Miyakogusa Predicted Gene

Lj4g3v2215570.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215570.1 tr|G7JSE5|G7JSE5_MEDTR FYVE zinc finger family
protein OS=Medicago truncatula GN=MTR_4g036440 PE=4
S,69.33,2e-18,FYVE/PHD zinc finger,Zinc finger, FYVE/PHD-type; Ankyrin
repeat,Ankyrin repeat-containing domain; FY,CUFF.50528.1
         (289 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G26210.1 | Symbols:  | Ankyrin repeat family protein | chr2:1...   197   9e-51
AT2G26210.3 | Symbols:  | Ankyrin repeat family protein | chr2:1...   187   6e-48
AT2G26210.2 | Symbols:  | Ankyrin repeat family protein | chr2:1...   187   6e-48
AT3G58760.1 | Symbols:  | Integrin-linked protein kinase family ...    54   1e-07
AT4G18950.1 | Symbols:  | Integrin-linked protein kinase family ...    54   2e-07
AT3G14270.1 | Symbols: FAB1B | phosphatidylinositol-4-phosphate ...    50   2e-06
AT1G20110.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily ...    49   5e-06

>AT2G26210.1 | Symbols:  | Ankyrin repeat family protein |
           chr2:11157654-11159016 FORWARD LENGTH=190
          Length = 190

 Score =  197 bits (500), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 111/208 (53%), Positives = 130/208 (62%), Gaps = 27/208 (12%)

Query: 77  SDGVNNITDTISKLDIDGN----VDSKTLPSADNNPVSGIKECKCGMPLCICEAPAPSSD 132
           S+ VN++T+ +S+LDID N      S+T+            ECKCGMPLCIC AP  S+D
Sbjct: 4   SNKVNSLTEQVSRLDIDDNDMGLGGSETM------------ECKCGMPLCICVAPPKSTD 51

Query: 133 ALPQQKKISPAMTASSNPKPRKTDTVXXXXXXXXXXXXXXPFNLGHVTNVASARPQTDYE 192
                K   PA  A       K++                  N G  T      PQ DYE
Sbjct: 52  -----KPNPPATIAPVVLPQLKSEASAKSKGSTSSSNARSALNAGLDT------PQRDYE 100

Query: 193 VSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGAS 252
            SGEGLREAIKNGD A  KKLL EGVDANYRD+QG+S+LHLA +FNQTDI  +LMD GAS
Sbjct: 101 ASGEGLREAIKNGDSAGAKKLLKEGVDANYRDRQGMSVLHLAVLFNQTDIALMLMDHGAS 160

Query: 253 LKYKNAQGETPLDCAPATLQYKMRKKME 280
           L+YKNAQGETPLDCAPATLQYKMR+KM+
Sbjct: 161 LEYKNAQGETPLDCAPATLQYKMREKMK 188


>AT2G26210.3 | Symbols:  | Ankyrin repeat family protein |
           chr2:11157723-11159016 FORWARD LENGTH=167
          Length = 167

 Score =  187 bits (476), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 110/167 (65%), Gaps = 11/167 (6%)

Query: 114 ECKCGMPLCICEAPAPSSDALPQQKKISPAMTASSNPKPRKTDTVXXXXXXXXXXXXXXP 173
           ECKCGMPLCIC AP  S+D     K   PA  A       K++                 
Sbjct: 10  ECKCGMPLCICVAPPKSTD-----KPNPPATIAPVVLPQLKSEASAKSKGSTSSSNARSA 64

Query: 174 FNLGHVTNVASARPQTDYEVSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHL 233
            N G  T      PQ DYE SGEGLREAIKNGD A  KKLL EGVDANYRD+QG+S+LHL
Sbjct: 65  LNAGLDT------PQRDYEASGEGLREAIKNGDSAGAKKLLKEGVDANYRDRQGMSVLHL 118

Query: 234 AAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKME 280
           A +FNQTDI  +LMD GASL+YKNAQGETPLDCAPATLQYKMR+KM+
Sbjct: 119 AVLFNQTDIALMLMDHGASLEYKNAQGETPLDCAPATLQYKMREKMK 165


>AT2G26210.2 | Symbols:  | Ankyrin repeat family protein |
           chr2:11157723-11159016 FORWARD LENGTH=167
          Length = 167

 Score =  187 bits (476), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 99/167 (59%), Positives = 110/167 (65%), Gaps = 11/167 (6%)

Query: 114 ECKCGMPLCICEAPAPSSDALPQQKKISPAMTASSNPKPRKTDTVXXXXXXXXXXXXXXP 173
           ECKCGMPLCIC AP  S+D     K   PA  A       K++                 
Sbjct: 10  ECKCGMPLCICVAPPKSTD-----KPNPPATIAPVVLPQLKSEASAKSKGSTSSSNARSA 64

Query: 174 FNLGHVTNVASARPQTDYEVSGEGLREAIKNGDIAAVKKLLNEGVDANYRDKQGLSLLHL 233
            N G  T      PQ DYE SGEGLREAIKNGD A  KKLL EGVDANYRD+QG+S+LHL
Sbjct: 65  LNAGLDT------PQRDYEASGEGLREAIKNGDSAGAKKLLKEGVDANYRDRQGMSVLHL 118

Query: 234 AAVFNQTDIVFILMDSGASLKYKNAQGETPLDCAPATLQYKMRKKME 280
           A +FNQTDI  +LMD GASL+YKNAQGETPLDCAPATLQYKMR+KM+
Sbjct: 119 AVLFNQTDIALMLMDHGASLEYKNAQGETPLDCAPATLQYKMREKMK 165


>AT3G58760.1 | Symbols:  | Integrin-linked protein kinase family |
           chr3:21728756-21731740 FORWARD LENGTH=471
          Length = 471

 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%)

Query: 204 NGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETP 263
            GDI  + K+L+ G + +YRD    + LH+AA   +TD+V +L+  GA +  K+  G TP
Sbjct: 59  EGDIDGINKMLDSGTNVDYRDIDARTALHVAACQGRTDVVELLLSRGAKVDTKDRWGSTP 118

Query: 264 LDCAPATLQYKMRKKMEEGG 283
           L  A     + + K +E+ G
Sbjct: 119 LADAVYYKNHDVIKLLEKHG 138


>AT4G18950.1 | Symbols:  | Integrin-linked protein kinase family |
           chr4:10375685-10378129 FORWARD LENGTH=459
          Length = 459

 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 37/61 (60%)

Query: 204 NGDIAAVKKLLNEGVDANYRDKQGLSLLHLAAVFNQTDIVFILMDSGASLKYKNAQGETP 263
            GDI  +K+L++ G+DANYRD    + LH+AA     D+V +L+D  A +  K+  G TP
Sbjct: 53  EGDIEGIKELIDSGIDANYRDIDDRTALHVAACQGLKDVVELLLDRKAEVDPKDRWGSTP 112

Query: 264 L 264
            
Sbjct: 113 F 113


>AT3G14270.1 | Symbols: FAB1B | phosphatidylinositol-4-phosphate
           5-kinase family protein | chr3:4754624-4761185 FORWARD
           LENGTH=1791
          Length = 1791

 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 12/86 (13%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGL------YSNVRVC 60
           P Q    C  C C F    RRHHCR CGR  C + +++ +      L      +  +RVC
Sbjct: 38  PDQSCRVCYECDCQFTLINRRHHCRHCGRVFCGKCTANSIPFAPSDLRTPREDWERIRVC 97

Query: 61  ADCFNNSRSQE-VPHASSDGVNNITD 85
             CF      +  PH     V+NIT+
Sbjct: 98  NYCFRQWEQGDGGPH-----VSNITE 118


>AT1G20110.1 | Symbols:  | RING/FYVE/PHD zinc finger superfamily
           protein | chr1:6971554-6974578 FORWARD LENGTH=601
          Length = 601

 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 7   PFQEAARCVVCSCSFNTFRRRHHCRSCGRTLCNEHSSDQMALPQFGLYSNVRVCADCF 64
           P +  ++C  C   F  F RRHHCR+CG   C++ +  ++AL        VRVC  C 
Sbjct: 454 PDEAVSKCTSCGSDFGAFIRRHHCRNCGDVFCDKCTQGRIALTAEDNAPQVRVCDRCM 511