Miyakogusa Predicted Gene
- Lj4g3v2227870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2227870.1 Non Chatacterized Hit- tr|K4DHQ7|K4DHQ7_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.41,0.000000006,ABC transporter transmembrane region,ABC
transporter, transmembrane domain, type 1; no
description,N,CUFF.50729.1
(118 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 | chr3:23008755... 145 5e-36
AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 | chr1:524134-5... 137 2e-33
AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding c... 135 7e-33
AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 | chr1:529836-5... 131 8e-32
AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790... 129 5e-31
AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 | chr4:7807... 128 9e-31
AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 | chr5:18877192-... 93 4e-20
AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 | chr4:10022205-... 91 1e-19
AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 | chr4:13177438-1... 70 2e-13
AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 | chr1:3538470-... 67 3e-12
AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassett... 61 2e-10
AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 | chr3:10623742... 60 2e-10
AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 | chr3:10611071... 59 9e-10
AT3G28415.1 | Symbols: | ABC transporter family protein | chr3:... 58 2e-09
AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 | chr3:10629425... 57 3e-09
AT3G28345.1 | Symbols: | ABC transporter family protein | chr3:... 57 4e-09
AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 | chr1:9733597-... 55 8e-09
AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 | chr3:2050739... 54 3e-08
AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein ... 53 4e-08
AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 | chr2:16478249-1... 52 7e-08
AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1, ATPG... 52 9e-08
>AT3G62150.1 | Symbols: PGP21 | P-glycoprotein 21 |
chr3:23008755-23013579 REVERSE LENGTH=1296
Length = 1296
Score = 145 bits (366), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 87/100 (87%), Gaps = 2/100 (2%)
Query: 18 ISLYIMILFSK--QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIR 75
I + M+ FS +++YE+ASQVANDAVGSIRTVASFCAEEKVMK+Y+++CEGP++TGIR
Sbjct: 891 IYMKFMVGFSADAKRMYEEASQVANDAVGSIRTVASFCAEEKVMKMYKKKCEGPMRTGIR 950
Query: 76 RGIVSGVSFGISFFVLYAVYACSFYAGARLVEDGQKARDN 115
+GIVSG+ FG+SFFVL++ YA SFYAGARLV+DG+ D+
Sbjct: 951 QGIVSGIGFGVSFFVLFSSYAASFYAGARLVDDGKTTFDS 990
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 17 SISLYIM------ILFSK-----QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQER 65
SI L +M I+ SK Q Y A+ V VGSIRTVASF E++ + Y +
Sbjct: 232 SIPLLVMSGAALAIVISKMASRGQTSYAKAAVVVEQTVGSIRTVASFTGEKQAISNYNKH 291
Query: 66 CEGPIKTGIRRGIVSGVSFGISFFVLYAVYACS-FYAGARLVEDG 109
+ G+ G +G+ G V++ YA + +Y G ++E G
Sbjct: 292 LVSAYRAGVFEGASTGLGLGTLNIVIFCTYALAVWYGGKMILEKG 336
>AT1G02520.1 | Symbols: PGP11 | P-glycoprotein 11 |
chr1:524134-528745 FORWARD LENGTH=1278
Length = 1278
Score = 137 bits (344), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 61/84 (72%), Positives = 75/84 (89%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
YE+ASQVANDAVGSIRTVASFCAEEKVM++Y+++CEGPIK GI++G +SG+ FG SFF+L
Sbjct: 887 YEEASQVANDAVGSIRTVASFCAEEKVMQMYKKQCEGPIKDGIKQGFISGLGFGFSFFIL 946
Query: 92 YAVYACSFYAGARLVEDGQKARDN 115
+ VYA SFYAGARLVEDG+ +N
Sbjct: 947 FCVYATSFYAGARLVEDGKTTFNN 970
Score = 58.5 bits (140), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
Q Y A+ V +GSIRTVASF E++ + Y++ K+ I++G +G+ G+ F
Sbjct: 233 QAAYAKAATVVEQTIGSIRTVASFTGEKQAINSYKKFITSAYKSSIQQGFSTGLGLGVMF 292
Query: 89 FVLYAVYACSFYAGARLV 106
FV ++ YA + + G +++
Sbjct: 293 FVFFSSYALAIWFGGKMI 310
>AT2G47000.1 | Symbols: MDR4, PGP4, ABCB4, ATPGP4 | ATP binding
cassette subfamily B4 | chr2:19310008-19314750 REVERSE
LENGTH=1286
Length = 1286
Score = 135 bits (339), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 60/87 (68%), Positives = 75/87 (86%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
+K+Y +ASQVANDAVGSIRTVASFCAE+KVM +Y ++CEGP+K GIR+GIVSG+ FG SF
Sbjct: 894 KKMYGEASQVANDAVGSIRTVASFCAEDKVMNMYSKKCEGPMKNGIRQGIVSGIGFGFSF 953
Query: 89 FVLYAVYACSFYAGARLVEDGQKARDN 115
FVL++ YA SFY GARLV+DG+ D+
Sbjct: 954 FVLFSSYAASFYVGARLVDDGKTTFDS 980
>AT1G02530.1 | Symbols: PGP12 | P-glycoprotein 12 |
chr1:529836-534542 FORWARD LENGTH=1273
Length = 1273
Score = 131 bits (330), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 58/79 (73%), Positives = 71/79 (89%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
YE+ASQVANDAVGSIRTVASFCAEEKVM++Y ++CEGPIK G+++G +SG+ FG SFF+L
Sbjct: 882 YEEASQVANDAVGSIRTVASFCAEEKVMQMYNKQCEGPIKDGVKQGFISGLGFGFSFFIL 941
Query: 92 YAVYACSFYAGARLVEDGQ 110
+ VYA SFYA ARLVEDG+
Sbjct: 942 FCVYATSFYAAARLVEDGK 960
Score = 54.7 bits (130), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 45/78 (57%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
Q Y A+ V +GSIRTVASF E++ + Y++ K+ I++G +G+ G+
Sbjct: 220 QAAYAKAATVVEQTIGSIRTVASFTGEKQAINSYKKYITSAYKSSIQQGFSTGLGLGVMI 279
Query: 89 FVLYAVYACSFYAGARLV 106
+V ++ YA + + G +++
Sbjct: 280 YVFFSSYALAIWFGGKMI 297
>AT4G01830.1 | Symbols: PGP5 | P-glycoprotein 5 | chr4:785683-790447
REVERSE LENGTH=1230
Length = 1230
Score = 129 bits (323), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 65/99 (65%), Positives = 80/99 (80%), Gaps = 6/99 (6%)
Query: 18 ISLYIMILFSK------QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIK 71
I+ YI I F K + YE+ASQVANDAVGSIRTVASFCAEEKVM++Y++RCE IK
Sbjct: 820 INGYIQIKFMKGFSADAKAKYEEASQVANDAVGSIRTVASFCAEEKVMEMYKKRCEDTIK 879
Query: 72 TGIRRGIVSGVSFGISFFVLYAVYACSFYAGARLVEDGQ 110
+GI++G++SGV FGISFFVLY+VYA FY GARLV+ G+
Sbjct: 880 SGIKQGLISGVGFGISFFVLYSVYASCFYVGARLVKAGR 918
Score = 61.2 bits (147), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%)
Query: 28 KQKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGIS 87
+Q Y AS V +GSIRTVASF E++ M Y+E K+ +++G V+G+ G+
Sbjct: 204 EQAAYAKASNVVEQTLGSIRTVASFTGEKQAMSSYKELINLAYKSNVKQGFVTGLGLGVM 263
Query: 88 FFVLYAVYACSFYAGARLV 106
F V ++ YA + G ++
Sbjct: 264 FLVFFSTYALGTWFGGEMI 282
>AT4G01820.1 | Symbols: PGP3, MDR3 | P-glycoprotein 3 |
chr4:780734-785329 REVERSE LENGTH=1229
Length = 1229
Score = 128 bits (321), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 59/79 (74%), Positives = 72/79 (91%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
YE+ASQVANDAVGSIRTVASFCAEEKVM++Y++RCE IK+GI++G++SGV FGISFFVL
Sbjct: 839 YEEASQVANDAVGSIRTVASFCAEEKVMEMYKKRCEDTIKSGIKQGLISGVGFGISFFVL 898
Query: 92 YAVYACSFYAGARLVEDGQ 110
Y+VYA FY GARLV+ G+
Sbjct: 899 YSVYASCFYVGARLVKAGR 917
Score = 58.2 bits (139), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 28 KQKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGIS 87
+Q Y AS V +GSIRTVASF E++ MK Y+E + +++G G+ G+
Sbjct: 199 EQAAYAKASTVVEQTLGSIRTVASFTGEKQAMKSYREFINLAYRASVKQGFSMGLGLGVV 258
Query: 88 FFVLYAVYACSFYAGARLV 106
FFV + YA + + G ++
Sbjct: 259 FFVFFCSYALAIWFGGEMI 277
>AT5G46540.1 | Symbols: PGP7 | P-glycoprotein 7 |
chr5:18877192-18882347 REVERSE LENGTH=1248
Length = 1248
Score = 92.8 bits (229), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 59/77 (76%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
YE+ASQVA+DAV SIRTVASFCAE+KVM LYQE+C+ P + G + G+VSG+ +G S+ L
Sbjct: 860 YEEASQVASDAVSSIRTVASFCAEDKVMDLYQEKCDEPKQQGFKLGLVSGLCYGGSYLAL 919
Query: 92 YAVYACSFYAGARLVED 108
Y + + F G+ L+++
Sbjct: 920 YVIESVCFLGGSWLIQN 936
Score = 59.7 bits (143), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
Q Y +A V AVGSIRTV +F E++ M Y+++ E K+ +++G+ SG+ GI
Sbjct: 209 QLAYTEAGNVVQQAVGSIRTVVAFTGEKQSMGKYEKKLEIAYKSMVKQGLYSGLGIGIMM 268
Query: 89 FVLYAVYACSFYAGAR-LVEDG 109
V+Y Y + + GAR ++E G
Sbjct: 269 VVVYCTYGFAIWYGARQIIEKG 290
>AT4G18050.1 | Symbols: PGP9 | P-glycoprotein 9 |
chr4:10022205-10027280 FORWARD LENGTH=1236
Length = 1236
Score = 91.3 bits (225), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 64/82 (78%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
+ +YE+ASQVANDAV SIRTVASFCAEEKVM LYQ++C+GP K G+R G++SG FG SF
Sbjct: 845 KAMYEEASQVANDAVSSIRTVASFCAEEKVMDLYQQKCDGPKKNGVRLGLLSGAGFGFSF 904
Query: 89 FVLYAVYACSFYAGARLVEDGQ 110
F LY + F +GA L++ G+
Sbjct: 905 FFLYCINCVCFVSGAGLIQIGK 926
Score = 53.9 bits (128), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
Q Y +A V VG+IRTV +F E++ + Y+ + E KT +++G++SG G
Sbjct: 207 QVAYAEAGNVVEQTVGAIRTVVAFTGEKQATEKYESKLEIAYKTVVQQGLISGFGLGTML 266
Query: 89 FVLYAVYACSFYAGARLV 106
V++ Y + + GA+L+
Sbjct: 267 AVIFCSYGLAVWYGAKLI 284
>AT4G25960.1 | Symbols: PGP2 | P-glycoprotein 2 |
chr4:13177438-13183425 FORWARD LENGTH=1273
Length = 1273
Score = 70.5 bits (171), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 54/81 (66%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
K Y A+ +A ++V +IRTVA+FCAEEK+++LY P K+ RRG ++G+ +G+S
Sbjct: 884 NKAYLKANMLAGESVSNIRTVAAFCAEEKILELYSRELLEPSKSSFRRGQIAGLFYGVSQ 943
Query: 89 FVLYAVYACSFYAGARLVEDG 109
F +++ Y + + G+ L++ G
Sbjct: 944 FFIFSSYGLALWYGSTLMDKG 964
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
+K Y A ++A + +G++RTV +F EE+ ++LY+E E K G + G+ G+ G
Sbjct: 253 RKSYIKAGEIAEEVIGNVRTVQAFTGEERAVRLYREALENTYKYGRKAGLTKGLGLGSMH 312
Query: 89 FVLYAVYACSFYAGARLVE----DGQKARDNKWN 118
VL+ +A + + +V DG K+ N
Sbjct: 313 CVLFLSWALLVWFTSVVVHKDIADGGKSFTTMLN 346
>AT1G10680.1 | Symbols: PGP10 | P-glycoprotein 10 |
chr1:3538470-3543782 REVERSE LENGTH=1227
Length = 1227
Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 52/80 (65%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
K Y A+ +A +++ +IRTV +FCAEEKV+ LY + P + RRG ++G+ +G+S F
Sbjct: 837 KAYLKANMLAGESISNIRTVVAFCAEEKVLDLYSKELLEPSERSFRRGQMAGILYGVSQF 896
Query: 90 VLYAVYACSFYAGARLVEDG 109
+++ Y + + G+ L+E G
Sbjct: 897 FIFSSYGLALWYGSILMEKG 916
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 29 QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISF 88
+K Y A+++A + +G++RTV +F EEK + YQ G + G+ G+ G
Sbjct: 217 RKSYVKANEIAEEVIGNVRTVQAFTGEEKAVSSYQGALRNTYNYGRKAGLAKGLGLGSLH 276
Query: 89 FVLYAVYACSFYAGARLVEDG 109
FVL+ +A + + +V G
Sbjct: 277 FVLFLSWALLIWFTSIVVHKG 297
>AT2G36910.1 | Symbols: ATPGP1, PGP1, ABCB1 | ATP binding cassette
subfamily B1 | chr2:15502162-15507050 FORWARD
LENGTH=1286
Length = 1286
Score = 60.8 bits (146), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 49/78 (62%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
+ +Q+A +A+ ++RTVA+F +E K+++LY E P+K +G ++G +G++ F L
Sbjct: 878 HAKGTQLAGEAIANVRTVAAFNSEAKIVRLYTANLEPPLKRCFWKGQIAGSGYGVAQFCL 937
Query: 92 YAVYACSFYAGARLVEDG 109
YA YA + + LV+ G
Sbjct: 938 YASYALGLWYASWLVKHG 955
>AT3G28380.1 | Symbols: PGP17 | P-glycoprotein 17 |
chr3:10623742-10628201 REVERSE LENGTH=1240
Length = 1240
Score = 60.5 bits (145), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
K +++S++A +AV +IRT+ +F ++E+++KL ++ EGP + + R ++G+ G S
Sbjct: 848 KAQDESSKLAAEAVSNIRTITAFSSQERIIKLLKKVQEGPRRESVHRSWLAGIVLGTSRS 907
Query: 90 VLYAVYACSFYAGARLVEDGQ 110
++ A +F+ G RL+ DG+
Sbjct: 908 LITCTSALNFWYGGRLIADGK 928
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y +A +A A+ S+RTV +F +E K++ + G +K G+R+G+ G++ G S V
Sbjct: 215 YNEAGSIAEQAISSVRTVYAFGSENKMIGKFSTALRGSVKLGLRQGLAKGITIG-SNGVT 273
Query: 92 YAVYACSFYAGARLV 106
+A++A + G+RLV
Sbjct: 274 HAIWAFLTWYGSRLV 288
>AT3G28360.1 | Symbols: PGP16 | P-glycoprotein 16 |
chr3:10611071-10616301 REVERSE LENGTH=1228
Length = 1228
Score = 58.5 bits (140), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 51/78 (65%)
Query: 33 EDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVLY 92
+++S++A +AV +IRT+ +F ++E++MKL + EGP + R+ ++G+ G + ++
Sbjct: 837 DESSKLAAEAVSNIRTITTFSSQERIMKLLERVQEGPRRESARQSWLAGIMLGTTQSLIT 896
Query: 93 AVYACSFYAGARLVEDGQ 110
A +F+ G +L+ DG+
Sbjct: 897 CTSALNFWYGGKLIADGK 914
Score = 55.8 bits (133), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y +A +A A+ S+RTV +F +E+K+++ + + +G +K G+R+G+ G++ G S ++
Sbjct: 202 YNEAGSIAEQAISSVRTVYAFVSEKKMIEKFSDALQGSVKLGLRQGLAKGIAIG-SNGIV 260
Query: 92 YAVYACSFYAGARLV 106
YA++ + G+R+V
Sbjct: 261 YAIWGFLTWYGSRMV 275
>AT3G28415.1 | Symbols: | ABC transporter family protein |
chr3:10647123-10651540 REVERSE LENGTH=1221
Length = 1221
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 53/81 (65%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
K +++S++A +AV +IRT+ +F ++E+++KL + EGP + IR+ ++G+ S
Sbjct: 829 KAQDESSKLAAEAVSNIRTITAFSSQERILKLLKMVQEGPQRENIRQSWLAGIVLATSRS 888
Query: 90 VLYAVYACSFYAGARLVEDGQ 110
++ A +++ GARL+ DG+
Sbjct: 889 LMTCTSALNYWYGARLIIDGK 909
Score = 52.8 bits (125), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y +A +A A+ +RTV +F +E K++ + EG +K G+R+GI G++ G S V
Sbjct: 194 YNEAGSIAEQAISLVRTVYAFGSERKMISKFSAALEGSVKLGLRQGIAKGIAIG-SNGVT 252
Query: 92 YAVYACSFYAGARLV 106
YA++ + G+R+V
Sbjct: 253 YAIWGFMTWYGSRMV 267
>AT3G28390.1 | Symbols: PGP18 | P-glycoprotein 18 |
chr3:10629425-10633967 REVERSE LENGTH=1225
Length = 1225
Score = 56.6 bits (135), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 51/78 (65%)
Query: 33 EDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVLY 92
+++S++A +AV +IRT+ +F ++E+++ L + EGP K R+ ++G+ G S ++
Sbjct: 836 DESSKLAAEAVSNIRTITAFSSQERIINLLKMVQEGPRKDSARQSWLAGIMLGTSQSLIT 895
Query: 93 AVYACSFYAGARLVEDGQ 110
V A +F+ G +L+ DG+
Sbjct: 896 CVSALNFWYGGKLIADGK 913
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y +A +A + S+RTV +F +E+K+++ + +G +K G+R+G+ G++ G S +
Sbjct: 203 YNEAGSIAEQVISSVRTVYAFGSEKKMIEKFSTALQGSVKLGLRQGLAKGIAIG-SNGIT 261
Query: 92 YAVYACSFYAGARLV 106
YA++ + G+R+V
Sbjct: 262 YAIWGFLTWYGSRMV 276
>AT3G28345.1 | Symbols: | ABC transporter family protein |
chr3:10593921-10598775 REVERSE LENGTH=1240
Length = 1240
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 50/80 (62%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
K +++S++A +AV ++RT+ +F ++E++MK+ ++ E P + IR+ +G +S
Sbjct: 848 KAQDESSKLAAEAVSNVRTITAFSSQERIMKMLEKAQESPRRESIRQSWFAGFGLAMSQS 907
Query: 90 VLYAVYACSFYAGARLVEDG 109
+ +A F+ G RL++DG
Sbjct: 908 LTSCTWALDFWYGGRLIQDG 927
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y +A VA A+ S+RTV +F E K + + +G +K GI++G+ G++ G S +
Sbjct: 215 YNEAGFVAEQAISSVRTVYAFSGERKTISKFSTALQGSVKLGIKQGLAKGITIG-SNGIT 273
Query: 92 YAVYACSFYAGARLV 106
+A++ + G+R+V
Sbjct: 274 FAMWGFMSWYGSRMV 288
>AT1G27940.1 | Symbols: PGP13 | P-glycoprotein 13 |
chr1:9733597-9738129 REVERSE LENGTH=1245
Length = 1245
Score = 55.5 bits (132), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y DA +VA + + +RTV +F EEK +K Y + +K G R G+ G+ G+++ +L
Sbjct: 226 YADAGKVAEEVMSQVRTVYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLL 285
Query: 92 YAVYACSFYAGARLVEDGQ 110
+ +A + + LV G+
Sbjct: 286 FCAWALLLWYASLLVRHGK 304
Score = 51.2 bits (121), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 44/77 (57%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
+ Y A+ VA +A+ +IRTVA++ AE+++ + + P K RG +SG +G+S F
Sbjct: 857 RAYSRATSVAREAIANIRTVAAYGAEKQISEQFTCELSKPTKNAFVRGHISGFGYGLSQF 916
Query: 90 VLYAVYACSFYAGARLV 106
+ + YA + + L+
Sbjct: 917 LAFCSYALGLWYVSVLI 933
>AT3G55320.1 | Symbols: PGP20 | P-glycoprotein 20 |
chr3:20507391-20513393 REVERSE LENGTH=1408
Length = 1408
Score = 53.5 bits (127), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 26 FSK--QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVS 83
FSK Q+++ AS V DAV +I TV +FCA KVM+LY+ + + ++ G+ G +
Sbjct: 1006 FSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRMQLQRILRQSYLHGMAIGFA 1065
Query: 84 FGISFFVLYAVYACSFYAGARLVEDG 109
FG S F+L+A A + A V G
Sbjct: 1066 FGFSQFLLFACNALLLWCTALSVNRG 1091
>AT1G28010.1 | Symbols: PGP14, ATABCB14, ABCB14 | P-glycoprotein 14
| chr1:9763436-9767917 FORWARD LENGTH=1247
Length = 1247
Score = 53.1 bits (126), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%)
Query: 32 YEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFFVL 91
Y DA +VA + + +RTV +F EEK +K Y + +K R G+ G+ G+++ +L
Sbjct: 227 YADAGKVAEEVMSQVRTVYAFVGEEKAVKSYSNSLKKALKLSKRSGLAKGLGVGLTYSLL 286
Query: 92 YAVYACSFYAGARLVEDGQ 110
+ +A F+ + LV G+
Sbjct: 287 FCAWALLFWYASLLVRHGK 305
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
+ Y A+ +A +A+ +IRTVA+F AE+++ + + P K+ + RG +SG +G+S
Sbjct: 859 RAYSRATSLAREAISNIRTVAAFSAEKQISEQFTCELSKPTKSALLRGHISGFGYGLSQC 918
Query: 90 VLYAVYACSFY 100
+ + YA +
Sbjct: 919 LAFCSYALGLW 929
>AT2G39480.1 | Symbols: PGP6 | P-glycoprotein 6 |
chr2:16478249-16484827 REVERSE LENGTH=1407
Length = 1407
Score = 52.0 bits (123), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 26 FSK--QKLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVS 83
FSK Q+++ AS V DAV +I TV +FCA KVM+LY+ + + ++ G+ G +
Sbjct: 1005 FSKGIQEMHRKASLVLEDAVRNIYTVVAFCAGNKVMELYRLQLQRILRQSFFHGMAIGFA 1064
Query: 84 FGISFFVLYAVYACSFYAGARLVE 107
FG S F+L+A A + A V+
Sbjct: 1065 FGFSQFLLFACNALLLWYTALSVD 1088
>AT3G28860.1 | Symbols: ATMDR1, ATMDR11, PGP19, MDR11, MDR1,
ATPGP19, ABCB19, ATABCB19 | ATP binding cassette
subfamily B19 | chr3:10870287-10877286 REVERSE
LENGTH=1252
Length = 1252
Score = 51.6 bits (122), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 41/80 (51%)
Query: 30 KLYEDASQVANDAVGSIRTVASFCAEEKVMKLYQERCEGPIKTGIRRGIVSGVSFGISFF 89
K + S +A + V +IRTVA+F A+ K++ L+ P K + R SG FG+S
Sbjct: 863 KAHAKTSMIAGEGVSNIRTVAAFNAQSKILSLFCHELRVPQKRSLYRSQTSGFLFGLSQL 922
Query: 90 VLYAVYACSFYAGARLVEDG 109
LY A + GA LV G
Sbjct: 923 ALYGSEALILWYGAHLVSKG 942