Miyakogusa Predicted Gene
- Lj4g3v2215580.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2215580.2 tr|B9HCN5|B9HCN5_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_819435 PE=4
SV=1,41.48,3e-18,tify,Tify; CCT_2,CO/COL/TOC1, conserved site;
TIFY,Tify; no description,Tify,CUFF.50530.2
(173 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G20900.1 | Symbols: JAZ12, TIFY3B | jasmonate-zim-domain prot... 91 4e-19
AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain prot... 79 2e-15
AT3G43440.2 | Symbols: JAZ11 | jasmonate-zim-domain protein 11 |... 76 1e-14
AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT... 54 5e-08
AT5G13220.1 | Symbols: JAZ10, TIFY9, JAS1 | jasmonate-zim-domain... 54 8e-08
AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain prot... 52 2e-07
AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 ... 52 2e-07
AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif f... 50 1e-06
AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain prot... 49 1e-06
>AT5G20900.1 | Symbols: JAZ12, TIFY3B | jasmonate-zim-domain protein
12 | chr5:7090883-7092201 FORWARD LENGTH=187
Length = 187
Score = 90.9 bits (224), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 71/111 (63%), Gaps = 3/111 (2%)
Query: 64 QFAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGTSNS- 122
Q I++ GS+ V+DG+P+EKV EI+ IAA A + + I +S P +P +S S
Sbjct: 57 QLTIFFGGSVTVFDGLPSEKVQEILRIAAKAMETKNSTSISPVSS-PALNRAPSFSSTSN 115
Query: 123 LASPPSVSFPAEKSSICR-LQEFPIARRQSLQRFLEKRRMRLGSKNPYTTT 172
+ASP + FP + S CR + PIARR SLQRFLEKRR RL +KNPY T+
Sbjct: 116 VASPAAQPFPIQPISFCRSTADLPIARRHSLQRFLEKRRDRLVNKNPYPTS 166
>AT3G43440.1 | Symbols: JAZ11, TIFY3A | jasmonate-zim-domain protein
11 | chr3:15367670-15369774 FORWARD LENGTH=238
Length = 238
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 63 TQFAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGTSNS 122
+Q I + GS V+DGIPAEKV EI+ IAAAAK+ E ++L +P+ + S S
Sbjct: 130 SQLTIIFGGSFSVFDGIPAEKVQEILHIAAAAKATET------INLTSINPALKRAISFS 183
Query: 123 LASPPSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMRLGSKNPYTTTT 173
AS + A + PIARR+SLQRF EKRR R PY+ TT
Sbjct: 184 NASTVACVSTA---------DVPIARRRSLQRFFEKRRHRFVHTKPYSATT 225
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 52/100 (52%), Gaps = 25/100 (25%)
Query: 63 TQFAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGTSNS 122
TQ I + GS V++G+PA+KV EI+ IA A K + +GI +P+ + S S
Sbjct: 44 TQLTIIFGGSCRVFNGVPAQKVQEIIRIAFAGKQTKNVTGI--------NPALNRALSFS 95
Query: 123 LASPPSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMR 162
+ + PIARR+SLQRFLEKRR R
Sbjct: 96 TVA-----------------DLPIARRRSLQRFLEKRRDR 118
>AT3G43440.2 | Symbols: JAZ11 | jasmonate-zim-domain protein 11 |
chr3:15367670-15369774 FORWARD LENGTH=152
Length = 152
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 15/111 (13%)
Query: 63 TQFAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGTSNS 122
TQ I + GS V++G+PA+KV EI+ IAAAAK+ E ++L +P+ + S S
Sbjct: 44 TQLTIIFGGSCRVFNGVPAQKVQEILHIAAAAKATET------INLTSINPALKRAISFS 97
Query: 123 LASPPSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMRLGSKNPYTTTT 173
AS + A + PIARR+SLQRF EKRR R PY+ TT
Sbjct: 98 NASTVACVSTA---------DVPIARRRSLQRFFEKRRHRFVHTKPYSATT 139
>AT1G74950.1 | Symbols: JAZ2, TIFY10B | TIFY domain/Divergent CCT
motif family protein | chr1:28148919-28150258 REVERSE
LENGTH=249
Length = 249
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 65 FAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGTSNSLA 124
I+Y G + V+D AEK E++ +A KS F + + + S+ + +A
Sbjct: 120 LTIFYGGRVMVFDDFSAEKAKEVIDLA---NKGSAKSFTCFTAEVNNNHSA--YSQKEIA 174
Query: 125 SPPS-VSFPAEKSSICRLQ--------EFPIARRQSLQRFLEKRRMRLGSKNPY 169
S P+ V PA+ ++ +Q E PIARR SL RFLEKR+ R+ SK PY
Sbjct: 175 SSPNPVCSPAKTAAQEPIQPNPASLACELPIARRASLHRFLEKRKDRITSKAPY 228
>AT5G13220.1 | Symbols: JAZ10, TIFY9, JAS1 | jasmonate-zim-domain
protein 10 | chr5:4219001-4220502 FORWARD LENGTH=197
Length = 197
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 21/115 (18%)
Query: 61 GRTQFAIYYNGSMHVYDGIPAEKVHEIMLIA--AAAKSAEMKSGIPFMSLIPTSPSSPQG 118
G I+YNGS+ V+ + K EIM +A AA+K E ++PT+ P+
Sbjct: 101 GTVPMTIFYNGSVSVFQ-VSRNKAGEIMKVANEAASKKDESSMETDLSVILPTT-LRPKL 158
Query: 119 TSNSLASPPSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMRLGSKNPYTTTT 173
+L + PIARR+SLQRFLEKR+ RL S +PY T+
Sbjct: 159 FGQNLEG-----------------DLPIARRKSLQRFLEKRKERLVSTSPYYPTS 196
>AT1G19180.1 | Symbols: JAZ1, TIFY10A | jasmonate-zim-domain protein
1 | chr1:6622312-6623271 FORWARD LENGTH=253
Length = 253
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 65 FAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEM-KSGIPFMSLIPTSPSSPQGTSNSL 123
I+Y G + V++ AEK E++ +A+ + + K+ S I T + +
Sbjct: 127 LTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIATIANQVPHPRKTT 186
Query: 124 ASPPSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMRLGSKNPY 169
P S P L E PIARR SL RFLEKR+ R+ SK PY
Sbjct: 187 TQEPIQSSPTP------LTELPIARRASLHRFLEKRKDRVTSKAPY 226
>AT1G19180.2 | Symbols: TIFY10A | jasmonate-zim-domain protein 1 |
chr1:6622708-6623271 FORWARD LENGTH=187
Length = 187
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 9/107 (8%)
Query: 65 FAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEM-KSGIPFMSLIPTSPSSPQGTSNSL 123
I+Y G + V++ AEK E++ +A+ + + K+ S I T +N +
Sbjct: 61 LTIFYAGQVIVFNDFSAEKAKEVINLASKGTANSLAKNQTDIRSNIAT-------IANQV 113
Query: 124 ASP-PSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMRLGSKNPY 169
P + + +SS L E PIARR SL RFLEKR+ R+ SK PY
Sbjct: 114 PHPRKTTTQEPIQSSPTPLTELPIARRASLHRFLEKRKDRVTSKAPY 160
>AT1G70700.2 | Symbols: TIFY7 | TIFY domain/Divergent CCT motif
family protein | chr1:26654951-26656804 FORWARD
LENGTH=243
Length = 243
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 64 QFAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGTSNSL 123
Q I+Y G++ V++ I +K IML A E P +P +N++
Sbjct: 119 QLTIFYGGTISVFNDISPDKAQAIMLCAGNGLKGETGDSKPVREAERMCRDTPVAATNAM 178
Query: 124 ASPPSVSFPAEKSSICRLQEFPIARRQSLQRFLEKRRMRLGSKNPY 169
+ S F A ++ + P AR+ SL RFLEKR+ RL S PY
Sbjct: 179 SMIES--FNAAPRNM--IPSVPQARKASLARFLEKRKERLMSAMPY 220
>AT1G17380.1 | Symbols: JAZ5, TIFY11A | jasmonate-zim-domain protein
5 | chr1:5955654-5957070 REVERSE LENGTH=274
Length = 274
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 18/120 (15%)
Query: 60 PGRTQFAIYYNGSMHVYDGIPAEKVHEIMLIAAAAKSAEMKSGIPFMSLIPTSPSSPQGT 119
PG +Q I++ G + VY+ P +K EIM +A AK P + +P + +
Sbjct: 94 PGSSQLTIFFGGKVLVYNEFPVDKAKEIMEVAKQAK--------PVTEINIQTPINDENN 145
Query: 120 SN-SLASPPSVSFPAEKSSICRLQEFP---------IARRQSLQRFLEKRRMRLGSKNPY 169
+N S P ++ P + + + + Q+ IARR SL RF KR+ R ++ PY
Sbjct: 146 NNKSSMVLPDLNEPTDNNHLTKEQQQQQEQNQIVERIARRASLHRFFAKRKDRAVARAPY 205