Miyakogusa Predicted Gene

Lj4g3v2215490.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215490.1 Non Chatacterized Hit- tr|G8DD51|G8DD51_9PHYC
Putative uncharacterized protein OS=Micromonas
pusilla,32.2,4e-18,NT5C,5'(3')-deoxyribonucleotidase; seg,NULL;
HAD-like,HAD-like domain; no description,HAD-like domai,CUFF.50523.1
         (367 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G33140.1 | Symbols:  | Haloacid dehalogenase-like hydrolase (...   351   4e-97

>AT4G33140.1 | Symbols:  | Haloacid dehalogenase-like hydrolase
           (HAD) superfamily protein | chr4:15981648-15984135
           FORWARD LENGTH=353
          Length = 353

 Score =  351 bits (901), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 158/208 (75%), Positives = 183/208 (87%)

Query: 160 SQKLVVAVDVDEVLGNFVSALNKFIADRYSSNHSLSEYHVYEFFKIWNCSRDEADIRVHE 219
           + K+VVAVD+DEVLGNFVSALN+FIADRY SNHS+SEYHVYEFFKIWNCSR+EAD+RVHE
Sbjct: 146 NDKIVVAVDIDEVLGNFVSALNRFIADRYLSNHSVSEYHVYEFFKIWNCSRNEADLRVHE 205

Query: 220 FFKTPYFKSGIHPLPGAKTALQKLSRFCSLSVVTSRQNVIKDHTIEWIEKNYPGLFHEIH 279
           FFKT YFK GIHPLPGA   L KLS++C +SVVTSRQN IK+HT+EWIE ++PGLF +IH
Sbjct: 206 FFKTSYFKKGIHPLPGAHKTLHKLSKYCDMSVVTSRQNAIKEHTLEWIEIHFPGLFKQIH 265

Query: 280 FGNHFALDGLSRPKSEICRSLNAKVLIDDNPRYAIECAEAGIEVLLFDYENSYPWSKNEA 339
           FGNHFAL G SRPKSEICRS  A++LIDDNPRYA ECA  G++VLLFDYENSYPWSK E+
Sbjct: 266 FGNHFALHGESRPKSEICRSFGAEILIDDNPRYAEECANIGMKVLLFDYENSYPWSKTES 325

Query: 340 VDKHPLVTKVKNWEEVEQQLMSVMARIC 367
           VD+HPLVT+V NWEEVEQQ++S+    C
Sbjct: 326 VDRHPLVTRVHNWEEVEQQILSLAVSKC 353