 526
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 126/292 (43%), Gaps = 19/292 (6%)
Query: 103 LSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG 162
+ER + +Q F MLK F++ + KL+ + +P + + G
Sbjct: 45 FTERAKSLTEIQQAHAF-MLKTGLFHDTFSAS--KLVAFAATNPEPKTVSYAHSILNRIG 101
Query: 163 CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV 222
P+ T+ +++ AY S+ + A ++ EM P+ PD ++++ ++K C F+
Sbjct: 102 -SPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVF-PDKYSFTFVLKACAAFCGFEEG 159
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
++ ++ + +N +++ YG++G F+ KVL M D + N+++S
Sbjct: 160 RQIHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRM-----PVRDAVSWNSLLS 214
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ G +D +++ +E ++N +I Y + + V + M
Sbjct: 215 AYLEKGLVDEARALFDEMEERNVE----SWNFMISGYAAAGLVKEAKEVFDSMPVRD--- 267
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGM-KADSKTFCCLINGFANAG 393
++N ++ A+ VG + F++M + K D T +++ A+ G
Sbjct: 268 -VVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLG 318
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 19/289 (6%)
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF 217
M EEG +P TY L+++YCR L EAF + M + PD+ TY++LIK
Sbjct: 262 MEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVV-PDLVTYTSLIKGLCKDG 320
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
+ + M R I P+ ++ N ++ Y K G Q +K+L ML S PD +T
Sbjct: 321 RVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEML-GNSVVPDRFTC 379
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA-------YGKKRMYDKMST 330
I+ F G++ + + R ++ + LI + + K + D++
Sbjct: 380 KVIVEGFVREGRLLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIE 439
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ K TYNN+IE+ + + +++ + D+KT+ LI
Sbjct: 440 EEGHEAK------PETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLC 493
Query: 391 NAGLFHKVISTVQLAEKF--EIAENTTFYNAVLSACTKAEDLMEMERVF 437
G + S +AE F E+ ++ A++ K D + ER+
Sbjct: 494 RIGRNREAESL--MAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLL 540
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 94/225 (41%), Gaps = 1/225 (0%)
Query: 239 VTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYE 298
V ++++ GY K G ++ +V +L+S V T N +++ + ++ + Y
Sbjct: 167 VVFDMLVKGYLKLGLVEEGFRVFREVLDS-GFSVSVVTCNHLLNGLLKLDLMEDCWQVYS 225
Query: 299 KFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG 358
GI P T TFNIL + + ++ +E M + F TYN ++ ++ G
Sbjct: 226 VMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRG 285
Query: 359 DAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYN 418
K Y + M + D T+ LI G G + T I + YN
Sbjct: 286 RLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYN 345
Query: 419 AVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
++ A K + + +++ M N PD T +++E + +EG
Sbjct: 346 TLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREG 390
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/359 (20%), Positives = 148/359 (41%), Gaps = 12/359 (3%)
Query: 117 EVFDMLK--EHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
EV D L+ E +EP TY L+ + G+ A L+ M P TYT+L+
Sbjct: 254 EVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLI 313
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARS 233
C+ + EA + M + + +PD +Y+TLI C + +LL+E M S
Sbjct: 314 KGLCKDGRVREAHQTFHRMVDRGI-KPDCMSYNTLIYAYCKEGMMQQSKKLLHE-MLGNS 371
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV--WTMNTIISVFGNMGQID 291
++P+ T +++ G+ + G+ + ++ ++E K D+ + +I G+
Sbjct: 372 VVPDRFTCKVIVEGFVREGR---LLSAVNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPF 428
Query: 292 MMEKWYEK-FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ ++ G E + T+N LI + + ++ + ++ TY +
Sbjct: 429 AAKHLLDRIIEEEGHEAKPETYNNLIESLSRCDAIEEALVLKGKLKNQNQVLDAKTYRAL 488
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL-AEKFE 409
I +G + E +M +K DS L+ G+ F K + L A +F
Sbjct: 489 IGCLCRIGRNREAESLMAEMFDSEVKPDSFICGALVYGYCKELDFDKAERLLSLFAMEFR 548
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI 468
I + ++ + V + C + + +RM+ P+ T +I+ + + + +
Sbjct: 549 IFDPESYNSLVKAVCETGCGYKKALELQERMQRLGFVPNRLTCKYLIQVLEQPSLPNHL 607
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 106/268 (39%), Gaps = 26/268 (9%)
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
D+ R PN ++L + KF + L ++E TS K +V ++S
Sbjct: 106 DLGKR---PNVGNYCLLLHILVSSKKFPLAMQFLCELIELTSKKEEVDVFRVLVSATDEC 162
Query: 288 G----QIDMMEKWY-------EKFRNF------GIEPETRTFNILIGAYGKKRMYDKMST 330
DM+ K Y E FR F G T N L+ K + +
Sbjct: 163 NWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQ 222
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
V M ++ T T+N + F + + + ++ ++M EG + D T+ L++ +
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
G + ++ + + + Y +++ K + E + F RM D PD
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 451 TYTIMIEAYRKEGMNDKIYYLEQEKKTM 478
+Y +I AY KEGM ++Q KK +
Sbjct: 343 SYNTLIYAYCKEGM------MQQSKKLL 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/319 (21%), Positives = 119/319 (37%), Gaps = 29/319 (9%)
Query: 102 DLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIE- 160
D S I +W++ FD+ K P G Y L+ +L S + A Q +IE
Sbjct: 92 DASRAITFFKWVK----FDLGKR-----PNVGNYCLLLHILVSSKKFPLAMQFLCELIEL 142
Query: 161 -----------------EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+ C+ P + L+ Y + L++E F + E+ + V
Sbjct: 143 TSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVLDSGF-SVSV 201
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
T + L+ + + +Y M I PNT T NI+ + + F +++ L
Sbjct: 202 VTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEK 261
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
M E +PD+ T NT++S + G++ Y+ + P+ T+ LI K
Sbjct: 262 M-EEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDG 320
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+ M +YN +I A+ G + + +M + D T
Sbjct: 321 RVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCK 380
Query: 384 CLINGFANAGLFHKVISTV 402
++ GF G ++ V
Sbjct: 381 VIVEGFVREGRLLSAVNFV 399
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 147/378 (38%), Gaps = 41/378 (10%)
Query: 117 EVFDMLKEHSFYEPK--EGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
++F++ + S E E Y +I L + + H A ++ M +G P +Y A++
Sbjct: 290 DIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAII 349
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C+ A+ +L E P +TY L++ + E M +
Sbjct: 350 HGLCKDGGCMRAYQLLEEGSEFEF-FPSEYTYKLLMESLCKELDTGKARNVLELMLRKEG 408
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI-DMM 293
T NI L G ++ VL SML+ C+PD +T+NT+I+ MG++ D M
Sbjct: 409 ADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQG-DCRPDEYTLNTVINGLCKMGRVDDAM 467
Query: 294 EKWYEKFRNFGIEPETRTFN-ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+ + P+ T N ++ G + R + + + M + + YN VI
Sbjct: 468 KVLDDMMTGKFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIR 527
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING------------------------ 388
+ F Q+ + ADS T+ +I+G
Sbjct: 528 GLFKLHKGDEAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRH 587
Query: 389 --FANAGLFHKVISTVQLAEK----FEIAE-----NTTFYNAVLSACTKAEDLMEMERVF 437
F A + + L++ +++A+ N YN V++ C+++ E ++
Sbjct: 588 DAFVYAAFLKGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQIL 647
Query: 438 KRMKDNQCPPDDTTYTIM 455
+ M+ N PD T+ I+
Sbjct: 648 EEMRKNGQAPDAVTWRIL 665
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 124/315 (39%), Gaps = 43/315 (13%)
Query: 184 DEAFSILNEMKNHPLC----QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTV 239
DEA IL+ LC +PD S++I DA +FD + A +P+
Sbjct: 72 DEALRILD-----GLCLRGYRPDSLNLSSVIHSLCDAGRFDEAHRRFLLFLASGFIPDER 126
Query: 240 TQNIVLSG--YGKA--GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
T N++++ Y ++ + +++ E P + N +++ + ++ K
Sbjct: 127 TCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFV---PSLTNYNRLMNQLCTIYRVIDAHK 183
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
RN G P+ TF LIG Y + R + V + MR + T + +I F
Sbjct: 184 LVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFL 243
Query: 356 DVGDA----KNMEYTFDQMRAE---GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+ D K M+ ++ M+ E MKA F L++ G F+ + F
Sbjct: 244 KMRDVETGRKLMKELWEYMKNETDTSMKA--AAFANLVDSMCREGYFNDI---------F 292
Query: 409 EIAENTTF---------YNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
EIAEN + Y ++ + + R+ MK P T+Y +I
Sbjct: 293 EIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGL 352
Query: 460 RKEGMNDKIYYLEQE 474
K+G + Y L +E
Sbjct: 353 CKDGGCMRAYQLLEE 367
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/311 (19%), Positives = 121/311 (38%), Gaps = 15/311 (4%)
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
PS Y L+ C + +A ++ +M+N PDV T++TLI + + ++
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGH-LPDVVTFTTLIGGYCEIRELEVAHK 218
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
++++M I PN++T ++++ G+ K + K++ + E + D +M + F
Sbjct: 219 VFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDT-SMKA--AAF 275
Query: 285 GNMGQIDMMEK------WYEKFRNFGIEPETRT---FNILIGAYGKKRMYDKMSTVMEYM 335
N+ +D M + +E N + + +I + + R + ++ M
Sbjct: 276 ANL--VDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIM 333
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
+ ++YN +I G ++ T+ L+
Sbjct: 334 KSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDT 393
Query: 396 HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
K + ++L + E A+ T YN L ++ E+ V M C PD+ T +
Sbjct: 394 GKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTV 453
Query: 456 IEAYRKEGMND 466
I K G D
Sbjct: 454 INGLCKMGRVD 464
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 133/308 (43%), Gaps = 20/308 (6%)
Query: 101 EDLSERIEKKQWL---QALEVFDMLKEHSF-------------YEPKEGTYMKLIVLLGK 144
+D R+ K WL + L++FD +K+ SF Y+P E Y +I G+
Sbjct: 48 DDRLARLRHKDWLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQ 107
Query: 145 SGQPHRARQLFTTM-IEEGCDPSPETYTALLAAYCR-SNLLDEAFSILNEMKNHPLCQPD 202
+ ++ T+ +E+ C S E + L+ Y + ++ A IL M + C P
Sbjct: 108 AKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFG-CWPS 166
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
+++ ++ V A FD + ++ + + NI++ G ++G + ++L
Sbjct: 167 SKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLD 226
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK 322
+ S +P+V T + +I F N G+ + K E+ IEP+T TFNILI KK
Sbjct: 227 EFPQQKS-RPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285
Query: 323 RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
++ ++E M+ TY V+ D + QM + GM+ ++
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Query: 383 CCLINGFA 390
++ G
Sbjct: 346 KKMVLGLC 353
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 118/254 (46%), Gaps = 8/254 (3%)
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM-GQIDMME 294
P ++++ +G+A +D++E+V+ ++ C+ ++ ++GN+ G+I+
Sbjct: 93 PTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAI 152
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ +FG P +++FN ++ +++D++ + KL N +I+
Sbjct: 153 EILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGL 212
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
+ G+ + D+ + + + TF LI GF N G F + ++ EK I +T
Sbjct: 213 CESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDT 272
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
+N ++S K + E + +RMK C P+ TY ++ G+ DK LE +
Sbjct: 273 ITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVL-----YGLLDKKRNLEAK 327
Query: 475 K--KTMITDGIKVS 486
+ MI+ G++ S
Sbjct: 328 EMMSQMISWGMRPS 341
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/324 (20%), Positives = 137/324 (42%), Gaps = 7/324 (2%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
++G A ++ EG S + N +D + + EM + + +V
Sbjct: 160 QNGDAQGAYEVIEQTRAEGFCVSVHALNNFMGCLLNVNEIDRFWKVYKEMDSLGYVE-NV 218
Query: 204 FTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
T++ +I C ++ F+ + + Y M + PN V+ N+++ G K G ++L
Sbjct: 219 NTFNLVIYSFCKESKLFEALSVFYR-MLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLG 277
Query: 263 --SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
M+ P+ T N++I+ F G++D+ E+ G++ RT+ L+ AYG
Sbjct: 278 KMGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYG 337
Query: 321 KKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK 380
+ D+ + + M T YN+++ GD + M ++ M+ D
Sbjct: 338 RAGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRF 397
Query: 381 TFCCLINGFANAGLFHKVIS-TVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKR 439
T ++ G G + + Q++EK ++ E+ +N ++ + + L +++
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEK-KLVEDIVCHNTLMHHFVRDKKLACADQILGS 456
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG 463
M D ++ +I+ Y KEG
Sbjct: 457 MLVQGLSLDAISFGTLIDGYLKEG 480
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/363 (21%), Positives = 153/363 (42%), Gaps = 11/363 (3%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
LQ L M+ + F P TY +I K+G+ A ++ M++ G D + TY A
Sbjct: 273 LQLLGKMGMMSGN-FVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGA 331
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ AY R+ DEA + +EM + L V Y++++ + + DM ++
Sbjct: 332 LVDAYGRAGSSDEALRLCDEMTSKGLVVNTVI-YNSIVYWLFMEGDIEGAMSVLRDMNSK 390
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
++ + TQ IV+ G + G + + + E + D+ NT++ F ++
Sbjct: 391 NMQIDRFTQAIVVRGLCRNGYVKEAVEFQRQISEKKLVE-DIVCHNTLMHHFVRDKKLAC 449
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
++ G+ + +F LI Y K+ ++ + + M K+ YN+++
Sbjct: 450 ADQILGSMLVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVN 509
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK---VISTVQLAEKFE 409
+ G A E + M + D T+ L+N G + ++S +Q + E
Sbjct: 510 GLSKRGMAGAAEAVVNAMEIK----DIVTYNTLLNESLKTGNVEEADDILSKMQ-KQDGE 564
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
+ + +N +++ K + + V K M + PD TY +I ++ K +K+
Sbjct: 565 KSVSLVTFNIMINHLCKFGSYEKAKEVLKFMVERGVVPDSITYGTLITSFSKHRSQEKVV 624
Query: 470 YLE 472
L
Sbjct: 625 ELH 627
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 139/345 (40%), Gaps = 14/345 (4%)
Query: 127 FYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEA 186
F EP KL+ + K G AR++F +M E + T++A++ AY R N E
Sbjct: 110 FTEPDVFVETKLLSMYAKCGCIADARKVFDSMRER----NLFTWSAMIGAYSRENRWREV 165
Query: 187 FSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLS 246
+ M + PD F + +++ C + + ++++ + + N +L+
Sbjct: 166 AKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCLRVSNSILA 224
Query: 247 GYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIE 306
Y K G+ D K M E DV N+++ + G+ + + ++ GI
Sbjct: 225 VYAKCGELDFATKFFRRMRER-----DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGIS 279
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
P T+NILIG Y + D +M+ M T+ +I G
Sbjct: 280 PGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQALDM 339
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTK 426
F +M G+ ++ T ++ + + ++ +A K ++ N+++ +K
Sbjct: 340 FRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSK 399
Query: 427 AEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYL 471
L + +VF +K+ D T+ MI Y + G K Y L
Sbjct: 400 CGKLEDARKVFDSVKN----KDVYTWNSMITGYCQAGYCGKAYEL 440
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 142/361 (39%), Gaps = 56/361 (15%)
Query: 108 EKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP 167
+ +W + ++F ++ + P + + K++ G + + + +I+ G
Sbjct: 158 RENRWREVAKLFRLMMKDGVL-PDDFLFPKILQGCANCGDVEAGKVIHSVVIKLGMSSCL 216
Query: 168 ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTY-STLIKPCVDAFKFDLVELLY 226
++LA Y + LD A M+ + DV + S L+ C + + VEL+
Sbjct: 217 RVSNSILAVYAKCGELDFATKFFRRMR-----ERDVIAWNSVLLAYCQNGKHEEAVELVK 271
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN 286
E M I P VT NI++ GY + GK D ++ M E+ DV+T +IS +
Sbjct: 272 E-MEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKM-ETFGITADVFTWTAMISGLIH 329
Query: 287 MGQ----IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
G +DM K + G+ P T + A ++ ++ S V K+ F
Sbjct: 330 NGMRYQALDMFRKMFLA----GVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFID 385
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
N++++ ++ G ++ FD ++ + D T+ +I G+ AG
Sbjct: 386 DVLVGNSLVDMYSKCGKLEDARKVFDSVKNK----DVYTWNSMITGYCQAGY-------- 433
Query: 403 QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
C KA +L F RM+D P+ T+ MI Y K
Sbjct: 434 ---------------------CGKAYEL------FTRMQDANLRPNIITWNTMISGYIKN 466
Query: 463 G 463
G
Sbjct: 467 G 467
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 146/353 (41%), Gaps = 15/353 (4%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPK--EGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCD 164
+ W +A+E+F +E F K + T +KL+ + RQ+ ++ G +
Sbjct: 65 LRSGNWEKAVELF---REMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLE 121
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
+ +L+ Y R+ L+ + + N MK+ L + S VD D + L
Sbjct: 122 SNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVD----DAIGL 177
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L ++M + P+ VT N +LSGY G VL M + KP ++++++
Sbjct: 178 L-DEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRM-QIAGLKPSTSSISSLLQAV 235
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
G + + + + + + LI Y K V + M
Sbjct: 236 AEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIV--- 292
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
+N+++ + K+ E +M EG+K D+ T+ L +G+A G K + +
Sbjct: 293 -AWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGK 351
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIE 457
++ +A N + A+ S C+K + +VF +M++ P+ T + +++
Sbjct: 352 MKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLK 404
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 73/360 (20%), Positives = 145/360 (40%), Gaps = 54/360 (15%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LI + K+G AR +F M + + + +L++ + LL +A +++ M+
Sbjct: 266 LIDMYIKTGYLPYARMVFDMMDAK----NIVAWNSLVSGLSYACLLKDAEALMIRMEKEG 321
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ +PD T+++L K + + M + + PN V+ + SG K G F
Sbjct: 322 I-KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNA 380
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
KV M E P+ TM+T++ + G + + ++ F + N++
Sbjct: 381 LKVFIKMQEE-GVGPNAATMSTLLKILGCLSLLHSGKE----VHGFCLRK-----NLICD 430
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPW-----TTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
AY + D + ++ W + +++N ++ + G + F M
Sbjct: 431 AYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLE 490
Query: 373 EGMKADSKTFCCLINGFANAGLF-------------HKVISTVQ--------------LA 405
GM+ D+ TF +++ N+GL + +I T++ L
Sbjct: 491 AGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLD 550
Query: 406 EKFEIAE------NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
E ++ + + T + A LS+C DL E +KR++ + P + Y +MI Y
Sbjct: 551 EAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE-PHNSANYMMMINLY 609
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/337 (18%), Positives = 137/337 (40%), Gaps = 39/337 (11%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LIV+ ++G+ +R++F +M D + ++ ++L++Y + +D+A +L+EM+
Sbjct: 130 LIVMYSRNGKLELSRKVFNSMK----DRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICG 185
Query: 198 LCQPDVFTYSTLIKPCVD-AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
L +PD+ T+++L+ D + +L + M + P+T + + +L + G +
Sbjct: 186 L-KPDIVTWNSLLSGYASKGLSKDAIAVL-KRMQIAGLKPSTSSISSLLQAVAEPGHL-K 242
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI-------DMMEK-----WYEKFRNF- 303
+ K + + DV+ T+I ++ G + DMM+ W
Sbjct: 243 LGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLS 302
Query: 304 ------------------GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
GI+P+ T+N L Y +K V+ M++
Sbjct: 303 YACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVV 362
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
++ + + G+ +N F +M+ EG+ ++ T L+ L H
Sbjct: 363 SWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFC 422
Query: 406 EKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
+ + + A++ K+ DL +F +K+
Sbjct: 423 LRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKN 459
>AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR)
repeat-containing protein | chr1:6760032-6762581 FORWARD
LENGTH=725
Length = 725
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 139/332 (41%), Gaps = 7/332 (2%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y KLI + K ++ M + G P T TAL+ Y +S + A +K
Sbjct: 387 YSKLIHIHAKENHIEDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLK 446
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
++ L +PD Y +I V+A K L E L ++M A+ + + +L Y + G
Sbjct: 447 SYGL-RPDEKIYEAMILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDA 505
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
+ + SSM ++ + + +G GQ+D + +++ R G +P+ +
Sbjct: 506 NGAAGISSSMQYASDGPLSFEAYSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIAN 565
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVG---DAKNMEYTFDQMR 371
L+ AY + DK ++ + K TY +++ ++G +A+ + Q+
Sbjct: 566 LVRAYKGENSLDKALRLLLQLEKDGIEIGVITYTVLVDWMANLGLIEEAEQLLVKISQLG 625
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
+ CC+ +G N + + ++ A++ ++ N ++ V+SA +
Sbjct: 626 EAPPFELQVSLCCMYSGVRNEKKTLQALGVLE-AKRDQMGPNE--FDKVISALKRGGFEK 682
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ R++K M+ + P M+ R G
Sbjct: 683 DARRMYKYMEARKFLPSQRLQMDMVAPPRAFG 714
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 106/257 (41%), Gaps = 7/257 (2%)
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
A + PN V I L + G KV +L+ S + + +I + I
Sbjct: 342 AELLEPNRVDW-IALINQLREGNTHAYLKVAEGVLDEKSFNASISDYSKLIHIHAKENHI 400
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV 350
+ +E+ +K GI P+ T L+ Y K +++ + E ++ Y +
Sbjct: 401 EDVERILKKMSQNGIFPDILTATALVHMYSKSGNFERATEAFENLKSYGLRPDEKIYEAM 460
Query: 351 IEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK---VISTVQLAEK 407
I + + G K E +M+A+ +KA + + L+ +A G + + S++Q A
Sbjct: 461 ILGYVNAGKPKLGERLMKEMQAKELKASEEVYMALLRAYAQMGDANGAAGISSSMQYASD 520
Query: 408 FEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
++ Y+ + A KA + + + F M+ PDD ++ AY+ E DK
Sbjct: 521 GPLSFEA--YSLFVEAYGKAGQVDKAKSNFDEMRKLGHKPDDKCIANLVRAYKGENSLDK 578
Query: 468 -IYYLEQEKKTMITDGI 483
+ L Q +K I G+
Sbjct: 579 ALRLLLQLEKDGIEIGV 595
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 4/262 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y ++I L K+ + A F E GC +TY L+ + L +AF I M
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304
Query: 194 -KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
K L D TY +I + + D L++ M R + P+ + ++ GKAG
Sbjct: 305 EKTDSLL--DGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAG 362
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
+ D KV M + +P ++I + G++D + +++ + G P +
Sbjct: 363 RLDTSMKVYMEM-QGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLY 421
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
++I ++ K + TV + M K F T STY+ ++E G + ++ M
Sbjct: 422 TMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTN 481
Query: 373 EGMKADSKTFCCLINGFANAGL 394
G++ ++ L+ AN L
Sbjct: 482 AGLRPGLSSYISLLTLLANKRL 503
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/296 (20%), Positives = 119/296 (40%), Gaps = 3/296 (1%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY +I L KSG+ A +LF M E PS +++L+ + ++ LD + + EM
Sbjct: 315 TYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEM 374
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ +P + +LI A K D L+++M PN +++ + K+GK
Sbjct: 375 QGFG-HRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGK 433
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+ V M E P T + ++ + GQ+D K Y N G+ P ++
Sbjct: 434 LEVAMTVFKDM-EKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYI 492
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
L+ KR+ D ++ M+ + + + ++ D +++ M +
Sbjct: 493 SLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKW-LRFMGSS 551
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
G+K ++ L GL+ ++ + Y ++L+ + +D
Sbjct: 552 GIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVRCQD 607
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/293 (21%), Positives = 114/293 (38%), Gaps = 7/293 (2%)
Query: 183 LDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQN 242
+D A S+ K P P Y L F ++ L+E+M S ++ N
Sbjct: 185 VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244
Query: 243 I---VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEK 299
V+ KA K + ES CK D T N ++ +F N G + YE
Sbjct: 245 AYNQVIQYLAKAEKLEVAFCCFKKAQES-GCKIDTQTYNNLMMLFLNKGLPYKAFEIYES 303
Query: 300 FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
+ T+ ++I + K D + + M++ + + S +++++++ G
Sbjct: 304 MEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGR 363
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
+ +M+ G + + F LI+ +A AG + +K N Y
Sbjct: 364 LDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTM 423
Query: 420 VLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND---KIY 469
++ + K+ L VFK M+ P +TY+ ++E + G D KIY
Sbjct: 424 IIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIY 476
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/255 (19%), Positives = 106/255 (41%), Gaps = 37/255 (14%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A ++F +KE P + L+ +GK+G+ + +++ M G PS + +L+
Sbjct: 332 AFKLFQQMKERKL-RPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+Y ++ LD A + +EMK +P+ Y+ +I+ + K ++ +++DM
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGF-RPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGF 449
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGN-------- 286
+P T + +L + +G+ D K+ +SM + +P + + +++++ N
Sbjct: 450 LPTPSTYSCLLEMHAGSGQVDSAMKIYNSM-TNAGLRPGLSSYISLLTLLANKRLVDVAG 508
Query: 287 --------MG------------------QIDMMEKWYEKFRNFGIEPETRTFNILIGAYG 320
MG +D+ KW + GI+ L +
Sbjct: 509 KILLEMKAMGYSVDVCASDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCM 568
Query: 321 KKRMYDKMSTVMEYM 335
K +YD ++E +
Sbjct: 569 KNGLYDSARPLLETL 583
>AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:22366959-22368648 REVERSE
LENGTH=491
Length = 491
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 104/233 (44%), Gaps = 7/233 (3%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
TY +LL YC+ L ++A +LN+MK + P +Y++L+ + + V + ++
Sbjct: 125 TYGSLLNCYCKELLTEKAEGLLNKMKELNIT-PSSMSYNSLMTLYTKTGETEKVPAMIQE 183
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+ A ++MP++ T N+ + +E+V+ M PD T + + S++ + G
Sbjct: 184 LKAENVMPDSYTYNVWMRALAATNDISGVERVIEEMNRDGRVAPDWTTYSNMASIYVDAG 243
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR--KLQFPWTTST 346
EK ++ + + + LI YG+ K++ V R +L P T++
Sbjct: 244 LSQKAEKALQELEMKNTQRDFTAYQFLITLYGR---LGKLTEVYRIWRSLRLAIPKTSNV 300
Query: 347 -YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
Y N+I+ + D E F + +A D + LI +A GL K
Sbjct: 301 AYLNMIQVLVKLNDLPGAETLFKEWQANCSTYDIRIVNVLIGAYAQEGLIQKA 353
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/230 (19%), Positives = 96/230 (41%), Gaps = 1/230 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P +Y L+ L K+G+ + + + E P TY + A +N + +
Sbjct: 156 PSSMSYNSLMTLYTKTGETEKVPAMIQELKAENVMPDSYTYNVWMRALAATNDISGVERV 215
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
+ EM PD TYS + VDA E +++ ++ + +++ YG
Sbjct: 216 IEEMNRDGRVAPDWTTYSNMASIYVDAGLSQKAEKALQELEMKNTQRDFTAYQFLITLYG 275
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ GK ++ ++ S+ + +V +N +I V + + E +++++ +
Sbjct: 276 RLGKLTEVYRIWRSLRLAIPKTSNVAYLN-MIQVLVKLNDLPGAETLFKEWQANCSTYDI 334
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
R N+LIGAY ++ + K + + E + T+ ++ + GD
Sbjct: 335 RIVNVLIGAYAQEGLIQKANELKEKAPRRGGKLNAKTWEIFMDYYVKSGD 384
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 134/343 (39%), Gaps = 38/343 (11%)
Query: 150 RARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF--SILNEMKNHPL--------- 198
R+R L T +I C YT LL + L D+ S++ L
Sbjct: 39 RSRSLLTKLITLACSARAIAYTHLL--FLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYR 96
Query: 199 ------CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
P +T++++IK C D + + ++ +T Q +++ Y K G
Sbjct: 97 RMLSSNVSPSNYTFTSVIKSCADLSALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCG 156
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
+ +V M E + + N+++S F G D + + + R G EP++ TF
Sbjct: 157 DMEGARQVFDRMPEKS-----IVAWNSLVSGFEQNGLADEAIQVFYQMRESGFEPDSATF 211
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
L+ A + S V +Y+ +I ++ GD FD+M+
Sbjct: 212 VSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKMKE 271
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE-----IAENTTFYNAVLSACTKA 427
+ A + +I+ + G + V+L K E I N TF AVLSAC A
Sbjct: 272 TNVAA----WTAMISAYGTHGYGQQ---AVELFNKMEDDCGPIPNNVTFV-AVLSACAHA 323
Query: 428 EDLMEMERVFKRM-KDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
+ E V+KRM K + P + M++ + G D+ Y
Sbjct: 324 GLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDEAY 366
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 7/214 (3%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A++VF ++E F EP T++ L+ ++G + +I EG D + + TAL
Sbjct: 191 EAIQVFYQMRESGF-EPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAAR 232
+ Y R + +A + ++MK + +V ++ +I + VEL +
Sbjct: 250 INLYSRCGDVGKAREVFDKMK-----ETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDC 304
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
+PN VT VLS AG ++ V M +S P V ++ + G G +D
Sbjct: 305 GPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRAGFLDE 364
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYD 326
K+ + G + ++GA R YD
Sbjct: 365 AYKFIHQLDATGKATAPALWTAMLGACKMHRNYD 398
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/346 (19%), Positives = 140/346 (40%), Gaps = 38/346 (10%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
L L G + +P AR++F M E P +TA+L+A+ +++L +EA + M
Sbjct: 204 LAYLYGVNREPVDARRVFDEMPE----PDVICWTAVLSAFSKNDLYEEALGLFYAMHRGK 259
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
PD T+ T++ C + + + ++ + I N V ++ +L YGK G +
Sbjct: 260 GLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESSLLDMYGKCGSVREA 319
Query: 258 EKVLSSMLESTSC--------------------------KPDVWTMNTIISVFGNMGQID 291
+V + M + S + D++ T++ + +
Sbjct: 320 RQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDLYCFGTVLKACAGLAAVR 379
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+ ++ + ++ G + LI YGK D S V M T+N ++
Sbjct: 380 LGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVYSKMSIRNMI----TWNAML 435
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST-VQLAEKFEI 410
A G + F+ M +G+K D +F ++ + G+ + + V +A+ + I
Sbjct: 436 SALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVDEGRNYFVLMAKSYGI 495
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
T Y+ ++ +A E E + +R +C D + + +++
Sbjct: 496 KPGTEHYSCMIDLLGRAGLFEEAENLLERA---ECRNDASLWGVLL 538
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 117/262 (44%), Gaps = 15/262 (5%)
Query: 228 DMAAR--SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG 285
D A R + + + +++L G+ F M VL M+ PD+ + + F
Sbjct: 139 DWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMV-CEGVNPDLECLTIAMDSFV 197
Query: 286 NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
+ + + +E+ +FG++ T +FN L+ ++ +V +K P+ +
Sbjct: 198 RVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFDSC 256
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA 405
+YN +I ++ +G+ + ME +M G D ++ LI G G ++ +V++
Sbjct: 257 SYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTG---RINDSVEIF 313
Query: 406 EKFEIAENT---TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK- 461
+ + N YNA++ A D E R ++RM D +C P+ TY+ ++ K
Sbjct: 314 DNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKG 373
Query: 462 EGMNDKIYYLEQEKKTMITDGI 483
++D + E+ M++ G+
Sbjct: 374 RKVSDALEIFEE----MLSRGV 391
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/331 (18%), Positives = 145/331 (43%), Gaps = 13/331 (3%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
G+Y ++ LG+ + M+ EG +P E T + ++ R + + A + E
Sbjct: 152 GSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEE 211
Query: 193 MKNHPL-CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMP-NTVTQNIVLSGYGK 250
++ + C + +++ L++ + + ++ A + +P ++ + NI++SG+ K
Sbjct: 212 SESFGVKCSTE--SFNALLRCLCERSHVSAAKSVFN--AKKGNIPFDSCSYNIMISGWSK 267
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
G+ ++MEKVL M+ES PD + + +I G G+I+ + ++ ++ G P+
Sbjct: 268 LGEVEEMEKVLKEMVES-GFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDAN 326
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKL---QFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
+N +I + R +D+ M Y R++ + TY+ ++ + F
Sbjct: 327 VYNAMICNFISARDFDES---MRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIF 383
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
++M + G+ + + + G H + Q + K + + Y +L ++
Sbjct: 384 EEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRF 443
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ V+ M+++ P D Y +++
Sbjct: 444 GKCGMLLNVWDEMQESGYPSDVEVYEYIVDG 474
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 107/236 (45%), Gaps = 5/236 (2%)
Query: 237 NTVTQNIVLSGYGKA-GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF--GNMGQIDMM 293
N V + LS K G F Q K S++ +S S +++ + V GN+ M+
Sbjct: 76 NQVAIDSFLSAEDKLRGVFLQKLKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMV 135
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ R G+ + ++++++ A G+++++ M V++ M +++
Sbjct: 136 TFFDWAVREPGVTKDVGSYSVILRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDS 195
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
F V + F++ + G+K +++F L+ S A+K I +
Sbjct: 196 FVRVHYVRRAIELFEESESFGVKCSTESFNALLRCLCERSHVSAAKSVFN-AKKGNIPFD 254
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG-MNDKI 468
+ YN ++S +K ++ EME+V K M ++ PD +Y+ +IE + G +ND +
Sbjct: 255 SCSYNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSV 310
>AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:644458-648421 REVERSE
LENGTH=852
Length = 852
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 133/311 (42%), Gaps = 20/311 (6%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNE---MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELL 225
+Y LL C + +D A I E M++ L + D FTY T+IK DA + +
Sbjct: 337 SYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLLKLDAFTYCTIIKVFADAKMWKWALKV 396
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG 285
+DM + + PNT T + ++S AG +Q + ML S C+P+ N ++
Sbjct: 397 KDDMKSVGVTPNTHTWSSLISACANAGLVEQANHLFEEMLAS-GCEPNSQCFNILLHACV 455
Query: 286 NMGQIDMMEKWYEKFRNFGI-----------EPETRTFNILI-GAYGKKRMYDKMSTVME 333
Q D + ++ ++ + + T + NIL G + S ++
Sbjct: 456 EACQYDRAFRLFQSWKGSSVNESLYADDIVSKGRTSSPNILKNNGPGSLVNRNSNSPYIQ 515
Query: 334 YMRKLQFPWTTSTYNNVIEAF-TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA 392
++ F TT+TYN +++A TD K + D+M++ G+ + T+ LI+ +
Sbjct: 516 ASKRFCFKPTTATYNILLKACGTDYYRGKEL---MDEMKSLGLSPNQITWSTLIDMCGGS 572
Query: 393 GLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTY 452
G + ++ + Y + C + + L +F+ M+ Q P+ TY
Sbjct: 573 GDVEGAVRILRTMHSAGTRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTY 632
Query: 453 TIMIEAYRKEG 463
+++A K G
Sbjct: 633 NTLLKARSKYG 643
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 121/281 (43%), Gaps = 22/281 (7%)
Query: 210 IKPCVDAFKF--DLVELLYEDMAAR--SIMPNT-VTQNIVLSGYGKAGKFDQMEKVLSSM 264
IK VD F VE+ +A R ++P+T + ++ G+GK G +S M
Sbjct: 199 IKELVDPFDVVKSCVEISNPQLAIRYACLLPHTELLLCRIIHGFGKKGDM------VSVM 252
Query: 265 LESTSCK-----PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
+CK P+++ T+I V G G YE I+P N L+
Sbjct: 253 TAYEACKQILDTPNMYICRTMIDVCGLCGDYVKSRYIYEDLLKENIKPNIYVINSLMNVN 312
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD---AKNMEYTFDQMRAEGM- 375
Y V + M+ L ++YN +++ G A+++ +M + G+
Sbjct: 313 SHDLGY--TLKVYKNMQILDVTADMTSYNILLKTCCLAGRVDLAQDIYKEAKRMESSGLL 370
Query: 376 KADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMER 435
K D+ T+C +I FA+A ++ + + + NT +++++SAC A + +
Sbjct: 371 KLDAFTYCTIIKVFADAKMWKWALKVKDDMKSVGVTPNTHTWSSLISACANAGLVEQANH 430
Query: 436 VFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+F+ M + C P+ + I++ A + D+ + L Q K
Sbjct: 431 LFEEMLASGCEPNSQCFNILLHACVEACQYDRAFRLFQSWK 471
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
++P TY L+ G +R ++L M G P+ T++ L+ S ++ A
Sbjct: 522 FKPTTATYNILLKACGT--DYYRGKELMDEMKSLGLSPNQITWSTLIDMCGGSGDVEGAV 579
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
IL M + +PDV Y+T IK C + L L+E+M I PN VT N +L
Sbjct: 580 RILRTMHSAG-TRPDVVAYTTAIKICAENKCLKLAFSLFEEMRRYQIKPNWVTYNTLLKA 638
Query: 248 YGKAGKFDQMEKVLS 262
K G ++ + L+
Sbjct: 639 RSKYGSLLEVRQCLA 653
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/343 (20%), Positives = 133/343 (38%), Gaps = 39/343 (11%)
Query: 158 MIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAF 217
M+ GC P P +Y +++ + N++++ S++N ++ PDV TY ++
Sbjct: 503 MVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFV-PDVDTYLIVVNELCKKN 561
Query: 218 KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
D + + M + P + ++ GK G+ + E+ + MLES +PD
Sbjct: 562 DRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES-GIQPDEIAY 620
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
+I+ + G+ID + E+ + P + T+ +LI + K M +K ++ M +
Sbjct: 621 MIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLE 680
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANA----- 392
Y +I F GD K F M +K D + L++G A
Sbjct: 681 DGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKK 740
Query: 393 -----------GLFHKVISTVQLAE---------------------KFEIAENTTFYNAV 420
L ++I T L K I N +N +
Sbjct: 741 KRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTI 800
Query: 421 LSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
++ A L E + M+ P+ TYTI+++++ + G
Sbjct: 801 ITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAG 843
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/371 (21%), Positives = 148/371 (39%), Gaps = 20/371 (5%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V+T ++E +K A + D ++E P Y +I LGK G+ A + F
Sbjct: 547 VDTYLIVVNELCKKNDRDAAFAIIDAMEELGL-RPTVAIYSSIIGSLGKQGRVVEAEETF 605
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M+E G P Y ++ Y R+ +DEA ++ E+ H L +P FTY+ LI V
Sbjct: 606 AKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFL-RPSSFTYTVLISGFVK 664
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
+ + M + PN V ++ + K G F + L ++ K D
Sbjct: 665 MGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDF-KFSFTLFGLMGENDIKHDHI 723
Query: 276 TMNTIIS-VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL-----IGAYGKKRMYDKMS 329
T++S ++ M + + E + ++ RT ++ +G YG K S
Sbjct: 724 AYITLLSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSK------S 777
Query: 330 TVMEYMRKLQFPWTTSTY--NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
ME + K++ + Y N +I + G + M+ EG+ + T+ L+
Sbjct: 778 FAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMK 837
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
AG + S + L E + Y+ +L + ++ + M+ + P
Sbjct: 838 SHIEAG---DIESAIDLFEGTNCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINP 894
Query: 448 DDTTYTIMIEA 458
+ +Y +++
Sbjct: 895 NKDSYEKLLQC 905
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/361 (19%), Positives = 142/361 (39%), Gaps = 10/361 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ ++ + E SF E + LI K G + R +F+ MI++G + TY ++
Sbjct: 291 AMRLYLRMVERSF-ELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMI 349
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+YC+ +D A + +V Y+ LI D L M I
Sbjct: 350 GSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGI 409
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM-M 293
+P+ +T ++L K + +L S+L++ C + V ++G I++ +
Sbjct: 410 VPDHITYFVLLKMLPKCHELKYAMVILQSILDN-GCGINP-------PVIDDLGNIEVKV 461
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
E + ++ A +R Y + +E M L +YN+VI+
Sbjct: 462 ESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKC 521
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
+++ + ++ D T+ ++N + + E+ +
Sbjct: 522 LFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPT 581
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
Y++++ + K ++E E F +M ++ PD+ Y IMI Y + G D+ L +
Sbjct: 582 VAIYSSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVE 641
Query: 474 E 474
E
Sbjct: 642 E 642
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 135/330 (40%), Gaps = 37/330 (11%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSP-------------ETYTALLA- 175
P TY L+ +L K + A + ++++ GC +P E+ +A
Sbjct: 411 PDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR 470
Query: 176 ---------------AYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD 220
A C A S + +M N C P F+Y+++IK C+ F+ +
Sbjct: 471 KDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLG-CTPLPFSYNSVIK-CL--FQEN 526
Query: 221 LVE---LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTM 277
++E L + +P+ T IV++ K D ++ +M E +P V
Sbjct: 527 IIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAM-EELGLRPTVAIY 585
Query: 278 NTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRK 337
++II G G++ E+ + K GI+P+ + I+I Y + D+ + ++E + K
Sbjct: 586 SSIIGSLGKQGRVVEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVK 645
Query: 338 LQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK 397
++ TY +I F +G + D+M +G+ + + LI F G F
Sbjct: 646 HFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKF 705
Query: 398 VISTVQLAEKFEIAENTTFYNAVLSACTKA 427
+ L + +I + Y +LS +A
Sbjct: 706 SFTLFGLMGENDIKHDHIAYITLLSGLWRA 735
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/330 (21%), Positives = 132/330 (40%), Gaps = 10/330 (3%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE-M 193
Y LI K G +A L M++ G P TY LL + + L A IL +
Sbjct: 381 YTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSIL 440
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
N P V I+ V++ L E+ +D ++ VT + S
Sbjct: 441 DNGCGINPPVIDDLGNIEVKVESL---LGEIARKDANLAAVGLAVVTTALC-SQRNYIAA 496
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++EK+++ C P ++ N++I I+ + + P+ T+
Sbjct: 497 LSRIEKMVN-----LGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYL 551
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
I++ KK D +++ M +L T + Y+++I + G E TF +M
Sbjct: 552 IVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKMLES 611
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
G++ D + +IN +A G + V+ K + ++ Y ++S K + +
Sbjct: 612 GIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKG 671
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ +M ++ P+ YT +I + K+G
Sbjct: 672 CQYLDKMLEDGLSPNVVLYTALIGHFLKKG 701
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/421 (21%), Positives = 159/421 (37%), Gaps = 114/421 (27%)
Query: 141 LLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ 200
+ G+ + AR +F M T+ ++ YCR L+DEAF + EMK+ +
Sbjct: 155 MYASCGRINYARNVFDEMSHR----DVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNV-M 209
Query: 201 PDVFTYSTLIKPC-----------------------------------VDAFKFDLVELL 225
PD ++ C A D+
Sbjct: 210 PDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREF 269
Query: 226 YEDMAARSIMPNTVTQNIVLSGYGKAGK-------FDQMEK--------VLSSMLES--- 267
+ M+ R++ +T ++SGY K G+ FDQ EK ++S+ +ES
Sbjct: 270 FRKMSVRNLFVSTA----MVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYP 325
Query: 268 ------------TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL 315
+ KPDV +M ++IS N+G +D + + G+E E N L
Sbjct: 326 QEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNAL 385
Query: 316 IGAYGKKRMYDKMSTVMEYM-RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
I Y K D V E M R+ W++ +I A + G+A + F +M+ E
Sbjct: 386 INMYAKCGGLDATRDVFEKMPRRNVVSWSS-----MINALSMHGEASDALSLFARMKQEN 440
Query: 375 MKADSKTFCCLINGFANAGLFH---KVIST------------------------------ 401
++ + TF ++ G +++GL K+ ++
Sbjct: 441 VEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREA 500
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+++ E +A N + +++SAC +L + KR+ + + P D +M Y +
Sbjct: 501 LEVIESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILELE-PDHDGALVLMSNIYAR 559
Query: 462 E 462
E
Sbjct: 560 E 560
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/306 (20%), Positives = 125/306 (40%), Gaps = 2/306 (0%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
Y L+ + + G+ +L MI++G + T+ L+ + L + + K
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKSK 214
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
+P +Y+ ++ + ++ L++ +YE M P+ +T NIV+ + GK
Sbjct: 215 TFNY-RPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGKT 273
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
D++ ++L M++ PD++T N ++ + R G+EP F
Sbjct: 274 DRLYRLLDEMVKD-GFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
LI + + M+ K+ Y +I + G+ + E F +M +G
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEME 434
+ T+ +I GF AG F + + ++ E N Y+ +++ A ++E
Sbjct: 393 QLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAH 452
Query: 435 RVFKRM 440
V K M
Sbjct: 453 EVVKDM 458
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 10/178 (5%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
+ P TY L+ L +P A L M E G +P +T L+ R+ L+
Sbjct: 288 FSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACK 347
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
++E C PDV Y+ +I + + + E ++++M + +PN T N ++ G
Sbjct: 348 YFMDETVKVG-CTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRG 406
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI--------DMMEKWY 297
+ AGKF + +L M ES C P+ +T+++ N G++ DM+EK +
Sbjct: 407 FCMAGKFKEACALLKEM-ESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGH 463
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 117/282 (41%), Gaps = 12/282 (4%)
Query: 205 TYSTLIKPCVDA-FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
T++ LI C +A D+VE + + P + N +L ++ ++ V
Sbjct: 189 TFNLLICTCGEAGLARDVVEQFIKS-KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQ 247
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG--AYGK 321
MLE PDV T N ++ +G+ D + + ++ G P+ T+NIL+ A G
Sbjct: 248 MLED-GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGN 306
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
K + ++ +MR++ + +I+ + G + +Y D+ G D
Sbjct: 307 KPL--AALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 382 FCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
+ +I G+ + G K ++ EK ++ N YN+++ A E + K M
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLP-NVFTYNSMIRGFCMAGKFKEACALLKEM 423
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDG 482
+ C P+ Y+ ++ + G K+ + K M+ G
Sbjct: 424 ESRGCNPNFVVYSTLVNNLKNAG---KVLEAHEVVKDMVEKG 462
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 339 QFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKV 398
F T + Y+ +++ F + G+ K M D+M +G + TF LI AGL V
Sbjct: 147 NFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDV 206
Query: 399 ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
+ ++ F YNA+L + + ++ V+++M ++ PD TY I++ A
Sbjct: 207 VEQFIKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFA 266
Query: 459 YRKEGMNDKIYYLEQEKKTMITDG 482
+ G D++Y L E M+ DG
Sbjct: 267 NFRLGKTDRLYRLLDE---MVKDG 287
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 107/259 (41%), Gaps = 3/259 (1%)
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG-KFDQMEKVLSSM 264
Y L+K + ++ + L ++M T N+++ G+AG D +E+ + S
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLICTCGEAGLARDVVEQFIKS- 213
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
++ + +P + N I+ + Q +++ YE+ G P+ T+NI++ A +
Sbjct: 214 -KTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRLGK 272
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
D++ +++ M K F TYN ++ + MR G++ F
Sbjct: 273 TDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTT 332
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
LI+G + AG + K + Y +++ +L + E +FK M +
Sbjct: 333 LIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKG 392
Query: 445 CPPDDTTYTIMIEAYRKEG 463
P+ TY MI + G
Sbjct: 393 QLPNVFTYNSMIRGFCMAG 411
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/383 (21%), Positives = 147/383 (38%), Gaps = 50/383 (13%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
+ A +VFD + + Y ++ ++ KSG RAR +F +M E ++
Sbjct: 99 IDACKVFDQMHLRNLY-----SWNNMVSGYVKSGMLVRARVVFDSMPER----DVVSWNT 149
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
++ Y + L EA E + + + + F+++ L+ CV + + L + +
Sbjct: 150 MVIGYAQDGNLHEALWFYKEFRRSGI-KFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA 208
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
+ N V ++ Y K G QME E T +WT T+IS + +G ++
Sbjct: 209 GFLSNVVLSCSIIDAYAKCG---QMESAKRCFDEMTVKDIHIWT--TLISGYAKLGDMEA 263
Query: 293 MEK------------W-------------------YEKFRNFGIEPETRTFNILIGAYGK 321
EK W + K G++PE TF+ + A
Sbjct: 264 AEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASAS 323
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
+ YM + +++I+ ++ G + E F R K D
Sbjct: 324 IASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEASERVF---RICDDKHDCVF 380
Query: 382 FCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMK 441
+ +I+ A GL HK + + KF + N T +L+AC+ + + E R F+ M
Sbjct: 381 WNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMT 440
Query: 442 -DNQCPPDDTTYTIMIEAYRKEG 463
+ PD Y +I+ + G
Sbjct: 441 VQHGIVPDQEHYACLIDLLGRAG 463
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 113/291 (38%), Gaps = 48/291 (16%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK 194
+ LI K G A +LF M E+ +P ++TAL+A Y R + A + +M
Sbjct: 248 WTTLISGYAKLGDMEAAEKLFCEMPEK----NPVSWTALIAGYVRQGSGNRALDLFRKMI 303
Query: 195 NHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
+ +P+ FT+S+ + + ++ M ++ PN + + ++ Y K+G
Sbjct: 304 ALGV-KPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSL 362
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
+ E+V + C W NT+IS G + + F ++P T +
Sbjct: 363 EASERVFRICDDKHDCV--FW--NTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVV 418
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE- 373
++ A + V E +R W F+ M +
Sbjct: 419 ILNACSHSGL------VEEGLR-----W------------------------FESMTVQH 443
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSAC 424
G+ D + + CLI+ AG F +++ + E+ + +NA+L C
Sbjct: 444 GIVPDQEHYACLIDLLGRAGCFKELMRKI---EEMPFEPDKHIWNAILGVC 491
>AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:30285358-30286704 REVERSE
LENGTH=448
Length = 448
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 165/388 (42%), Gaps = 37/388 (9%)
Query: 112 WLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMI-EEGCDPSPETY 170
W +ALE F+ ++ S + T+ ++I +LGK + + L MI P+ T+
Sbjct: 61 WQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTF 120
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY-EDM 229
+ Y ++L+ EA +++ + L F Y+ + C + EL + +++
Sbjct: 121 RIVFKRYVTAHLVQEAIDAYDKLDDFNLRDETSF-YNLVDALCEHKHVVEAEELCFGKNV 179
Query: 230 AARSI-MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+ NT N++L G+ K G + + ++ M ++ D+++ + + + G
Sbjct: 180 IGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKM-DTEGVTKDLFSYSIYMDIMCKSG 238
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
+ K Y++ ++ ++ + +N +I A G + + V MR+ +T+N
Sbjct: 239 KPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHN 298
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN----AGLFHKVIST--- 401
+I+ + G ++ D+M G + DS T+ CL + LF ++I +
Sbjct: 299 TIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVR 358
Query: 402 ------VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIM 455
V L KF E F VL V+K MK++ PD Y +
Sbjct: 359 PKMDTYVMLMRKF---ERWGFLQPVLY-------------VWKTMKESGDTPDSAAYNAV 402
Query: 456 IEAYRKEGMNDKIYYLEQEKKTMITDGI 483
I+A ++GM D E+E MI G+
Sbjct: 403 IDALIQKGMLDMAREYEEE---MIERGL 427
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 13/181 (7%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
Y +I +G S ++F M E GC+P+ T+ ++ C + +A+ +L+EM
Sbjct: 261 AYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEM 320
Query: 194 KNHPLCQPDVFTY----STLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
CQPD TY S L KP + L+ M + P T +++ +
Sbjct: 321 PKRG-CQPDSITYMCLFSRLEKP-------SEILSLFGRMIRSGVRPKMDTYVMLMRKFE 372
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ G + V +M ES PD N +I G +DM ++ E+ G+ P
Sbjct: 373 RWGFLQPVLYVWKTMKESGDT-PDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRR 431
Query: 310 R 310
R
Sbjct: 432 R 432
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 143/356 (40%), Gaps = 34/356 (9%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+Y +I + G A +LF M EEG P T TA+L R LLDE + +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
K + L D+F + L+ EL++ +M + I ++ N ++ GY K
Sbjct: 424 KENDL-GFDIFVSNALMDMYAKCGSMQEAELVFSEMRVKDI----ISWNTIIGGYSKNCY 478
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
++ + + +LE PD T+ ++ ++ D + + G + N
Sbjct: 479 ANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVAN 538
Query: 314 ILIGAYGK-------KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYT 366
L+ Y K ++D +++ K WT +I + G K
Sbjct: 539 SLVDMYAKCGALLLAHMLFDDIAS------KDLVSWTV-----MIAGYGMHGFGKEAIAL 587
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE-KFEIAENTTFYNAVLSACT 425
F+QMR G++AD +F L+ +++GL + + + +I Y ++
Sbjct: 588 FNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLA 647
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYR-------KEGMNDKIYYLEQE 474
+ DL++ R + M PPD T + ++ R E + +K++ LE E
Sbjct: 648 RTGDLIKAYRFIENMP---IPPDATIWGALLCGCRIHHDVKLAEKVAEKVFELEPE 700
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 95/233 (40%), Gaps = 9/233 (3%)
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
NI+++ K+G F + M+ S+ + D +T + + F ++ + E+ +
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMM-SSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 222
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
G N L+ Y K + D V + M + ++N++I + G A+
Sbjct: 223 KSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVI----SWNSIINGYVSNGLAE 278
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
F QM G++ D T + G A++ L + + K + F N +L
Sbjct: 279 KGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLL 338
Query: 422 SACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQE 474
+K DL + VF+ M D +YT MI Y +EG+ + L +E
Sbjct: 339 DMYSKCGDLDSAKAVFREMSDRSV----VSYTSMIAGYAREGLAGEAVKLFEE 387
>AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8183594-8185180 REVERSE
LENGTH=501
Length = 501
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/323 (21%), Positives = 133/323 (41%), Gaps = 44/323 (13%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG-CDPSPETYTA 172
+ L VFD K E Y ++I L + A + F +MI++ PS E Y +
Sbjct: 113 EILPVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNS 172
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
++ +Y +EA LN MK + L P TY LI+ +D + L + M +
Sbjct: 173 IIHSYADDGKFEEAMFYLNHMKENGLL-PITETYDGLIEAYGKWKMYDEIVLCLKRMESD 231
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML-ESTSCKPDVWTMNTIISVFGNMGQID 291
+ + VT N+++ + + G +ME++ S++ + +P T+ +++ + G I+
Sbjct: 232 GCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPS--TLLSMLEAYAEFGLIE 289
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST--------------------- 330
ME+ K FGI + L Y + M+ ++
Sbjct: 290 KMEETCNKIIRFGISLDEGLVRKLANVYIENLMFSRLDDLGRGISASRTRRTELAWCLRL 349
Query: 331 --------------VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
V++ M + + PW T+ N + A++ +GD ++E ++R + +K
Sbjct: 350 LCHARLVSRKGLDYVVKEMEEARVPWNTTFANIALLAYSKMGDFTSIELLLSELRIKHVK 409
Query: 377 ADSKTFCCLIN----GFANAGLF 395
D T + + F G+F
Sbjct: 410 LDLVTVGIVFDLSEARFDGTGVF 432
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 18/218 (8%)
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS-------SMLESTSCKPDVWTMNTIISVF 284
+++ P+ +++N Y + +F EK +S SM++ P + N+II +
Sbjct: 122 KNLEPSRISEN----NYERIIRFLCEEKSMSEAIRAFRSMIDDHELSPSLEIYNSIIHSY 177
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+ G+ + + + G+ P T T++ LI AYGK +MYD++ ++ M
Sbjct: 178 ADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKMYDEIVLCLKRMESDGCVRDH 237
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
TYN +I F+ G K ME + + + M + T ++ +A GL K+ T
Sbjct: 238 VTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLLSMLEAYAEFGLIEKMEETCNK 297
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
+F I+ + + A E+LM F R+ D
Sbjct: 298 IIRFGISLDEGLVRKL--ANVYIENLM-----FSRLDD 328
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 65/324 (20%), Positives = 120/324 (37%), Gaps = 2/324 (0%)
Query: 135 YMKLIVLLGKSGQPHRARQLFTTMIE-EGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+ +I L +S + H +F T E S Y ++ C + EA M
Sbjct: 98 FWAVIRFLRQSSRLHEILPVFDTWKNLEPSRISENNYERIIRFLCEEKSMSEAIRAFRSM 157
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ P + Y+++I D KF+ M ++P T T + ++ YGK
Sbjct: 158 IDDHELSPSLEIYNSIIHSYADDGKFEEAMFYLNHMKENGLLPITETYDGLIEAYGKWKM 217
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+D++ L M ES C D T N +I F G + ME+ Y+ + + E T
Sbjct: 218 YDEIVLCLKRM-ESDGCVRDHVTYNLLIREFSRGGLLKRMEQMYQSLMSRKMTLEPSTLL 276
Query: 314 ILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE 373
++ AY + + +KM + + + + + ++ + A
Sbjct: 277 SMLEAYAEFGLIEKMEETCNKIIRFGISLDEGLVRKLANVYIENLMFSRLDDLGRGISAS 336
Query: 374 GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEM 433
+ +C + A + V+ E+ + NTTF N L A +K D +
Sbjct: 337 RTRRTELAWCLRLLCHARLVSRKGLDYVVKEMEEARVPWNTTFANIALLAYSKMGDFTSI 396
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIE 457
E + ++ D T I+ +
Sbjct: 397 ELLLSELRIKHVKLDLVTVGIVFD 420
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 150/361 (41%), Gaps = 26/361 (7%)
Query: 118 VFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPE---TYTALL 174
VFD F P + +I S +P R+ L+ M+ C +P T+ +LL
Sbjct: 71 VFD-----GFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRML---CSSAPHNAYTFPSLL 122
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
A + +E I ++ + DV+ ++LI F L LL++ R
Sbjct: 123 KACSNLSAFEETTQIHAQITKLGY-ENDVYAVNSLINSYAVTGNFKLAHLLFD----RIP 177
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
P+ V+ N V+ GY KAGK D + M E + WT T+IS +
Sbjct: 178 EPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAIS---WT--TMISGYVQADMNKEAL 232
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF 354
+ + + +N +EP+ + + A + ++ + Y+ K + + +I+ +
Sbjct: 233 QLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMY 292
Query: 355 TDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENT 414
G+ + F ++ + ++A + LI+G+A G + IS +K I N
Sbjct: 293 AKCGEMEEALEVFKNIKKKSVQA----WTALISGYAYHGHGREAISKFMEMQKMGIKPNV 348
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRM-KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQ 473
+ AVL+AC+ + E + +F M +D P Y +++ + G+ D+ Q
Sbjct: 349 ITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQ 408
Query: 474 E 474
E
Sbjct: 409 E 409
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/374 (18%), Positives = 150/374 (40%), Gaps = 21/374 (5%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ SE E ++ VF + F P ++ +I + Q+
Sbjct: 74 NTLVRGYSESDEPHN---SVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGFQMHC 130
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
++ G + T L+ Y ++ A + +EM QP++ ++ +I C
Sbjct: 131 QALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMH-----QPNLVAWNAVITACFRG 185
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
+++ M R N + N++L+GY KAG+ + +++ S M + DV +
Sbjct: 186 NDVAGAREIFDKMLVR----NHTSWNVMLAGYIKAGELESAKRIFSEMPH----RDDV-S 236
Query: 277 MNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR 336
+T+I + G + ++ + + G+ P + ++ A + ++ + ++
Sbjct: 237 WSTMIVGIAHNGSFNESFLYFRELQRAGMSPNEVSLTGVLSACSQSGSFEFGKILHGFVE 296
Query: 337 KLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFH 396
K + W S N +I+ ++ G+ F+ M+ K ++ +I G A G
Sbjct: 297 KAGYSWIVSVNNALIDMYSRCGNVPMARLVFEGMQE---KRCIVSWTSMIAGLAMHGQGE 353
Query: 397 KVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD-NQCPPDDTTYTIM 455
+ + + + + + ++L AC+ A + E E F MK P+ Y M
Sbjct: 354 EAVRLFNEMTAYGVTPDGISFISLLHACSHAGLIEEGEDYFSEMKRVYHIEPEIEHYGCM 413
Query: 456 IEAYRKEGMNDKIY 469
++ Y + G K Y
Sbjct: 414 VDLYGRSGKLQKAY 427
>AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:1258581-1260265 FORWARD
LENGTH=532
Length = 532
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 122/278 (43%), Gaps = 9/278 (3%)
Query: 191 NEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGK 250
++M+ H C ++L+ V D E L+E M + + + N +LS Y
Sbjct: 157 DQMRGHAAC-------TSLLHSYVQNKLSDKAEALFEKMGECGFLKSCLPYNHMLSMYIS 209
Query: 251 AGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
G+F+++ ++ + TS PD+ T N ++ F + ++ EK Y K + + P+
Sbjct: 210 RGQFEKVPVLIKELKIRTS--PDIVTYNLWLTAFASGNDVEGAEKVYLKAKEEKLNPDWV 267
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
T+++L Y K +K ++ M KL Y ++I ++GD + T+ ++
Sbjct: 268 TYSVLTNLYAKTDNVEKARLALKEMEKLVSKKNRVAYASLISLHANLGDKDGVNLTWKKV 327
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
++ K + + +I+ G F + E + N +L+ +++
Sbjct: 328 KSSFKKMNDAEYLSMISAVVKLGEFEQAKGLYDEWESVSGTGDARIPNLILAEYMNRDEV 387
Query: 431 MEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKI 468
+ E+ ++R+ + P +T+ I+ AY K +K+
Sbjct: 388 LLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKV 425
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 119/270 (44%), Gaps = 13/270 (4%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A +++ EE +P TY+ L Y +++ +++A L EM+ + + + Y++LI
Sbjct: 250 AEKVYLKAKEEKLNPDWVTYSVLTNLYAKTDNVEKARLALKEMEK-LVSKKNRVAYASLI 308
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ D V L ++ + + N ++S K G+F+Q K L ES S
Sbjct: 309 SLHANLGDKDGVNLTWKKVKSSFKKMNDAEYLSMISAVVKLGEFEQA-KGLYDEWESVSG 367
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK----RMYD 326
D N I++ + N ++ + EK+YE+ GI P T+ IL AY K+ ++ D
Sbjct: 368 TGDARIPNLILAEYMNRDEVLLGEKFYERIVEKGINPSYSTWEILTWAYLKRKDMEKVLD 427
Query: 327 KMSTVMEYMRKLQFPWTTST--YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
++ ++K WT + + + G+ K E ++ G +++ +
Sbjct: 428 CFGKAIDSVKK----WTVNVRLVKGACKELEEQGNVKGAEKLMTLLQKAGY-VNTQLYNS 482
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENT 414
L+ +A AG ++ + E+ E T
Sbjct: 483 LLRTYAKAGEMALIVEERMAKDNVELDEET 512
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/299 (19%), Positives = 134/299 (44%), Gaps = 16/299 (5%)
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLC---QPDVFTYSTLIKPCVDAFKFDLV 222
S + ++++++ R+ LL++A + +M LC PDV T+ L+K CV F +
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKM----LCFGVSPDVSTFPCLVKACVALKNFKGI 157
Query: 223 ELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
+ L + +++ + N + ++ Y + GK D K+ +L+ D N +++
Sbjct: 158 DFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK-----DCVIWNVMLN 212
Query: 283 VFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPW 342
+ G +D + K + R I P TF+ ++ K + D + + +
Sbjct: 213 GYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDF 272
Query: 343 TTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
S N+++ ++ G + F M +AD+ T+ C+I+G+ +GL + ++
Sbjct: 273 EGSIKNSLLSMYSKCGRFDDASKLFRMMS----RADTVTWNCMISGYVQSGLMEESLTFF 328
Query: 403 QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ + ++++L + +K E+L +++ + + D + +I+AY K
Sbjct: 329 YEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFK 387
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/242 (21%), Positives = 105/242 (43%), Gaps = 18/242 (7%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A E+F+ L + ++ +I +S P A +F M G + +A L
Sbjct: 495 AYEIFERLSKRDIV-----SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAAL 549
Query: 175 AAYCRSNLLDEAF--SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
+A +NL E+F +I M H L DV++ STLI +++ M +
Sbjct: 550 SAC--ANLPSESFGKAIHGFMIKHSL-ASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK 606
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
N V+ N +++ G GK + M+E + +PD T IIS ++G +D
Sbjct: 607 ----NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDE 662
Query: 293 MEKWYEKF-RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+++ ++GI+P+ + ++ +G+ +++ E ++ + FP + ++
Sbjct: 663 GVRFFRSMTEDYGIQPQQEHYACVVDLFGRA---GRLTEAYETVKSMPFPPDAGVWGTLL 719
Query: 352 EA 353
A
Sbjct: 720 GA 721
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 4/163 (2%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P +Y LI + GQ + A +L M+ +G P +YT LL + CR L EA+ +
Sbjct: 223 PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKL 282
Query: 190 LNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L MK C PD+ Y+T+I C + D ++L +DM + PN+V+ ++ G
Sbjct: 283 LCRMKLKG-CNPDLVHYNTMILGFCREDRAMDARKVL-DDMLSNGCSPNSVSYRTLIGGL 340
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
G FD+ +K L M+ S P N ++ F + G+++
Sbjct: 341 CDQGMFDEGKKYLEEMI-SKGFSPHFSVSNCLVKGFCSFGKVE 382
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/322 (21%), Positives = 134/322 (41%), Gaps = 2/322 (0%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ L F + E +F + L VL+ G +A +LF + G P+ +Y L
Sbjct: 137 KVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSSRLHGVMPNTRSYNLL 196
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ A+C ++ L A+ + +M + PDV +Y LI+ + + L +DM +
Sbjct: 197 MQAFCLNDDLSIAYQLFGKMLERDVV-PDVDSYKILIQGFCRKGQVNGAMELLDDMLNKG 255
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+P+ ++ +L+ + + + K+L M + C PD+ NT+I F +
Sbjct: 256 FVPDRLSYTTLLNSLCRKTQLREAYKLLCRM-KLKGCNPDLVHYNTMILGFCREDRAMDA 314
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
K + + G P + ++ LIG + M+D+ +E M F S N +++
Sbjct: 315 RKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKG 374
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
F G + + + G S T+ +I N K+ ++ A K EI +
Sbjct: 375 FCSFGKVEEACDVVEVVMKNGETLHSDTWEMVIPLICNEDESEKIKLFLEDAVKEEITGD 434
Query: 414 TTFYNAVLSACTKAEDLMEMER 435
T + + + ++M+R
Sbjct: 435 TRIVDVGIGLGSYLSSKLQMKR 456
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/284 (19%), Positives = 109/284 (38%), Gaps = 3/284 (1%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
L A E+FD + + +++ LI+ LG+ + + G + E +T
Sbjct: 65 LLAKEIFDYASQQPNFRHSRSSHLILILKLGRGRYFNLIDDVLAKHRSSGYPLTGEIFTY 124
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLC-QPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
L+ Y + L ++ S +M QP + + E L++
Sbjct: 125 LIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFE-LFKSSRL 183
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
+MPNT + N+++ + ++ MLE PDV + +I F GQ++
Sbjct: 184 HGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVV-PDVDSYKILIQGFCRKGQVN 242
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+ + N G P+ ++ L+ + +K + ++ M+ YN +I
Sbjct: 243 GAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMI 302
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLF 395
F A + D M + G +S ++ LI G + G+F
Sbjct: 303 LGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMF 346
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 97/235 (41%), Gaps = 20/235 (8%)
Query: 258 EKVLSS---MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF---RNFGIEPETRT 311
EKVLS+ MLE + P +N I+ V + ++K +E F R G+ P TR+
Sbjct: 136 EKVLSTFYKMLE-FNFTPQPKHLNRILDVL--VSHRGYLQKAFELFKSSRLHGVMPNTRS 192
Query: 312 FNILIGAYGKKRMYDKMSTVMEYMRKL---QFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
+N+L+ A+ + D +S + K+ +Y +I+ F G D
Sbjct: 193 YNLLMQAFC---LNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQVNGAMELLD 249
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
M +G D ++ L+N + + + + YN ++ + +
Sbjct: 250 DMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTMILGFCRED 309
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK-IYYLEQEKKTMITDG 482
M+ +V M N C P+ +Y +I +GM D+ YLE+ MI+ G
Sbjct: 310 RAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEE----MISKG 360
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 5/277 (1%)
Query: 205 TYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
TYS L+ V KF V+ + M + ++ + ++ D++ ++ + +
Sbjct: 91 TYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMFNLI 150
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKW--YEKFRNFGIEPETRTFNILIGAYGKK 322
KP + ++T +++ + G++++ K Y K N G++P T FNIL+ + K
Sbjct: 151 QVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAK-HNLGLQPNTCIFNILVKHHCKN 209
Query: 323 RMYDKMSTVMEYMRKLQFPWTTS-TYNNVIEA-FTDVGDAKNMEYTFDQMRAEGMKADSK 380
+ V+E M++ + S TY+ +++ F + +E D + EG+ D
Sbjct: 210 GDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPV 269
Query: 381 TFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
TF +INGF AG + + +K N Y+A+++ K + E ++ F +
Sbjct: 270 TFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEV 329
Query: 441 KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKT 477
K D YT ++ + + G D+ L E K
Sbjct: 330 KKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKA 366
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/355 (18%), Positives = 137/355 (38%), Gaps = 37/355 (10%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
L++F+ + + TY L+ L + + + M E C + L+
Sbjct: 72 VLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLM 131
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLV-ELLYEDMAARS 233
+ RS+L D+ + N ++ +P + ST + +D+ + +L +LL
Sbjct: 132 RHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLG 191
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS-VFGNMGQIDM 292
+ PNT NI++ + K G + V+ M S P+ T +T++ +F + +
Sbjct: 192 LQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEA 251
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+E + + GI P+ TFN++I
Sbjct: 252 VELFEDMISKEGISPDPVTFNVMI-----------------------------------N 276
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
F G+ + + D M+ G + + L+NGF G + T +K +
Sbjct: 277 GFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKL 336
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+T Y +++ + + E ++ MK ++C D TY +++ EG +++
Sbjct: 337 DTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEE 391
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/344 (18%), Positives = 134/344 (38%), Gaps = 36/344 (10%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE-GCDPSPETYTA 172
+ +E+F++++ + +P + LL SG+ + +R+L G P+ +
Sbjct: 142 KVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNI 201
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ +C++ ++ AF ++ EMK + P+ TYSTL+ + L+EDM ++
Sbjct: 202 LVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISK 261
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
E S PD T N +I+ F G+++
Sbjct: 262 ---------------------------------EGIS--PDPVTFNVMINGFCRAGEVER 286
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+K + + G P ++ L+ + K + + ++K T Y ++
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
F G+ +M+A +AD+ T+ ++ G ++ G + + + +
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
N Y +L+A +L + + M + P T+ ++
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 131/326 (40%), Gaps = 15/326 (4%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LI G+ G+ AR++F + + G Y +++ Y R DE + ++M
Sbjct: 56 LIASCGRIGEISYARKVFDELPQRGVS----VYNSMIVVYSRGKNPDEVLRLYDQMIAEK 111
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+ QPD T++ IK C+ + E ++ + + VL+ Y K GK D+
Sbjct: 112 I-QPDSSTFTMTIKACLSGLVLEKGEAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEA 170
Query: 258 EKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIG 317
E + M K DV T+++ F G+ ++Y + +N G + L+
Sbjct: 171 EVLFGKM-----AKRDVICWTTMVTGFAQAGKSLKAVEFYREMQNEGFGRDRVVMLGLLQ 225
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
A G +V Y+ + P ++++ + VG + F +M M
Sbjct: 226 ASGDLGDTKMGRSVHGYLYRTGLPMNVVVETSLVDMYAKVGFIEVASRVFSRM----MFK 281
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
+ ++ LI+GFA GL +K V + + VL AC++ L + R+
Sbjct: 282 TAVSWGSLISGFAQNGLANKAFEAVVEMQSLGFQPDLVTLVGVLVACSQVGSL-KTGRLV 340
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ D T T +++ Y K G
Sbjct: 341 HCYILKRHVLDRVTATALMDMYSKCG 366
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 147/349 (42%), Gaps = 19/349 (5%)
Query: 121 MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRS 180
+LK +P+ G + L+ L + G A ++F M + P ++ ++A +C++
Sbjct: 273 ILKTCYVLDPRVG--VGLLQLYTQLGDMSDAFKVFNEMPKNDVVP----WSFMIARFCQN 326
Query: 181 NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVT 240
+EA + M+ P+ FT S+++ C L E L+ + +
Sbjct: 327 GFCNEAVDLFIRMR-EAFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYV 385
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID-MMEKWYEK 299
N ++ Y K K D K+ + + S K +V + NT+I + N+G+ + E
Sbjct: 386 SNALIDVYAKCEKMDTAVKLFAEL----SSKNEV-SWNTVIVGYENLGEGGKAFSMFREA 440
Query: 300 FRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGD 359
RN + TF+ +GA D V K + N++I+ + GD
Sbjct: 441 LRN-QVSVTEVTFSSALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGD 499
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNA 419
K + F++M D ++ LI+G++ GL + + + + + + N +
Sbjct: 500 IKFAQSVFNEMET----IDVASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLG 555
Query: 420 VLSACTKAEDLMEMERVFKRM-KDNQCPPDDTTYTIMIEAYRKEGMNDK 467
VLS C+ A + + + F+ M +D+ P YT M+ + G DK
Sbjct: 556 VLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGRSGQLDK 604
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 120/298 (40%), Gaps = 18/298 (6%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P T+ L + P +A +L MIE G P TY A + +C++ ++DEA
Sbjct: 265 KPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAAD 324
Query: 189 ILNEM--KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE---DMAARSIMPNTVTQNI 243
+ + M K + P T++ +I V K D E +E M + +P+ T
Sbjct: 325 LFDFMITKGSAVSAPTAKTFALMI---VALAKNDKAEECFELIGRMISTGCLPDVSTYKD 381
Query: 244 VLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
V+ G A K D+ K L M + PD+ T N + V + D K Y +
Sbjct: 382 VIEGMCMAEKVDEAYKFLDEM-SNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVES 440
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
P +T+N+LI + + D M K TY +I D AK
Sbjct: 441 RCAPSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 500
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAG---LFHKVISTVQ------LAEKFEIAE 412
+ +++ +G+K + F + + G HKV ++ +A +F ++E
Sbjct: 501 CFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKFYNHSMARRFALSE 558
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 99/229 (43%), Gaps = 8/229 (3%)
Query: 114 QALEVFDML--KEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
+A ++FD + K + P T+ +IV L K+ + +L MI GC P TY
Sbjct: 321 EAADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYK 380
Query: 172 ALLAAYCRSNLLDEAFSILNEMKN--HPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
++ C + +DEA+ L+EM N +P PD+ TY+ ++ + K D LY M
Sbjct: 381 DVIEGMCMAEKVDEAYKFLDEMSNKGYP---PDIVTYNCFLRVLCENRKTDEALKLYGRM 437
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
P+ T N+++S + + D + M + C DV T +I+ + +
Sbjct: 438 VESRCAPSVQTYNMLISMFFEMDDPDGAFNTWTEM-DKRDCVQDVETYCAMINGLFDCHR 496
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKL 338
E+ N G++ R F+ + + + V E+M+K
Sbjct: 497 AKEACFLLEEVVNKGLKLPYRVFDSFLMRLSEVGNLKAIHKVSEHMKKF 545
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 147/341 (43%), Gaps = 22/341 (6%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
YE LI + K G+ AR++F+ + E+ + A+++ Y ++ DEA
Sbjct: 148 YESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQ----DLVVFNAMISGYANNSQADEAL 203
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+++ +MK + +PDV T++ LI + V + E M P+ V+ ++SG
Sbjct: 204 NLVKDMKLLGI-KPDVITWNALISGFSHMRNEEKVSEILELMCLDGYKPDVVSWTSIISG 262
Query: 248 ----YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF 303
+ FD +++L+ L P+ T+ T++ + + ++ +
Sbjct: 263 LVHNFQNEKAFDAFKQMLTHGL-----YPNSATIITLLPACTTLAYMKHGKEIHGYSVVT 317
Query: 304 GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
G+E + L+ YGK +S M RK TT T+N++I + + G A
Sbjct: 318 GLEDHGFVRSALLDMYGKCGF---ISEAMILFRKTP-KKTTVTFNSMIFCYANHGLADKA 373
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE-KFEIAENTTFYNAVLS 422
FDQM A G K D TF ++ ++AGL + L + K+ I Y ++
Sbjct: 374 VELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRIVPRLEHYACMVD 433
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+A L+E + K M+ PD + ++ A R G
Sbjct: 434 LLGRAGKLVEAYEMIKAMR---MEPDLFVWGALLAACRNHG 471
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/350 (18%), Positives = 147/350 (42%), Gaps = 15/350 (4%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P E TY +++ G + + M++ G + + + T+LL Y R +L+D++
Sbjct: 264 QPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLLTMYLRCSLVDDSLR 323
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ ++ P+ ++++LI V + ++ + + M SI PN+ T + L G
Sbjct: 324 VFKCIE-----YPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSALRGC 378
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
F++ ++ ++ D + + +I ++G G DM ++ E +
Sbjct: 379 SNLAMFEEGRQI-HGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLS----EVD 433
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
+ N +I +Y + + + E M L T +V+ A + + FD
Sbjct: 434 VISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFD 493
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
R + + + + C+++ AG + ++ I + + +LSAC
Sbjct: 494 SFRKDKIMLTNDHYACMVDLLGRAGRLEE----AEMLTTEVINPDLVLWRTLLSACKVHR 549
Query: 429 DLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTM 478
+ ER+ +++ + + P D+ T +M Y G +++ ++ + K M
Sbjct: 550 KVEMAERITRKILEIE-PGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 150/370 (40%), Gaps = 47/370 (12%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P T+ ++ KS +Q+ +++ GCD +T+L++ Y ++ L++A +
Sbjct: 132 PNSYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKV 191
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
++ + DV +Y+ LIK + + L++++ + + V+ N ++SGY
Sbjct: 192 FDKSPHR-----DVVSYTALIKGYASRGYIENAQKLFDEIPVKDV----VSWNAMISGYA 242
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
+ G + + ++ M++ T+ +PD TM T++S G I++ + + + G
Sbjct: 243 ETGNYKEALELFKDMMK-TNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNL 301
Query: 310 RTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQ 369
+ N LI Y K ++ T +L + S +N +I +T + K F +
Sbjct: 302 KIVNALIDLYSK---CGELETACGLFERLPYKDVIS-WNTLIGGYTHMNLYKEALLLFQE 357
Query: 370 MRAEGMKADSKTFCCLINGFANAGL------FHKVI---------------STVQLAEKF 408
M G + T ++ A+ G H I S + + K
Sbjct: 358 MLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC 417
Query: 409 -EIAENTTFYNAVLSACTKAEDLMEME-----------RVFKRMKDNQCPPDDTTYTIMI 456
+I +N++L + + M +F RM+ PDD T+ ++
Sbjct: 418 GDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLL 477
Query: 457 EAYRKEGMND 466
A GM D
Sbjct: 478 SACSHSGMLD 487
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 152/353 (43%), Gaps = 56/353 (15%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A ++F ++ E F ++ +I ++ + ++A LF M E+ ++T +
Sbjct: 251 EADQLFQVMPERDF-----ASWNTMITGFIRNREMNKACGLFDRMPEKNVI----SWTTM 301
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ Y + +EA ++ ++M +P+V TY +++ C D + +++ ++
Sbjct: 302 ITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSV 361
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
N + + +L+ Y K+G+ K+ + L C+ D+ + N++I+V+ + G
Sbjct: 362 HQKNEIVTSALLNMYSKSGELIAARKMFDNGL---VCQRDLISWNSMIAVYAHHG----- 413
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKK--RMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+GK+ MY++M RK F + TY N++
Sbjct: 414 -------------------------HGKEAIEMYNQM-------RKHGFKPSAVTYLNLL 441
Query: 352 EAFTDVGDA-KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEI 410
A + G K ME+ D +R E + + + CL++ AG V + + +
Sbjct: 442 FACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFINCDDA--- 498
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
+ +FY A+LSAC ++ + V K++ + D TY +M Y G
Sbjct: 499 RLSRSFYGAILSACNVHNEVSIAKEVVKKVLETG-SDDAGTYVLMSNIYAANG 550
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/380 (17%), Positives = 162/380 (42%), Gaps = 55/380 (14%)
Query: 114 QALEVFDMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYT 171
+++++F++++ S P+ LI L K G+ AR+LF + E T+T
Sbjct: 26 RSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDV----VTWT 81
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
++ Y + + EA + + + + + +V T++ ++ + + + + E+L+++M
Sbjct: 82 HVITGYIKLGDMREARELFDRVDS----RKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPE 137
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
R N V+ N ++ GY ++G+ D+ ++ M E ++ + N+++ G+ID
Sbjct: 138 R----NVVSWNTMIDGYAQSGRIDKALELFDEMPER-----NIVSWNSMVKALVQRGRID 188
Query: 292 MMEKWYEKF-------------------------RNFGIEPETR--TFNILIGAYGKKRM 324
+E+ R F PE ++N +I Y +
Sbjct: 189 EAMNLFERMPRRDVVSWTAMVDGLAKNGKVDEARRLFDCMPERNIISWNAMITGYAQNNR 248
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
D+ + + M + F +++N +I F + FD+M + + ++
Sbjct: 249 IDEADQLFQVMPERDF----ASWNTMITGFIRNREMNKACGLFDRMPEKNVI----SWTT 300
Query: 385 LINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
+I G+ + ++ ++ + N Y ++LSAC+ L+E +++ + + +
Sbjct: 301 MITGYVENKENEEALNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKS 360
Query: 444 QCPPDDTTYTIMIEAYRKEG 463
++ + ++ Y K G
Sbjct: 361 VHQKNEIVTSALLNMYSKSG 380
>AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr5:26952352-26955480 FORWARD LENGTH=798
Length = 798
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 162/418 (38%), Gaps = 74/418 (17%)
Query: 100 TED----LSERIEKKQ-WLQALEVFDMLKEHSFYEPKEG-------TYMKLIVLLGKSGQ 147
TED + +R+ +KQ W QA V H Y K+ Y KL+ +LG + +
Sbjct: 216 TEDQMLKIVDRLGRKQSWKQASAVV-----HWVYSDKKRKHLRSRFVYTKLLSVLGFARR 270
Query: 148 PHRARQLFTTMI-EEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP--------- 197
P A Q+F M+ + P Y + ++ LL E ++ M+ P
Sbjct: 271 PQEALQIFNQMLGDRQLYPDMAAYHCIAVTLGQAGLLKELLKVIERMRQKPTKLTKNLRQ 330
Query: 198 -----LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
+ +PD+ Y+ ++ CV ++ V ++ ++ + PN T + + ++G
Sbjct: 331 KNWDPVLEPDLVVYNAILNACVPTLQWKAVSWVFVELRKNGLRPNGATYGLAMEVMLESG 390
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
KFD++ M +S+ P T ++ G+I E+ E R+ +
Sbjct: 391 KFDRVHDFFRKM-KSSGEAPKAITYKVLVRALWREGKI---EEAVEAVRDMEQK------ 440
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
G G +Y +++ + +A +VG K R
Sbjct: 441 ----GVIGTGSVYYELACCL------------CNNGRWCDAMLEVGRMK---------RL 475
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
E + TF LI N G ++ Q K + N N +L + + E
Sbjct: 476 ENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM-KDKCDPNIGTANMMLKVYGRNDMFSE 534
Query: 433 MERVFKRM---KDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQ 487
+ +F+ + K+ P++ TY+ M+EA + + + Y E +TM+ G ++ Q
Sbjct: 535 AKELFEEIVSRKETHLVPNEYTYSFMLEASAR---SLQWEYFEHVYQTMVLSGYQMDQ 589
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/308 (19%), Positives = 120/308 (38%), Gaps = 10/308 (3%)
Query: 111 QWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETY 170
QW VF L+++ P TY + ++ +SG+ R F M G P TY
Sbjct: 356 QWKAVSWVFVELRKNGL-RPNGATYGLAMEVMLESGKFDRVHDFFRKMKSSGEAPKAITY 414
Query: 171 TALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
L+ A R ++EA + +M+ + Y C + D + +
Sbjct: 415 KVLVRALWREGKIEEAVEAVRDMEQKGVIGTGSVYYELACCLCNNGRWCDAMLEVGRMKR 474
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
+ P +T +++ G D + M C P++ T N ++ V+G
Sbjct: 475 LENCRPLEITFTGLIAASLNGGHVDDCMAIFQYM--KDKCDPNIGTANMMLKVYGRNDMF 532
Query: 291 DMMEKWYEKF---RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
++ +E+ + + P T++ ++ A + ++ V + M + + +
Sbjct: 533 SEAKELFEEIVSRKETHLVPNEYTYSFMLEASARSLQWEYFEHVYQTMVLSGYQMDQTKH 592
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHK---VISTVQL 404
+++ + G +E+ FD + +G F L+ G F + +I+TV L
Sbjct: 593 ASMLIEASRAGKWSLLEHAFDAVLEDGEIPHPLFFTELLCHATAKGDFQRAITLINTVAL 652
Query: 405 AEKFEIAE 412
A F+I+E
Sbjct: 653 A-SFQISE 659
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 118/303 (38%), Gaps = 13/303 (4%)
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
+ L+ Y AFS+ EM+ L +PD TY LIK L E ++ +
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
QN +L Y G KV M E D+ N++I+ F G+
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEK-----DLVAWNSVINGFAENGK 202
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
+ Y + + GI+P+ T L+ A K V YM K+ + N
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE 409
+++ + G + + FD+M + +S ++ LI G A G + I + E E
Sbjct: 263 LLDLYARCGRVEEAKTLFDEM----VDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 410 --IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN-QCPPDDTTYTIMIEAYRKEGMND 466
+ TF +L AC+ + E F+RM++ + P + M++ + G
Sbjct: 319 GLLPCEITFV-GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVK 377
Query: 467 KIY 469
K Y
Sbjct: 378 KAY 380
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 61/299 (20%), Positives = 122/299 (40%), Gaps = 2/299 (0%)
Query: 161 EGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFD 220
E +P + L+ Y + L+ F + + + V T +TLI + D
Sbjct: 158 EISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGF-TLSVITLNTLIHYSSKSKIDD 216
Query: 221 LVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTI 280
LV +YE + I PN +T I++ K G+ ++ +L + C P V ++
Sbjct: 217 LVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRIC-GKRCLPSVIVNTSL 275
Query: 281 ISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF 340
+ +I+ ++ + +T ++I++ A K+ V + M + F
Sbjct: 276 VFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGF 335
Query: 341 PWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIS 400
+ Y + + GD K E +M G+ +TF CLI GFA G K +
Sbjct: 336 SANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWEEKGLE 395
Query: 401 TVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAY 459
++ + + + +N ++ + +K E++ + + D PD+ TY+ +I +
Sbjct: 396 YCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGF 454
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 127/315 (40%), Gaps = 10/315 (3%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P E T +I +L K G+ L + + C PS T+L+ ++E+ S+
Sbjct: 232 PNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIEESMSL 291
Query: 190 LNE--MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL--LYEDMAARSIMPNTVTQNIVL 245
L MKN + D YS ++ A + DLV ++++M R N+ + +
Sbjct: 292 LKRLLMKNMVV---DTIGYSIVVYA--KAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 246 SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGI 305
+ G + E++LS M E + P T N +I F G + ++ E G+
Sbjct: 347 RVCCEKGDVKEAERLLSEM-EESGVSPYDETFNCLIGGFARFGWEEKGLEYCEVMVTRGL 405
Query: 306 EPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEY 365
P FN ++ + K ++ + ++ F TY+++I F + D
Sbjct: 406 MPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHLIRGFIEGNDIDQALK 465
Query: 366 TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
F +M M + F LI G G +++ +K I N Y+A++ A
Sbjct: 466 LFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLIEPNADIYDALIKAFQ 525
Query: 426 KAEDLMEMERVFKRM 440
K D +RV+ M
Sbjct: 526 KIGDKTNADRVYNEM 540
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/295 (19%), Positives = 119/295 (40%), Gaps = 4/295 (1%)
Query: 110 KQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
K+W A F+ + Y Y + +L ++ Q + L ++ C SP
Sbjct: 84 KRWGLAYLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGA 143
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC--VDAFKFDLVELLYE 227
+ + + L+DEA S+ + ++ LC P+ +TY+ L++ ++ +LVE +
Sbjct: 144 FGFFIRCLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLK 203
Query: 228 DMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNM 287
+M + T VL Y GK ++ V + +L + T+ ++ F
Sbjct: 204 EMRDCGFHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTI--LVVSFCKW 261
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTY 347
GQ+D + E I +T+ +LI + K+ DK + E MR++ + Y
Sbjct: 262 GQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALY 321
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV 402
+ +I D + + +++ G+ D L+ F+ ++ +
Sbjct: 322 DVLIGGLCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVI 376
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 88/415 (21%), Positives = 156/415 (37%), Gaps = 74/415 (17%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A E+ +ML+E TY LI K + +A QLF M G + Y L
Sbjct: 266 KAFELIEMLEERDI-RLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVL 324
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPD------------------------------- 202
+ C+ L+ A S+ E+K + PD
Sbjct: 325 IGGLCKHKDLEMALSLYLEIKRSGI-PPDRGILGKLLCSFSEESELSRITEVIIGDIDKK 383
Query: 203 --VFTYSTLIKPCV------DAFKF--------------DLVELLYEDMAARSIMPNTVT 240
+ Y +L + + +A+ F ++V+LL + ++I+P++ +
Sbjct: 384 SVMLLYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDH--NKAILPDSDS 441
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF 300
+IV++ KA K D +L ++++ P N II G+ + K +
Sbjct: 442 LSIVINCLVKANKVDMAVTLLHDIVQN-GLIPGPMMYNNIIEGMCKEGRSEESLKLLGEM 500
Query: 301 RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQF-PWTTSTYNNVIEAFTDVGD 359
++ G+EP T N + G ++ + +++ MR F PW T +++ + G
Sbjct: 501 KDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHT-TFLVKKLCENGR 559
Query: 360 AKNMEYTFDQMRAEGMKADSKTFCCLINGFA-NAG------LFHKVISTVQLAEKFEIAE 412
A + D + EG I+G N G LF + +
Sbjct: 560 AVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGH-------CP 612
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK 467
+ Y+ ++ A KA ME + +F M P TY MI+ + KEG D+
Sbjct: 613 DVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDR 667
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/217 (17%), Positives = 86/217 (39%), Gaps = 5/217 (2%)
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFG--NMGQIDMMEKWYEKFRNFGIE 306
G AG D+ V + E C P+ +T N ++ N ++++E ++ R+ G
Sbjct: 152 GNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFH 211
Query: 307 PETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNV-IEAFTDVGDAKNMEY 365
+ T ++ Y ++ +V + L W + + + +F G
Sbjct: 212 FDKFTLTPVLQVYCNTGKSERALSVFNEI--LSRGWLDEHISTILVVSFCKWGQVDKAFE 269
Query: 366 TFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACT 425
+ + ++ + KT+C LI+GF K + + + + Y+ ++
Sbjct: 270 LIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 426 KAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKE 462
K +DL ++ +K + PPD ++ ++ +E
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEE 366
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 88/190 (46%), Gaps = 14/190 (7%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFY--EP--KEGTYMKLIVLLGKSGQPHRA 151
+N + L+ER + ++ AL D+LK+ FY EP K T+ L+ L ++G+ A
Sbjct: 512 LNCIYGCLAERCD---FVGAL---DLLKKMRFYGFEPWIKHTTF--LVKKLCENGRAVDA 563
Query: 152 RQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIK 211
+ + EG TA + ++ +D + ++ + C PDV Y LIK
Sbjct: 564 CKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIK 622
Query: 212 PCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCK 271
A + ++L+ +M ++ + P T N ++ G+ K G+ D+ + M E
Sbjct: 623 ALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEK-N 681
Query: 272 PDVWTMNTII 281
PDV T ++I
Sbjct: 682 PDVITYTSLI 691
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/312 (18%), Positives = 128/312 (41%), Gaps = 4/312 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y +I + K G+ + +L M + G +PS T + A +
Sbjct: 472 PGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDL 531
Query: 190 LNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
L +M+ + +P + + L+K C + D + L +D+A + + V + G
Sbjct: 532 LKKMRFYGF-EPWIKHTTFLVKKLCENGRAVDACKYL-DDVAGEGFLGHMVASTAAIDGL 589
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
K D+ ++ + + C PDV + +I + + + + + G++P
Sbjct: 590 IKNEGVDRGLELFRDICANGHC-PDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPT 648
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+N +I + K+ D+ + + M + + TY ++I G + ++
Sbjct: 649 VATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWN 708
Query: 369 QMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAE 428
+M+ + + TF LI G G + + + E+ E+ ++ Y +++S+ +E
Sbjct: 709 EMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSE 768
Query: 429 DLMEMERVFKRM 440
++ +F+ M
Sbjct: 769 NINAGFGIFREM 780
>AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8926110-8927722 FORWARD
LENGTH=490
Length = 490
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 127/318 (39%), Gaps = 20/318 (6%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
AL++ D + EH +E EG + L+ K G A + F T+ E + Y AL
Sbjct: 88 HALQISDWMSEHRVHEISEGDVAIRLDLIAKVGGLGEAEKFFETIPME--RRNYHLYGAL 145
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPL---CQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
L Y +L +A + EMK C P Y+ ++ V K+ +VE L +M
Sbjct: 146 LNCYASKKVLHKAEQVFQEMKELGFLKGCLP----YNVMLNLYVRTGKYTMVEKLLREME 201
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW-----TMNTIISVFG 285
++ P+ T N L Y + MEK L D W T N I
Sbjct: 202 DETVKPDIFTVNTRLHAYSVVSDVEGMEKFLMRCEADQGLHLD-WRTYADTANGYIKAGL 260
Query: 286 NMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS 345
++M+ K E+ N + + +L+ YG +++ + ++L + T
Sbjct: 261 TEKALEMLRK-SEQMVN--AQKRKHAYEVLMSFYGAAGKKEEVYRLWSLYKELDGFYNTG 317
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-L 404
Y +VI A + D + +E ++ A D + LI G+ G+ K V L
Sbjct: 318 -YISVISALLKMDDIEEVEKIMEEWEAGHSLFDIRIPHLLITGYCKKGMMEKAEEVVNIL 376
Query: 405 AEKFEIAENTTFYNAVLS 422
+K+ + + +T+ L
Sbjct: 377 VQKWRVEDTSTWERLALG 394
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 142/357 (39%), Gaps = 50/357 (14%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LI++ K GQ AR+LF + E ++ ++++ Y + +A + +M+
Sbjct: 173 LIMMYAKCGQVGYARKLFDEITER----DTVSWNSMISGYSEAGYAKDAMDLFRKMEEEG 228
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
+PD T +++ C LL E + I +T + ++S YGK G D
Sbjct: 229 F-EPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSA 287
Query: 258 EKVLSSML------------------------------ESTSCKPDVWTMNTIISVFGNM 287
+V + M+ E T PD T++T++S G++
Sbjct: 288 RRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSACGSV 347
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ-FPWTT-S 345
G +++ ++ ++ NI + A G MY K V E +R + P +
Sbjct: 348 GALELGKQIETHASELSLQH-----NIYV-ATGLVDMYGKCGRVEEALRVFEAMPVKNEA 401
Query: 346 TYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QL 404
T+N +I A+ G AK FD+M + TF +++ +AGL H+ ++
Sbjct: 402 TWNAMITAYAHQGHAKEALLLFDRM---SVPPSDITFIGVLSACVHAGLVHQGCRYFHEM 458
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+ F + Y ++ ++A L E +R PD+ ++ A K
Sbjct: 459 SSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERFPGK---PDEIMLAAILGACHK 512
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 106/256 (41%), Gaps = 16/256 (6%)
Query: 236 PNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
PN + N ++ G + L ++ + KPD +T N + + +I +
Sbjct: 94 PNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRS 153
Query: 296 WYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT---TSTYNNVIE 352
+ G+E + + LI MY K V Y RKL T T ++N++I
Sbjct: 154 VHSSLFKVGLERDVHINHSLI------MMYAKCGQV-GYARKLFDEITERDTVSWNSMIS 206
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAE 412
+++ G AK+ F +M EG + D +T ++ ++ G ++A +I
Sbjct: 207 GYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGL 266
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY--Y 470
+T + ++S K DL RVF +M D +T MI Y + G + + + +
Sbjct: 267 STFLGSKLISMYGKCGDLDSARRVFNQM----IKKDRVAWTAMITVYSQNGKSSEAFKLF 322
Query: 471 LEQEKKTMITDGIKVS 486
E EK + D +S
Sbjct: 323 FEMEKTGVSPDAGTLS 338
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/357 (21%), Positives = 145/357 (40%), Gaps = 34/357 (9%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
AL++F +++ S ++ +I L ++G A + F M +G + ++L
Sbjct: 224 ALQLFRGMEKDSV------SWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVL 277
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLC------QPDVFTYSTLIKPCVDAFKFDLVELLYED 228
A C +NE K C Q ++ S LI + +++
Sbjct: 278 PA-C------GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDR 330
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
M + N V+ ++ GYG+ G+ ++ K+ M + + PD +T+ IS N+
Sbjct: 331 MKQK----NVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGIDPDHYTLGQAISACANVS 385
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMR-KLQFPWTTSTY 347
++ +++ K G+ N L+ YGK D + + M + WT
Sbjct: 386 SLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTA--- 442
Query: 348 NNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL-AE 406
++ A+ G A FD+M G+K D T +I+ + AGL K +L
Sbjct: 443 --MVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTS 500
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
++ I + Y+ ++ +++ L E R M PPD +T ++ A R +G
Sbjct: 501 EYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMP---FPPDAIGWTTLLSACRNKG 554
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 115/285 (40%), Gaps = 49/285 (17%)
Query: 146 GQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRS-NLLDEAFSILNEMKNHPLCQPDVF 204
G R++F M D S ++TAL+ Y ++ NL EA ++ +EM +P+ F
Sbjct: 319 GSVDDCRKVFDRME----DHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHVEPNHF 374
Query: 205 TYSTLIKPCVD-------------AFKFDLVELLYEDMAARSIMP--------------- 236
T+S+ K C + AFK L A S++
Sbjct: 375 TFSSAFKACGNLSDPRVGKQVLGQAFKRGLAS---NSSVANSVISMFVKSDRMEDAQRAF 431
Query: 237 ------NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI 290
N V+ N L G + F+Q K+LS + E +T +++S N+G I
Sbjct: 432 ESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER-ELGVSAFTFASLLSGVANVGSI 490
Query: 291 DMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQ-FPWTTSTYNN 349
E+ + + G+ N LI Y K D S V +M WT+
Sbjct: 491 RKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTS----- 545
Query: 350 VIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+I F G A + TF+QM EG+K + T+ +++ ++ GL
Sbjct: 546 MITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGL 590
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
L+ + + L A S L+ M + D T+S+L+K C+ A F L +L++ +
Sbjct: 32 LILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEF 91
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG-QID 291
I P++V N ++S Y K+G + E V +M K DV + + +++ +GN G ++D
Sbjct: 92 DIEPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFG--KRDVVSWSAMMACYGNNGRELD 149
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGA 318
++ + E F G+ P + +I A
Sbjct: 150 AIKVFVE-FLELGLVPNDYCYTAVIRA 175
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 72/159 (45%), Gaps = 15/159 (9%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEG-CDPSPETYT 171
++ LE F+ + E +P E TY+ ++ G + F +M E+ P E Y
Sbjct: 557 IRVLETFNQMIEEGV-KPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYA 615
Query: 172 ALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAA 231
++ CR+ LL +AF +N M P Q DV + T + C +L +L AA
Sbjct: 616 CMVDLLCRAGLLTDAFEFINTM---PF-QADVLVWRTFLGACRVHSNTELGKL-----AA 666
Query: 232 RSIM---PNTVTQNIVLSG-YGKAGKFDQMEKVLSSMLE 266
R I+ PN I LS Y AGK+++ ++ M E
Sbjct: 667 RKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKE 705
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 139/329 (42%), Gaps = 29/329 (8%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
TY+KL G P A +F ++ P+ +YTAL++ + R NL EA + M
Sbjct: 123 TYLKL-------GFPREAILVFVSL----SSPTVVSYTALISGFSRLNLEIEALKVFFRM 171
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGK--A 251
+ L QP+ +T+ ++ CV +F L ++ + + + N ++S Y K
Sbjct: 172 RKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSG 231
Query: 252 GKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID-MMEKWYEKFRNFGIEPETR 310
D + K+ + + DV + NT++S G+ + +YE R G ++
Sbjct: 232 SSCDDVLKLFDEIPQR-----DVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSF 286
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
T + L+ + + + + ++ S N +I ++ D K +E ++ M
Sbjct: 287 TLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMM 346
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVIST-VQLAEKFEIAENTTFYNAVLSACTKAED 429
A+ D+ TF +I + + G+ + + EK NT YNA+++ +
Sbjct: 347 MAQ----DAVTFTEMITAYMSFGMVDSAVEIFANVTEK-----NTITYNALMAGFCRNGH 397
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEA 458
++ ++F M D + T ++A
Sbjct: 398 GLKALKLFTDMLQRGVELTDFSLTSAVDA 426
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 96/193 (49%), Gaps = 15/193 (7%)
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKW 296
+T NI++ G KAGKFD+ + +++L S +PDV T N +I F ++G+ EK
Sbjct: 13 DTAGYNIIIHGLCKAGKFDEAGNIFTNLLIS-GLQPDVQTYNMMIR-FSSLGR---AEKL 67
Query: 297 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD 356
Y + G+ P+T T+N +I K+ +K++ RK+ + ST+N +I +
Sbjct: 68 YAEMIRRGLVPDTITYNSMIHGLCKQ---NKLAQA----RKV--SKSCSTFNTLINGYCK 118
Query: 357 VGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQ-LAEKFEIAENTT 415
K+ F +M G+ A+ T+ LI+GF G F+ + Q + + + T
Sbjct: 119 ATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSIT 178
Query: 416 FYNAVLSACTKAE 428
F + + C++ E
Sbjct: 179 FRDILPQLCSRKE 191
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 86/230 (37%), Gaps = 52/230 (22%)
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
+F M E D Y ++ C++ DEA +I + L QPDV TY+ +I+
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGL-QPDVQTYNMMIRFS 59
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
E LY +M R ++P+T+T N ++ G K K Q KV S SC
Sbjct: 60 ----SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV------SKSCS-- 107
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKK-RMYDKMSTVM 332
TFN LI Y K R+ D M+
Sbjct: 108 -------------------------------------TFNTLINGYCKATRVKDGMNLFC 130
Query: 333 EYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
E R+ TY +I F VGD F +M + G+ + S TF
Sbjct: 131 EMYRR-GIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/302 (18%), Positives = 133/302 (44%), Gaps = 15/302 (4%)
Query: 128 YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAF 187
Y P +L++ GK AR++ M E+ + ++TA+++ Y ++ EA
Sbjct: 83 YLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK----NVVSWTAMISRYSQTGHSSEAL 138
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
++ EM +P+ FT++T++ C+ A L + ++ + + + + +L
Sbjct: 139 TVFAEMMRSD-GKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDM 197
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
Y KAG+ + ++ + E DV + II+ + +G + + + + + G+ P
Sbjct: 198 YAKAGQIKEAREIFECLPER-----DVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSP 252
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+ L+ A + D ++ + + P+ N++I+ ++ G+ F
Sbjct: 253 NYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLF 312
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLA-EKFEIAENTTFYNAVLSACTK 426
D M + + ++ ++ G++ GL +V+ +L ++ + + AVLS C+
Sbjct: 313 DNMP----ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSH 368
Query: 427 AE 428
Sbjct: 369 GR 370
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 137/312 (43%), Gaps = 43/312 (13%)
Query: 118 VFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAY 177
VF+++++ S EP + T++ I RQL ++++ TAL+ Y
Sbjct: 217 VFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMY 276
Query: 178 CRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPN 237
+ A+ + E+K+ ++ +++++I + + + L+E + + + P+
Sbjct: 277 SKCRCWKSAYIVFTELKD----TRNLISWNSVISGMMINGQHETAVELFEKLDSEGLKPD 332
Query: 238 TVTQNIVLSGYGKAGK-------FDQMEKV--------LSSMLESTSCKPDVWTMNTIIS 282
+ T N ++SG+ + GK F++M V L+S+L + S D+WT+
Sbjct: 333 SATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCLTSLLSACS---DIWTLKNGKE 389
Query: 283 VFGNM-------------GQIDM-----MEKWYEK-FRNFGIEPETRTF-NILIGAYGKK 322
+ G++ IDM + W + F F +P+ F N++I YGK
Sbjct: 390 IHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGKH 449
Query: 323 RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAE-GMKADSKT 381
+ + E +R+ + + +T+ V+ A + G+ + F M+ E G K ++
Sbjct: 450 GECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTEH 509
Query: 382 FCCLINGFANAG 393
C+I+ +G
Sbjct: 510 IGCMIDLLGRSG 521
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/321 (19%), Positives = 125/321 (38%), Gaps = 35/321 (10%)
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
L M E+ S TY A ++ + +++ S+ N M+ +P+ T+ I C
Sbjct: 182 LAARMFEKVPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITAC 241
Query: 214 VDAFKFD-------LV---ELLYEDMAARSIMP----------------------NTVTQ 241
LV E +E M +++ N ++
Sbjct: 242 ASLLNLQYGRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISW 301
Query: 242 NIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFR 301
N V+SG G+ + ++ L+S KPD T N++IS F +G++ K++E+
Sbjct: 302 NSVISGMMINGQHETAVELFEK-LDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERML 360
Query: 302 NFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAK 361
+ + P + L+ A + ++ K ++I+ + G +
Sbjct: 361 SVVMVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
Query: 362 NMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVL 421
FD R E D + +I+G+ G I +L + ++ + + AVL
Sbjct: 421 WARRIFD--RFEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVL 478
Query: 422 SACTKAEDLMEMERVFKRMKD 442
SAC+ ++ + ++F+ M++
Sbjct: 479 SACSHCGNVEKGSQIFRLMQE 499
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 87/417 (20%), Positives = 149/417 (35%), Gaps = 86/417 (20%)
Query: 119 FDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYC 178
D++ HS P + T+ L+ K G + R L +++ G T TAL++ Y
Sbjct: 21 LDVILSHS---PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYM 77
Query: 179 RSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPN 237
+ + +A +L+EM + + L C DAF+ ++ D N
Sbjct: 78 KVKQVTDALKVLDEMPERGIASVNAAVSGLLENGFCRDAFR------MFGDARVSGSGMN 131
Query: 238 TVTQNIVLSGYG-------------KAGKFDQMEKVLSSMLESTSCKPDVW--------- 275
+VT VL G G K+G +ME + + L S + W
Sbjct: 132 SVTVASVLGGCGDIEGGMQLHCLAMKSGF--EMEVYVGTSLVSMYSRCGEWVLAARMFEK 189
Query: 276 -------TMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP--------------------- 307
T N IS G ++++ + R F E
Sbjct: 190 VPHKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQY 249
Query: 308 ---------------ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
ET LI Y K R + V ++ + ++N+VI
Sbjct: 250 GRQLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTR---NLISWNSVIS 306
Query: 353 AFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF---E 409
G + F+++ +EG+K DS T+ LI+GF+ G KVI + E+
Sbjct: 307 GMMINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLG---KVIEAFKFFERMLSVV 363
Query: 410 IAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
+ + ++LSAC+ L + + + D T +I+ Y K G++
Sbjct: 364 MVPSLKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSS 420
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 139/344 (40%), Gaps = 49/344 (14%)
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC-- 213
T + + +P+ Y +++ AY ++L + I ++ PD FT+ + K C
Sbjct: 62 TRLFNQVSNPNVFLYNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCAS 121
Query: 214 -----------------------------VDAF-KFD-LVEL--LYEDMAARSIMPNTVT 240
+D + KFD LV+ ++++M R + ++
Sbjct: 122 LGSCYLGKQVHGHLCKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDV----IS 177
Query: 241 QNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF 300
N +LSGY + G+ + + + ML+ T WT +IS + +G ++ +
Sbjct: 178 WNSLLSGYARLGQMKKAKGLFHLMLDKTIVS---WT--AMISGYTGIGCYVEAMDFFREM 232
Query: 301 RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDA 360
+ GIEP+ + ++ + + + + Y + F T N +IE ++ G
Sbjct: 233 QLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVI 292
Query: 361 KNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAV 420
F QM + D ++ +I+G+A G H I T ++ ++ N + +
Sbjct: 293 SQAIQLFGQMEGK----DVISWSTMISGYAYHGNAHGAIETFNEMQRAKVKPNGITFLGL 348
Query: 421 LSACTKAEDLMEMERVFKRMK-DNQCPPDDTTYTIMIEAYRKEG 463
LSAC+ E R F M+ D Q P Y +I+ + G
Sbjct: 349 LSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDVLARAG 392
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/272 (19%), Positives = 113/272 (41%), Gaps = 16/272 (5%)
Query: 150 RARQLFTTMIEE--GCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYS 207
R ++F ++I+ C +P + L+ + S +D A ++ ++++ + + T +
Sbjct: 143 RVLKVFRSLIKSYNRCGSAPFVFDLLIKSCLDSKEIDGAVMVMRKLRSRGI-NAQISTCN 201
Query: 208 TLI-------------KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
LI K + F D V + I PN T N ++ + + G+
Sbjct: 202 ALITEVSRRRGASNGYKMYREVFGLDDVSVDEAKKMIGKIKPNATTFNSMMVSFYREGET 261
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
+ +E++ M E C P+V++ N ++ + G + EK +E+ + G+ + +N
Sbjct: 262 EMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNT 321
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
+IG K + M T TY +++ + GD + + +M+ +G
Sbjct: 322 MIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKG 381
Query: 375 MKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
+AD T L+ G + +V+ + +
Sbjct: 382 FEADGLTIEALVEGLCDDRDGQRVVEAADIVK 413
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 104/270 (38%), Gaps = 42/270 (15%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEE-GCDPSPETYTALLAAYCRSNLLDEAF 187
+P T+ ++V + G+ +++ M EE GC P+ +Y L+ AYC L+ EA
Sbjct: 242 KPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARGLMSEAE 301
Query: 188 SILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
+ EMK + D+ Y+T+I F+ + L+ DM + I +T +++G
Sbjct: 302 KVWEEMKVRGVVY-DIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGIECTCLTYEHLVNG 360
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
Y KAG D V Y + + G E
Sbjct: 361 YCKAGDVDSGLVV------------------------------------YREMKRKGFEA 384
Query: 308 ETRTFNILIGAY----GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNM 363
+ T L+ +R+ + V + +R+ F + + Y +++ + G
Sbjct: 385 DGLTIEALVEGLCDDRDGQRVVEAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRA 444
Query: 364 EYTFDQMRAEGMKADSKTFCCLINGFANAG 393
+M +G K +T+ I+G+ G
Sbjct: 445 LNIQAEMVGKGFKPSQETYRAFIDGYGIVG 474
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 17/288 (5%)
Query: 147 QPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTY 206
P LF ++E+G P T+ +LL A + L+E L+ + +V+
Sbjct: 109 NPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQ-LHCLSMKLGLDDNVYVC 167
Query: 207 STLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLE 266
TLI + D +++ R + P V N +++GY + + ++ + M +
Sbjct: 168 PTLINMYTECEDVDSARCVFD----RIVEPCVVCYNAMITGYARRNRPNEALSLFREM-Q 222
Query: 267 STSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF-RNFGIEPETRTFNILIGAYGKKRMY 325
KP+ T+ +++S +G +D+ KW K+ + + LI + K
Sbjct: 223 GKYLKPNEITLLSVLSSCALLGSLDL-GKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSL 281
Query: 326 DKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL 385
D ++ E MR T ++ +I A+ + G A+ F++MR+E ++ D TF L
Sbjct: 282 DDAVSIFEKMRYKD----TQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGL 337
Query: 386 INGFANAGLF---HKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
+N ++ G K S Q+ KF I + Y +++ ++A +L
Sbjct: 338 LNACSHTGRVEEGRKYFS--QMVSKFGIVPSIKHYGSMVDLLSRAGNL 383
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/350 (22%), Positives = 154/350 (44%), Gaps = 71/350 (20%)
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYE-- 227
+ +++ A+ ++ L EA +++ + PD +T+ ++IK C F ++ +L+YE
Sbjct: 74 WNSIIRAFSKNGLFPEALEFYGKLRESKV-SPDKYTFPSVIKACAGLFDAEMGDLVYEQI 132
Query: 228 -DMA-----------------------ARSI---MP--NTVTQNIVLSGYGKAGKFDQME 258
DM AR + MP + V+ N ++SGY G +++
Sbjct: 133 LDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEAL 192
Query: 259 KVLSSMLESTSCKPDVWTMNTIISVFGNM-----GQ-----------------IDMMEKW 296
++ L+++ PD +T+++++ FGN+ GQ + +
Sbjct: 193 EIYHE-LKNSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAM 251
Query: 297 YEKF------RNFGIEPETR---TFNILIGAYGKKRMYDKMSTVMEYMRKL-QFPWTTST 346
Y KF R E + R ++N +I Y K M ++ +V ++ L QF T
Sbjct: 252 YLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEE--SVRMFLENLDQFKPDLLT 309
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAE 406
++V+ A + D +Y ++ M G +S LI+ +A G +I+ +
Sbjct: 310 VSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNILIDVYAKCG---DMITARDVFN 366
Query: 407 KFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMI 456
E ++T +N+++S ++ DLME ++FK M + D TY ++I
Sbjct: 367 SME-CKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLMLI 415
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 88/404 (21%), Positives = 148/404 (36%), Gaps = 77/404 (19%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
LI + K G AR +F +M C + ++ ++++ Y +S L EA + M
Sbjct: 348 LIDVYAKCGDMITARDVFNSM---ECKDTV-SWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 198 LCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQM 257
Q D TY LI + L+ + I + N ++ Y K G+
Sbjct: 404 E-QADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 258 EKVLSSM------------------------------LESTSCKPDVWTMNTIISVFGNM 287
K+ SSM + + PD+ T + + ++
Sbjct: 463 LKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVTLPMCASL 522
Query: 288 GQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYM-RKLQFPWTTST 346
+ ++ + FG E E + N LI Y K + S V E M R+ WT
Sbjct: 523 AAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMI 582
Query: 347 YNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL-------FHK-- 397
Y A+ G+ + TF M G+ DS F +I +++GL F K
Sbjct: 583 Y-----AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMK 637
Query: 398 --------------VISTVQLAEKFEIAE----------NTTFYNAVLSACTKAEDLMEM 433
V+ + ++K AE + + + +VL AC + D+
Sbjct: 638 THYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETA 697
Query: 434 ERVFKRMKDNQCPPDDTTYTIMIE-AYRKEGMNDKIYYLEQEKK 476
ERV +R+ + PDD Y+I+ AY DK+ + + K
Sbjct: 698 ERVSRRII--ELNPDDPGYSILASNAYAALRKWDKVSLIRKSLK 739
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/283 (19%), Positives = 108/283 (38%), Gaps = 43/283 (15%)
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYED 228
++++++A + + EA S L EM + + P+ + + + +K C + D ++
Sbjct: 236 SWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGL 295
Query: 229 MAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMG 288
+ N + + Y + G + +V + +PD + N II+ N G
Sbjct: 296 CIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIE-----RPDTASWNVIIAGLANNG 350
Query: 289 QIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYN 348
D + + R+ G P+ + L+ A K + + Y+ K F + N
Sbjct: 351 YADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCN 410
Query: 349 NVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
+++ +T D +CC L E F
Sbjct: 411 SLLTMYTFCSD---------------------LYCCF-----------------NLFEDF 432
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
++ +N +L+AC + E +EM R+FK M ++C PD T
Sbjct: 433 RNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHIT 475
>AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11938265-11939653 REVERSE
LENGTH=462
Length = 462
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/260 (20%), Positives = 122/260 (46%), Gaps = 4/260 (1%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDP-SPETYTA 172
+ +EVF+ +K + + E T ++ L + Q AR F+ M+E G D + + T
Sbjct: 157 EVVEVFEYMKNNEV-KIDEKTCTLHLLNLKRCDQMELARDFFSLMVESGIDVVTVYSLTV 215
Query: 173 LLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAAR 232
++ C + + A ++ EM + ++ T+ ++I CV + F+ ++L+ + M
Sbjct: 216 VVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWDFEELDLVLKLMEKE 275
Query: 233 SIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDM 292
S+M + + +++ G+ GK ++ E+ L M+ + + + N I++ + G ++
Sbjct: 276 SVMLDLDSYKVLIDGFTSYGKVEEAER-LVLMMHDKKLRVESYLYNLIMNGYSRFGLVEK 334
Query: 293 MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIE 352
+ + Y + + G+ P T+ +L+ K + + + +R +F Y+ + E
Sbjct: 335 VIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNEFEIDEEMYSTLSE 394
Query: 353 AFTDVGDA-KNMEYTFDQMR 371
VG K++E + +R
Sbjct: 395 ECYRVGMIDKSLEVVAEMIR 414
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/278 (21%), Positives = 118/278 (42%), Gaps = 4/278 (1%)
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSML 265
++++I D KF V ++E M + + T + L + + + S M+
Sbjct: 142 FNSMIMVYSDNGKFSEVVEVFEYMKNNEVKIDEKTCTLHLLNLKRCDQMELARDFFSLMV 201
Query: 266 ESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNF-GIEPETRTFNILIGAYGKKRM 324
ES V+++ +++V G+I + E+ G++ TF +IG K+
Sbjct: 202 ESGIDVVTVYSLTVVVTVLCCNGEITRARELVEEMGLVKGVKANIVTFKSMIGCCVKRWD 261
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
++++ V++ M K +Y +I+ FT G + E M + ++ +S +
Sbjct: 262 FEELDLVLKLMEKESVMLDLDSYKVLIDGFTSYGKVEEAERLVLMMHDKKLRVESYLYNL 321
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQ 444
++NG++ GL KVI + N Y +++ KA + E ++ N+
Sbjct: 322 IMNGYSRFGLVEKVIELYSEMSSRGVTPNKDTYWVLMNGLCKAGKVCEAMSFLNELRVNE 381
Query: 445 CPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDG 482
D+ Y+ + E + GM DK + E MI DG
Sbjct: 382 FEIDEEMYSTLSEECYRVGMIDKSLEVVAE---MIRDG 416
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 80/184 (43%), Gaps = 1/184 (0%)
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR-TFNILIGAYGKKRMYDKMSTV 331
DV MNT +S++ + G + + K +E F G+ T T+N ++ ++ KK + V
Sbjct: 593 DVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGV 652
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
++ M + +TYN +I+ +G A D++ +G D + LIN
Sbjct: 653 LDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGK 712
Query: 392 AGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT 451
A + + I + YN ++ +KA L E + K M D C P+ T
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVT 772
Query: 452 YTIM 455
TI+
Sbjct: 773 DTIL 776
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 142/352 (40%), Gaps = 26/352 (7%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHP 197
L+ L +SG+ A + M E G +P Y ++L A + + L A SIL ++
Sbjct: 133 LLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEAS 192
Query: 198 LCQPDVFTYSTLIK---PCVDAFKFDLVELLYEDMAA------------RSIMPNTVTQN 242
D T +I P A LV L DM + + +T + N
Sbjct: 193 DNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYN 252
Query: 243 IVLSGYGKAGKFDQMEKVLSSMLESTSC-----KPDVWTMNTIISVFGNMGQI-DMMEKW 296
I + G+G G D + M E +S PD+ T N++I V G+ D + W
Sbjct: 253 ICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVW 312
Query: 297 YEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFT 355
++ + G EP+ T+ ILI G RM D M E M+ F T YN +++
Sbjct: 313 -DELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGE-MQYNGFVPDTIVYNCLLDGTL 370
Query: 356 DVGDAKNMEYTFDQMRAEGMKADSKTFCCLING-FANAGLFHKVISTVQLAEKFEIAENT 414
F++M EG++A T+ LI+G F N L +K + +
Sbjct: 371 KARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAI 430
Query: 415 TFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
TF L C + + L ++ + M+ D T + ++ + K+G D
Sbjct: 431 TFSIVGLQLCREGK-LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWD 481
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 109/257 (42%), Gaps = 7/257 (2%)
Query: 115 ALEVFDMLKEHSF-----YEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPET 169
AL +F +KE S + P TY LI +L G+ A ++ + G +P T
Sbjct: 267 ALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPDNST 326
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
Y L+ C+S +D+A I EM+ + PD Y+ L+ + A K L+E M
Sbjct: 327 YRILIQGCCKSYRMDDAMRIYGEMQYNGFV-PDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQ 289
+ + T NI++ G + G+ + + L+ D T + + G+
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCD-LKKKGQFVDAITFSIVGLQLCREGK 444
Query: 290 IDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNN 349
++ K E+ G + T + L+ + K+ +D +M+++R+ +N
Sbjct: 445 LEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRWNA 504
Query: 350 VIEAFTDVGDAKNMEYT 366
+EA +K+ +YT
Sbjct: 505 GVEASLKRPQSKDKDYT 521
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLF 155
V+ + LS + K A ++F++ + TY ++ K G AR +
Sbjct: 594 VDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVL 653
Query: 156 TTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD 215
M E C TY ++ + D A ++L+ + D+ Y+TLI
Sbjct: 654 DQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQG-GYLDIVMYNTLINALGK 712
Query: 216 AFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVW 275
A + D L++ M + I P+ V+ N ++ KAGK + K L +ML++ C P+
Sbjct: 713 ATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA-GCLPNHV 771
Query: 276 TMNTIISVFG 285
T +TI+ G
Sbjct: 772 T-DTILDYLG 780
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 80/170 (47%), Gaps = 4/170 (2%)
Query: 164 DPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVE 223
D + TY ++++++ + A +L++M + C D+ TY+ +I+ + DL
Sbjct: 627 DLTSYTYNSMMSSFVKKGYFQTARGVLDQMFEN-FCAADIATYNVIIQGLGKMGRADLAS 685
Query: 224 LLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISV 283
+ + + + + V N +++ GKA + D+ ++ M +S PDV + NT+I V
Sbjct: 686 AVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHM-KSNGINPDVVSYNTMIEV 744
Query: 284 FGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL--IGAYGKKRMYDKMSTV 331
G++ K+ + + G P T IL +G +K + K S V
Sbjct: 745 NSKAGKLKEAYKYLKAMLDAGCLPNHVTDTILDYLGKEMEKARFKKASFV 794
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 133/353 (37%), Gaps = 59/353 (16%)
Query: 153 QLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP 212
Q +++ G D P +L++ Y S L D A + + ++ DV T++ +I
Sbjct: 124 QFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAED-----KDVVTWTAMIDG 178
Query: 213 CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP 272
V + + +M + N +T VL GK V LE+ K
Sbjct: 179 FVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKC 238
Query: 273 DVWTMNTIISVFGNMGQIDMMEKWYEKF--RNFGIEPETRTFNILIGAYGKKRMYDKMST 330
DV+ ++++ ++G D +K +++ RN T+ LI Y + R +DK
Sbjct: 239 DVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRN------VVTWTALIAGYVQSRCFDKGML 292
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSK---------- 380
V E M K T ++V+ A VG M ++ ++
Sbjct: 293 VFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYV 352
Query: 381 ---------------------TFCCLINGFANAG-------LFHKVISTVQLAEKFEIAE 412
T+ +INGFA G LF+ ++S+ ++
Sbjct: 353 KCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS-------HVSP 405
Query: 413 NTTFYNAVLSACTKAEDLMEMERVFKRMKDN-QCPPDDTTYTIMIEAYRKEGM 464
N + AVLSAC + E R+F MK P Y M++ + ++G+
Sbjct: 406 NEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGL 458
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 97/225 (43%), Gaps = 13/225 (5%)
Query: 96 VNTVTEDLSERIEKKQWLQALEVFD-MLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQL 154
V T T ++ ++ + + + + VF+ MLK S P E T ++ G HR R++
Sbjct: 271 VVTWTALIAGYVQSRCFDKGMLVFEEMLK--SDVAPNEKTLSSVLSACAHVGALHRGRRV 328
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-C 213
MI+ + + T L+ Y + L+EA + + + +V+T++ +I
Sbjct: 329 HCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLH-----EKNVYTWTAMINGFA 383
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPD 273
+ D +L Y M + + PN VT VLS G ++ ++ SM + +P
Sbjct: 384 AHGYARDAFDLFYT-MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPK 442
Query: 274 VWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA 318
++ +FG G ++ + E+ +EP + L G+
Sbjct: 443 ADHYACMVDLFGRKGLLEEAKALIER---MPMEPTNVVWGALFGS 484
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/349 (19%), Positives = 136/349 (38%), Gaps = 20/349 (5%)
Query: 132 EGTYMKLIVLLGKSGQPHRARQLFTTMIEEG---CDPSPETYTALLAAYCRSNLLDEAFS 188
E T + ++ GK R + +E G CD ++L+ Y + + D+A
Sbjct: 204 EMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVF--IGSSLVDMYGKCSCYDDAQK 261
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ +EM + +V T++ LI V + FD L++E+M + PN T + VLS
Sbjct: 262 VFDEMPSR-----NVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSAC 316
Query: 249 GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE 308
G + +V M+++ S + + T+I ++ G ++ +E+ E
Sbjct: 317 AHVGALHRGRRVHCYMIKN-SIEINTTAGTTLIDLYVKCGCLEEAILVFERLH----EKN 371
Query: 309 TRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFD 368
T+ +I + + M T+ V+ A G + F
Sbjct: 372 VYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFL 431
Query: 369 QMRAE-GMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
M+ M+ + + C+++ F GL + + L E+ + + A+ +C
Sbjct: 432 SMKGRFNMEPKADHYACMVDLFGRKGLLEEAKA---LIERMPMEPTNVVWGALFGSCLLH 488
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKK 476
+D + R+ Q P YT++ Y + D++ + ++ K
Sbjct: 489 KDYELGKYAASRVIKLQ-PSHSGRYTLLANLYSESQNWDEVARVRKQMK 536
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/294 (22%), Positives = 122/294 (41%), Gaps = 19/294 (6%)
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
RQ+ ++ G D S T L+ Y L +A + +EM DV ++ L+
Sbjct: 135 GRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEM-----LVKDVNVWNALL 189
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
+ D L E M + N V+ V+SGY K+G+ + +V ML +
Sbjct: 190 AGYGKVGEMDEARSLLEMMPCW--VRNEVSWTCVISGYAKSGRASEAIEVFQRMLME-NV 246
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMST 330
+PD T+ ++S ++G +++ E+ + G+ N +I Y K K
Sbjct: 247 EPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALD 306
Query: 331 VMEYMRKLQ-FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
V E + + WTT +I G F++M G++ + TF +++
Sbjct: 307 VFECVNERNVVTWTT-----IIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSAC 361
Query: 390 ANAG---LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
++ G L ++ ++++ K+ I N Y ++ +A L E + V K M
Sbjct: 362 SHVGWVDLGKRLFNSMR--SKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSM 413
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 2/118 (1%)
Query: 165 PSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
P+ TY +++ +C+ + +D+A +L+ M + C PDV T+STLI A + D
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIIS 282
++ +M R I+ NTVT ++ G+ + G D + +L+ M+ S PD T + +++
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMI-SCGVAPDYITFHCMLA 123
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 60/138 (43%)
Query: 272 PDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTV 331
P T N++I F ++D ++ + + G P+ TF+ LI Y K + D +
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 332 MEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFAN 391
M + T TY +I F VGD + ++M + G+ D TF C++ G +
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 392 AGLFHKVISTVQLAEKFE 409
K + ++ +K E
Sbjct: 128 KKELRKAFAILEDLQKSE 145
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 55/118 (46%), Gaps = 1/118 (0%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P TY +I K + A+++ +M +GC P T++ L+ YC++ +D I
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
EM + V TY+TLI D + L +M + + P+ +T + +L+G
Sbjct: 68 FCEMHRRGIVANTV-TYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAG 124
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1955959-1959051 FORWARD
LENGTH=1030
Length = 1030
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 68/373 (18%), Positives = 151/373 (40%), Gaps = 8/373 (2%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ F+ +K+ + + G Y ++ + G++ +L + M + GCD T+T L+
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILI 231
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
+ Y ++ + + + +M+ + D Y+ +I+ A + DL Y++M + I
Sbjct: 232 SVYGKAKKIGKGLLVFEKMRKSGF-ELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
T ++L K+ K D ++ + M+ ++ F G+I
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHD-AFGYLLKSFCVSGKIKEAL 349
Query: 295 KWYEKFRNFGIEPETRTFNILI-GAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ + +N + + + F IL+ G RM D + +++ M++ + ++ Y +I
Sbjct: 350 ELIRELKNKEMCLDAKYFEILVKGLCRANRMVDALE-IVDIMKRRKLD-DSNVYGIIISG 407
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
+ D F+ ++ G T+ ++ F K + + I +
Sbjct: 408 YLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPD 467
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND---KIYY 470
+ AV++ + E +VF M++ P +Y+I ++ + D KI+
Sbjct: 468 SVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFN 527
Query: 471 LEQEKKTMITDGI 483
K +I D I
Sbjct: 528 QMHASKIVIRDDI 540
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 66/149 (44%), Gaps = 2/149 (1%)
Query: 107 IEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPS 166
+++ +AL+ + +KE +P Y LIV K Q + + M E C+PS
Sbjct: 865 LQRGDLQKALDKVNSMKEIG-TKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPS 923
Query: 167 PETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLY 226
TYTA++ Y ++EA++ M+ PD TYS I A K + L
Sbjct: 924 VVTYTAMICGYMSLGKVEEAWNAFRNMEERG-TSPDFKTYSKFINCLCQACKSEDALKLL 982
Query: 227 EDMAARSIMPNTVTQNIVLSGYGKAGKFD 255
+M + I P+T+ V G + GK D
Sbjct: 983 SEMLDKGIAPSTINFRTVFYGLNREGKHD 1011
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 158/384 (41%), Gaps = 64/384 (16%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+ALE F+++K+ S P+ TY +++ L K Q + LF MIE G +P TA+
Sbjct: 416 KALEQFEVIKK-SGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAV 474
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM-AAR 232
+A + N + EA+ + + M+ + +P +YS +K + ++D + ++ M A++
Sbjct: 475 VAGHLGQNRVAEAWKVFSSMEEKGI-KPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Query: 233 SIMPNTVTQNIV----------------------------LSGYGKAGKFDQMEKVLSSM 264
++ + + ++ L+G GKA +F Q E+ +
Sbjct: 534 IVIRDDIFSWVISSMEKNGEKEKIHLIKEIQKRSNSYCDELNGSGKA-EFSQEEE----L 588
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
++ +C P + + + + ++D+ E + +R + A K +
Sbjct: 589 VDDYNC-PQLVQQSALPPALSAVDKMDVQEICR-------VLSSSRDWERTQEALEKSTV 640
Query: 325 YDKMSTVMEYMR--KLQ-------FPWT---------TSTYNNVIEAFTDVGDAKNMEYT 366
V+E +R K+Q F W + YN I+ D K M
Sbjct: 641 QFTPELVVEVLRHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSL 700
Query: 367 FDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEIAENTTFYNAVLSAC- 424
F +MR +G T+ +I + GL + I T ++ + I ++TF + C
Sbjct: 701 FYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLCE 760
Query: 425 TKAEDLMEMERVFKRMKDNQCPPD 448
K ++ E R F+ M + PD
Sbjct: 761 KKGRNVEEATRTFREMIRSGFVPD 784
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/410 (18%), Positives = 136/410 (33%), Gaps = 71/410 (17%)
Query: 106 RIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDP 165
R K Q L F + + + Y+ Y I + G + R LF M +GC
Sbjct: 652 RHAKIQGNAVLRFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMRSLFYEMRRQGCLI 711
Query: 166 SPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELL 225
+ +T+ ++ Y R+ L + A EMK+ L P T+ LI + ++ E
Sbjct: 712 TQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLI-PSSSTFKCLITVLCEKKGRNVEEAT 770
Query: 226 --YEDMAARSIMP----------------NTVTQNIVLSGYGKAG--------------- 252
+ +M +P NT L GK G
Sbjct: 771 RTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPVTVAYSIYIRALC 830
Query: 253 KFDQMEKVLSSM--LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETR 310
+ ++E+ LS + E D +T +I+ G + + G +P
Sbjct: 831 RIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVH 890
Query: 311 TFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQM 370
+ LI + K++ +K+ + M + TY +I + +G + F M
Sbjct: 891 VYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNM 950
Query: 371 RAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDL 430
G D KT+ + F N + AC K+ED
Sbjct: 951 EERGTSPDFKTY-------------------------------SKFINCLCQAC-KSEDA 978
Query: 431 MEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMIT 480
+ ++ M D P + + +EG +D Q+K ++
Sbjct: 979 L---KLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQKKSALVA 1025
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/300 (20%), Positives = 125/300 (41%), Gaps = 17/300 (5%)
Query: 142 LGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP 201
L K+G+ AR+LF M + ++ +L Y R + +AF + +M +
Sbjct: 195 LVKAGELRDARRLFDEMPQRDL----ISWNTMLDGYARCREMSKAFELFEKMP-----ER 245
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
+ ++ST++ A ++ ++++ M + N VT I+++GY + G + ++++
Sbjct: 246 NTVSWSTMVMGYSKAGDMEMARVMFDKMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLV 303
Query: 262 SSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGK 321
M+ S K D + +I++ G + + + + + + N L+ Y K
Sbjct: 304 DQMVAS-GLKFDAAAVISILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAK 362
Query: 322 KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKT 381
K V + K ++N ++ G K F +MR EG++ D T
Sbjct: 363 CGNLKKAFDVFNDIPKKDL----VSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVT 418
Query: 382 FCCLINGFANAGLFHKVISTVQLAEK-FEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
F ++ +AGL + I EK +++ Y ++ + L E +V + M
Sbjct: 419 FIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTM 478
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/360 (22%), Positives = 144/360 (40%), Gaps = 45/360 (12%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A+ VF+ ++E P LI ++ QP++A +F+ M G TY LL
Sbjct: 70 AVRVFNQVQE-----PNVHLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLL 124
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI---KPCVDAFKFDLVELLYEDMAA 231
A + L + N ++ L D++ + LI C D ++L +E M+
Sbjct: 125 KACSGQSWLPVVKMMHNHIEKLGL-SSDIYVPNALIDCYSRCGGLGVRDAMKL-FEKMSE 182
Query: 232 RSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQID 291
R +TV+ N +L G KAG+ ++ M + D+ + NT++ + +
Sbjct: 183 R----DTVSWNSMLGGLVKAGELRDARRLFDEMPQR-----DLISWNTMLDGYARCRE-- 231
Query: 292 MMEKWYEKFRNFGIEPETRTFNILIGAYGK-------KRMYDKMSTVMEYMRKLQFPWTT 344
M K +E F E T +++ ++ Y K + M+DKM +
Sbjct: 232 -MSKAFELFEKMP-ERNTVSWSTMVMGYSKAGDMEMARVMFDKMPLPAK---------NV 280
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQL 404
T+ +I + + G K + DQM A G+K D+ ++ +GL + +
Sbjct: 281 VTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSI 340
Query: 405 AEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDD-TTYTIMIEAYRKEG 463
++ + N NA+L K +L + VF N P D ++ M+ G
Sbjct: 341 LKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVF-----NDIPKKDLVSWNTMLHGLGVHG 395
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 131/329 (39%), Gaps = 22/329 (6%)
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPC 213
L + + E G +PS E AL S +L + EMK P +F +++
Sbjct: 88 LESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAEMKPGFTLSPSLF--DSVVNSL 145
Query: 214 VDAFKFDLVELLYEDMAARSIMPNTVTQN---IVLSGYGKAGKFDQMEKVLS-SMLESTS 269
A +F++ L D N V+ + +++ Y +AG Q + +
Sbjct: 146 CKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIRRYARAGMVQQAIRAFEFARSYEPV 205
Query: 270 CKP--DVWTMNTIISVFGNMGQIDMMEKWYEKF---RNFGIEPETRTFNILIGAYGKKRM 324
CK ++ + ++ G + + E+ + P R FNIL+ + + R
Sbjct: 206 CKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRK 265
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCC 384
+ + E M+ + T TY +IE + + + ++M+ M+ + F
Sbjct: 266 LKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNP 325
Query: 385 LINGFANAGLFHKVISTVQLAEKFEIAEN---TTFYNAVLSACTKAEDLMEMERVFKRMK 441
+I+G AG ++ + + E+F + E+ YN+++ KA DL ++ K M
Sbjct: 326 IIDGLGEAG---RLSEALGMMERFFVCESGPTIVTYNSLVKNFCKAGDLPGASKILKMMM 382
Query: 442 DNQCPPDDTTYTIMIEAYRK-----EGMN 465
P TTY + + K EGMN
Sbjct: 383 TRGVDPTTTTYNHFFKYFSKHNKTEEGMN 411
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 126/339 (37%), Gaps = 7/339 (2%)
Query: 134 TYMKLIVLLGKSGQPHRARQLF--TTMIEEGCDPSPET--YTALLAAYCRSNLLDEAFSI 189
T++ LI ++G +A + F E C + E LL A C+ + EA
Sbjct: 175 TFIVLIRRYARAGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMY 234
Query: 190 LNEMKNHPLCQ--PDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSG 247
L + P V ++ L+ + K E L+E+M A ++ P VT ++ G
Sbjct: 235 LERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEG 294
Query: 248 YGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEP 307
Y + + +VL M + + + N II G G++ E+F P
Sbjct: 295 YCRMRRVQIAMEVLEEM-KMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGP 353
Query: 308 ETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTF 367
T+N L+ + K S +++ M TT+TYN+ + F+ + +
Sbjct: 354 TIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLY 413
Query: 368 DQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKA 427
++ G D T+ ++ G + + + I + ++ +
Sbjct: 414 FKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRL 473
Query: 428 EDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMND 466
E L E F P T+ ++ R +GM+D
Sbjct: 474 EMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSD 512
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 8/142 (5%)
Query: 129 EPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFS 188
+P TY K + L+ +IE G P TY +L C L A
Sbjct: 387 DPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQ 446
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM---AARSIMPNTVTQNIVL 245
+ EMKN + PD+ T + LI + +++E +E+ R I+P +T ++
Sbjct: 447 VNKEMKNRGI-DPDLLTTTMLIHLLC---RLEMLEEAFEEFDNAVRRGIIPQYITFKMID 502
Query: 246 SGYGKAGKFDQMEKVLSSMLES 267
+G G D M K LSS++ S
Sbjct: 503 NGLRSKGMSD-MAKRLSSLMSS 523
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/326 (19%), Positives = 133/326 (40%), Gaps = 37/326 (11%)
Query: 164 DPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVD--AFK--- 218
DP+ ++++L+ A ++ L ++ + + M +H L PD L K C + AFK
Sbjct: 78 DPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLI-PDSHVLPNLFKVCAELSAFKVGK 136
Query: 219 ----------FDLVELLYEDM-----------AARSIM-----PNTVTQNIVLSGYGKAG 252
D+ + M AR + + VT + +L Y + G
Sbjct: 137 QIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKG 196
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
+++ ++LS M ES+ + ++ + N I+S F G ++K + G P+ T
Sbjct: 197 CLEEVVRILSEM-ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTV 255
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
+ ++ + G M + + Y+ K + +I+ + G + F+Q
Sbjct: 256 SSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQF-- 313
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
E M+A I G + GL K + +L ++ + N + ++++ C + +E
Sbjct: 314 EMMEAGVCN--AYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIE 371
Query: 433 MERVFKRMKDNQCPPDDTTYTIMIEA 458
+F+ M+ P+ T M+ A
Sbjct: 372 ALELFREMQVAGVKPNHVTIPSMLPA 397
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/297 (18%), Positives = 118/297 (39%), Gaps = 10/297 (3%)
Query: 144 KSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDV 203
+ G+ AR++F M D T +ALL AY R L+E IL+EM++ + + ++
Sbjct: 163 RCGRMGDARKVFDRM----SDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGI-EANI 217
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
+++ ++ + ++++ + P+ VT + VL G + + M +++
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLN-MGRLIHG 276
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
+ D ++ +I ++G G + + + +F E N I +
Sbjct: 277 YVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMM----EAGVCNAYITGLSRNG 332
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+ DK + E ++ ++ ++I G F +M+ G+K + T
Sbjct: 333 LVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIP 392
Query: 384 CLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
++ N ST A + + +N +A++ K + + VF M
Sbjct: 393 SMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMM 449
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/378 (19%), Positives = 155/378 (41%), Gaps = 70/378 (18%)
Query: 167 PETYTALLAA----------YCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDA 216
PE+ +AL+ R N L+EA ++ + C+P +FT +T++ +
Sbjct: 85 PESVSALVGKRLDLHNHILKLIRENDLEEA-ALYTRHSVYSNCRPTIFTVNTVLAAQLRQ 143
Query: 217 FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWT 276
K+ + L+ + I PN +T N++ Y K + + +++ P + T
Sbjct: 144 AKYGALLQLHGFINQAGIAPNIITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIAT 203
Query: 277 MNTIISVFGNMGQIDMMEKWYE-----KFRNFGIEPETRTFNILIG------AYGKKRMY 325
++ + D +EK E + F ++P ++ +++G A G ++Y
Sbjct: 204 FRILVK---GLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSY-LMMGCVKNSDADGVLKLY 259
Query: 326 DKMSTVME----------------YMRKLQ----------------FPWTTSTYNNVIEA 353
++ + +M++++ + YN V+EA
Sbjct: 260 QELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEA 319
Query: 354 FTDVGDAKNMEYTFDQMRAEG-----MKADSKTFCCLINGFANAGLFHKVISTVQLAEKF 408
++ G FD ++ E + + TF ++NG+ G F + + + F
Sbjct: 320 LSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDF 379
Query: 409 EIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDK- 467
+ + +T +N +++ E L E E+++ M++ PD+ TY ++++ KEG D+
Sbjct: 380 KCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEG 439
Query: 468 -IYYLEQEKKTMITDGIK 484
YY KTM+ ++
Sbjct: 440 AAYY-----KTMVESNLR 452
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 91/205 (44%), Gaps = 14/205 (6%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLK-EHSFYEPKE-----GTYMKLIVLLGKSGQPHR 150
N V E LSE ++ +AL++FD +K EH+ P+ GT+ ++ G+
Sbjct: 314 NYVLEALSEN---GKFDEALKLFDAVKKEHN--PPRHLAVNLGTFNVMVNGYCAGGKFEE 368
Query: 151 ARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLI 210
A ++F M + C P ++ L+ C + LL EA + EM+ + +PD +TY L+
Sbjct: 369 AMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNV-KPDEYTYGLLM 427
Query: 211 KPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSC 270
C K D Y+ M ++ PN N + KAGK D + M+ +
Sbjct: 428 DTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMV--SKL 485
Query: 271 KPDVWTMNTIISVFGNMGQIDMMEK 295
K D I+ G++D M K
Sbjct: 486 KMDDEAYKFIMRALSEAGRLDEMLK 510
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/355 (19%), Positives = 142/355 (40%), Gaps = 13/355 (3%)
Query: 147 QPHRARQLFTTMIEEG-CDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFT 205
+P A + + I+ +PS T+ L+ ++ L++A I +M D
Sbjct: 180 KPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIKEDMAVKGFV-VDPVV 238
Query: 206 YSTLIKPCVDAFKFDLVELLYEDMAAR--SIMPNTVTQNIVLSGY-GKAGKFDQMEKVLS 262
YS L+ CV D V LY+++ + + + V ++ GY K + + ME
Sbjct: 239 YSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEE 298
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPE-----TRTFNILIG 317
++ E++ + N ++ G+ D K ++ + P TFN+++
Sbjct: 299 AVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVN 358
Query: 318 AYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKA 377
Y +++ V M + T ++NN++ D E + +M + +K
Sbjct: 359 GYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKP 418
Query: 378 DSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVF 437
D T+ L++ G + + + + + N YN + KA L + + F
Sbjct: 419 DEYTYGLLMDTCFKEGKIDEGAAYYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFF 478
Query: 438 KRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYYLEQEKKTMITDGIKVSQPEDEF 492
M ++ DD Y ++ A + G D++ + E + D ++VS+ EF
Sbjct: 479 DMMV-SKLKMDDEAYKFIMRALSEAGRLDEMLKIVDE--MLDDDTVRVSEELQEF 530
>AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28617948-28622581 REVERSE
LENGTH=801
Length = 801
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/373 (20%), Positives = 142/373 (38%), Gaps = 57/373 (15%)
Query: 143 GKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPD 202
G+S A QL M G PS TY + A + ++L M+ L +P
Sbjct: 340 GQSKNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLKVMQQQNL-KPY 398
Query: 203 VFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLS 262
T +T+ C A + DL E L + ++ S + N +L+ Y + ++ +VL+
Sbjct: 399 DSTLATVAAYCSKALQVDLAEHLLDQISECSY---SYPFNNLLAAYDSLDQPERAVRVLA 455
Query: 263 SMLESTSCKPDVWTMNTIISVFGNMG---------------------QIDMMEKWYEK-- 299
M E +PD+ T + S+FGN+ ++DMM ++
Sbjct: 456 RMKE-LKLRPDMRTYELLFSLFGNVNAPYEEGNMLSQVDCCKRINAIEMDMMRNGFQHSP 514
Query: 300 ------FRNFGIEP-----------------------ETRTFNILIGAYGKKRMYDKMST 330
R G E T T+NI++ + + D +
Sbjct: 515 ISRLNVLRALGAEGMVNEMIRHLQKAENLSAHSNMYLGTPTYNIVLHSLLEANETDMVIN 574
Query: 331 VMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFA 390
+ + M+ P +TYN +I+ + + K+ M +G + TF L+
Sbjct: 575 IFKRMKSCGCPADVATYNIMIDCCSLIHSYKSACALVSMMIRDGFSPKAVTFTALMKILL 634
Query: 391 NAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDT 450
N F + ++ + A EI + YN +L + + +E + ++M + PD T
Sbjct: 635 NDANFEEALNLLDQAALEEIHLDVLSYNTILRKAFEKGMIDVIEYIVEQMHREKVNPDPT 694
Query: 451 TYTIMIEAYRKEG 463
T + Y ++G
Sbjct: 695 TCHYVFSCYVEKG 707
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 133/308 (43%), Gaps = 28/308 (9%)
Query: 142 LGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQP 201
LG + H A +F M PS T+ +LL A L + I M + L
Sbjct: 429 LGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGL-NL 487
Query: 202 DVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVL 261
D+F S LI + + L++++M + + V N + +GY + + E+ L
Sbjct: 488 DIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDL----VIWNSMFAGYVQQ---SENEEAL 540
Query: 262 SSMLES--TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
+ LE + +PD +T +++ GN+ + + ++++ + G+E N L+ Y
Sbjct: 541 NLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600
Query: 320 GK-------KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
K + +D ++ +N+VI ++ + G+ K ++M +
Sbjct: 601 AKCGSPEDAHKAFDSAASR-----------DVVCWNSVISSYANHGEGKKALQMLEKMMS 649
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
EG++ + TF +++ ++AGL + +L +F I T Y ++S +A L +
Sbjct: 650 EGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETEHYVCMVSLLGRAGRLNK 709
Query: 433 MERVFKRM 440
+ ++M
Sbjct: 710 ARELIEKM 717
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 169/418 (40%), Gaps = 85/418 (20%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLG--KSGQPHRARQL 154
N + EDL + + Q A +V+D + P + T ++ G K+G AR L
Sbjct: 52 NFIVEDL---LRRGQVSAARKVYDEM-------PHKNTVSTNTMISGHVKTGDVSSARDL 101
Query: 155 FTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ-PDVFTYSTLIKPC 213
F M D + T+T L+ Y R++ DEAF + +M C PD T++TL+ C
Sbjct: 102 FDAMP----DRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGC 157
Query: 214 VDAF-------------------------------------KFDLVELLYEDMAARSIMP 236
DA + DL +L+E++ +
Sbjct: 158 NDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK---- 213
Query: 237 NTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKW 296
++VT N +++GY K G + + + M +S +P +T + ++ + + ++
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGH-QPSDFTFSGVLKAVVGLHDFALGQQL 272
Query: 297 YEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD 356
+ G + N ++ Y K + + + M +L F +YN VI +++
Sbjct: 273 HALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFV----SYNVVISSYSQ 328
Query: 357 VGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFE----IAE 412
+ + F +M+ G + F +++ AN +S++Q+ + +A
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAAN-------LSSLQMGRQLHCQALLAT 381
Query: 413 NTTFY---NAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTT--YTIMIEAYRKEGMN 465
+ N+++ K E E E +FK + P TT +T +I Y ++G++
Sbjct: 382 ADSILHVGNSLVDMYAKCEMFEEAELIFKSL------PQRTTVSWTALISGYVQKGLH 433
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/386 (20%), Positives = 168/386 (43%), Gaps = 51/386 (13%)
Query: 106 RIEKKQWLQALEVFDMLKEHSFYEPKEGTYMK------------LIVLLGKSGQPHRARQ 153
R+ + + +++ LKE F E + +K L+V K A +
Sbjct: 292 RLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALR 351
Query: 154 LFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIK-- 211
LF E GC + ++TA+++ + +++ +EA + +EMK + +P+ FTYS ++
Sbjct: 352 LFK---EIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGV-RPNEFTYSVILTAL 407
Query: 212 PCVDAFKF--DLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTS 269
P + + +V+ YE RS T +L Y K GK ++ KV S + +
Sbjct: 408 PVISPSEVHAQVVKTNYE----RSSTVGTA----LLDAYVKLGKVEEAAKVFSGIDD--- 456
Query: 270 CKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILI-------GAYGKK 322
D+ + +++ + G+ + K + + GI+P TF+ ++ + G+
Sbjct: 457 --KDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQG 514
Query: 323 RMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
+ + + K + + + ++ + G+ ++ E F + R + D ++
Sbjct: 515 KQFHGFAI------KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREK----DLVSW 564
Query: 383 CCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM-K 441
+I+G+A G K + + +K ++ + + V +ACT A + E E+ F M +
Sbjct: 565 NSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVR 624
Query: 442 DNQCPPDDTTYTIMIEAYRKEGMNDK 467
D + P + M++ Y + G +K
Sbjct: 625 DCKIAPTKEHNSCMVDLYSRAGQLEK 650
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/291 (20%), Positives = 121/291 (41%), Gaps = 42/291 (14%)
Query: 136 MKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN 195
+KL++L SG A LF ++ P + A+++ Y + L E I +M+
Sbjct: 147 VKLLILYALSGDLQTAGILFRSLKIRDLIP----WNAMISGYVQKGLEQEGLFIYYDMRQ 202
Query: 196 HPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTV---------------- 239
+ + PD +T++++ + C + + + + M R I N +
Sbjct: 203 NRIV-PDQYTFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFS 261
Query: 240 ----------TQNIV-----LSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
T+N++ +SGYG GK ++ K M E C+P+ T +++
Sbjct: 262 DGHRVFDQLSTRNVITWTSLISGYGYHGKVSEVLKCFEKMKEE-GCRPNPVTFLVVLTAC 320
Query: 285 GNMGQIDM-MEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT 343
+ G +D E +Y R++GIEPE + + ++ G+ ++ E++ K
Sbjct: 321 NHGGLVDKGWEHFYSMKRDYGIEPEGQHYAAMVDTLGRA---GRLQEAYEFVMKSPCKEH 377
Query: 344 TSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGL 394
+ +++ A G+ K +E + E + + NG+A+ GL
Sbjct: 378 PPVWGSLLGACRIHGNVKLLELAATKF-LELDPTNGGNYVVFANGYASCGL 427
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/347 (20%), Positives = 138/347 (39%), Gaps = 42/347 (12%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPE----TYTALLAAYCRSNLLDEAFSILNEM 193
LI L K + AR +F + P PE ++TA+++AY ++ EA I ++M
Sbjct: 160 LIALYAKCRRLGSARTVFEGL------PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQM 213
Query: 194 KNHPLCQPDVFTYSTLIKP--CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVL------ 245
+ + +PD +++ C+ K RSI + V + +
Sbjct: 214 RKMDV-KPDWVALVSVLNAFTCLQDLK-----------QGRSIHASVVKMGLEIEPDLLI 261
Query: 246 ---SGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRN 302
+ Y K G+ K+L ++S P++ N +IS + G + + N
Sbjct: 262 SLNTMYAKCGQV-ATAKILFDKMKS----PNLILWNAMISGYAKNGYAREAIDMFHEMIN 316
Query: 303 FGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKN 362
+ P+T + I A + ++ ++ EY+ + + + +I+ F G +
Sbjct: 317 KDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEG 376
Query: 363 MEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLS 422
FD+ + D + +I G+ G + IS + E+ + N + +L
Sbjct: 377 ARLVFDRT----LDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLM 432
Query: 423 ACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
AC + + E F RM D++ P Y +I+ + G D+ Y
Sbjct: 433 ACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAY 479
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/305 (19%), Positives = 125/305 (40%), Gaps = 15/305 (4%)
Query: 164 DPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQ--PDVFTYSTLIKPCVDAFKFDL 221
+P+ ++ + + S E+F + +M H C+ PD FTY L K C D L
Sbjct: 115 NPNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSL 174
Query: 222 VELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTII 281
++ + + + N + + G + KV S D+ + N +I
Sbjct: 175 GHMILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDE-----SPVRDLVSWNCLI 229
Query: 282 SVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFP 341
+ + +G+ + Y+ + G++P+ T L+ + ++ EY+++
Sbjct: 230 NGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLR 289
Query: 342 WTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVIST 401
T N +++ F+ GD FD + K ++ +I+G+A GL +
Sbjct: 290 MTIPLVNALMDMFSKCGDIHEARRIFDNLE----KRTIVSWTTMISGYARCGLLD---VS 342
Query: 402 VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRK 461
+L + E ++ +NA++ +A+ + +F+ M+ + PD+ T + A +
Sbjct: 343 RKLFDDME-EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQ 401
Query: 462 EGMND 466
G D
Sbjct: 402 LGALD 406
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/330 (20%), Positives = 140/330 (42%), Gaps = 20/330 (6%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A+ V+ ++ E +P + T + L+ G +R ++ + + E G + AL
Sbjct: 240 KAIYVYKLM-ESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNAL 298
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ + + + EA I + ++ + + +++T+I D+ L++DM +
Sbjct: 299 MDMFSKCGDIHEARRIFDNLE-----KRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKD 353
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
+ V N ++ G +A K Q L +++++ KPD TM +S +G +D+
Sbjct: 354 V----VLWNAMIGGSVQA-KRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDV- 407
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTS--TYNNVI 351
W ++ IE + + N+ +G MY K + E + T + TY +I
Sbjct: 408 GIWIHRY----IEKYSLSLNVALGT-SLVDMYAKCGNISEALSVFHGIQTRNSLTYTAII 462
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTV-QLAEKFEI 410
GDA F++M G+ D TF L++ + G+ Q+ +F +
Sbjct: 463 GGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNL 522
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRM 440
Y+ ++ +A L E +R+ + M
Sbjct: 523 NPQLKHYSIMVDLLGRAGLLEEADRLMESM 552
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/383 (19%), Positives = 151/383 (39%), Gaps = 35/383 (9%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
NT+ SE E K L A+ +F + F EP T+ ++ K+G+ +Q+
Sbjct: 94 NTIIRGFSESDEDKA-LIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHG 152
Query: 157 TMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE---------MKNHPLCQPDVFTYS 207
++ G + L+ Y + +A + + M + ++ ++
Sbjct: 153 LALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWN 212
Query: 208 TLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLES 267
+I + +L++ M RS+ V+ N ++SGY G F +V M +
Sbjct: 213 VMIDGYMRLGDCKAARMLFDKMRQRSV----VSWNTMISGYSLNGFFKDAVEVFREM-KK 267
Query: 268 TSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDK 327
+P+ T+ +++ +G +++ E + + GI + + LI Y K + +K
Sbjct: 268 GDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEK 327
Query: 328 MSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
V E + + T++ +I F G A + F +MR G++ + L+
Sbjct: 328 AIHVFERLPR----ENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLT 383
Query: 388 GFANAGL-------FHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRM 440
++ GL F +++S L + E Y ++ ++ L E E M
Sbjct: 384 ACSHGGLVEEGRRYFSQMVSVDGLEPRIE------HYGCMVDLLGRSGLLDEAEEFILNM 437
Query: 441 KDNQCPPDDTTYTIMIEAYRKEG 463
PDD + ++ A R +G
Sbjct: 438 P---IKPDDVIWKALLGACRMQG 457
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 82/187 (43%), Gaps = 2/187 (1%)
Query: 130 PKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSI 189
P Y K+I L + + A +F + ++G P YT ++ +C L A +
Sbjct: 281 PSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKL 340
Query: 190 LNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYG 249
EM + +P+ F Y+ +I + LVE Y +M ++ N ++ G+
Sbjct: 341 WFEMIKKGM-RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFC 399
Query: 250 KAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPET 309
GK D+ ++ +M E T P+ T N +I F +++ K Y++ + G++P
Sbjct: 400 SHGKSDEAFEIFKNMSE-TGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSG 458
Query: 310 RTFNILI 316
+ L+
Sbjct: 459 MAYAALV 465
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/237 (21%), Positives = 103/237 (43%), Gaps = 4/237 (1%)
Query: 117 EVFDMLKE--HSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
E +++LK+ +P + Y KLI + G ++ TMI PS Y ++
Sbjct: 231 EGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKII 290
Query: 175 AAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSI 234
C + EA+ I +K+ PD Y+T+I+ + L+ +M + +
Sbjct: 291 KGLCMNKKQLEAYCIFKNLKDKGY-APDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGM 349
Query: 235 MPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMME 294
PN N+++ G+ K G+ +E + ML + + + NT+I F + G+ D
Sbjct: 350 RPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRN-GYGGTMLSCNTMIKGFCSHGKSDEAF 408
Query: 295 KWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVI 351
+ ++ G+ P T+N LI + K+ +K + + ++ L + Y ++
Sbjct: 409 EIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAALV 465
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/252 (18%), Positives = 103/252 (40%), Gaps = 8/252 (3%)
Query: 138 LIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMK--N 195
LI L G +L +++G DP Y L++ +C +L+ M N
Sbjct: 219 LIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWN 278
Query: 196 HPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKF 254
H P ++ Y +IK C++ + + +++++ + P+ V ++ G+ + G
Sbjct: 279 HF---PSMYIYQKIIKGLCMNKKQLE-AYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWL 334
Query: 255 DQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNI 314
K+ M++ +P+ + N +I G+I ++E +Y + G + N
Sbjct: 335 GSARKLWFEMIKK-GMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNT 393
Query: 315 LIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
+I + D+ + + M + TYN +I+ F + + +++A G
Sbjct: 394 MIKGFCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALG 453
Query: 375 MKADSKTFCCLI 386
+K + L+
Sbjct: 454 LKPSGMAYAALV 465
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 88/230 (38%), Gaps = 10/230 (4%)
Query: 236 PNTVTQNIVLSGY--GKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMM 293
P V+ NI+ GKA K S L++T KP+ + + G ++
Sbjct: 111 PGPVSLNILFGALLDGKA------VKAAKSFLDTTGFKPEPTLLEQYVKCLSEEGLVEEA 164
Query: 294 EKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEA 353
+ Y ++ GI T N ++ K R D+ + + M + +F + +I A
Sbjct: 165 IEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMVESEFD--SERIRCLIRA 222
Query: 354 FTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAEN 413
D GD Q +G+ + LI+GF G + + + + +
Sbjct: 223 LCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHFPS 282
Query: 414 TTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEG 463
Y ++ + +E +FK +KD PD YT MI + ++G
Sbjct: 283 MYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKG 332
>AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891360
REVERSE LENGTH=849
Length = 849
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 144/355 (40%), Gaps = 42/355 (11%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
V+ + + ++Y G KL LGK + + R++F ++ +G PS T+ L+
Sbjct: 221 GFRVYRWMTQQNWYRFDFGLTTKLAEYLGKERKFTKCREVFDDVLNQGRVPSESTFHILV 280
Query: 175 AAYCRS----NLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMA 230
AY S L+EA S+ N M +P + +++L + V L + L +
Sbjct: 281 VAYLSSLSVEGCLEEACSVYNRMIQLGGYKPRLSLHNSLFRALVSKQGGILNDQLKQ--- 337
Query: 231 ARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP--DVWTMN---------- 278
A I N VT + + + + S ++ SC+ D+ +N
Sbjct: 338 AEFIFHNVVTTGL-----------EVQKDIYSGLIWLHSCQDEVDIGRINSLREEMKKAG 386
Query: 279 ---------TIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMS 329
+++ + G ++ +E+ + + + ++ F I AY K + K
Sbjct: 387 FQESKEVVVSLLRAYAKEGGVEEVERTWLELLDLDCGIPSQAFVYKIEAYSKVGDFAKAM 446
Query: 330 TVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
+ M K T S Y+ +IE V + +E + G K +F + +
Sbjct: 447 EIFREMEKHIGGATMSGYHKIIEVLCKVQQVELVETLMKEFEESGKKPLLPSFIEIAKMY 506
Query: 390 ANAGLFHKV-ISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDN 443
+ GL K+ ++ VQ EK + ++ YN L + TK +L + VF MK+N
Sbjct: 507 FDLGLHEKLEMAFVQCLEKCQPSQ--PIYNIYLDSLTKIGNLEKAGDVFNEMKNN 559
>AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR)
repeat-containing protein | chr1:10846676-10850517
FORWARD LENGTH=978
Length = 978
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/347 (19%), Positives = 138/347 (39%), Gaps = 34/347 (9%)
Query: 112 WLQALEVFDMLKEHSFYEPKEG--TYMKLIVLLGKSGQPHRARQLFTTMIEE-GCDPSPE 168
W + L+V + L+ Y+ + Y + +LGKS +P A +F M+ + P
Sbjct: 485 WRRVLQVIEWLQRQDRYKSNKIRIIYTTALNVLGKSRRPVEALNVFHAMLLQISSYPDMV 544
Query: 169 TYTALLAAYCRSNLLDEAFSILNEMKN--------------HPLCQPDVFTYSTLIKPCV 214
Y ++ ++ + E F +++ M++ P +PDV Y+ ++ CV
Sbjct: 545 AYRSIAVTLGQAGHIKELFYVIDTMRSPPKKKFKPTTLEKWDPRLEPDVVVYNAVLNACV 604
Query: 215 DAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDV 274
+++ + + + R P+ VT +++ K++ + + M +S+ P+
Sbjct: 605 QRKQWEGAFWVLQQLKQRGQKPSPVTYGLIMEVMLACEKYNLVHEFFRKMQKSSI--PNA 662
Query: 275 WTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY-GKKRMYDKMSTVME 333
+++ G+ D E + GI + L R + ++ + +
Sbjct: 663 LAYRVLVNTLWKEGKSDEAVHTVEDMESRGIVGSAALYYDLARCLCSAGRCNEGLNMLKK 722
Query: 334 YMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGFANAG 393
R P TY +I+A D G+ KN Y FDQM+ + + T ++ + G
Sbjct: 723 ICRVANKPLVV-TYTGLIQACVDSGNIKNAAYIFDQMK-KVCSPNLVTCNIMLKAYLQGG 780
Query: 394 LFHKVISTVQL----------AEKFE--IAENTTFYNAVLSACTKAE 428
LF + Q + FE + +T +N +L C + E
Sbjct: 781 LFEEARELFQKMSEDGNHIKNSSDFESRVLPDTYTFNTMLDTCAEQE 827
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 128/335 (38%), Gaps = 58/335 (17%)
Query: 170 YTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDM 229
+ ++ Y S+ + AFS+ N+++ L D F++ T +K C + E L+
Sbjct: 93 FNTMIRGYSISDEPERAFSVFNQLRAKGL-TLDRFSFITTLKSCSRELCVSIGEGLHGIA 151
Query: 230 AARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKP----------------- 272
M T +N ++ Y GK KV M +S
Sbjct: 152 LRSGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALA 211
Query: 273 --------------DVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGA 318
+V T+ + +S ++G + E + G++ + LIG
Sbjct: 212 LDLFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGM 271
Query: 319 YGK-------KRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
YGK +R++D +RK W N +I+ + G + + QM+
Sbjct: 272 YGKTGGISSARRIFDCA------IRKDVVTW-----NCMIDQYAKTGLLEECVWLLRQMK 320
Query: 372 AEGMKADSKTFCCLIN--GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAED 429
E MK +S TF L++ ++ A + ++ L E+ IA + A++ K
Sbjct: 321 YEKMKPNSSTFVGLLSSCAYSEAAFVGRTVA--DLLEEERIALDAILGTALVDMYAKVGL 378
Query: 430 LMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGM 464
L + +F RMKD D ++T MI Y G+
Sbjct: 379 LEKAVEIFNRMKD----KDVKSWTAMISGYGAHGL 409
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/338 (19%), Positives = 135/338 (39%), Gaps = 19/338 (5%)
Query: 133 GTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNE 192
G KL+ L G A ++F M + D SP + +L++ Y ++A ++ +
Sbjct: 128 GISSKLVRLYASCGYAEVAHEVFDRMSKR--DSSPFAWNSLISGYAELGQYEDAMALYFQ 185
Query: 193 MKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAG 252
M + +PD FT+ ++K C + E ++ D+ + N ++ Y K G
Sbjct: 186 MAEDGV-KPDRFTFPRVLKACGGIGSVQIGEAIHRDLVKEGFGYDVYVLNALVVMYAKCG 244
Query: 253 KFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTF 312
+ V + D + N++++ + + G + + GIEP+
Sbjct: 245 DIVKARNVFDMI-----PHKDYVSWNSMLTGYLHHGLLHEALDIFRLMVQNGIEPDKVAI 299
Query: 313 NILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRA 372
+ ++ + + + ++ + W S N +I ++ G + FDQM
Sbjct: 300 SSVL---ARVLSFKHGRQLHGWVIRRGMEWELSVANALIVLYSKRGQLGQACFIFDQM-- 354
Query: 373 EGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLME 432
++ D+ ++ +I+ + K + A + TF +VLS C + +
Sbjct: 355 --LERDTVSWNAIISAHSKNSNGLKYFEQMHRANA--KPDGITFV-SVLSLCANTGMVED 409
Query: 433 MERVFKRM-KDNQCPPDDTTYTIMIEAYRKEGMNDKIY 469
ER+F M K+ P Y M+ Y + GM ++ Y
Sbjct: 410 GERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAY 447
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 3/132 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A EV +++ +P TY +I K G A+++ ++ SP TY AL
Sbjct: 425 EAKEVLKLMESRGL-KPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHAL 483
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKP-CVDAFKFDLVELLYEDMAAR 232
+ YC+ DEA +LNEM + QP+ Y+ LI+ C+ A ++ E+L+E+M +
Sbjct: 484 IRGYCKIEEYDEALKLLNEMDRFGV-QPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
Query: 233 SIMPNTVTQNIV 244
+ N ++Q ++
Sbjct: 543 GLHLNAISQGLI 554
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 115/297 (38%), Gaps = 38/297 (12%)
Query: 115 ALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALL 174
A +VF +E F P TY + L K A + M++ G E ++
Sbjct: 250 AFDVFSKTEEFGFT-PNAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNII 308
Query: 175 AAYCRSNLLDEAFSILNEMKNH--------------PLCQPD---VFTYSTL-------- 209
+C+ +EA+S+ K LC+ D F L
Sbjct: 309 TWFCKEGKAEEAYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEAR 368
Query: 210 ---IKPCVDAF-------KFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEK 259
IKP D + L DM ++ P N+V+ K G D+ ++
Sbjct: 369 RRGIKPFSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKE 428
Query: 260 VLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAY 319
VL ++ES KPDV+T IIS + G +D ++ + + + T++ LI Y
Sbjct: 429 VL-KLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGY 487
Query: 320 GKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAF-TDVGDAKNMEYTFDQMRAEGM 375
K YD+ ++ M + YN +I++F D + E F++M+ +G+
Sbjct: 488 CKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQKGL 544
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/328 (20%), Positives = 129/328 (39%), Gaps = 46/328 (14%)
Query: 137 KLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNH 196
+LI L GK G+ A +F+ E G P+ +TY L A C+ + +D A S+
Sbjct: 236 ELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSV------- 288
Query: 197 PLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQ 256
C E M ++ +++ + K GK ++
Sbjct: 289 ----------------C-------------EKMLKSGVLSEGEQMGNIITWFCKEGKAEE 319
Query: 257 MEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQI----DMMEKWYEKFRNFGIEPETRTF 312
V P + I ++ N G I +M+ + R GI+P F
Sbjct: 320 AYSVYELAKTKEKSLPPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----F 375
Query: 313 NILIGAYGKKR-MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMR 371
+ +I + + R + D + +++ + K P + +N V+ A + GD + M
Sbjct: 376 SDVIHSLCRMRNVKDAKALLLDMISKGPAP-GNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 372 AEGMKADSKTFCCLINGFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
+ G+K D T+ +I+G+A G+ + + A+K + Y+A++ K E+
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEAY 459
E ++ M P+ Y +I+++
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSF 522
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 4/143 (2%)
Query: 114 QALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTAL 173
+A + ++E EP TY LI L K+ + A+Q+F M+E+G P+ TY A
Sbjct: 355 EARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAF 414
Query: 174 LAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARS 233
+ R+ +E F +L +M+ C+P V TY LI+ FD V LL+++M ++
Sbjct: 415 MRIL-RTG--EEVFELLAKMRKMG-CEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKT 470
Query: 234 IMPNTVTQNIVLSGYGKAGKFDQ 256
+ P+ + +++ G GK ++
Sbjct: 471 VGPDLSSYIVMIHGLFLNGKIEE 493
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 91/183 (49%), Gaps = 4/183 (2%)
Query: 134 TYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEM 193
+Y +I K G ++ +LF M +E +P + Y A++ A +++ + EA +++ M
Sbjct: 304 SYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTM 363
Query: 194 KNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGK 253
+ +P+V TY++LIKP A K + + ++++M + + P T + + + G
Sbjct: 364 EEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL-RTG- 421
Query: 254 FDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFN 313
+++ ++L+ M C+P V T +I D + +++ + + P+ ++
Sbjct: 422 -EEVFELLAKM-RKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYI 479
Query: 314 ILI 316
++I
Sbjct: 480 VMI 482
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/232 (21%), Positives = 101/232 (43%), Gaps = 6/232 (2%)
Query: 146 GQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFT 205
G P A +++ M G +Y+++++ Y + L++ + + MK + +PD
Sbjct: 281 GSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECI-EPDRKV 339
Query: 206 YSTLIKPCVDA-FKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSM 264
Y+ ++ A F + L+ + I PN VT N ++ KA K ++ ++V M
Sbjct: 340 YNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEM 399
Query: 265 LESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRM 324
LE P + T + + + ++ + K R G EP T+ +LI + R
Sbjct: 400 LEK-GLFPTIRTYHAFMRILRTGEEVFEL---LAKMRKMGCEPTVETYIMLIRKLCRWRD 455
Query: 325 YDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMK 376
+D + + + M++ S+Y +I G + + +M+ +GM+
Sbjct: 456 FDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMR 507
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/225 (21%), Positives = 102/225 (45%), Gaps = 9/225 (4%)
Query: 168 ETYTALLAAYCRSNLLD---EAFSILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVEL 224
+++ +L +C N++ EA + EM N + + DV +YS++I + V
Sbjct: 267 KSFNIVLNGWC--NVIGSPREAERVWMEMGNVGV-KHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L++ M I P+ N V+ KA + ++ +M E +P+V T N++I
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 285 GNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTT 344
+ + ++ +++ G+ P RT++ + R +++ ++ MRK+ T
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRIL---RTGEEVFELLAKMRKMGCEPTV 440
Query: 345 STYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLINGF 389
TY +I D N+ +D+M+ + + D ++ +I+G
Sbjct: 441 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGL 485
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 161/396 (40%), Gaps = 30/396 (7%)
Query: 97 NTVTEDLSERIEKKQWLQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFT 156
N + ++ R+ + W A F + Y Y +I +LGK + A
Sbjct: 127 NELVVEILSRV-RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTA----W 181
Query: 157 TMIEEGCDPSP-----ETYTALLAAYCRSNLLDEAFSILNEMKNHPLCQPDVFTYSTLIK 211
T+I+E SP +T ++ YC + + +A + + K L + + + +L+
Sbjct: 182 TLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKL-EMGIDDFQSLLS 240
Query: 212 P-CVDAFKFDLVELLYEDMAARSIMP-NTVTQNIVLSGYGKA-GKFDQMEKVLSSMLEST 268
C D L++ + P + + NIVL+G+ G + E+V M +
Sbjct: 241 ALCRYKNVSDAGHLIF---CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEM-GNV 296
Query: 269 SCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKRMYDKM 328
K DV + +++IS + G ++ + K +++ + IEP+ + +N ++ A K +
Sbjct: 297 GVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEA 356
Query: 329 STVMEYMRKLQ-FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLIN 387
+M+ M + + TYN++I+ + + FD+M +G+ +T+ +
Sbjct: 357 RNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR 416
Query: 388 GFANAGLFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPP 447
+V + K Y ++ + D + ++ MK+ P
Sbjct: 417 ILRTG---EEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGP 473
Query: 448 DDTTYTIMIEAYRKEGMNDKI-----YYLEQEKKTM 478
D ++Y +MI +N KI YY E + K M
Sbjct: 474 DLSSYIVMIHGL---FLNGKIEEAYGYYKEMKDKGM 506
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/424 (21%), Positives = 167/424 (39%), Gaps = 76/424 (17%)
Query: 113 LQALEVFDMLKEHSFYEPKEGTYMKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTA 172
L+AL++F + EH F P +GTY+ ++ + RQ+ +I+ GC+ A
Sbjct: 298 LKALKLFVSMPEHGF-SPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 173 LLAAY-----------CRSNLLDEAFSILNEM------KNHPLC------------QPDV 203
L+ Y C + D+ N + K+ P+C +P
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGPICLSLFLQMLQMGFRPTE 416
Query: 204 FTYSTLIKPC----VDAFKFDLVELLYED------MAARSIMPN---------------- 237
+T+ST +K C + +V + YED RS N
Sbjct: 417 YTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGP 476
Query: 238 --TVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEK 295
V NIV Y + G++ + K++S++ + PD + N I+ + D E+
Sbjct: 477 TSVVPLNIVAGIYSRRGQYHESVKLISTLEQ-----PDTVSWNIAIAA---CSRSDYHEE 528
Query: 296 WYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWT-TSTYNNVI 351
E F++ I P+ TF ++ K S++ + K F T N +I
Sbjct: 529 VIELFKHMLQSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLI 588
Query: 352 EAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCL-INGFANAGLFHKVISTVQLAEKFEI 410
+ + G +++ F++ R + + + CL I+G+ L K T+ L K
Sbjct: 589 DMYGKCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEAL-EKFKETLSLGFK--- 644
Query: 411 AENTTFYNAVLSACTKAEDLMEMERVFKRMKDNQCPPDDTTYTIMIEAYRKEGMNDKIYY 470
+ + ++L+AC + E +F++MKD P+ Y ++ + G + +
Sbjct: 645 -PDRVSFISILTACRHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEH 703
Query: 471 LEQE 474
L +E
Sbjct: 704 LIRE 707
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 9/176 (5%)
Query: 189 ILNEMKNHPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGY 248
+ EM L V TY+TLI+ A D+ + ++++M + + P+ +T NI+L G
Sbjct: 3 LFREMSQRGLVGNTV-TYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 249 GKAGKFDQ---MEKV-----LSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKF 300
K GK ++ KV L L KP+V T T+IS F G + + K
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 301 RNFGIEPETRTFNILIGAYGKKRMYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTD 356
+ G P++ T+N LI A+ + + +++ MR +F STY V + D
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHD 177
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 10/167 (5%)
Query: 225 LYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSSMLESTSCKPDVWTMNTIISVF 284
L+ +M+ R ++ NTVT ++ G +AG D +++ M+ S PD+ T N ++
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMV-SDGVPPDIMTYNILLDGL 61
Query: 285 GNMGQID------MMEKWYEKFRNF---GIEPETRTFNILIGAYGKKRMYDKMSTVMEYM 335
G+++ +E ++ F + G++P T+ +I + KK ++ T+ M
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 336 RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTF 382
++ + TYN +I A GD +MR+ D+ T+
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 168
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 63/144 (43%), Gaps = 12/144 (8%)
Query: 332 MEYMRKLQ---FPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFCCLING 388
ME R++ T TY +I+ GD + F +M ++G+ D T+ L++G
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 389 FANAGLFHKVISTVQLAEKFE---------IAENTTFYNAVLSACTKAEDLMEMERVFKR 439
G K + ++ + ++ + N Y ++S K E +F++
Sbjct: 61 LCKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRK 120
Query: 440 MKDNQCPPDDTTYTIMIEAYRKEG 463
MK++ PD TY +I A+ ++G
Sbjct: 121 MKEDGPLPDSGTYNTLIRAHLRDG 144
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 132/327 (40%), Gaps = 24/327 (7%)
Query: 136 MKLIVLLGKSGQPHRARQLFTTMIEEGCDPSPETYTALLAAYCRSNLLDEAFSILNEMKN 195
+ L+ + K+GQ A Q+F + S + L+ YCR+ + A ++ M
Sbjct: 165 LSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMP- 223
Query: 196 HPLCQPDVFTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFD 255
+ + ++STLIK VD+ + + + L+E M + N V+ +++G+ + G ++
Sbjct: 224 ----ERNSGSWSTLIKGYVDSGELNRAKQLFELMPEK----NVVSWTTLINGFSQTGDYE 275
Query: 256 QMEKVLSSMLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNIL 315
MLE KP+ +T+ ++S G + + + + GI+ + L
Sbjct: 276 TAISTYFEMLEK-GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTAL 334
Query: 316 IGAYGKKRMYDKMSTVMEYM-RKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEG 374
+ Y K D +TV M K WT +I+ + G F QM G
Sbjct: 335 VDMYAKCGELDCAATVFSNMNHKDILSWTA-----MIQGWAVHGRFHQAIQCFRQMMYSG 389
Query: 375 MKADSKTFCCLINGFANAG---LFHKVISTVQLAEKFEIAENTTFYNAVLSACTKAEDLM 431
K D F ++ N+ L +++L + I Y V+ +A L
Sbjct: 390 EKPDEVVFLAVLTACLNSSEVDLGLNFFDSMRL--DYAIEPTLKHYVLVVDLLGRAGKLN 447
Query: 432 EMERVFKRMKDNQCPPDDTTYTIMIEA 458
E + + M N PD TT+ + A
Sbjct: 448 EAHELVENMPIN---PDLTTWAALYRA 471
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 114/264 (43%), Gaps = 11/264 (4%)
Query: 204 FTYSTLIKPCVDAFKFDLVELLYEDMAARSIMPNTVTQNIVLSGYGKAGKFDQMEKVLSS 263
F + LI+ + +F+ + M + P+ +T VL K G F + + L +
Sbjct: 92 FVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLG-FRWLGRALHA 150
Query: 264 MLESTSCKPDVWTMNTIISVFGNMGQIDMMEKWYEKFRNFGIEPETRTFNILIGAYGKKR 323
D + +++ ++ GQ+ + +E+ + + +N+LI Y + +
Sbjct: 151 ATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAK 210
Query: 324 MYDKMSTVMEYMRKLQFPWTTSTYNNVIEAFTDVGDAKNMEYTFDQMRAEGMKADSKTFC 383
+T+ M + + +++ +I+ + D G+ + F+ M + + ++
Sbjct: 211 DMHMATTLFRSMPERN----SGSWSTLIKGYVDSGELNRAKQLFELMPEKNVV----SWT 262
Query: 384 CLINGFANAGLFHKVIST-VQLAEKFEIAENTTFYNAVLSACTKAEDLMEMERVFKRMKD 442
LINGF+ G + IST ++ EK + N AVLSAC+K+ L R+ + D
Sbjct: 263 TLINGFSQTGDYETAISTYFEMLEK-GLKPNEYTIAAVLSACSKSGALGSGIRIHGYILD 321
Query: 443 NQCPPDDTTYTIMIEAYRKEGMND 466
N D T +++ Y K G D
Sbjct: 322 NGIKLDRAIGTALVDMYAKCGELD 345