Miyakogusa Predicted Gene
- Lj4g3v2227880.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2227880.1 tr|Q94IH6|Q94IH6_COPJA CjMDR1 OS=Coptis japonica
GN=Cjmdr1 PE=2 SV=1,33.87,4e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
FAMILY NOT NAMED,NULL; ABC_TM1F,ABC transporter, integral
membra,CUFF.50730.1
(263 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 | chr1:524134-5... 232 2e-61
AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 | chr1:529836-5... 232 2e-61
AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding c... 226 1e-59
AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755... 217 8e-57
AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790... 211 5e-55
AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-... 210 8e-55
AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192-... 202 2e-52
AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 | chr4:7807... 199 2e-51
AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPG... 124 8e-29
AT3G28345.1 | Symbols: | ABC transporter family protein | chr3:... 124 1e-28
AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 | chr3:10611071... 119 2e-27
AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 | chr3:10623742... 119 2e-27
AT3G28415.1 | Symbols: | ABC transporter family protein | chr3:... 117 8e-27
AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 | chr3:10629425... 112 3e-25
AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 | chr1:9733597-... 107 6e-24
AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-1... 105 4e-23
AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein ... 100 1e-21
AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 | chr2:16478249-1... 100 2e-21
AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassett... 99 3e-21
AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 | chr3:2050739... 98 7e-21
AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 | chr1:3538470-... 96 3e-20
AT5G39040.1 | Symbols: ALS1, ATTAP2, TAP2 | transporter associat... 55 3e-08
AT1G70610.1 | Symbols: ATTAP1, TAP1 | transporter associated wit... 53 2e-07
AT2G47800.1 | Symbols: ATMRP4, EST3, MRP4, ABCC4 | multidrug res... 49 5e-06
>AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 |
chr1:524134-528745 FORWARD LENGTH=1278
Length = 1278
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 149/234 (63%), Gaps = 15/234 (6%)
Query: 42 VGNSGRH---------------SFSEPTSGGPKAPPSTVSSPKVPLYRLAYLNKPEIPVL 86
VGNS RH S S+ S PKV L R+A LNKPEIPVL
Sbjct: 651 VGNSSRHHSLNVLGLTTGLDLGSHSQRAGQDETGTASQEPLPKVSLTRIAALNKPEIPVL 710
Query: 87 LLGTITAVVNGALLPIFGLLLSKMISIFYEPADELRKDSKVWALVFVALGLVSFLIIPCR 146
LLGT+ A +NGA+ P+FG+L+S++I F++PA EL++DS+ WA++FVALG+ S ++ P +
Sbjct: 711 LLGTVAAAINGAIFPLFGILISRVIEAFFKPAHELKRDSRFWAIIFVALGVTSLIVSPTQ 770
Query: 147 SYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDAL 206
Y F VAGGKLI+R+R MCFEK VHME++WFDE +SSG +GARLS DA +R LVGDAL
Sbjct: 771 MYLFAVAGGKLIRRIRSMCFEKAVHMEVAWFDEPQNSSGTMGARLSADATLIRALVGDAL 830
Query: 207 GLLVQHIATAITGLVIAFVACWQXXXXXXXXXXXXXXXXXXXXXXXQGFSADAK 260
L VQ++A+A +GL+IAF A W+ +GFSADAK
Sbjct: 831 SLAVQNVASAASGLIIAFTASWELALIILVMLPLIGINGFVQVKFMKGFSADAK 884
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 70 VPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELRKD---- 124
VP Y+L A+ + ++ +++ G+I A+ NG LP LL +I F + ++ KD
Sbjct: 41 VPFYKLFAFADSSDVLLMICGSIGAIGNGMSLPFMTLLFGDLIDSFGK--NQNNKDIVDV 98
Query: 125 -SKVWALVFVALGL----VSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDE 179
SKV L FV LGL +FL + C + + G + R+R + I+ +I +FD
Sbjct: 99 VSKV-CLKFVYLGLGTLGAAFLQVAC----WMITGERQAARIRSTYLKTILRQDIGFFD- 152
Query: 180 ADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
+ ++G + R+S D ++ +G+ +G +Q ++T + G V+AF+ W
Sbjct: 153 VETNTGEVVGRMSGDTVLIQDAMGEKVGKFIQLVSTFVGGFVLAFIKGW 201
>AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 |
chr1:529836-534542 FORWARD LENGTH=1273
Length = 1273
Score = 232 bits (591), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 146/206 (70%), Gaps = 2/206 (0%)
Query: 57 GPKAPPSTVSSP--KVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIF 114
G + +T P KV L R+A LNKPEIPVLLLGT+ A +NGA+ P+FG+L+S++I F
Sbjct: 674 GQEETGTTSQEPLRKVSLTRIAALNKPEIPVLLLGTVVAAINGAIFPLFGILISRVIEAF 733
Query: 115 YEPADELRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEI 174
++PAD+L+KDS+ WA++FVALG+ S ++ P + Y F VAGGKLI+R++ MCFEK VHME+
Sbjct: 734 FKPADQLKKDSRFWAIIFVALGVTSLIVSPSQMYLFAVAGGKLIRRIQSMCFEKAVHMEV 793
Query: 175 SWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQXXXXX 234
SWFDE ++SSG +GARLSTDAA +R LVGDAL L VQ+ A+A +GL+IAF A W+
Sbjct: 794 SWFDEPENSSGTMGARLSTDAALIRALVGDALSLAVQNAASAASGLIIAFTASWELALII 853
Query: 235 XXXXXXXXXXXXXXXXXXQGFSADAK 260
+GFSADAK
Sbjct: 854 LVMLPLIGINGFLQVKFMKGFSADAK 879
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 90/169 (53%), Gaps = 18/169 (10%)
Query: 70 VPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELRKD---- 124
VPLY+L A+ + ++ +++ G++ A+ NG LP+ LL +I F + ++ KD
Sbjct: 28 VPLYKLFAFADSFDVFLMICGSLGAIGNGVCLPLMTLLFGDLIDSFGK--NQNNKDIVDV 85
Query: 125 -SKVWALVFVALGL----VSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDE 179
SKV L FV LGL +FL + C + + G + ++R + I+ +I +FD
Sbjct: 86 VSKV-CLKFVYLGLGRLGAAFLQVAC----WMITGERQAAKIRSNYLKTILRQDIGFFD- 139
Query: 180 ADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
+ ++G + R+S D ++ +G+ +G +Q ++T + G +AF W
Sbjct: 140 VETNTGEVVGRMSGDTVHIQDAMGEKVGKFIQLVSTFVGGFALAFAKGW 188
>AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding
cassette subfamily B4 | chr2:19310008-19314750 REVERSE
LENGTH=1286
Length = 1286
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 151/235 (64%), Gaps = 22/235 (9%)
Query: 43 GNSGRHSFS-----------------EPTSGGPKAPPSTVSSPKVPLYRLAYLNKPEIPV 85
GNS RHSF+ E + PK P KV ++R+A LNKPEIPV
Sbjct: 665 GNSSRHSFNMFGFPAGIDGNVVQDQEEDDTTQPKTEP-----KKVSIFRIAALNKPEIPV 719
Query: 86 LLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELRKDSKVWALVFVALGLVSFLIIPC 145
L+LG+I+A NG +LPIFG+L+S +I F++P +L++D+ WA++F+ LG S + P
Sbjct: 720 LILGSISAAANGVILPIFGILISSVIKAFFQPPKKLKEDTSFWAIIFMVLGFASIIAYPA 779
Query: 146 RSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDA 205
+++FF +AG KL++R+R MCFEK+VHME+ WFDE ++SSG +GARLS DAA++RGLVGD+
Sbjct: 780 QTFFFAIAGCKLVQRIRSMCFEKVVHMEVGWFDEPENSSGTIGARLSADAATIRGLVGDS 839
Query: 206 LGLLVQHIATAITGLVIAFVACWQXXXXXXXXXXXXXXXXXXXXXXXQGFSADAK 260
L VQ++++ + GL+IAF+ACWQ +GFSADAK
Sbjct: 840 LAQTVQNLSSILAGLIIAFLACWQLAFVVLAMLPLIALNGFLYMKFMKGFSADAK 894
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 4/161 (2%)
Query: 70 VPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYE-PADELRKDSKV 127
VP Y+L A+ + + +++LGT+ ++ NG P+ LL +I F E + K SKV
Sbjct: 46 VPFYKLFAFADSFDFLLMILGTLGSIGNGLGFPLMTLLFGDLIDAFGENQTNTTDKVSKV 105
Query: 128 WALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGAL 187
AL FV LG+ +F + + ++G + R+R + + I+ +I++FD D ++G +
Sbjct: 106 -ALKFVWLGIGTFAAAFLQLSGWMISGERQAARIRSLYLKTILRQDIAFFD-IDTNTGEV 163
Query: 188 GARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
R+S D ++ +G+ +G +Q +AT + G VIAFV W
Sbjct: 164 VGRMSGDTVLIQDAMGEKVGKAIQLLATFVGGFVIAFVRGW 204
>AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 |
chr3:23008755-23013579 REVERSE LENGTH=1296
Length = 1296
Score = 217 bits (552), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 141/200 (70%), Gaps = 4/200 (2%)
Query: 65 VSSP----KVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADE 120
VS+P KV +R+A LNKPEIP+L+LG+I AV+NG +LPIFG+L+S +I F++P ++
Sbjct: 705 VSTPIKEKKVSFFRVAALNKPEIPMLILGSIAAVLNGVILPIFGILISSVIKAFFKPPEQ 764
Query: 121 LRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEA 180
L+ D++ WA++F+ LG+ S ++ P ++ FF +AG KL++R+R MCFEK+V ME+ WFDE
Sbjct: 765 LKSDTRFWAIIFMLLGVASMVVFPAQTIFFSIAGCKLVQRIRSMCFEKVVRMEVGWFDET 824
Query: 181 DHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQXXXXXXXXXXX 240
++SSGA+GARLS DAA+VRGLVGDAL VQ++A+ GLVIAFVA WQ
Sbjct: 825 ENSSGAIGARLSADAATVRGLVGDALAQTVQNLASVTAGLVIAFVASWQLAFIVLAMLPL 884
Query: 241 XXXXXXXXXXXXQGFSADAK 260
GFSADAK
Sbjct: 885 IGLNGYIYMKFMVGFSADAK 904
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 92/166 (55%), Gaps = 6/166 (3%)
Query: 67 SPKVPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIF---YEPADELR 122
+ VP ++L A+ + +I +++LGTI AV NG PI +L +I +F +D
Sbjct: 60 TKTVPFHKLFAFADSFDIILMILGTIGAVGNGLGFPIMTILFGDVIDVFGQNQNSSDVSD 119
Query: 123 KDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADH 182
K +KV AL FV LGL + + + + ++G + R+R + + I+ +I++FD +
Sbjct: 120 KIAKV-ALKFVYLGLGTLVAALLQVSGWMISGERQAGRIRSLYLQTILRQDIAFFD-VET 177
Query: 183 SSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
++G + R+S D ++ +G+ +G +Q ++T I G VIAF W
Sbjct: 178 NTGEVVGRMSGDTVLIQDAMGEKVGKAIQLVSTFIGGFVIAFTEGW 223
>AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790447
REVERSE LENGTH=1230
Length = 1230
Score = 211 bits (536), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 137/206 (66%)
Query: 55 SGGPKAPPSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIF 114
+G S S KV R+A LNKPEIP+L+LGT+ VNG + PIFG+L +K+I F
Sbjct: 632 AGQDSTKMSQELSQKVSFTRIAALNKPEIPILILGTLVGAVNGTIFPIFGILFAKVIEAF 691
Query: 115 YEPADELRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEI 174
++ EL++DS+ W+++FV LG+ + ++ P +Y F +AGG+LI+R+R MCFEK+VHME+
Sbjct: 692 FKAPHELKRDSRFWSMIFVLLGVAAVIVYPTTNYLFAIAGGRLIRRIRSMCFEKVVHMEV 751
Query: 175 SWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQXXXXX 234
WFDE +SSGA+GARLS DAA +R LVGD+L L V+++A+ +TGL+IAF A W+
Sbjct: 752 GWFDEPGNSSGAMGARLSADAALIRTLVGDSLCLSVKNVASLVTGLIIAFTASWEVAIII 811
Query: 235 XXXXXXXXXXXXXXXXXXQGFSADAK 260
+GFSADAK
Sbjct: 812 LVIIPFIGINGYIQIKFMKGFSADAK 837
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 94/170 (55%), Gaps = 12/170 (7%)
Query: 66 SSPKVPLYRLAYL-NKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIF--YEPADEL- 121
++ VP Y+L + + ++ ++++G+I A+ NG P+ LL ++I + +E+
Sbjct: 9 NTKTVPFYKLFFFSDSTDVLLMIVGSIGAIANGVCSPLMTLLFGELIDAMGPNQNNEEIV 68
Query: 122 RKDSKV-WALVFVALGLV--SFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFD 178
+ SKV +LV++ LG + +FL + C + + G + R+R + + I+ +I +FD
Sbjct: 69 ERVSKVCLSLVYLGLGALGAAFLQVAC----WMITGERQAARIRSLYLKTILRQDIGFFD 124
Query: 179 EADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
+ ++G + R+S D + +G+ +G +Q I+T + G VIAF+ W
Sbjct: 125 -VEMTTGEVVGRMSGDTVLILDAMGEKVGKFIQLISTFVGGFVIAFLRGW 173
>AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 |
chr4:10022205-10027280 FORWARD LENGTH=1236
Length = 1236
Score = 210 bits (535), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 105/198 (53%), Positives = 131/198 (66%), Gaps = 15/198 (7%)
Query: 63 STVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELR 122
+ V KV L RLA+LNKPEIPVL+LG+I A+V+G + PIFGLLLS I++FYEPA L+
Sbjct: 663 NNVRHKKVSLKRLAHLNKPEIPVLVLGSIAAMVHGTVFPIFGLLLSSSINMFYEPAKILK 722
Query: 123 KDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADH 182
KDS WAL+++ALGL +F++IP ++YFFG+AGGKLIKR+R MCF+K+VH EISWFD
Sbjct: 723 KDSHFWALIYIALGLTNFVMIPVQNYFFGIAGGKLIKRIRSMCFDKVVHQEISWFD---- 778
Query: 183 SSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQXXXXXXXXXXXXX 242
D A+ R LVGDAL L+VQ+IAT TGL+IAF A W
Sbjct: 779 -----------DTANSRSLVGDALALIVQNIATVTTGLIIAFTANWILALIVLALSPFIV 827
Query: 243 XXXXXXXXXXQGFSADAK 260
GFSADAK
Sbjct: 828 IQGYAQTKFLTGFSADAK 845
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 87/165 (52%), Gaps = 13/165 (7%)
Query: 67 SPKVPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIF--YEPADELRK 123
+ KV ++L ++ +K ++ ++ +GTI A NG P L+ ++I+ F +P +R+
Sbjct: 13 NQKVSFFKLFSFADKTDVVLMTVGTIAAAGNGLTQPFMTLIFGQLINAFGTTDPDHMVRE 72
Query: 124 DSKVWALVFVALG----LVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDE 179
KV A+ F+ L +V+FL + C + V G + +R + + I+ +I +FD
Sbjct: 73 VWKV-AVKFIYLAVYSCVVAFLQVSC----WMVTGERQSATIRGLYLKTILRQDIGYFD- 126
Query: 180 ADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAF 224
+ ++G + R+S D ++ +G+ +G Q + T + G IAF
Sbjct: 127 TETNTGEVIGRMSGDTILIQDAMGEKVGKFTQLLCTFLGGFAIAF 171
>AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 |
chr5:18877192-18882347 REVERSE LENGTH=1248
Length = 1248
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 88/160 (55%), Positives = 127/160 (79%)
Query: 69 KVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELRKDSKVW 128
+V L RLA+LNKPEI VLLLG++ AV++G + P+ GLLLS+ I IF+EP+++L+ DS W
Sbjct: 666 EVSLRRLAHLNKPEISVLLLGSLAAVIHGIVFPVQGLLLSRTIRIFFEPSNKLKNDSLFW 725
Query: 129 ALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALG 188
AL+FVALGL ++IP ++Y F +AG KLIKR+R + F++++H +ISWFD+ +SSG +G
Sbjct: 726 ALIFVALGLTDLIVIPLQNYLFAIAGAKLIKRIRSLSFDRVLHQDISWFDDTKNSSGVIG 785
Query: 189 ARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
ARLSTDA++V+ +VGD LGL++Q++AT I +IAF A W
Sbjct: 786 ARLSTDASTVKSIVGDVLGLIMQNMATIIGAFIIAFTANW 825
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 93/163 (57%), Gaps = 11/163 (6%)
Query: 69 KVPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIF-YEPADELRKDSK 126
++ Y+L + ++ +I ++++GT++A+ NG P +L+ ++I++F + D + K+
Sbjct: 17 RIAFYKLFTFADRYDIVLMVIGTLSAMANGLTQPFMSILMGQLINVFGFSDHDHVFKEVS 76
Query: 127 VWALVFVAL----GLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADH 182
A+ F+ L G+VSFL + C + V G + R+R++ + I+ +I +FD +
Sbjct: 77 KVAVKFLYLAAYAGVVSFLQVSC----WMVTGERQSTRIRRLYLKTILRQDIGFFD-TET 131
Query: 183 SSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFV 225
++G + R+S D ++ +G+ +G Q +++ + G +AF+
Sbjct: 132 NTGEVIGRMSGDTILIQDSMGEKVGKFTQLVSSFVGGFTVAFI 174
>AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 |
chr4:780734-785329 REVERSE LENGTH=1229
Length = 1229
Score = 199 bits (505), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 133/198 (67%)
Query: 63 STVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELR 122
S S V + R+A LNKPE +L+LGT+ VNG + PIFG+L +K+I F++P +++
Sbjct: 639 SREQSRNVSITRIAALNKPETTILILGTLLGAVNGTIFPIFGILFAKVIEAFFKPPHDMK 698
Query: 123 KDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADH 182
+DS+ W+++FV LG+ S ++ P +Y F VAGG+LI+R+R MCFEK+VHME+ WFD+ ++
Sbjct: 699 RDSRFWSMIFVLLGVASLIVYPMHTYLFAVAGGRLIQRIRVMCFEKVVHMEVGWFDDPEN 758
Query: 183 SSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQXXXXXXXXXXXXX 242
SSG +G+RLS DAA ++ LVGD+L L V++ A A++GL+IAF A W+
Sbjct: 759 SSGTIGSRLSADAALIKTLVGDSLSLSVKNAAAAVSGLIIAFTASWKLAVIILVMIPLIG 818
Query: 243 XXXXXXXXXXQGFSADAK 260
+GF+ADAK
Sbjct: 819 INGYLQIKFIKGFTADAK 836
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 67 SPKVPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADELRKD- 124
+ VP Y+L ++ + ++ ++++G+I A+ NG P+ LL +I + ++ KD
Sbjct: 5 TKTVPFYKLFSFSDSTDVLLMIVGSIGAIGNGVGFPLMTLLFGDLIDSIGQ--NQSNKDI 62
Query: 125 ----SKVWALVFVALGL----VSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISW 176
SKV L FV LGL +FL + C + + G + R+R + + I+ +I +
Sbjct: 63 VEIVSKV-CLKFVYLGLGTLGAAFLQVAC----WMITGERQAARIRSLYLKTILRQDIGF 117
Query: 177 FDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
FD + S+G + R+S D + +G+ +G +Q IAT + G V+AFV W
Sbjct: 118 FD-VETSTGEVVGRMSGDTVLILEAMGEKVGKFIQLIATFVGGFVLAFVKGW 168
>AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1,
ATPGP19, ABCB19, ATABCB19 | ATP binding cassette
subfamily B19 | chr3:10870287-10877286 REVERSE
LENGTH=1252
Length = 1252
Score = 124 bits (310), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Query: 67 SPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFY-EPADELRKDS 125
+P+ YRL LN PE P ++G + ++++G + P F +++S MI +FY D + + +
Sbjct: 668 APENYFYRLLKLNSPEWPYSIMGAVGSILSGFIGPTFAIVMSNMIEVFYYTDYDSMERKT 727
Query: 126 KVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSG 185
K + +++ GL + + YFF + G L RVR+M I+ E+ WFDE +H+S
Sbjct: 728 KEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLSAILRNEVGWFDEDEHNSS 787
Query: 186 ALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
+ ARL+TDAA V+ + + + +++Q++ + +T ++AF+ W+
Sbjct: 788 LIAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWR 831
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 103/190 (54%), Gaps = 16/190 (8%)
Query: 51 SEPTSGGPKAPPSTVSSPK---VPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLL 106
SE + K P+ K +P ++L ++ +K + ++ +G++ A+V+G+ +P+F LL
Sbjct: 2 SETNTTDAKTVPAEAEKKKEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFLL 61
Query: 107 LSKMISIFYEPADELRK---DSKVWALVFVALGLV----SFLIIPCRSYFFGVAGGKLIK 159
+M++ F + +L + + ++L FV LGLV S+ I C Y +G + +
Sbjct: 62 FGQMVNGFGKNQMDLHQMVHEVSRYSLYFVYLGLVVCFSSYAEIACWMY----SGERQVA 117
Query: 160 RVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITG 219
+RK E ++ ++ +FD D +G + +STD V+ + + +G + +++T + G
Sbjct: 118 ALRKKYLEAVLKQDVGFFD-TDARTGDIVFSVSTDTLLVQDAISEKVGNFIHYLSTFLAG 176
Query: 220 LVIAFVACWQ 229
LV+ FV+ W+
Sbjct: 177 LVVGFVSAWK 186
>AT3G28345.1 | Symbols: | ABC transporter family protein |
chr3:10593921-10598775 REVERSE LENGTH=1240
Length = 1240
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 111/197 (56%), Gaps = 9/197 (4%)
Query: 42 VGNSGR-HSFSEPTSGGPKAPPSTVSS------PKVPLY-RLAYLNKPEIPVLLLGTITA 93
+ NS R + S +S PST+ + P++P + RL +N PE L G I+A
Sbjct: 620 IRNSSRVSTLSRSSSANSVTGPSTIKNLSEDNKPQLPSFKRLLAMNLPEWKQALYGCISA 679
Query: 94 VVNGALLPIFGLLLSKMISIFYEPA-DELRKDSKVWALVFVALGLVSFLIIPCRSYFFGV 152
+ GA+ P + L M+S+++ + DE+++ ++++AL FV L ++SFLI + Y F
Sbjct: 680 TLFGAIQPAYAYSLGSMVSVYFLTSHDEIKEKTRIYALSFVGLAVLSFLINISQHYNFAY 739
Query: 153 AGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQH 212
G L KR+R+ K++ E+ WFD ++SSGA+ +RL+ DA VR LVGD + L+VQ
Sbjct: 740 MGEYLTKRIRERMLSKVLTFEVGWFDRDENSSGAICSRLAKDANVVRSLVGDRMALVVQT 799
Query: 213 IATAITGLVIAFVACWQ 229
++ + V W+
Sbjct: 800 VSAVTIAFTMGLVIAWR 816
>AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 |
chr3:10611071-10616301 REVERSE LENGTH=1228
Length = 1228
Score = 119 bits (298), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 98/164 (59%), Gaps = 2/164 (1%)
Query: 68 PKVPLY-RLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFY-EPADELRKDS 125
P VP + RL +N+PE L G ++A + GA+ PI+ MIS+F+ +++++++
Sbjct: 639 PLVPSFKRLMAMNRPEWKHALCGCLSASLGGAVQPIYAYSSGLMISVFFLTNHEQIKENT 698
Query: 126 KVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSG 185
+++ L+F L L +F + Y F G L KR+R+ KI+ E++WFDE ++SSG
Sbjct: 699 RIYVLLFFGLALFTFFTSISQQYSFSYMGEYLTKRIREQMLSKILTFEVNWFDEEENSSG 758
Query: 186 ALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
A+ +RL+ DA VR LVG+ + LLVQ I+T + I V W+
Sbjct: 759 AICSRLAKDANVVRSLVGERMSLLVQTISTVMVACTIGLVIAWR 802
>AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 |
chr3:10623742-10628201 REVERSE LENGTH=1240
Length = 1240
Score = 119 bits (297), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 99/166 (59%), Gaps = 2/166 (1%)
Query: 66 SSPKVPLY-RLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPA-DELRK 123
+ P VP + RL +N+PE L G ++A + G L P+ +IS+F+ + D++++
Sbjct: 651 NQPLVPSFTRLMVMNRPEWKHALYGCLSAALVGVLQPVSAYSAGSVISVFFLTSHDQIKE 710
Query: 124 DSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHS 183
++++ L+FV L + SFL+ + Y F G L KR+R+ KI+ E++WFD D+S
Sbjct: 711 KTRIYVLLFVGLAIFSFLVNISQHYGFAYMGEYLTKRIREQMLSKILTFEVNWFDIDDNS 770
Query: 184 SGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
SGA+ +RL+ DA VR +VGD + LLVQ I+ I +I V W+
Sbjct: 771 SGAICSRLAKDANVVRSMVGDRMSLLVQTISAVIIACIIGLVIAWR 816
>AT3G28415.1 | Symbols: | ABC transporter family protein |
chr3:10647123-10651540 REVERSE LENGTH=1221
Length = 1221
Score = 117 bits (293), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 95/157 (60%), Gaps = 1/157 (0%)
Query: 74 RLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPA-DELRKDSKVWALVF 132
RL +NKPE L G ++AV+ GAL PI+ M+S+++ + DE+++ ++++ L+F
Sbjct: 641 RLMAMNKPEWKHALYGCLSAVLYGALHPIYAYASGSMVSVYFLTSHDEMKEKTRIYVLLF 700
Query: 133 VALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLS 192
V L ++ FLI + Y F G L KR+R+ K++ E+SWFDE ++SSG++ +RL+
Sbjct: 701 VGLAVLCFLISIIQQYSFAYMGEYLTKRIRENILSKLLTFEVSWFDEDENSSGSICSRLA 760
Query: 193 TDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
DA VR LVG+ + LLVQ I+ + W+
Sbjct: 761 KDANVVRSLVGERVSLLVQTISAVSVACTLGLAISWK 797
>AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 |
chr3:10629425-10633967 REVERSE LENGTH=1225
Length = 1225
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 99/173 (57%), Gaps = 5/173 (2%)
Query: 58 PKAPPSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEP 117
PK S V S K RL +N+PE L G + A + GA+ PI+ M+S+++
Sbjct: 633 PKDGKSLVPSFK----RLMSMNRPEWKHALYGCLGAALFGAVQPIYSYSSGSMVSVYFLA 688
Query: 118 A-DELRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISW 176
+ D++++ ++++ L+FV L L +FL + Y F G L KR+R+ KI+ E++W
Sbjct: 689 SHDQIKEKTRIYVLLFVGLALFTFLSNISQHYGFAYMGEYLTKRIRERMLGKILTFEVNW 748
Query: 177 FDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
FD+ ++SSGA+ +RL+ DA VR LVGD + LLVQ I+ I V W+
Sbjct: 749 FDKDENSSGAICSRLAKDANMVRSLVGDRMSLLVQTISAVSITCAIGLVISWR 801
>AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 |
chr1:9733597-9738129 REVERSE LENGTH=1245
Length = 1245
Score = 107 bits (268), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 95/159 (59%), Gaps = 1/159 (0%)
Query: 72 LYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEP-ADELRKDSKVWAL 130
++ L LN PE P LLG+I AV+ GA P+F + ++ +++ FY P + +++D + A+
Sbjct: 667 IWELIKLNSPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPFPNVIKRDVEKVAI 726
Query: 131 VFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGAR 190
+F G+V+ I + YF+ + G +L RVR F I+ EI WFD ++++G+L +
Sbjct: 727 IFAGAGIVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLTSI 786
Query: 191 LSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
L+ DA VR + D L +VQ+++ +T L +AF W+
Sbjct: 787 LAADATLVRSALADRLSTIVQNLSLTVTALALAFFYSWR 825
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 79 NKPEIPVLLLGTITAVVNGALLPIFGLLLSKMI-SIFYEPADELRKDSKVW--ALVFVAL 135
+K + ++LLG + A ++GA LP+F + KM+ S+ D S+V AL V L
Sbjct: 40 DKLDYFLMLLGGLGACIHGATLPLFFVFFGKMLDSLGNLSTDPKAISSRVSQNALYLVYL 99
Query: 136 GLVSFLIIPCRSYFFGVA-----GGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGAR 190
GLV+F+ S + GV+ G + R+R + I+ +I++FD S L
Sbjct: 100 GLVNFV-----SAWIGVSCWMQTGERQTARLRINYLKSILAKDITFFDTEARDSN-LIFH 153
Query: 191 LSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
+S+DA V+ +GD ++++++ I G VI F++ WQ
Sbjct: 154 ISSDAILVQDAIGDKTDHVLRYLSQFIAGFVIGFLSVWQ 192
>AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 |
chr4:13177438-13183425 FORWARD LENGTH=1273
Length = 1273
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/185 (30%), Positives = 98/185 (52%), Gaps = 6/185 (3%)
Query: 45 SGRHSFSEPTSGGPKAPPSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFG 104
S R S + P P KV + RL + +P+ + GTI A + G+ +P+F
Sbjct: 675 SERESVTRPDGADPS------KKVKVTVGRLYSMIRPDWMYGVCGTICAFIAGSQMPLFA 728
Query: 105 LLLSKMISIFYEPADELRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKM 164
L +S+ + +Y DE +K+ K A++F +++ ++ FG G +L RVR+
Sbjct: 729 LGVSQALVSYYSGWDETQKEIKKIAILFCCASVITLIVYTIEHICFGTMGERLTLRVREN 788
Query: 165 CFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAF 224
F I+ EI WFDE D++S L +RL +DA ++ +V D +L+Q++ +T +IAF
Sbjct: 789 MFRAILKNEIGWFDEVDNTSSMLASRLESDATLLKTIVVDRSTILLQNLGLVVTSFIIAF 848
Query: 225 VACWQ 229
+ W+
Sbjct: 849 ILNWR 853
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 26/202 (12%)
Query: 49 SFSEPTS-----------GGPKAPPST--VSSPKVPLYRL-AYLNKPEIPVLLLGTITAV 94
SFS PT+ G AP ++ PKV L +L ++ + + ++ LG++ A
Sbjct: 26 SFSSPTNYTHLKLKKMQPSGDPAPEKEKEMTQPKVSLLKLFSFADFYDCVLMTLGSVGAC 85
Query: 95 VNGALLPIFGLLLSKMISIF-------YEPADELRKDSKVWALVFVALGLVSFLIIPCRS 147
++GA +PIF + K+I+I + + + K S + + VA+ S+L + C
Sbjct: 86 IHGASVPIFFIFFGKLINIIGLAYLFPKQASHRVAKYSLDFVYLSVAILFSSWLEVACWM 145
Query: 148 YFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALG 207
+ G + ++R+ ++ +IS FD + S+G + + +++D V+ + + +G
Sbjct: 146 H----TGERQAAKMRRAYLRSMLSQDISLFD-TEASTGEVISAITSDILVVQDALSEKVG 200
Query: 208 LLVQHIATAITGLVIAFVACWQ 229
+ +I+ I G I F + WQ
Sbjct: 201 NFLHYISRFIAGFAIGFTSVWQ 222
>AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein 14
| chr1:9763436-9767917 FORWARD LENGTH=1247
Length = 1247
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 93/160 (58%), Gaps = 3/160 (1%)
Query: 72 LYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADEL--RKDSKVWA 129
++ L LN PE LLG+I AV+ G+ +F + L+ +++ FY P L R+ KV A
Sbjct: 669 IWELIKLNAPEWLYALLGSIGAVLAGSQPALFSMGLAYVLTTFYSPFPSLIKREVDKV-A 727
Query: 130 LVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGA 189
++FV G+V+ I + YF+ + G +L RVR F I+ EI WFD ++++G+L +
Sbjct: 728 IIFVGAGIVTAPIYILQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNTGSLTS 787
Query: 190 RLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
L+ DA VR + D L +VQ+++ IT L +AF W+
Sbjct: 788 ILAADATLVRSAIADRLSTIVQNLSLTITALALAFFYSWR 827
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 85 VLLLGTITAVVNGALLPIFGLLLSKMI-SIFYEPADELRKDSKVW--ALVFVALGLVSFL 141
++ LG + ++G LP+F + M+ S+ D S+V AL V LGLV+ +
Sbjct: 47 LMFLGGLGTCIHGGTLPLFFVFFGGMLDSLGKLSTDPNAISSRVSQNALYLVYLGLVNLV 106
Query: 142 IIPCRSYFFGVA-----GGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAA 196
S + GVA G + R+R + I+ +I++FD S + +S+DA
Sbjct: 107 -----SAWIGVACWMQTGERQTARLRINYLKSILAKDITFFDTEARDSNFI-FHISSDAI 160
Query: 197 SVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
V+ +GD G +++++ I G VI F++ WQ
Sbjct: 161 LVQDAIGDKTGHVLRYLCQFIAGFVIGFLSVWQ 193
>AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 |
chr2:16478249-16484827 REVERSE LENGTH=1407
Length = 1407
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 56 GGPKAPPSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFY 115
G K PPS +RLA L+ PE +LG+I A + G+ P+ +++ +++ +Y
Sbjct: 813 GQHKEPPS--------FWRLAQLSFPEWLYAVLGSIGAAIFGSFNPLLAYVIALVVTTYY 864
Query: 116 -EPADELRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEI 174
LR++ W L+ +G+V+ + + ++FG+ G K+ +RVR+M F ++ E+
Sbjct: 865 TSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNEV 924
Query: 175 SWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
W+DE ++S L RL+ DA VR + L + +Q I ++I + W+
Sbjct: 925 GWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVIVAILIGLLLGWR 979
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/156 (19%), Positives = 81/156 (51%), Gaps = 16/156 (10%)
Query: 85 VLLLGTITAVVNGALLPIFGLLLSKMISIFYEP--ADELRKDSKVWALVFVALGLV---- 138
+++ G++ A +G L ++ +K++ + P +D L D + L+ ++L +V
Sbjct: 85 LMVFGSVAAAAHGTALIVYLHYFAKIVQVLAFPTDSDHLISDDQFNRLLELSLTIVYIAG 144
Query: 139 -----SFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLST 193
++ + C + + G + +R + +++ ++S+FD ++ G + +++ +
Sbjct: 145 GVFISGWIEVSC----WILTGERQTAVIRSKYVQVLLNQDMSFFDTYGNN-GDIVSQVLS 199
Query: 194 DAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
D ++ + + +G + ++AT I+GL+I FV CW+
Sbjct: 200 DVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWE 235
>AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette
subfamily B1 | chr2:15502162-15507050 FORWARD
LENGTH=1286
Length = 1286
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 1/159 (0%)
Query: 72 LYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADE-LRKDSKVWAL 130
+RLA +N PE LLG++ +V+ G+L F +LS ++S++Y P E + K +
Sbjct: 686 FWRLAKMNSPEWKYALLGSVGSVICGSLSAFFAYVLSAVLSVYYNPDHEYMIKQIDKYCY 745
Query: 131 VFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGAR 190
+ + L + + + F+ + G L KRVR+ ++ E++WFD+ ++ S + AR
Sbjct: 746 LLIGLSSAALVFNTLQHSFWDIVGENLTKRVREKMLSAVLKNEMAWFDQEENESARIAAR 805
Query: 191 LSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
L+ DA +VR +GD + ++VQ+ A + FV W+
Sbjct: 806 LALDANNVRSAIGDRISVIVQNTALMLVACTAGFVLQWR 844
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 93/191 (48%), Gaps = 24/191 (12%)
Query: 56 GGPKAPPS-TVSSPKV---------PLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGL 105
G P PP+ V PK L+R A + + ++ +G++ A V+G LP+F
Sbjct: 6 GAPPPPPTLVVEEPKKAEIRGVAFKELFRFA--DGLDYVLMGIGSVGAFVHGCSLPLFLR 63
Query: 106 LLSKMISIFYEPADELRK---DSKVWALVFVALGLV----SFLIIPCRSYFFGVAGGKLI 158
+ +++ F ++ + K + +AL F+ +G S+ I C + +G +
Sbjct: 64 FFADLVNSFGSNSNNVEKMMEEVLKYALYFLVVGAAIWASSWAEISCWMW----SGERQT 119
Query: 159 KRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAIT 218
++R E ++ +I +FD +S + A ++TDA V+ + + LG + ++AT ++
Sbjct: 120 TKMRIKYLEAALNQDIQFFDTEVRTSDVVFA-INTDAVMVQDAISEKLGNFIHYMATFVS 178
Query: 219 GLVIAFVACWQ 229
G ++ F A WQ
Sbjct: 179 GFIVGFTAVWQ 189
>AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 |
chr3:20507391-20513393 REVERSE LENGTH=1408
Length = 1408
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 45 SGRHSFSEP------TSGGPKAPPSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGA 98
S +FS P T KA +RLA L+ PE +LG++ A + G+
Sbjct: 789 SHSQTFSRPLSSPDDTKANGKASKDAQHKESPSFWRLAQLSFPEWLYAVLGSLGAAIFGS 848
Query: 99 LLPIFGLLLSKMISIFYE-PADELRKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKL 157
P+ +++ +++ +Y+ LR++ W L+ +G+V+ + + ++FG+ G K+
Sbjct: 849 FNPLLAYVIALVVTEYYKSKGGHLREEVDKWCLIIACMGIVTVVANFLQHFYFGIMGEKM 908
Query: 158 IKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAI 217
+RVR+M F ++ E+ WFD+ ++S L RL+ DA VR + L + +Q I
Sbjct: 909 TERVRRMMFSAMLRNEVGWFDDEENSPDTLSMRLANDATFVRAAFSNRLSIFIQDSFAVI 968
Query: 218 TGLVIAFVACWQ 229
L+I + W+
Sbjct: 969 VALLIGLLLGWR 980
>AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 |
chr1:3538470-3543782 REVERSE LENGTH=1227
Length = 1227
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 93/168 (55%)
Query: 62 PSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISIFYEPADEL 121
P T KV + RL + +P+ L GT+ + + G+ +P+F L +++ + +Y +
Sbjct: 638 PDTTKQAKVTVGRLYSMIRPDWKYGLCGTLGSFIAGSQMPLFALGIAQALVSYYMDWETT 697
Query: 122 RKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEAD 181
+ + K +++F +++ ++ FG+ G +L RVR+ F I+ EI WFD+ D
Sbjct: 698 QNEVKRISILFCCGSVITVIVHTIEHTTFGIMGERLTLRVRQKMFSAILRNEIGWFDKVD 757
Query: 182 HSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
++S L +RL +DA +R +V D +L++++ +T +I+F+ W+
Sbjct: 758 NTSSMLASRLESDATLLRTIVVDRSTILLENLGLVVTAFIISFILNWR 805
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 88/171 (51%), Gaps = 15/171 (8%)
Query: 68 PKVPLYRL-AYLNKPEIPVLLLGTITAVVNGALLPIFGLLLSKMISI----FYEPADELR 122
P V +L ++ + + ++ LG+I A ++GA +P+F + K+I+I + P +
Sbjct: 22 PSVSFLKLFSFADFYDCVLMALGSIGACIHGASVPVFFIFFGKLINIIGLAYLFPQEASH 81
Query: 123 KDSKVWALVFVALGLV----SFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFD 178
K +K ++L FV L +V S+L + C + G + ++RK ++ +IS FD
Sbjct: 82 KVAK-YSLDFVYLSVVILFSSWLEVACWMH----TGERQAAKIRKAYLRSMLSQDISLFD 136
Query: 179 EADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACWQ 229
+ S+G + + ++++ V+ + + +G + I+ I G I F + WQ
Sbjct: 137 -TEISTGEVISAITSEILVVQDAISEKVGNFMHFISRFIAGFAIGFASVWQ 186
>AT5G39040.1 | Symbols: ALS1, ATTAP2, TAP2 | transporter associated
with antigen processing protein 2 |
chr5:15625660-15629621 FORWARD LENGTH=644
Length = 644
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 41 GVGNSGRHSFSEPTSGGPKAPPS----------TVSSPKVPLYRLAYLNKPEIPVLLLGT 90
G G+S R + PKA S V + V R+ L KP+ L++GT
Sbjct: 16 GSGSSYRDPLLQNQEDKPKANGSENGLNDLEHGVVEAANVGFGRVFALAKPDAGKLVIGT 75
Query: 91 ITAVVNGA---LLPIFGLLLSKMISIFYEPADELRKDSKVWALVFVALGLVSF------- 140
I ++ L+P FG ++ ++S D + + +L+ V +V
Sbjct: 76 IALLIGSTTNLLVPKFGGMIIDIVS-----RDVKTPEQQTESLIAVRNAVVIILLIVVIG 130
Query: 141 -LIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHSSGALGARLSTDAASVR 199
+ R++ F A +++ R+RK F ++H EI+++D +G L +RLS D ++
Sbjct: 131 SICTALRAWLFNSASERVVARLRKDLFRHLMHQEIAFYDVT--KTGELLSRLSEDTQIIK 188
Query: 200 GLVGDALGLLVQHIATAITGLVIAFVACWQ 229
L ++++ TA+ G+ F + W+
Sbjct: 189 NAATTNLSEALRNVTTALIGVGFMFTSSWK 218
>AT1G70610.1 | Symbols: ATTAP1, TAP1 | transporter associated with
antigen processing protein 1 | chr1:26622086-26626331
FORWARD LENGTH=700
Length = 700
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 83/183 (45%), Gaps = 14/183 (7%)
Query: 49 SFSEPTSGGPKAPPSTVSSPKVPLYRLAYLNKPEIPVLLLGTITAVVNGALLPIFGLLLS 108
SFS+ G A P TV ++ L ++ I I A ++ +P F
Sbjct: 105 SFSDEVDGRFIAKPVTVWRALSRMWELVAEDRWVIFAAFSTLIVAALSEITIPHF----- 159
Query: 109 KMISIFYEPADEL---RKDSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMC 165
SIF + ++ ++ K+ + V G+ S + R FFG+A L+KR+R+
Sbjct: 160 LTASIFSAQSGDIAVFHRNVKLLVTLCVTSGICSGI----RGCFFGIANMILVKRMRETL 215
Query: 166 FEKIVHMEISWFDEADHSSGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFV 225
+ ++ +IS+FD + G L +RL +D V ++G+ L ++ +++ L+ +
Sbjct: 216 YSTLLFQDISFFDS--QTVGDLTSRLGSDCQQVSRVIGNDLNMIFRNVLQGTGALIYLLI 273
Query: 226 ACW 228
W
Sbjct: 274 LSW 276
>AT2G47800.1 | Symbols: ATMRP4, EST3, MRP4, ABCC4 | multidrug
resistance-associated protein 4 | chr2:19574944-19580383
FORWARD LENGTH=1516
Length = 1516
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 2/105 (1%)
Query: 124 DSKVWALVFVALGLVSFLIIPCRSYFFGVAGGKLIKRVRKMCFEKIVHMEISWFDEADHS 183
D+ V+ L +V + LVS +++ RSY+ G K + + I+H +S+FD
Sbjct: 991 DASVFILGYVIIALVSIVLVSIRSYYVTHLGLKTAQIFFRQILNSILHAPMSFFDTT--P 1048
Query: 184 SGALGARLSTDAASVRGLVGDALGLLVQHIATAITGLVIAFVACW 228
SG + +R STD +V L+ LGL+V T ++ ++ W
Sbjct: 1049 SGRILSRASTDQTNVDILIPFMLGLVVSMYTTLLSIFIVTCQYAW 1093