Miyakogusa Predicted Gene
- Lj4g3v2227950.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2227950.1 Non Chatacterized Hit- tr|D8SEH4|D8SEH4_SELML
Putative uncharacterized protein PGP4A-2
OS=Selaginell,29.08,0.0000000007,no description,NULL; ABC transporter
transmembrane region,ABC transporter, transmembrane domain,
typ,NODE_84753_length_458_cov_8.746725.path2.1
(159 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 | chr1:524134-5... 185 1e-47
AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 | chr1:529836-5... 179 6e-46
AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 | chr4:7807... 179 6e-46
AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755... 177 3e-45
AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding c... 171 2e-43
AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790... 167 3e-42
AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-... 155 7e-39
AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192-... 148 2e-36
AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPG... 134 3e-32
AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-1... 119 6e-28
AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 | chr1:3538470-... 116 7e-27
AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassett... 108 2e-24
AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 | chr1:9733597-... 101 2e-22
AT3G28345.1 | Symbols: | ABC transporter family protein | chr3:... 100 8e-22
AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 | chr3:10623742... 99 9e-22
AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 | chr3:2050739... 99 2e-21
AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 | chr2:16478249-1... 94 6e-20
AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein ... 92 2e-19
AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 | chr3:10611071... 90 6e-19
AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 | chr3:10629425... 88 3e-18
AT3G28415.1 | Symbols: | ABC transporter family protein | chr3:... 72 2e-13
>AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 |
chr1:524134-528745 FORWARD LENGTH=1278
Length = 1278
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/123 (69%), Positives = 101/123 (82%)
Query: 37 NTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVDE 96
NTVP YKLF+FAD D LLM G++GAIGNG+S+P MTL+FG +I++FG + N KD+VD
Sbjct: 39 NTVPFYKLFAFADSSDVLLMICGSIGAIGNGMSLPFMTLLFGDLIDSFGKNQNNKDIVDV 98
Query: 97 VSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTG 156
VSKV LKFVYL GT A+ LQ++CWMITGERQAARIR YL+TILRQD+ FFD ETNTG
Sbjct: 99 VSKVCLKFVYLGLGTLGAAFLQVACWMITGERQAARIRSTYLKTILRQDIGFFDVETNTG 158
Query: 157 EVV 159
EVV
Sbjct: 159 EVV 161
>AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 |
chr1:529836-534542 FORWARD LENGTH=1273
Length = 1273
Score = 179 bits (455), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 82/123 (66%), Positives = 99/123 (80%)
Query: 37 NTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVDE 96
TVPLYKLF+FAD D LM G++GAIGNG+ +PLMTL+FG +I++FG + N KD+VD
Sbjct: 26 KTVPLYKLFAFADSFDVFLMICGSLGAIGNGVCLPLMTLLFGDLIDSFGKNQNNKDIVDV 85
Query: 97 VSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTG 156
VSKV LKFVYL G A+ LQ++CWMITGERQAA+IR YL+TILRQD+ FFD ETNTG
Sbjct: 86 VSKVCLKFVYLGLGRLGAAFLQVACWMITGERQAAKIRSNYLKTILRQDIGFFDVETNTG 145
Query: 157 EVV 159
EVV
Sbjct: 146 EVV 148
>AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 |
chr4:780734-785329 REVERSE LENGTH=1229
Length = 1229
Score = 179 bits (455), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/124 (66%), Positives = 101/124 (81%)
Query: 36 TNTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVD 95
T TVP YKLFSF+D D LLM VG++GAIGNG+ PLMTL+FG +I++ G + + KD+V+
Sbjct: 5 TKTVPFYKLFSFSDSTDVLLMIVGSIGAIGNGVGFPLMTLLFGDLIDSIGQNQSNKDIVE 64
Query: 96 EVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNT 155
VSKV LKFVYL GT A+ LQ++CWMITGERQAARIR LYL+TILRQD+ FFD ET+T
Sbjct: 65 IVSKVCLKFVYLGLGTLGAAFLQVACWMITGERQAARIRSLYLKTILRQDIGFFDVETST 124
Query: 156 GEVV 159
GEVV
Sbjct: 125 GEVV 128
>AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 |
chr3:23008755-23013579 REVERSE LENGTH=1296
Length = 1296
Score = 177 bits (449), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 79/124 (63%), Positives = 102/124 (82%)
Query: 36 TNTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVD 95
T TVP +KLF+FAD D +LM +GT+GA+GNG+ P+MT++FG +I+ FG + N+ DV D
Sbjct: 60 TKTVPFHKLFAFADSFDIILMILGTIGAVGNGLGFPIMTILFGDVIDVFGQNQNSSDVSD 119
Query: 96 EVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNT 155
+++KV+LKFVYL GT A+LLQ+S WMI+GERQA RIR LYLQTILRQD++FFD ETNT
Sbjct: 120 KIAKVALKFVYLGLGTLVAALLQVSGWMISGERQAGRIRSLYLQTILRQDIAFFDVETNT 179
Query: 156 GEVV 159
GEVV
Sbjct: 180 GEVV 183
>AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding
cassette subfamily B4 | chr2:19310008-19314750 REVERSE
LENGTH=1286
Length = 1286
Score = 171 bits (433), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/122 (67%), Positives = 101/122 (82%), Gaps = 2/122 (1%)
Query: 38 TVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVDEV 97
TVP YKLF+FAD D LLM +GT+G+IGNG+ PLMTL+FG +I+AFG+ N + D+V
Sbjct: 45 TVPFYKLFAFADSFDFLLMILGTLGSIGNGLGFPLMTLLFGDLIDAFGE--NQTNTTDKV 102
Query: 98 SKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTGE 157
SKV+LKFV+L GTF A+ LQLS WMI+GERQAARIR LYL+TILRQD++FFD +TNTGE
Sbjct: 103 SKVALKFVWLGIGTFAAAFLQLSGWMISGERQAARIRSLYLKTILRQDIAFFDIDTNTGE 162
Query: 158 VV 159
VV
Sbjct: 163 VV 164
>AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790447
REVERSE LENGTH=1230
Length = 1230
Score = 167 bits (422), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 94/124 (75%)
Query: 36 TNTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVD 95
T TVP YKLF F+D D LLM VG++GAI NG+ PLMTL+FG +I+A G + N +++V+
Sbjct: 10 TKTVPFYKLFFFSDSTDVLLMIVGSIGAIANGVCSPLMTLLFGELIDAMGPNQNNEEIVE 69
Query: 96 EVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNT 155
VSKV L VYL G A+ LQ++CWMITGERQAARIR LYL+TILRQD+ FFD E T
Sbjct: 70 RVSKVCLSLVYLGLGALGAAFLQVACWMITGERQAARIRSLYLKTILRQDIGFFDVEMTT 129
Query: 156 GEVV 159
GEVV
Sbjct: 130 GEVV 133
>AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 |
chr4:10022205-10027280 FORWARD LENGTH=1236
Length = 1236
Score = 155 bits (393), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 73/121 (60%), Positives = 95/121 (78%), Gaps = 1/121 (0%)
Query: 39 VPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVDEVS 98
V +KLFSFAD D +LM VGT+ A GNG++ P MTLIFG +INAFG +++ +V EV
Sbjct: 16 VSFFKLFSFADKTDVVLMTVGTIAAAGNGLTQPFMTLIFGQLINAFG-TTDPDHMVREVW 74
Query: 99 KVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTGEV 158
KV++KF+YLA + + LQ+SCWM+TGERQ+A IRGLYL+TILRQD+ +FD ETNTGEV
Sbjct: 75 KVAVKFIYLAVYSCVVAFLQVSCWMVTGERQSATIRGLYLKTILRQDIGYFDTETNTGEV 134
Query: 159 V 159
+
Sbjct: 135 I 135
>AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 |
chr5:18877192-18882347 REVERSE LENGTH=1248
Length = 1248
Score = 148 bits (373), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 69/121 (57%), Positives = 91/121 (75%), Gaps = 1/121 (0%)
Query: 39 VPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVDEVS 98
+ YKLF+FAD D +LM +GT+ A+ NG++ P M+++ G +IN FG S+ V EVS
Sbjct: 18 IAFYKLFTFADRYDIVLMVIGTLSAMANGLTQPFMSILMGQLINVFG-FSDHDHVFKEVS 76
Query: 99 KVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTGEV 158
KV++KF+YLAA S LQ+SCWM+TGERQ+ RIR LYL+TILRQD+ FFD ETNTGEV
Sbjct: 77 KVAVKFLYLAAYAGVVSFLQVSCWMVTGERQSTRIRRLYLKTILRQDIGFFDTETNTGEV 136
Query: 159 V 159
+
Sbjct: 137 I 137
>AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1,
ATPGP19, ABCB19, ATABCB19 | ATP binding cassette
subfamily B19 | chr3:10870287-10877286 REVERSE
LENGTH=1252
Length = 1252
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 1/124 (0%)
Query: 37 NTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDVVD 95
++P +KLFSFAD D LLMFVG++GAI +G SMP+ L+FG M+N FG + + +V
Sbjct: 22 QSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFLLFGQMVNGFGKNQMDLHQMVH 81
Query: 96 EVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNT 155
EVS+ SL FVYL F+S +++CWM +GERQ A +R YL+ +L+QDV FFD + T
Sbjct: 82 EVSRYSLYFVYLGLVVCFSSYAEIACWMYSGERQVAALRKKYLEAVLKQDVGFFDTDART 141
Query: 156 GEVV 159
G++V
Sbjct: 142 GDIV 145
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 6/121 (4%)
Query: 41 LYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSSNTKDVVDEVSKV 100
Y+L P + +G VG+I +G P ++ +MI F D ++ +K
Sbjct: 673 FYRLLKLNSP-EWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVF--YYTDYDSMERKTKE 729
Query: 101 SLKFVYLAAGTFF--ASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTGEV 158
+ F+Y+ AG + A L+Q + I GE R+R + L ILR +V +FD++ + +
Sbjct: 730 YV-FIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFDEDEHNSSL 788
Query: 159 V 159
+
Sbjct: 789 I 789
>AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 |
chr4:13177438-13183425 FORWARD LENGTH=1273
Length = 1273
Score = 119 bits (299), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 84/126 (66%), Gaps = 1/126 (0%)
Query: 35 TTNTVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDV 93
T V L KLFSFAD D +LM +G+VGA +G S+P+ + FG +IN G + K
Sbjct: 56 TQPKVSLLKLFSFADFYDCVLMTLGSVGACIHGASVPIFFIFFGKLINIIGLAYLFPKQA 115
Query: 94 VDEVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKET 153
V+K SL FVYL+ F+S L+++CWM TGERQAA++R YL+++L QD+S FD E
Sbjct: 116 SHRVAKYSLDFVYLSVAILFSSWLEVACWMHTGERQAAKMRRAYLRSMLSQDISLFDTEA 175
Query: 154 NTGEVV 159
+TGEV+
Sbjct: 176 STGEVI 181
>AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 |
chr1:3538470-3543782 REVERSE LENGTH=1227
Length = 1227
Score = 116 bits (290), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Query: 38 TVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDVVDE 96
+V KLFSFAD D +LM +G++GA +G S+P+ + FG +IN G + ++ +
Sbjct: 23 SVSFLKLFSFADFYDCVLMALGSIGACIHGASVPVFFIFFGKLINIIGLAYLFPQEASHK 82
Query: 97 VSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTG 156
V+K SL FVYL+ F+S L+++CWM TGERQAA+IR YL+++L QD+S FD E +TG
Sbjct: 83 VAKYSLDFVYLSVVILFSSWLEVACWMHTGERQAAKIRKAYLRSMLSQDISLFDTEISTG 142
Query: 157 EVV 159
EV+
Sbjct: 143 EVI 145
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 43 KLFSFADPLDQLLMFVGTVGAIGNGISMPLMTL-IFGSMINAFGDSSNTKDVVDEVSKVS 101
+L+S P D GT+G+ G MPL L I ++++ + D T++ EV ++S
Sbjct: 650 RLYSMIRP-DWKYGLCGTLGSFIAGSQMPLFALGIAQALVSYYMDWETTQN---EVKRIS 705
Query: 102 LKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNT 155
+ F + T ++ + + I GER R+R ILR ++ +FDK NT
Sbjct: 706 ILFCCGSVITVIVHTIEHTTFGIMGERLTLRVRQKMFSAILRNEIGWFDKVDNT 759
>AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette
subfamily B1 | chr2:15502162-15507050 FORWARD
LENGTH=1286
Length = 1286
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
Query: 39 VPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFG-DSSNTKDVVDEV 97
V +LF FAD LD +LM +G+VGA +G S+PL F ++N+FG +S+N + +++EV
Sbjct: 27 VAFKELFRFADGLDYVLMGIGSVGAFVHGCSLPLFLRFFADLVNSFGSNSNNVEKMMEEV 86
Query: 98 SKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTGE 157
K +L F+ + A + +S ++SCWM +GERQ ++R YL+ L QD+ FFD E T +
Sbjct: 87 LKYALYFLVVGAAIWASSWAEISCWMWSGERQTTKMRIKYLEAALNQDIQFFDTEVRTSD 146
Query: 158 VV 159
VV
Sbjct: 147 VV 148
>AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 |
chr1:9733597-9738129 REVERSE LENGTH=1245
Length = 1245
Score = 101 bits (251), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 79/123 (64%), Gaps = 1/123 (0%)
Query: 38 TVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGD-SSNTKDVVDE 96
+V L LFS AD LD LM +G +GA +G ++PL + FG M+++ G+ S++ K +
Sbjct: 29 SVSLMGLFSAADKLDYFLMLLGGLGACIHGATLPLFFVFFGKMLDSLGNLSTDPKAISSR 88
Query: 97 VSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETNTG 156
VS+ +L VYL F ++ + +SCWM TGERQ AR+R YL++IL +D++FFD E
Sbjct: 89 VSQNALYLVYLGLVNFVSAWIGVSCWMQTGERQTARLRINYLKSILAKDITFFDTEARDS 148
Query: 157 EVV 159
++
Sbjct: 149 NLI 151
>AT3G28345.1 | Symbols: | ABC transporter family protein |
chr3:10593921-10598775 REVERSE LENGTH=1240
Length = 1240
Score = 99.8 bits (247), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 2/118 (1%)
Query: 44 LFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDVVDEVSKVSL 102
+F AD +D LLM +G +GA+G+G + PL+ LI ++N G SS NT + +SK S+
Sbjct: 23 IFMHADGVDWLLMGLGLIGAVGDGFTTPLVLLITSKLMNNIGGSSFNTDTFMQSISKNSV 82
Query: 103 KFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE-TNTGEVV 159
+Y+A G++ L+ CW TGERQ AR+R YL+ +LRQDV +FD T+T +V+
Sbjct: 83 ALLYVACGSWVVCFLEGYCWTRTGERQTARMREKYLRAVLRQDVGYFDLHVTSTSDVI 140
>AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 |
chr3:10623742-10628201 REVERSE LENGTH=1240
Length = 1240
Score = 99.4 bits (246), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 77/121 (63%), Gaps = 2/121 (1%)
Query: 41 LYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFG-DSSNTKDVVDEVSK 99
+ +F AD +D +LM +G +GA+G+G P++ IF +++N G SSN K + +SK
Sbjct: 20 IRSIFMHADGVDWILMALGLIGAVGDGFITPVVVFIFNTLLNNLGTSSSNNKTFMQTISK 79
Query: 100 VSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE-TNTGEV 158
+ +Y+A G++ L+ CW TGERQAAR+R YL+ +LRQDV +FD T+T +V
Sbjct: 80 NVVALLYVACGSWVICFLEGYCWTRTGERQAARMREKYLRAVLRQDVGYFDLHVTSTSDV 139
Query: 159 V 159
+
Sbjct: 140 I 140
>AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 |
chr3:20507391-20513393 REVERSE LENGTH=1408
Length = 1408
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 79/127 (62%), Gaps = 5/127 (3%)
Query: 38 TVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMIN--AFGDSSN---TKD 92
VP +LF+ AD D +LM VG+V A +G ++ + F +++ AF + S+ ++
Sbjct: 70 AVPFSQLFACADRFDWVLMIVGSVAAAAHGTALIVYLHYFAKIVDVLAFSNDSSQQRSEH 129
Query: 93 VVDEVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE 152
D + ++SL VY+A G F + +++SCW++TGERQ A IR Y+Q +L QD+SFFD
Sbjct: 130 QFDRLVQLSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTY 189
Query: 153 TNTGEVV 159
N G++V
Sbjct: 190 GNNGDIV 196
>AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 |
chr2:16478249-16484827 REVERSE LENGTH=1407
Length = 1407
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 38 TVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMIN--AFGDSSN---TKD 92
VP +LF+ AD D +LM G+V A +G ++ + F ++ AF S+ + D
Sbjct: 68 AVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLAFPTDSDHLISDD 127
Query: 93 VVDEVSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE 152
+ + ++SL VY+A G F + +++SCW++TGERQ A IR Y+Q +L QD+SFFD
Sbjct: 128 QFNRLLELSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLNQDMSFFDTY 187
Query: 153 TNTGEVV 159
N G++V
Sbjct: 188 GNNGDIV 194
>AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein 14
| chr1:9763436-9767917 FORWARD LENGTH=1247
Length = 1247
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 47/118 (39%), Positives = 74/118 (62%), Gaps = 1/118 (0%)
Query: 38 TVPLYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGD-SSNTKDVVDE 96
+V L LFS AD +D LMF+G +G +G ++PL + FG M+++ G S++ +
Sbjct: 30 SVSLMGLFSAADNVDYFLMFLGGLGTCIHGGTLPLFFVFFGGMLDSLGKLSTDPNAISSR 89
Query: 97 VSKVSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKETN 154
VS+ +L VYL ++ + ++CWM TGERQ AR+R YL++IL +D++FFD E
Sbjct: 90 VSQNALYLVYLGLVNLVSAWIGVACWMQTGERQTARLRINYLKSILAKDITFFDTEAR 147
>AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 |
chr3:10611071-10616301 REVERSE LENGTH=1228
Length = 1228
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 41 LYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDVVDEVSK 99
+ +F AD +D +LM +G +GA+G+G P++ I ++N FG S N + + +SK
Sbjct: 7 MRSIFMHADGVDWMLMGLGLIGAVGDGFITPILFFITAMLLNDFGSFSFNDETFMQPISK 66
Query: 100 VSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE-TNTGEV 158
+L +Y+A ++ L+ CW TGERQAA++R YL+ +LRQDV +FD T+T ++
Sbjct: 67 NALAMLYVACASWVICFLEGYCWTRTGERQAAKMRERYLRAVLRQDVGYFDLHVTSTSDI 126
Query: 159 V 159
+
Sbjct: 127 I 127
>AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 |
chr3:10629425-10633967 REVERSE LENGTH=1225
Length = 1225
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 75/121 (61%), Gaps = 2/121 (1%)
Query: 41 LYKLFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDVVDEVSK 99
+ +F AD +D +LM +G +GA+G+G P++ I ++N G SS + + + V+K
Sbjct: 8 IRSIFMHADGVDWMLMALGLIGAVGDGFITPIIFFICSKLLNNVGGSSFDDETFMQTVAK 67
Query: 100 VSLKFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE-TNTGEV 158
++ VY+A ++ ++ CW TGERQAA++R YL+ +LRQDV +FD T+T +V
Sbjct: 68 NAVALVYVACASWVICFIEGYCWTRTGERQAAKMREKYLKAVLRQDVGYFDLHVTSTSDV 127
Query: 159 V 159
+
Sbjct: 128 I 128
>AT3G28415.1 | Symbols: | ABC transporter family protein |
chr3:10647123-10651540 REVERSE LENGTH=1221
Length = 1221
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 10/118 (8%)
Query: 44 LFSFADPLDQLLMFVGTVGAIGNGISMPLMTLIFGSMINAFGDSS-NTKDVVDEVSKVSL 102
+F A+ +D +LM +G +GA+G+G P++ I G ++N GDSS K + + K ++
Sbjct: 10 IFMHANSVDLVLMGLGLIGAVGDGFITPIIFFITGLLLNDIGDSSFGDKTFMHAIMKNAV 69
Query: 103 KFVYLAAGTFFASLLQLSCWMITGERQAARIRGLYLQTILRQDVSFFDKE-TNTGEVV 159
+Y+A + + C++ GERQA+R+R YL+ +LRQDV +FD T+T +V+
Sbjct: 70 ALLYVAGASL------VICFV--GERQASRMREKYLRAVLRQDVGYFDLHVTSTSDVI 119