Miyakogusa Predicted Gene

Lj4g3v2215050.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2215050.1 Non Chatacterized Hit- tr|I1MS46|I1MS46_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max PE=4,52.38,1e-16,
,CUFF.50484.1
         (86 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G19240.1 | Symbols:  | unknown protein; Has 24 Blast hits to ...    67   4e-12

>AT1G19240.1 | Symbols:  | unknown protein; Has 24 Blast hits to 24
           proteins in 11 species: Archae - 0; Bacteria - 0;
           Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
           Eukaryotes - 0 (source: NCBI BLink). |
           chr1:6649562-6650384 REVERSE LENGTH=104
          Length = 104

 Score = 66.6 bits (161), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)

Query: 25  GNSHGRAHDSSLVLATRPSRQALSYWTCSKLCAICFVAGVVFGYTLRGRVKRWASKILRK 84
           GN        S  L TRP    +S WTCSKLCA+ FVAGV  GYTL+ RV+RWASK+LR+
Sbjct: 42  GNLTTTYDAGSGTLVTRPP-SGVSVWTCSKLCAVFFVAGVFVGYTLKRRVRRWASKLLRR 100

Query: 85  L 85
           +
Sbjct: 101 I 101