Miyakogusa Predicted Gene

Lj4g3v2249020.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2249020.1 tr|Q2VJ44|Q2VJ44_9ROSA Cold acclimation-induced
protein OS=Morus mongolica PE=2 SV=1,36.25,1e-18,seg,NULL,CUFF.50552.1
         (302 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G44310.1 | Symbols:  | Late embryogenesis abundant protein (L...    56   4e-08
AT5G44310.2 | Symbols:  | Late embryogenesis abundant protein (L...    55   4e-08
AT3G53040.1 | Symbols:  | late embryogenesis abundant protein, p...    53   2e-07

>AT5G44310.1 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr5:17847998-17848885 REVERSE
           LENGTH=295
          Length = 295

 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 16/184 (8%)

Query: 114 ASDTAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYAT-EKTKEYAGGATEK 172
           A +T +K KD A    EKTKDYA +A  K  + A  AA K   Y T EK K+ A    EK
Sbjct: 90  AYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKA--YETKEKAKDKAYDVKEK 147

Query: 173 TKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSKDTAQESKEYAGDAA 232
           TK++A    +++KE   + A +A D A D  +K+K YA    +++KD   E    A D A
Sbjct: 148 TKDFA----EETKEKVNEGASRAADKAYDVKEKTKNYA----EQTKDKVNEGASRAADKA 199

Query: 233 QKIKE-ASSYASDTSQKTKEKLQEVASGASEYSAEKARDMTNAVKDTFEAARQKSQEMKD 291
           ++ K+ A  YA D+    KEK +++A G  E + +      + VKD +E A+  +Q++ +
Sbjct: 200 EETKDKAKDYAEDS----KEKAEDMAHGFKEKAQDIGEKTMDTVKDVWETAKSTAQKVTE 255

Query: 292 SAGG 295
           +  G
Sbjct: 256 AVVG 259


>AT5G44310.2 | Symbols:  | Late embryogenesis abundant protein (LEA)
           family protein | chr5:17847998-17849436 REVERSE
           LENGTH=331
          Length = 331

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 99/184 (53%), Gaps = 16/184 (8%)

Query: 114 ASDTAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYAT-EKTKEYAGGATEK 172
           A +T +K KD A    EKTKDYA +A  K  + A  AA K   Y T EK K+ A    EK
Sbjct: 126 AYETKEKAKDKAYDVKEKTKDYAEEAKDKVNEGASRAADKA--YETKEKAKDKAYDVKEK 183

Query: 173 TKEYAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSKDTAQESKEYAGDAA 232
           TK++A    +++KE   + A +A D A D  +K+K YA    +++KD   E    A D A
Sbjct: 184 TKDFA----EETKEKVNEGASRAADKAYDVKEKTKNYA----EQTKDKVNEGASRAADKA 235

Query: 233 QKIKE-ASSYASDTSQKTKEKLQEVASGASEYSAEKARDMTNAVKDTFEAARQKSQEMKD 291
           ++ K+ A  YA D+    KEK +++A G  E + +      + VKD +E A+  +Q++ +
Sbjct: 236 EETKDKAKDYAEDS----KEKAEDMAHGFKEKAQDIGEKTMDTVKDVWETAKSTAQKVTE 291

Query: 292 SAGG 295
           +  G
Sbjct: 292 AVVG 295


>AT3G53040.1 | Symbols:  | late embryogenesis abundant protein,
           putative / LEA protein, putative |
           chr3:19664797-19666405 REVERSE LENGTH=479
          Length = 479

 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/167 (32%), Positives = 86/167 (51%), Gaps = 20/167 (11%)

Query: 116 DTAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYATEKTKEYAGGATEKTKE 175
           DT  +++D      ++T DY  D A++ KD   D  ++  DYA EK +E      +KTKE
Sbjct: 96  DTTGEVRDSTAQKTKETADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKE 155

Query: 176 YAGDAAQKSKEYAGDAAQKARDTANDAAQKSKEYAGDAAQKSKDTAQES----KEYAGD- 230
            A        EY  + A++A+D   D   + K+Y  + A+++KDT  E     K+Y  D 
Sbjct: 156 TA--------EYTAEKAREAKDKTADKLGEYKDYTAEKAKEAKDTTAEKLGEYKDYTVDK 207

Query: 231 -------AAQKIKEASSYASDTSQKTKEKLQEVASGASEYSAEKARD 270
                   A+K KE + Y SD +++TK+K  E      +Y+AEKA++
Sbjct: 208 AKEAKDKTAEKAKETAEYTSDKARETKDKTAEKVGEYKDYTAEKAKE 254



 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 101/198 (51%), Gaps = 26/198 (13%)

Query: 111 SEYASDTAQKIKDYATGSAEKTKDYAGDAAQKTKDYAGDAAQKPTDYATEKTKEYAGGAT 170
           ++Y +D A++ KD      ++T DYA + A++ KD   D  ++  +Y  EK +E      
Sbjct: 113 ADYTADKAREAKDKTADKTKETADYAAEKAREAKDRTADKTKETAEYTAEKAREAKDKTA 172

Query: 171 EKTKEYAGDAAQKSKE--------------YAGDAAQKARDTANDAAQKSKEYAGDAAQK 216
           +K  EY    A+K+KE              Y  D A++A+D   + A+++ EY  D A++
Sbjct: 173 DKLGEYKDYTAEKAKEAKDTTAEKLGEYKDYTVDKAKEAKDKTAEKAKETAEYTSDKARE 232

Query: 217 SKD-TAQESKEYAGDAAQKIKEASSYASDTSQKTKEKLQEVASGASEYSAEKARDMTNAV 275
           +KD TA++  EY    A+K KE +  A +   KT EK+ E      +Y+AEKA       
Sbjct: 233 TKDKTAEKVGEYKDYTAEKAKETADKAREAKDKTAEKVGEY----RDYTAEKA------- 281

Query: 276 KDTFEAARQKSQEMKDSA 293
            +T +A   K  E+KDSA
Sbjct: 282 TETKDAGVSKIGELKDSA 299