Miyakogusa Predicted Gene
- Lj4g3v2203590.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2203590.1 CUFF.50458.1
(550 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 513 e-145
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 513 e-145
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 219 3e-57
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 217 2e-56
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 3e-55
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 212 5e-55
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 211 9e-55
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 209 4e-54
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 1e-53
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 207 2e-53
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 206 3e-53
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 206 4e-53
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 1e-52
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 203 2e-52
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 202 4e-52
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 201 9e-52
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 199 4e-51
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 4e-51
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 199 5e-51
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 197 2e-50
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 2e-50
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 196 2e-50
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 5e-50
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 195 7e-50
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 194 1e-49
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 191 9e-49
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 191 1e-48
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 191 2e-48
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 190 2e-48
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 189 5e-48
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 188 1e-47
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 187 2e-47
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 186 5e-47
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 6e-47
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 6e-47
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 8e-47
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 185 9e-47
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 183 2e-46
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 183 3e-46
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 182 4e-46
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 8e-46
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 181 1e-45
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 180 2e-45
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 180 3e-45
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 3e-45
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 179 6e-45
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 177 2e-44
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 176 3e-44
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 176 4e-44
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 175 6e-44
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 1e-43
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 174 1e-43
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 173 2e-43
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 173 3e-43
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 170 2e-42
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 169 4e-42
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 169 6e-42
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 168 8e-42
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 168 1e-41
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 166 4e-41
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 165 7e-41
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 165 9e-41
AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 164 2e-40
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 163 3e-40
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 5e-40
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 162 5e-40
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 7e-40
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 162 8e-40
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 160 2e-39
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 160 2e-39
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 159 4e-39
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 156 3e-38
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 155 6e-38
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 155 7e-38
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 154 1e-37
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 154 2e-37
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 153 4e-37
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 5e-37
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 152 6e-37
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 152 7e-37
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 151 1e-36
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 151 1e-36
AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 150 2e-36
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 3e-36
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 4e-36
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 149 5e-36
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 149 6e-36
AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 147 2e-35
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 146 3e-35
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 145 7e-35
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 144 1e-34
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 144 2e-34
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 142 8e-34
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 141 1e-33
AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 141 1e-33
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 141 1e-33
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 141 1e-33
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 138 8e-33
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 2e-32
AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 137 3e-32
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 136 4e-32
AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 136 5e-32
AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 135 7e-32
AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 134 2e-31
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 134 2e-31
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 133 4e-31
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 132 5e-31
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 132 7e-31
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 131 1e-30
AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 130 2e-30
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 130 2e-30
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 129 4e-30
AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 129 7e-30
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 128 9e-30
AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 128 1e-29
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 127 2e-29
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 2e-29
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 127 2e-29
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 3e-29
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 127 3e-29
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 126 3e-29
AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 126 4e-29
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 6e-29
AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 125 8e-29
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 124 1e-28
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 124 2e-28
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 122 7e-28
AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 121 1e-27
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 121 1e-27
AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 121 1e-27
AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 2e-27
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 120 3e-27
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 120 4e-27
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 119 6e-27
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 117 2e-26
AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 117 2e-26
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 2e-26
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 117 2e-26
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 117 3e-26
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 117 3e-26
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 3e-26
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 116 4e-26
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 116 5e-26
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 6e-26
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 115 7e-26
AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 115 8e-26
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 115 9e-26
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 114 2e-25
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 113 4e-25
AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 112 8e-25
AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 111 1e-24
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 2e-24
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 109 4e-24
AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) ... 109 6e-24
AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 107 3e-23
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 3e-23
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 106 4e-23
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 106 4e-23
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 106 5e-23
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 105 6e-23
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 105 1e-22
AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 105 1e-22
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 104 2e-22
AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat (... 104 2e-22
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 103 3e-22
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 103 4e-22
AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 102 5e-22
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 102 7e-22
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 101 1e-21
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 101 1e-21
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 101 2e-21
AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 101 2e-21
AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 100 3e-21
AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 100 4e-21
AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 4e-21
AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 | c... 99 6e-21
AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 6e-21
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 8e-21
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 99 9e-21
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 1e-20
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 96 5e-20
AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 5e-20
AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 96 8e-20
AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat (TPR)-... 96 8e-20
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 95 1e-19
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 2e-19
AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 94 2e-19
AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 2e-19
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 94 3e-19
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 6e-19
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 92 1e-18
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 91 1e-18
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 2e-18
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 91 2e-18
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 91 3e-18
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 3e-18
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 4e-18
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 6e-18
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 7e-18
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 8e-18
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 1e-17
AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 1e-17
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 88 2e-17
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 88 2e-17
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 2e-17
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 3e-17
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 87 4e-17
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 4e-17
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 86 5e-17
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 86 7e-17
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 7e-17
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT1G80150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 86 8e-17
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G80550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 1e-16
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 2e-16
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 84 2e-16
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 84 2e-16
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 84 2e-16
AT1G11900.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 2e-16
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 84 3e-16
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 84 3e-16
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 4e-16
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 83 4e-16
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 83 4e-16
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 83 6e-16
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 83 6e-16
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 83 6e-16
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 82 7e-16
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 82 7e-16
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 7e-16
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 8e-16
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 82 9e-16
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 9e-16
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 1e-15
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 82 1e-15
AT2G01390.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G15280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT4G38150.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT4G38150.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT1G10270.1 | Symbols: GRP23 | glutamine-rich protein 23 | chr1:... 80 4e-15
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 80 4e-15
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 4e-15
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 80 4e-15
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 4e-15
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 80 5e-15
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT3G48250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 6e-15
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 6e-15
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 6e-15
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 7e-15
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 79 7e-15
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 8e-15
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 9e-15
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 79 9e-15
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 1e-14
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 79 1e-14
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 79 1e-14
AT5G67570.1 | Symbols: EMB246, DG1, EMB1408 | Tetratricopeptide ... 78 2e-14
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT2G18520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 2e-14
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 3e-14
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 3e-14
AT2G27800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 4e-14
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G46610.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 77 4e-14
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 76 5e-14
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 5e-14
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 6e-14
AT3G60040.1 | Symbols: | F-box family protein | chr3:22175937-2... 76 6e-14
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 76 7e-14
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 76 7e-14
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 8e-14
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT1G30610.1 | Symbols: EMB88, EMB2279 | pentatricopeptide (PPR) ... 75 1e-13
AT4G01400.1 | Symbols: | FUNCTIONS IN: molecular_function unkno... 75 1e-13
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 1e-13
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 2e-13
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 74 2e-13
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 3e-13
AT4G21880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 74 4e-13
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 4e-13
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 73 5e-13
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 5e-13
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 73 5e-13
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 73 6e-13
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 73 7e-13
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 72 7e-13
AT2G40240.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT5G60960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 9e-13
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G30610.2 | Symbols: EMB2279 | pentatricopeptide (PPR) repeat-... 72 1e-12
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 71 2e-12
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 71 2e-12
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 71 2e-12
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT5G02830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT4G02820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G56030.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 70 3e-12
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 70 3e-12
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 4e-12
AT2G28050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 5e-12
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 69 6e-12
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 8e-12
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 69 8e-12
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 69 9e-12
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 69 1e-11
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 69 1e-11
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 2e-11
AT1G76280.3 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 2e-11
AT5G15980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 67 3e-11
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 67 3e-11
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 3e-11
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 4e-11
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 67 5e-11
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G04790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 5e-11
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 5e-11
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 9e-11
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 65 9e-11
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G60770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G07590.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 64 2e-10
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G30780.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT5G36300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 3e-10
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 5e-10
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 63 6e-10
AT1G01970.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 62 8e-10
AT5G66631.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 8e-10
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 61 2e-09
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT1G76280.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 60 3e-09
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 60 4e-09
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 60 5e-09
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 6e-09
AT5G03560.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT1G68980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT2G15820.1 | Symbols: OTP51 | endonucleases | chr2:6888734-6891... 59 8e-09
AT1G69290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT1G06270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 3e-08
AT3G60960.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 3e-08
AT1G03100.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 4e-08
AT5G28380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 5e-08
AT5G28340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 56 6e-08
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 7e-08
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 1e-07
AT1G76280.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G46870.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 2e-07
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT3G02490.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 54 3e-07
AT4G14190.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 3e-07
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 4e-07
AT5G27300.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT5G27300.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 8e-07
AT1G26460.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT4G21170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 9e-07
AT1G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G80270.3 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 1e-06
AT1G80270.2 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 1e-06
AT1G80270.1 | Symbols: PPR596 | PENTATRICOPEPTIDE REPEAT 596 | c... 52 1e-06
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G20710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 3e-06
AT2G20710.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 4e-06
AT1G15480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 50 5e-06
AT5G09450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 49 7e-06
>AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/487 (52%), Positives = 342/487 (70%), Gaps = 4/487 (0%)
Query: 49 PEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRL-NNPILGFKFFQFTREK 107
PEAW VKIVSTLF++ Y K+L P + EVVK+L NNP +GF+F++F+R K
Sbjct: 37 PEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFK 96
Query: 108 LNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDV 167
LN+ HSFWTYN+L RSLC+ GLH A +++CM+ DG P++RLLGFLVSSFA +L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+ LL Q +V+ +V ++LL+ LVK ++++DA+ LF E +R S +T TFN+L+
Sbjct: 157 ATALLL--QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
GLC G ++A + L M FGC PDIVTYNTL+ G C+ E+++A ++ K+V S S
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+V +YT++ISGYCK KM+EASSL D+M R G P TFN L+DG+ K G M +A I
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
KM+ GC PDVVTFTSLI+GYCRVG+V+ G LW EMN R + + T+S+LI+ LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFT 466
NRL +AR+LL QL DI+PQP +YN VIDG+CK+G V+EAN IV EME +KCKPDK T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
FTILI GHCMKGR +A+ IF+KM+A GCSPD+ITV L SCLLK+GM EA + +
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 527 ENQGDSL 533
+ Q +++
Sbjct: 515 KGQSNNV 521
>AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:2328000-2329610 REVERSE
LENGTH=536
Length = 536
Score = 513 bits (1320), Expect = e-145, Method: Compositional matrix adjust.
Identities = 257/487 (52%), Positives = 342/487 (70%), Gaps = 4/487 (0%)
Query: 49 PEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRL-NNPILGFKFFQFTREK 107
PEAW VKIVSTLF++ Y K+L P + EVVK+L NNP +GF+F++F+R K
Sbjct: 37 PEAWLVKIVSTLFVYRVPDSDLCFCYLSKNLNPFISFEVVKKLDNNPHIGFRFWEFSRFK 96
Query: 108 LNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDV 167
LN+ HSFWTYN+L RSLC+ GLH A +++CM+ DG P++RLLGFLVSSFA +L
Sbjct: 97 LNIRHSFWTYNLLTRSLCKAGLHDLAGQMFECMKSDGVSPNNRLLGFLVSSFAEKGKLHF 156
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+ LL Q +V+ +V ++LL+ LVK ++++DA+ LF E +R S +T TFN+L+
Sbjct: 157 ATALLL--QSFEVEGCCMVVNSLLNTLVKLDRVEDAMKLFDEHLRFQSCNDTKTFNILIR 214
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
GLC G ++A + L M FGC PDIVTYNTL+ G C+ E+++A ++ K+V S S
Sbjct: 215 GLCGVGKAEKALELLGVMSGFGCEPDIVTYNTLIQGFCKSNELNKASEMFKDVKSGSVCS 274
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+V +YT++ISGYCK KM+EASSL D+M R G P TFN L+DG+ K G M +A I
Sbjct: 275 PDVVTYTSMISGYCKAGKMREASSLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMLTAEEI 334
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
KM+ GC PDVVTFTSLI+GYCRVG+V+ G LW EMN R + + T+S+LI+ LC
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVSQGFRLWEEMNARGMFPNAFTYSILINALCN 394
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFT 466
NRL +AR+LL QL DI+PQP +YN VIDG+CK+G V+EAN IV EME +KCKPDK T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEANVIVEEMEKKKCKPDKIT 454
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
FTILI GHCMKGR +A+ IF+KM+A GCSPD+ITV L SCLLK+GM EA + +
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQIAR 514
Query: 527 ENQGDSL 533
+ Q +++
Sbjct: 515 KGQSNNV 521
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 219 bits (558), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 221/411 (53%), Gaps = 2/411 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T N L+ LC G + A LL D M G P++ G +++ + ++ ELL +
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++++AV Y ++ L KH LD+A LF E+ T+N+L+GG C+AG
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D+ K L M +P++VT++ L+ + ++ A +L KE+ + +P+ +YT+
Sbjct: 315 DDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEM-IHRGIAPDTITYTS 373
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+CK + + +A+ + D M G PN TFN LI+G+ K +D L +++KM G
Sbjct: 374 LIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRG 433
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
D VT+ +LI+G+C +GK+N +L+ EM +R + ++ T+ +L+ LC + ++A
Sbjct: 434 VVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKAL 493
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
++ +++++ + IYN +I G C + VD+A + + K KP T+ I+I G
Sbjct: 494 EIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGL 553
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
C KG +A ++F KM G +PD T IL L G ++ ++ E L
Sbjct: 554 CKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 128/423 (30%), Positives = 215/423 (50%), Gaps = 2/423 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL + T++ L+ LC +G S A L D M G PD + LV+ L +
Sbjct: 151 KLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEA 210
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ L+ + Q NAV Y +L+V+ K + A+ L R++ + L+ +++++
Sbjct: 211 EAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G +D AF N M G + +I+TYN L+ G C D LL+++ +K K
Sbjct: 271 DGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM-IKRKI 329
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
+PNV +++ +I + K K++EA L EM G P+ T+ SLIDGF K ++D A
Sbjct: 330 NPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQ 389
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+ M+ GC P++ TF LI GYC+ +++ GL+L+ +M+ R + A T++ LI C
Sbjct: 390 MVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 449
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKF 465
+ +L A++L +++ + P Y ++DG C +G ++A I ++E+ K + D
Sbjct: 450 ELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIG 509
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+ I+I G C + DA +F + G P T I+ L K G EA + +
Sbjct: 510 IYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKM 569
Query: 526 HEN 528
E+
Sbjct: 570 EED 572
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/352 (30%), Positives = 180/352 (51%), Gaps = 2/352 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L S+ A + D+ L + + + N +++ + KL A ++++
Sbjct: 94 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 153
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
T TF+ L+ GLC G V EA + ++ M G PD++T NTL++GLC + A
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L+ ++ ++ PN +Y V++ CK + A L +M+ K +A ++ +IDG
Sbjct: 214 LLIDKM-VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDG 272
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
K G++D+A ++ +M G +++T+ LI G+C G+ + G L +M R I+ +
Sbjct: 273 LCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPN 332
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ TFSVLI K +L+EA +L +++ I P Y +IDG+CK ++D+AN +V
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
M K C P+ TF ILI G+C R D + +F KM G D +T L
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTL 444
Score = 163 bits (413), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 181/374 (48%), Gaps = 2/374 (0%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
VL V+ + L + + E+ N+ Y++++ LC+ G +A L++ M
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEER-NIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMK 292
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G + L+ F R D +LL + K+ N V + L+ VK KL +A
Sbjct: 293 GITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREA 352
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
L +E++ +T T+ L+ G C +D+A + ++ M S GC P+I T+N L++G
Sbjct: 353 EELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILING 412
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
C+ +D +L +++ L+ + V +Y T+I G+C+L K+ A LF EM P
Sbjct: 413 YCKANRIDDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLNVAKELFQEMVSRKVPP 471
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
N T+ L+DG G + AL I++K+ D+ + +I G C KV+ DL+
Sbjct: 472 NIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLF 531
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+ + + + T++++I LCK L EA L R+++ P YN +I +
Sbjct: 532 CSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGD 591
Query: 444 GNVDEANAIVVEME 457
G+ ++ ++ E++
Sbjct: 592 GDATKSVKLIEELK 605
Score = 145 bits (367), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 153/304 (50%), Gaps = 2/304 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
K DDAI LFR+++ S F+ L + D M G + ++ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+++ CR +++ A + ++ +K + PN +++T+I+G C ++ EA L D M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKI-IKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVE 186
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KP+ T N+L++G G A+ + KM+ +GC P+ VT+ ++ C+ G+
Sbjct: 187 MGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTAL 246
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
++L +M RNI +S++I LCK L A +L +++ I YN +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIG 306
Query: 439 GYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G+C +G D+ ++ +M + K P+ TF++LI +G+ +A + +M+ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAP 366
Query: 498 DEIT 501
D IT
Sbjct: 367 DTIT 370
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 142/299 (47%), Gaps = 1/299 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ + T+++L+ S ++G A+ L+ M G PD+ L+ F + LD
Sbjct: 326 KRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLD 385
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ +++ N ++ L++ K N++DD + LFR++ +T T+N L+
Sbjct: 386 KANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLI 445
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
G C G ++ A + M S P+IVTY LL GLC E ++A ++ +++ KSK
Sbjct: 446 QGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE-KSKM 504
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
++ Y +I G C SK+ +A LF + G KP T+N +I G K G + A
Sbjct: 505 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAEL 564
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+++KM G PD T+ LI + G + L E+ S T ++I L
Sbjct: 565 LFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
>AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr5:15895729-15897972
FORWARD LENGTH=747
Length = 747
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 221/417 (52%), Gaps = 6/417 (1%)
Query: 114 FWTYNMLLRSLCQKGLHSS-AKLLYDCMR--FDGKLPDSRLLGFLVSSFALVDRLDVSKE 170
+ T +L + K L A L++ ++ +D S + +V S++ + +D +
Sbjct: 96 YKTAQILAEDVAAKTLDDEYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALS 155
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNK-LDDAICLFRELMRSHSHLETSTFNVLMGGL 229
++ AQ + + Y+ +L ++ + + A +F+E++ S T+N+L+ G
Sbjct: 156 IVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGF 215
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C AG++D A + M + GC P++VTYNTL+ G C+++++D LL+ + LK PN
Sbjct: 216 CFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKG-LEPN 274
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
+ SY VI+G C+ +MKE S + EM+R G + T+N+LI G+ K GN AL ++
Sbjct: 275 LISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+ML HG P V+T+TSLI C+ G +N ++ +M R + + T++ L+ +
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFT 468
+ EA +LR++ P YN +I+G+C +G +++A A++ +M+EK PD +++
Sbjct: 395 YMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYS 454
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+++G C +A+ + +M+ G PD IT L + EA + E +
Sbjct: 455 TVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEM 511
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 122/433 (28%), Positives = 218/433 (50%), Gaps = 17/433 (3%)
Query: 109 NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
V + +TYN+L+R C G A L+D M G LP+ L+ + + ++D
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+LL ++ N + Y+ +++ L + ++ + + E+ R L+ T+N L+ G
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
C G+ +A M G +P ++TY +L+H +C+ ++RA + L ++ ++ P
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG-LCP 378
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
N R+YTT++ G+ + M EA + EM+ +G P+ T+N+LI+G G M+ A+ +
Sbjct: 379 NERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVL 438
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
+ M G PDVV++++++ G+CR V+ L + EM + I T+S LI C+
Sbjct: 439 EDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQ 498
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF 467
R +EA DL ++ R + P Y +I+ YC G++++A + EM EK PD T+
Sbjct: 499 RRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTY 558
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL----SSCLLKS----------- 512
++LI G + R +A + K+ P ++T L S+ KS
Sbjct: 559 SVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMK 618
Query: 513 GMPGEAARIKESL 525
GM EA ++ ES+
Sbjct: 619 GMMTEADQVFESM 631
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 125/437 (28%), Positives = 210/437 (48%), Gaps = 18/437 (4%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
GFK + K + + +YN+++ LC++G + M G D L+
Sbjct: 259 GFKLLRSMALK-GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLI 317
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
+ + + AE + + + + Y +L+ + K ++ A+ ++
Sbjct: 318 KGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLC 377
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
T+ L+ G G ++EA++ L M G SP +VTYN L++G C +++ A +
Sbjct: 378 PNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAV 437
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
L+++ K SP+V SY+TV+SG+C+ + EA + EM G KP+ T++SLI GF
Sbjct: 438 LEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
+ A +Y++ML G PPD T+T+LI YC G + L L +EM + + +
Sbjct: 497 EQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVV 556
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID---------------GYC 441
T+SVLI+ L K +R +EA+ LL +L + VP Y+ +I+ G+C
Sbjct: 557 TYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 442 KSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
G + EA+ + M K KPD + I+I GHC G A ++ +M+ +G +
Sbjct: 617 MKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTV 676
Query: 501 TVRILSSCLLKSGMPGE 517
TV L L K G E
Sbjct: 677 TVIALVKALHKEGKVNE 693
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/437 (22%), Positives = 198/437 (45%), Gaps = 52/437 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L++ C++G A +++ M G P L+ S ++ + E L +
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + N Y L+ + +++A + RE+ + T+N L+ G C G +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++A L M+ G SPD+V+Y+T+L G CR +VD A + +E+ ++ P+ +Y++
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM-VEKGIKPDTITYSS 490
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+C+ + KEA L++EM R G P+ FT+ +LI+ + G+++ AL ++ +M+ G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550
Query: 356 CPPDVVTFT--------------------------------------------------S 365
PDVVT++ S
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVS 610
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
LI+G+C G + ++ M +N ++++I C++ +++A L +++ ++
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAI 484
+ ++ K G V+E N+++V + C+ + +L+ + +G +
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 485 VIFYKMLATGCSPDEIT 501
+ +M G P+ I+
Sbjct: 731 DVLAEMAKDGFLPNGIS 747
>AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26201012-26203759 REVERSE
LENGTH=915
Length = 915
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 132/402 (32%), Positives = 204/402 (50%), Gaps = 3/402 (0%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
+ +TYN ++ C+ G A + G PD L+ + LD + ++
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E + N V Y +L+ L ++D+A+ LF ++ T+ VL+ LC +
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
EA + M G P+I TY L+ LC + ++AR+LL ++ L+ PNV +
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM-LEKGLMPNVIT 395
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +I+GYCK +++A + + M+ PN T+N LI G+ K N+ A+G+ KML
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKML 454
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
PDVVT+ SLI+G CR G + L MN R + T++ +I LCKS R++
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
EA DL L++ + P +Y +IDGYCK+G VDEA+ ++ +M K C P+ TF LI
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
G C G+ +A ++ KM+ G P T IL LLK G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDG 616
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 120/388 (30%), Positives = 191/388 (49%), Gaps = 5/388 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L++SLC S A L M G P+ L+ S + + ++ELL +
Sbjct: 325 TYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM 384
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGD 234
+ N + Y+ L++ K ++DA+ + ELM S T T+N L+ G C + +
Sbjct: 385 LEKGLMPNVITYNALINGYCKRGMIEDAVDVV-ELMESRKLSPNTRTYNELIKGYCKS-N 442
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
V +A LN M PD+VTYN+L+ G CR D A LL + + P+ +YT
Sbjct: 443 VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRG-LVPDQWTYT 501
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++I CK +++EA LFD +++ G PN + +LIDG+ K G +D A + +KML
Sbjct: 502 SMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSK 561
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
C P+ +TF +LI G C GK+ L +M + ++ T ++LI L K A
Sbjct: 562 NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHA 621
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAG 473
+Q+ + P Y I YC+ G + +A ++ +M E PD FT++ LI G
Sbjct: 622 YSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKG 681
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ G+ A + +M TGC P + T
Sbjct: 682 YGDLGQTNFAFDVLKRMRDTGCEPSQHT 709
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 119/406 (29%), Positives = 193/406 (47%), Gaps = 41/406 (10%)
Query: 156 VSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS 215
++ F LVD + K++ E +KV N Y+ +++ K +++A +++ +
Sbjct: 193 LARFGLVDEM---KQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGL 249
Query: 216 HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARD 275
+ T+ L+ G C D+D AFK N M GC + V Y L+HGLC + +D A D
Sbjct: 250 DPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMD 309
Query: 276 LLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
L ++ F P VR+YT +I C + EA +L EM+ +G KPN T+ LID
Sbjct: 310 LFVKMKDDECF-PTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
+ A + +ML G P+V+T+ +LI GYC+ G + +D+ M +R +S +
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNT 428
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
T++ LI CKSN + +A +L ++ ++P YN +IDG C+SGN D A ++
Sbjct: 429 RTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487
Query: 456 M-------------------------EEKC-----------KPDKFTFTILIAGHCMKGR 479
M EE C P+ +T LI G+C G+
Sbjct: 488 MNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGK 547
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+A ++ KML+ C P+ +T L L G EA ++E +
Sbjct: 548 VDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKM 593
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 159/329 (48%), Gaps = 45/329 (13%)
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
LC + DE F+ L GC YNTLL+ L R VD + + E+ L+ K P
Sbjct: 165 LCRKMNKDERFE-LKYKLIIGC------YNTLLNSLARFGLVDEMKQVYMEM-LEDKVCP 216
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
N+ +Y +++GYCKL ++EA+ ++ +G P+ FT+ SLI G+ + ++DSA ++
Sbjct: 217 NIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVF 276
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW------------------------- 383
+M GC + V +T LI G C +++ +DL+
Sbjct: 277 NEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGS 336
Query: 384 ----------HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
EM I ++HT++VLI LC + ++AR+LL Q+ ++P Y
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 434 NHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
N +I+GYCK G +++A +V ME K P+ T+ LI G+C K A+ + KML
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYC-KSNVHKAMGVLNKMLE 455
Query: 493 TGCSPDEITVRILSSCLLKSGMPGEAARI 521
PD +T L +SG A R+
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRL 484
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 167/342 (48%), Gaps = 3/342 (0%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y+ LL+ L + +D+ ++ E++ T+N ++ G C G+V+EA ++++ +
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
G PD TY +L+ G C+ K++D A + E+ LK N +YT +I G C ++
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG-CRRNEVAYTHLIHGLCVARRI 304
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
EA LF +M P T+ LI AL + K+M G P++ T+T L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I+ C K +L +M + + ++ T++ LI+ CK +++A D++ ++ +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIV 485
P YN +I GYCKS NV +A ++ +M E K PD T+ LI G C G A
Sbjct: 425 SPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483
Query: 486 IFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+ M G PD+ T + L KS EA + +SL +
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 118/460 (25%), Positives = 195/460 (42%), Gaps = 69/460 (15%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVD------RLDVSK 169
TYN L++ C+ +H + +L K+ + ++L +V+ +L+D D +
Sbjct: 430 TYNELIKGYCKSNVHKAMGVL-------NKMLERKVLPDVVTYNSLIDGQCRSGNFDSAY 482
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
LL+ + + Y +++ L K ++++A LF L + + + L+ G
Sbjct: 483 RLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGY 542
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C AG VDEA L M S C P+ +T+N L+HGLC ++ A LL+E +K P
Sbjct: 543 CKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT-LLEEKMVKIGLQPT 601
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V + T +I K A S F +M SGTKP+A T+ + I + + G + A +
Sbjct: 602 VSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMA 661
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL---- 405
KM +G PD+ T++SLI+GY +G+ N+ D+ M S HTF LI +L
Sbjct: 662 KMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMK 721
Query: 406 -----------CKSNRLQE---ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
C + + E +LL ++ + P Y +I G C+ GN+ A
Sbjct: 722 YGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEK 781
Query: 452 IVVEME--EKCKPDKFTFT-----------------------------------ILIAGH 474
+ M+ E P + F +LI G
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGL 841
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
KG +F +L G DE+ +I+ + K G+
Sbjct: 842 YKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGL 881
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 1/271 (0%)
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
+D R + K+ + K+ + Y T+++ + + E ++ EM PN +T+N
Sbjct: 163 LDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYN 222
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
+++G+ K+GN++ A K++ G PD T+TSLI GYC+ ++ +++EM +
Sbjct: 223 KMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLK 282
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
+ ++ LI LC + R+ EA DL ++K + P Y +I C S EA
Sbjct: 283 GCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEA 342
Query: 450 NAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
+V EMEE KP+ T+T+LI C + + A + +ML G P+ IT L +
Sbjct: 343 LNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALING 402
Query: 509 LLKSGMPGEAARIKESLHENQGDSLKKSYYE 539
K GM +A + E + + ++Y E
Sbjct: 403 YCKRGMIEDAVDVVELMESRKLSPNTRTYNE 433
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/315 (20%), Positives = 128/315 (40%), Gaps = 18/315 (5%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K+ + + T +L+ L + G A + M G PD+ + ++ RL
Sbjct: 595 KIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLL 654
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+++++A+ + N V + Y +L+ + + A + + + + TF L+
Sbjct: 655 DAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLI 714
Query: 227 G---------------GLCSAGDV---DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
LC+ ++ D + L M +P+ +Y L+ G+C +
Sbjct: 715 KHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVG 774
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+ A + + SP+ + ++S CKL K EA+ + D+M G P +
Sbjct: 775 NLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESC 834
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
LI G K G + +++ +L G D + + +I+G + G V +L++ M
Sbjct: 835 KVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEK 894
Query: 389 RNISASLHTFSVLIS 403
S T+S+LI
Sbjct: 895 NGCKFSSQTYSLLIE 909
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/273 (20%), Positives = 121/273 (44%), Gaps = 20/273 (7%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +++ C++G A+ + MR +G PD L+ + + + + + ++L
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 176 QCNKVQVNAVVYDNLLSVLV-----KHNKLDDAICLFRELMRSHSHLE------------ 218
+ + + + +L+ L+ K + +C +M + +E
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 219 -TSTFNVLMGGLCSAGDVDEAFKFLNGM-RSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
++ L+ G+C G++ A K + M R+ G SP + +N LL C++K+ + A +
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
+ ++ P + S +I G K + + +S+F + + G + + +IDG
Sbjct: 819 VDDMICVGHL-PQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVG 877
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
K G +++ ++ M +GC T++ LIEG
Sbjct: 878 KQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 139/485 (28%), Positives = 226/485 (46%), Gaps = 53/485 (10%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL +N LL LC + S A L D M G P L LV+ L ++
Sbjct: 151 KLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ L+ Q N V Y +L+V+ K + A+ L R++ + L+ +++++
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G +D AF N M G DI+TYNTL+ G C D LL+++ +K K
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM-IKRKI 329
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
SPNV +++ +I + K K++EA L EM + G PN T+NSLIDGF K ++ A+
Sbjct: 330 SPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQ 389
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+ M+ GC PD++TF LI GYC+ +++ GL+L+ EM+ R + A+ T++ L+ C
Sbjct: 390 MVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFC 449
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK------- 459
+S +L+ A+ L +++ + P Y ++DG C +G +++A I ++E+
Sbjct: 450 QSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIG 509
Query: 460 -----------------------------CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
K D + I+I+ C K A ++F KM
Sbjct: 510 IYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKM 569
Query: 491 LATGCSPDEITVRILSSCLL----------------KSGMPGEAARIKESLHENQGDSLK 534
G +PDE+T IL L SG P + + +K ++ L
Sbjct: 570 TEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVINMLSSGELD 629
Query: 535 KSYYE 539
KS+ +
Sbjct: 630 KSFLD 634
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 115/463 (24%), Positives = 210/463 (45%), Gaps = 18/463 (3%)
Query: 31 FTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKR 90
TL L C G ++ ++V T F + VL+ K +L +E++++
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRK 253
Query: 91 LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSR 150
+ E+ N+ Y++++ LC+ G +A L++ M G D
Sbjct: 254 M--------------EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 299
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
L+ F R D +LL + K+ N V + L+ VK KL +A L +E+
Sbjct: 300 TYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEM 359
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
M+ T T+N L+ G C ++EA + ++ M S GC PDI+T+N L++G C+ +
Sbjct: 360 MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRI 419
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D +L +E+ L+ + N +Y T++ G+C+ K++ A LF EM +P+ ++
Sbjct: 420 DDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
L+DG G ++ AL I+ K+ D+ + +I G C KV+ DL+ + +
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKG 538
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
+ ++++IS LC+ + L +A L R++ P YN +I + + A
Sbjct: 539 VKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598
Query: 451 AIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
++ EM+ P + ++ G + F ML+T
Sbjct: 599 ELIEEMKSSGFPADVSTVKMVINMLSSGELDKS---FLDMLST 638
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 155/324 (47%), Gaps = 2/324 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
K DDA+ LFR++++S FN L + + M S G + I T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+++ CR +++ A + ++ +K + P+ + T+++G C ++ EA L D M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKI-MKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KP T N+L++G G + A+ + +M+ G P+ VT+ ++ C+ G+
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
++L +M RNI +S++I LCK L A +L +++ YN +I
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306
Query: 439 GYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G+C +G D+ ++ +M + K P+ TF++LI +G+ +A + +M+ G +P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366
Query: 498 DEITVRILSSCLLKSGMPGEAARI 521
+ IT L K EA ++
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQM 390
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D+A M P ++ +N L + + K+ + L K++ K + ++ + +
Sbjct: 70 DDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG-IAHSIYTLSI 128
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+ +C+ K+ A S ++ + G +P+ FN+L++G + AL + +M+ G
Sbjct: 129 MINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMG 188
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P ++T +L+ G C GKV+ + L M + T+ +++ +CKS + A
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGH 474
+LLR+++ +I Y+ +IDG CK G++D A + EME K K D T+ LI G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGF 308
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
C GR D + M+ SP+ +T +L +K G EA ++ + + +
Sbjct: 309 CNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
S FS SY +S K +A LF +M +S P FN L K +
Sbjct: 47 STFSDRNLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYEL 106
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
L + K+M G + T + +I +CR K++Y ++ F+ L++
Sbjct: 107 VLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLN 166
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKP 462
LC R+ EA +L+ ++ P N +++G C +G V +A ++ M E +P
Sbjct: 167 GLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQP 226
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
++ T+ ++ C G+ A+ + KM D + I+ L K G
Sbjct: 227 NEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDG 277
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 211 bits (538), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 129/408 (31%), Positives = 212/408 (51%), Gaps = 13/408 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N ++ LC+ + A + + M G PD G+L++ + R+D +K+L
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGD 234
++ V+++ L+ V H +LDDA + +++ S+ + + T+N L+ G G
Sbjct: 349 PKPEI----VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV---GLKSKFSPNVR 291
V A + L+ MR+ GC P++ +Y L+ G C++ ++D A ++L E+ GLK PN
Sbjct: 405 VGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLK----PNTV 460
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+ +IS +CK ++ EA +F EM R G KP+ +TFNSLI G +V + AL + + M
Sbjct: 461 GFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDM 520
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+ G + VT+ +LI + R G++ L +EM + T++ LI LC++ +
Sbjct: 521 ISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEV 580
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+AR L ++ R P N +I+G C+SG V+EA EM + PD TF L
Sbjct: 581 DKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 640
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
I G C GR D + +F K+ A G PD +T L S L K G +A
Sbjct: 641 INGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDA 688
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 220/455 (48%), Gaps = 36/455 (7%)
Query: 105 REKLNVHHSFWTYNMLLRSLCQKGLHS-SAKLLYDCMRFDGKLPDSRL-LGFLVSSFALV 162
R + +F +YN++L L H +A + YD + K+P + G ++ +F V
Sbjct: 173 RNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML--SRKIPPTLFTFGVVMKAFCAV 230
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+ +D + LL + + N+V+Y L+ L K N++++A+ L E+ + TF
Sbjct: 231 NEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETF 290
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTY------------------------- 257
N ++ GLC ++EA K +N M G +PD +TY
Sbjct: 291 NDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK 350
Query: 258 ------NTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
NTL+HG +D A+ +L ++ P+V +Y ++I GY K + A
Sbjct: 351 PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALE 410
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+ +M G KPN +++ L+DGF K+G +D A + +M G P+ V F LI +C
Sbjct: 411 VLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFC 470
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ ++ ++++ EM + ++TF+ LIS LC+ + ++ A LLR + +V
Sbjct: 471 KEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTV 530
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEEKCKP-DKFTFTILIAGHCMKGRAPDAIVIFYKM 490
YN +I+ + + G + EA +V EM + P D+ T+ LI G C G A +F KM
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKM 590
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
L G +P I+ IL + L +SGM EA ++ +
Sbjct: 591 LRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 127/482 (26%), Positives = 224/482 (46%), Gaps = 45/482 (9%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYD 138
+TP + ++++ N + F +T + HSF Y +L+ L G + L
Sbjct: 76 ITPFQLYKLLELPLNVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLI 135
Query: 139 CMRFDGKLPDSRLL----------GFLVSSFALVDRL-------------DVSKELLAEA 175
M+ +G + L GF + L+ + +V E+L
Sbjct: 136 QMKDEGIVFKESLFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSG 195
Query: 176 QCNKVQVNAVVYDNL----------LSVLVKH----NKLDDAICLFRELMRSHSHLETST 221
C+KV N V YD L V++K N++D A+ L R++ + +
Sbjct: 196 NCHKVAAN-VFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVI 254
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
+ L+ L V+EA + L M GC PD T+N ++ GLC+ ++ A ++ +
Sbjct: 255 YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRML 314
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
++ F+P+ +Y +++G CK+ ++ A LF + KP FN+LI GFV G +
Sbjct: 315 IRG-FAPDDITYGYLMNGLCKIGRVDAAKDLFYRI----PKPEIVIFNTLIHGFVTHGRL 369
Query: 342 DSALGIYKKMLF-HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
D A + M+ +G PDV T+ SLI GY + G V L++ H+M + +++++++
Sbjct: 370 DDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI 429
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK- 459
L+ CK ++ EA ++L ++ + P +N +I +CK + EA I EM K
Sbjct: 430 LVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKG 489
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
CKPD +TF LI+G C A+ + M++ G + +T L + L+ G EA
Sbjct: 490 CKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEAR 549
Query: 520 RI 521
++
Sbjct: 550 KL 551
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/316 (32%), Positives = 171/316 (54%), Gaps = 5/316 (1%)
Query: 116 TYNMLLRSLCQKGLHSSA-KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
TYN L+ ++GL A ++L+D MR G P+ LV F + ++D + +L E
Sbjct: 391 TYNSLIYGYWKEGLVGLALEVLHD-MRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNE 449
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ ++ N V ++ L+S K +++ +A+ +FRE+ R + TFN L+ GLC +
Sbjct: 450 MSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDE 509
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP-NVRSY 293
+ A L M S G + VTYNTL++ R E+ AR L+ E+ + SP + +Y
Sbjct: 510 IKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQG--SPLDEITY 567
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
++I G C+ ++ +A SLF++M R G P+ + N LI+G + G ++ A+ K+M+
Sbjct: 568 NSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVL 627
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
G PD+VTF SLI G CR G++ GL ++ ++ I TF+ L+S+LCK + +
Sbjct: 628 RGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYD 687
Query: 414 ARDLLRQLKRTDIVPQ 429
A LL + VP
Sbjct: 688 ACLLLDEGIEDGFVPN 703
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 145/332 (43%), Gaps = 27/332 (8%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA------R 274
+ VL+G L + G+ + L M+ G IV +L + R + D+A
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEG----IVFKESLFISIMR--DYDKAGFPGQTT 166
Query: 275 DLLKEVGLKSKFSPNVRSYTTV----ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
L+ E+ P +SY V +SG C K A+++F +M P FTF
Sbjct: 167 RLMLEMRNVYSCEPTFKSYNVVLEILVSGNCH----KVAANVFYDMLSRKIPPTLFTFGV 222
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
++ F V +DSAL + + M HGC P+ V + +LI + +VN L L EM
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
TF+ +I LCK +R+ EA ++ ++ P Y ++++G CK G VD A
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342
Query: 451 AIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT-GCSPDEITVRILSSCL 509
+ + KP+ F LI G GR DA + M+ + G PD T L
Sbjct: 343 DLFYRIP---KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGY 399
Query: 510 LKSGMPGEAARIKESLHENQGDSLKKSYYEGT 541
K G+ G A E LH+ + K + Y T
Sbjct: 400 WKEGLVGLAL---EVLHDMRNKGCKPNVYSYT 428
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 117/228 (51%), Gaps = 1/228 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+N L+ LC+ A L M +G + ++ L+++F + +++L+ E
Sbjct: 495 YTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNE 554
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
++ + Y++L+ L + ++D A LF +++R + N+L+ GLC +G
Sbjct: 555 MVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGM 614
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
V+EA +F M G +PDIVT+N+L++GLCR ++ + +++ + P+ ++
Sbjct: 615 VEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEG-IPPDTVTFN 673
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
T++S CK + +A L DE G PN T++ L+ + +D
Sbjct: 674 TLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L++ LC+ G A+ L++ M DG P + L++ ++ + E E
Sbjct: 566 TYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEM 625
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V +++L++ L + +++D + +FR+L +T TFN LM LC G V
Sbjct: 626 VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFV 685
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+A L+ G P+ T++ LL + + +DR R
Sbjct: 686 YDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDRRR 724
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 209 bits (532), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 125/459 (27%), Positives = 224/459 (48%), Gaps = 37/459 (8%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + H+ +TY++L+ C++ A + M G P+ L L++ + R+
Sbjct: 108 QNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRI 167
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + Q N V ++ L+ L HNK +A+ L ++ + T+ V+
Sbjct: 168 SEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV 227
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC GD D AF LN M P ++ YNT++ GLC+ K +D A +L KE+ K
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG- 286
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PNV +Y+++IS C + +AS L +M P+ FTF++LID FVK G + A
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346
Query: 346 GIYKKM--------------LFHG---------------------CPPDVVTFTSLIEGY 370
+Y +M L +G C PDVVT+ +LI+G+
Sbjct: 347 KLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGF 406
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
C+ +V G++++ EM+ R + + T+++LI L ++ A+++ +++ + P
Sbjct: 407 CKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNI 466
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYK 489
YN ++DG CK+G +++A + ++ K +P +T+ I+I G C G+ D +F
Sbjct: 467 MTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCN 526
Query: 490 MLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+ G PD + + S + G EA + + + E+
Sbjct: 527 LSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 206/396 (52%), Gaps = 4/396 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL-PDSRLLGFLVSSFALVDRLDVSKELLAE 174
TY +++ LC++G A L + M GKL P + ++ +D + L E
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKME-QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKE 281
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ ++ N V Y +L+S L + + DA L +++ + + TF+ L+ G
Sbjct: 282 METKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGK 341
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ EA K + M P IVTY++L++G C +D A+ + + + K F P+V +Y
Sbjct: 342 LVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCF-PDVVTYN 400
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+I G+CK +++E +F EM + G N T+N LI G + G+ D A I+K+M+
Sbjct: 401 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD 460
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G PP+++T+ +L++G C+ GK+ + ++ + + +++T++++I +CK+ ++++
Sbjct: 461 GVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDG 520
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAG 473
DL L + P YN +I G+C+ G+ +EA+A+ EM+E P+ + LI
Sbjct: 521 WDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA 580
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
G + + +M + G + D T+ ++++ L
Sbjct: 581 RLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 616
Score = 171 bits (433), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 106/360 (29%), Positives = 180/360 (50%), Gaps = 2/360 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+S+ A +++ DV L + Q + N Y L++ + ++L A+ + ++M+
Sbjct: 87 LLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLG 146
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
T + L+ G C + + EA ++ M G P+ VT+NTL+HGL + A
Sbjct: 147 YEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAM 206
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L+ + K P++ +Y V++G CK A +L ++M++ +P +N++IDG
Sbjct: 207 ALIDRMVAKG-CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
K +MD AL ++K+M G P+VVT++SLI C G+ + L +M R I+
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ TFS LI K +L EA L ++ + I P Y+ +I+G+C +DEA +
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
M K C PD T+ LI G C R + + +F +M G + +T IL L ++G
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445
Score = 158 bits (400), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 172/346 (49%), Gaps = 8/346 (2%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR---SHSHLETS 220
+LD + L E ++ + + + LLS + K NK D I L ++ H+H
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY--- 117
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
T+++L+ C + A L M G P+IVT ++LL+G C K + A L+ ++
Sbjct: 118 TYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQM 177
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+ + PN ++ T+I G +K EA +L D M G +P+ T+ +++G K G+
Sbjct: 178 -FVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGD 236
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
D A + KM P V+ + ++I+G C+ ++ L+L+ EM T+ I ++ T+S
Sbjct: 237 TDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSS 296
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC 460
LIS LC R +A LL + I P ++ +ID + K G + EA + EM ++
Sbjct: 297 LISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRS 356
Query: 461 -KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
P T++ LI G CM R +A +F M++ C PD +T L
Sbjct: 357 IDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 402
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 123/256 (48%), Gaps = 1/256 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ S TY+ L+ C AK +++ M PD L+ F R++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVE 413
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
E+ E + N V Y+ L+ L + D A +F+E++ T+N L+
Sbjct: 414 EGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G +++A ++ P I TYN ++ G+C+ +V+ DL + LK
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG-V 532
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
P+V +Y T+ISG+C+ +EA +LF EM GT PN+ +N+LI ++ G+ +++
Sbjct: 533 KPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 347 IYKKMLFHGCPPDVVT 362
+ K+M G D T
Sbjct: 593 LIKEMRSCGFAGDAST 608
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 136/269 (50%), Gaps = 3/269 (1%)
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
+GL +K +D A L E+ +KS+ P++ ++ ++S K++K SL ++M G
Sbjct: 55 NGLSELK-LDDAVALFGEM-VKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGI 112
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
N +T++ LI+ F + + AL + KM+ G P++VT +SL+ GYC +++ +
Sbjct: 113 PHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVA 172
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L +M + TF+ LI L N+ EA L+ ++ P Y V++G C
Sbjct: 173 LVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLC 232
Query: 442 KSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
K G+ D A ++ +ME+ K +P + +I G C DA+ +F +M G P+ +
Sbjct: 233 KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQ 529
T L SCL G +A+R+ + E +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERK 321
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 208 bits (529), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 217/414 (52%), Gaps = 2/414 (0%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
+ T N L+ LC G S A LL D M G P+ G ++ + ++ ELL
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ + K++++AV Y ++ L K LD+A LF E+ + + L+ G C A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G D+ K L M +PD+V ++ L+ + ++ A +L KE+ ++ SP+ +
Sbjct: 296 GRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM-IQRGISPDTVT 354
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
YT++I G+CK +++ +A+ + D M G PN TFN LI+G+ K +D L +++KM
Sbjct: 355 YTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMS 414
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G D VT+ +LI+G+C +GK+ +L+ EM +R + + ++ +L+ LC + +
Sbjct: 415 LRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE 474
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+A ++ +++++ + IYN +I G C + VD+A + + K KPD T+ I+I
Sbjct: 475 KALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMI 534
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
G C KG +A ++F KM G SP+ T IL L G ++A++ E +
Sbjct: 535 GGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI 588
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/362 (29%), Positives = 182/362 (50%), Gaps = 4/362 (1%)
Query: 147 PDSRLLGF--LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAI 204
P RL+ F L S A + D+ +L + + + N +++ + KL A
Sbjct: 68 PRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAF 127
Query: 205 CLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGL 264
++++ +T TF+ L+ GLC G V EA + ++ M G P ++T N L++GL
Sbjct: 128 SAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGL 187
Query: 265 CRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN 324
C +V A L+ + +++ F PN +Y V+ CK + A L +M+ K +
Sbjct: 188 CLNGKVSDAVLLIDRM-VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLD 246
Query: 325 AFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH 384
A ++ +IDG K G++D+A ++ +M G D++ +T+LI G+C G+ + G L
Sbjct: 247 AVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLR 306
Query: 385 EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
+M R I+ + FS LI K +L+EA +L +++ + I P Y +IDG+CK
Sbjct: 307 DMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKEN 366
Query: 445 NVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
+D+AN ++ M K C P+ TF ILI G+C D + +F KM G D +T
Sbjct: 367 QLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYN 426
Query: 504 IL 505
L
Sbjct: 427 TL 428
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 200/427 (46%), Gaps = 15/427 (3%)
Query: 31 FTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKR 90
TL L C G ++ ++V T F + VL K +L +E++++
Sbjct: 178 ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRK 237
Query: 91 LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSR 150
+ E+ + Y++++ LC+ G +A L++ M G D
Sbjct: 238 M--------------EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADII 283
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
+ L+ F R D +LL + K+ + V + L+ VK KL +A L +E+
Sbjct: 284 IYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEM 343
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
++ +T T+ L+ G C +D+A L+ M S GC P+I T+N L++G C+ +
Sbjct: 344 IQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLI 403
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D +L +++ L+ + V +Y T+I G+C+L K++ A LF EM +P+ ++
Sbjct: 404 DDGLELFRKMSLRGVVADTV-TYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
L+DG G + AL I++K+ D+ + +I G C KV+ DL+ + +
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
+ + T++++I LCK L EA L R+++ P YN +I + G+ ++
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582
Query: 451 AIVVEME 457
++ E++
Sbjct: 583 KLIEEIK 589
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 148/304 (48%), Gaps = 2/304 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
K DDA+ LF+E+ RS F+ L + D M G + ++ T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+++ CR +++ A + ++ +K + P+ +++T+I+G C ++ EA L D M
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKI-IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVE 170
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KP T N+L++G G + A+ + +M+ G P+ VT+ +++ C+ G+
Sbjct: 171 MGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
++L +M R I +S++I LCK L A +L +++ IY +I
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290
Query: 439 GYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G+C +G D+ ++ +M + K PD F+ LI +G+ +A + +M+ G SP
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 498 DEIT 501
D +T
Sbjct: 351 DTVT 354
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 142/308 (46%), Gaps = 2/308 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K + ++ L+ ++G A+ L+ M G PD+ L+ F ++LD
Sbjct: 310 KRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLD 369
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ +L N ++ L++ K N +DD + LFR++ +T T+N L+
Sbjct: 370 KANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLI 429
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
G C G ++ A + M S PDIV+Y LL GLC E ++A ++ +++ KSK
Sbjct: 430 QGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIE-KSKM 488
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
++ Y +I G C SK+ +A LF + G KP+ T+N +I G K G++ A
Sbjct: 489 ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADL 548
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+++KM G P+ T+ LI + G L E+ S T +++ L
Sbjct: 549 LFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML- 607
Query: 407 KSNRLQEA 414
RL+++
Sbjct: 608 SDGRLKKS 615
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 1/189 (0%)
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
D A+ ++++M P ++ F+ L R + + LDL +M + I+ +L+T S++
Sbjct: 54 DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC- 460
I+ C+ +L A + ++ + P ++ +I+G C G V EA +V M E
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR 520
KP T L+ G C+ G+ DA+++ +M+ TG P+E+T + + KSG A
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233
Query: 521 IKESLHENQ 529
+ + E +
Sbjct: 234 LLRKMEERK 242
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 207 bits (527), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 113/391 (28%), Positives = 212/391 (54%), Gaps = 2/391 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T + L+ LC KG S A +L D M G PD G +++ ++ +L +
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ + V Y ++ L K DDA+ LF E+ + T++ L+GGLC+ G
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D+ K L M PD+VT++ L+ + ++ A++L E+ + +P+ +Y +
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM-ITRGIAPDTITYNS 355
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+CK + + EA+ +FD M G +P+ T++ LI+ + K +D + +++++ G
Sbjct: 356 LIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKG 415
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P+ +T+ +L+ G+C+ GK+N +L+ EM +R + S+ T+ +L+ LC + L +A
Sbjct: 416 LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKAL 475
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
++ +++++ + IYN +I G C + VD+A ++ + +K KPD T+ ++I G
Sbjct: 476 EIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGL 535
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
C KG +A ++F KM GC+PD+ T IL
Sbjct: 536 CKKGSLSEADMLFRKMKEDGCTPDDFTYNIL 566
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 207/474 (43%), Gaps = 49/474 (10%)
Query: 32 TLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRL 91
T++ L C KG +++ ++V F VL+ K +L L++ +++
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 92 NNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRL 151
E+ N+ S Y++++ SLC+ G A L++ M G D
Sbjct: 237 --------------EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
L+ + D ++L E + + V + L+ V VK KL +A L+ E++
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMI 342
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD 271
+T T+N L+ G C + EA + + M S GC PDIVTY+ L++ C+ K VD
Sbjct: 343 TRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVD 402
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
L +E+ K PN +Y T++ G+C+ K+ A LF EM G P+ T+ L
Sbjct: 403 DGMRLFREISSKG-LIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGIL 461
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+DG G ++ AL I++KM + + +I G C KV+ L+ ++ + +
Sbjct: 462 LDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGV 521
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
+ T++V+I LCK L EA L R++K
Sbjct: 522 KPDVVTYNVMIGGLCKKGSLSEADMLFRKMK----------------------------- 552
Query: 452 IVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
E+ C PD FT+ ILI H ++ + +M G S D T++++
Sbjct: 553 -----EDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMV 601
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/343 (31%), Positives = 171/343 (49%), Gaps = 7/343 (2%)
Query: 177 CNKVQVNAVVYDN-----LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
C +++N + +D +++ + KL A + + +T TF+ L+ G C
Sbjct: 93 CKGMELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL 152
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G V EA ++ M PD+VT +TL++GLC V A L+ + ++ F P+
Sbjct: 153 EGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM-VEYGFQPDEV 211
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y V++ CK A LF +M+ K + ++ +ID K G+ D AL ++ +M
Sbjct: 212 TYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEM 271
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
G DVVT++SLI G C GK + G + EM RNI + TFS LI K +L
Sbjct: 272 EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKL 331
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
EA++L ++ I P YN +IDG+CK + EAN + M K C+PD T++IL
Sbjct: 332 LEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSIL 391
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
I +C R D + +F ++ + G P+ IT L +SG
Sbjct: 392 INSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/391 (27%), Positives = 189/391 (48%), Gaps = 2/391 (0%)
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
M +G D + +++ + +L + +L A + + + + L++ +
Sbjct: 96 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
+ +A+ L ++ + T + L+ GLC G V EA ++ M +G PD VTY
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
+L+ LC+ A DL +++ + +V Y+ VI CK +A SLF+EM+
Sbjct: 216 VLNRLCKSGNSALALDLFRKME-ERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMK 274
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G K + T++SLI G G D + ++M+ PDVVTF++LI+ + + GK+
Sbjct: 275 GIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEA 334
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+L++EM TR I+ T++ LI CK N L EA + + P Y+ +I+
Sbjct: 335 KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINS 394
Query: 440 YCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
YCK+ VD+ + E+ K P+ T+ L+ G C G+ A +F +M++ G P
Sbjct: 395 YCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPS 454
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+T IL L +G +A I E + +++
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSR 485
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 38/298 (12%)
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L +G+ IK V+ A DL + + ++S+ P + + S + + M+ +
Sbjct: 42 LRNGIVDIK-VNDAIDLFESM-IQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G + + +T +I+ + + + A + + G PD +TF++L+ G+C G+V+
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE-------------------------- 413
+ L M L T S LI+ LC R+ E
Sbjct: 160 VALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNR 219
Query: 414 ---------ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
A DL R+++ +I Y+ VID CK G+ D+A ++ EME K K D
Sbjct: 220 LCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKAD 279
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
T++ LI G C G+ D + +M+ PD +T L +K G EA +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKEL 337
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 206 bits (525), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 126/448 (28%), Positives = 216/448 (48%), Gaps = 35/448 (7%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E L V H+ +TYN+++ LC++ S A + M G P L L++ F +R+
Sbjct: 92 EILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 151
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + Q + V + L+ L +HNK +A+ L ++ + T+ +
Sbjct: 152 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 211
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---- 281
+ GLC G+ D A LN M D+V Y+T++ LC+ + VD A +L E+
Sbjct: 212 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGI 271
Query: 282 ------------------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
L+ K +PNV ++ ++I + K K+ EA
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
LFDEM + PN T+NSLI+GF +D A I+ M+ C PDVVT+ +LI G+C
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ KV G++L+ +M+ R + + T++ LI +++ A+ + +Q+ + P
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
YN ++DG CK+G +++A + +++ K +PD +T+ I+ G C G+ D +F +
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSL 511
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEA 518
G PD I + S K G+ EA
Sbjct: 512 SLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Score = 172 bits (435), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 194/395 (49%), Gaps = 2/395 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY ++ LC++G A L + M D + ++ S +D + L E
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
++ + Y +L+S L + + DA L +++ + TFN L+ G +
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKL 326
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA K + M P+IVTYN+L++G C +D A+ + + K P+V +Y T
Sbjct: 327 IEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL-PDVVTYNT 385
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+G+CK K+ + LF +M R G N T+ +LI GF + + D+A ++K+M+ G
Sbjct: 386 LINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDG 445
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P+++T+ +L++G C+ GK+ + ++ + + ++T++++ +CK+ ++++
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGW 505
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGH 474
DL L + P YN +I G+CK G +EA + ++M+E PD T+ LI H
Sbjct: 506 DLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAH 565
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
G + + +M + + D T +++ L
Sbjct: 566 LRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML 600
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/394 (30%), Positives = 188/394 (47%), Gaps = 20/394 (5%)
Query: 123 SLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQV 182
S C +G++ S L YD R KL + LL +LD + +L E ++
Sbjct: 16 SFCLRGIYFSG-LSYDGYR--EKLSRNALLHL---------KLDEAVDLFGEMVKSRPFP 63
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
+ V + LLS + K K D I ++ T+N+++ LC + A L
Sbjct: 64 SIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAIL 123
Query: 243 NGMRSFGCSPDIVTYNTLLHGLC---RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
M G P IVT N+LL+G C RI E D + E+G + P+ ++TT++ G
Sbjct: 124 GKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG----YQPDTVTFTTLVHG 179
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+ +K EA +L + M G +P+ T+ ++I+G K G D AL + KM D
Sbjct: 180 LFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEAD 239
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VV ++++I+ C+ V+ L+L+ EM+ + I + T+S LIS LC R +A LL
Sbjct: 240 VVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKG 478
+ I P +N +ID + K G + EA + EM + P+ T+ LI G CM
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
R +A IF M++ C PD +T L + K+
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 192/411 (46%), Gaps = 37/411 (9%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+S+ A + + D+ + + V N Y+ +++ L + ++L A+ + ++M+
Sbjct: 71 LLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLG 130
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH------------ 262
T N L+ G C + EA ++ M G PD VT+ TL+H
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 263 -----------------------GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
GLC+ E D A +LL ++ K K +V Y+TVI
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKME-KGKIEADVVIYSTVIDS 249
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
CK + +A +LF EMD G +P+ FT++SLI G A + ML P+
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VVTF SLI+ + + GK+ L+ EM R+I ++ T++ LI+ C +RL EA+ +
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKG 478
+ D +P YN +I+G+CK+ V + + +M + + T+T LI G
Sbjct: 370 LMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+A ++F +M++ G P+ +T L L K+G +A + E L +++
Sbjct: 430 DCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSK 480
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 8/301 (2%)
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF---SPNVR 291
+DEA M P IV ++ LL + ++K+ D L+ G K + S N+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFD----LVISFGEKMEILGVSHNLY 101
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y +I+ C+ S++ A ++ +M + G P+ T NSL++GF + A+ + +M
Sbjct: 102 TYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 161
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+ G PD VTFT+L+ G + K + + L M + L T+ +I+ LCK
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 221
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
A +LL ++++ I IY+ VID CK +VD+A + EM+ K +PD FT++ L
Sbjct: 222 DLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSL 281
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQG 530
I+ C GR DA + ML +P+ +T L K G EA ++ + + +
Sbjct: 282 ISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSI 341
Query: 531 D 531
D
Sbjct: 342 D 342
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 36/187 (19%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
VH + TYN LL LC+ G A ++++ ++ PD +
Sbjct: 446 VHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDI-----------------YTY 488
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
+++E C K K++D LF L + +N ++ G
Sbjct: 489 NIMSEGMC------------------KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGF 530
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C G +EA+ M+ G PD TYNTL+ R + + +L+KE+ +F+ +
Sbjct: 531 CKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM-RSCRFAGD 589
Query: 290 VRSYTTV 296
+Y V
Sbjct: 590 ASTYGLV 596
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 206 bits (524), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 129/404 (31%), Positives = 204/404 (50%), Gaps = 6/404 (1%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+N L+ LC+ G A + D M +G PD ++S + + + E+L +
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
N V Y+ L+S L K N++++A L R L + TFN L+ GLC +
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
A + MRS GC PD TYN L+ LC ++D A ++LK++ L S + +V +Y
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL-SGCARSVITYN 474
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+I G+CK +K +EA +FDEM+ G N+ T+N+LIDG K ++ A + +M+
Sbjct: 475 TLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIME 534
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G PD T+ SL+ +CR G + D+ M + + T+ LIS LCK+ R++ A
Sbjct: 535 GQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVA 594
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKPDKFTFTILIA 472
LLR ++ I P YN VI G + EA + EM E+ PD ++ I+
Sbjct: 595 SKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFR 654
Query: 473 GHCMKGRAP--DAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
G C G P +A+ ++L G P+ ++ +L+ LL M
Sbjct: 655 GLC-NGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSM 697
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 120/406 (29%), Positives = 203/406 (50%), Gaps = 48/406 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS---KELL 172
T+N+L+++LC+ A L+ + M G +PD + ++ + LD + +E +
Sbjct: 191 TFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQM 250
Query: 173 AEAQCN--KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGL 229
E C+ V VN +V+ K +++DA+ +E+ + TFN L+ GL
Sbjct: 251 VEFGCSWSNVSVNVIVHG-----FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGL 305
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C AG V A + ++ M G PD+ TYN+++ GLC++ EV A ++L ++ + SPN
Sbjct: 306 CKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQM-ITRDCSPN 364
Query: 290 VRSYTTVISGYCKLSKMKEASSL-----------------------------------FD 314
+Y T+IS CK ++++EA+ L F+
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
EM G +P+ FT+N LID G +D AL + K+M GC V+T+ +LI+G+C+
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
K +++ EM +S + T++ LI LCKS R+++A L+ Q+ P YN
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGR 479
++ +C+ G++ +A IV M C+PD T+ LI+G C GR
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 207/454 (45%), Gaps = 45/454 (9%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFD-GKLPDS----RLLGFLVSSFALVDRLDVSKE 170
T+ +L+ S Q L + D M + G PD+ R+L LV +L +++S
Sbjct: 120 TFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL-KLVEISH- 177
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
A+ ++ + ++ L+ L + ++L AI + ++ + TF +M G
Sbjct: 178 --AKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYI 235
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE----------- 279
GD+D A + M FGCS V+ N ++HG C+ V+ A + ++E
Sbjct: 236 EEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQ 295
Query: 280 ------------------------VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
V L+ + P+V +Y +VISG CKL ++KEA + D+
Sbjct: 296 YTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQ 355
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
M PN T+N+LI K ++ A + + + G PDV TF SLI+G C
Sbjct: 356 MITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRN 415
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
++L+ EM ++ T+++LI LC +L EA ++L+Q++ + YN
Sbjct: 416 HRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNT 475
Query: 436 VIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+IDG+CK+ EA I EME + T+ LI G C R DA + +M+ G
Sbjct: 476 LIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEG 535
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
PD+ T L + + G +AA I +++ N
Sbjct: 536 QKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSN 569
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 188/415 (45%), Gaps = 74/415 (17%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF----- 239
+Y+ +L L + DD + ++ S + TSTF +L+ DE
Sbjct: 84 ALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDW 143
Query: 240 ---------------KFLN----------------GMRSFGCSPDIVTYNTLLHGLCRIK 268
+ LN M +G PD+ T+N L+ LCR
Sbjct: 144 MIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAH 203
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGY---------------------------- 300
++ A +L+++ P+ +++TTV+ GY
Sbjct: 204 QLRPAILMLEDMP-SYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSV 262
Query: 301 -------CKLSKMKEASSLFDEM-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
CK ++++A + EM ++ G P+ +TFN+L++G K G++ A+ I ML
Sbjct: 263 NVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVML 322
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G PDV T+ S+I G C++G+V +++ +M TR+ S + T++ LIS LCK N+++
Sbjct: 323 QEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVE 382
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
EA +L R L I+P +N +I G C + N A + EM K C+PD+FT+ +LI
Sbjct: 383 EATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLI 442
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
C KG+ +A+ + +M +GC+ IT L K+ EA I + +
Sbjct: 443 DSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEME 497
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/314 (25%), Positives = 148/314 (47%), Gaps = 10/314 (3%)
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARD-- 275
E + + ++ L +G D+ K L M+S C T+ L+ + + D
Sbjct: 82 EPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSVV 141
Query: 276 --LLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
++ E GLK P+ Y +++ + +K +M G KP+ TFN LI
Sbjct: 142 DWMIDEFGLK----PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIK 197
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
+ + A+ + + M +G PD TFT++++GY G ++ L + +M S
Sbjct: 198 ALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSW 257
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTD-IVPQPSIYNHVIDGYCKSGNVDEANAI 452
S + +V++ CK R+++A + ++++ D P +N +++G CK+G+V A I
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 453 V-VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLK 511
+ V ++E PD +T+ +I+G C G +A+ + +M+ CSP+ +T L S L K
Sbjct: 318 MDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCK 377
Query: 512 SGMPGEAARIKESL 525
EA + L
Sbjct: 378 ENQVEEATELARVL 391
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 117/457 (25%), Positives = 223/457 (48%), Gaps = 35/457 (7%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + H+ +TY++L+ C++ S A + M G PD L L++ F +R+
Sbjct: 108 QNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRI 167
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + Q ++ ++ L+ L +HN+ +A+ L ++ + T+ ++
Sbjct: 168 SDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIV 227
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---- 281
+ GLC GD+D A L M P +V YNT++ LC K V+ A +L E+
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 282 ------------------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
++ K +PNV +++ +I + K K+ EA
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
L+DEM + P+ FT++SLI+GF +D A +++ M+ C P+VVT+ +LI+G+C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ +V+ G++L+ EM+ R + + T++ LI ++ A+ + +Q+ ++P
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
Y+ ++DG C +G V+ A + ++ K +PD +T+ I+I G C G+ D +F +
Sbjct: 468 TYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSL 527
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
G P+ +T + S + G+ EA + + E
Sbjct: 528 SLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKE 564
Score = 187 bits (476), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/376 (30%), Positives = 191/376 (50%), Gaps = 2/376 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L++ F +L ++ +LA+ + + V ++LL+ N++ DA+ L +++
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
++ TFN L+ GL EA ++ M GC PD+VTY +++GLC+ ++D A
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
LLK++ + K P V Y T+I C + +A +LF EMD G +PN T+NSLI
Sbjct: 242 SLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
G A + M+ P+VVTF++LI+ + + GK+ L+ EM R+I
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ T+S LI+ C +RL EA+ + + D P YN +I G+CK+ VDE +
Sbjct: 361 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFR 420
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
EM ++ + T+T LI G +A ++F +M++ G PD +T IL L +G
Sbjct: 421 EMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNG 480
Query: 514 MPGEAARIKESLHENQ 529
A + E L ++
Sbjct: 481 KVETALVVFEYLQRSK 496
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 204/431 (47%), Gaps = 37/431 (8%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+N L+ L + S A L D M G PD G +V+ +D++ LL +
Sbjct: 187 FTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKK 246
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS--- 231
+ K++ V+Y+ ++ L + ++DA+ LF E+ T+N L+ LC+
Sbjct: 247 MEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGR 306
Query: 232 --------------------------------AGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
G + EA K + M PDI TY++
Sbjct: 307 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 366
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L++G C +D A+ + + + K F PNV +Y T+I G+CK ++ E LF EM +
Sbjct: 367 LINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G N T+ +LI GF + D+A ++K+M+ G PD++T++ L++G C GKV
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
L ++ + + ++T++++I +CK+ ++++ DL L + P Y ++ G
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545
Query: 440 YCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+C+ G +EA+A+ EM EE PD T+ LI H G + + +M + D
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 605
Query: 499 EITVRILSSCL 509
T+ ++++ L
Sbjct: 606 ASTIGLVTNML 616
Score = 161 bits (408), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 177/364 (48%), Gaps = 8/364 (2%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
+LD + L + ++ + V + LLS + K NK D I L ++ T++
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+L+ C + A L M G PDIVT N+LL+G C + A L+ ++ ++
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQM-VE 179
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ P+ ++ T+I G + ++ EA +L D M G +P+ T+ +++G K G++D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
AL + KKM P VV + ++I+ C VN L+L+ EM+ + I ++ T++ LI
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKP 462
LC R +A LL + I P ++ +ID + K G + EA + EM + P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 359
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D FT++ LI G CM R +A +F M++ C P+ +T L K A R+
Sbjct: 360 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK------AKRVD 413
Query: 523 ESLH 526
E +
Sbjct: 414 EGME 417
Score = 159 bits (401), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 171/352 (48%), Gaps = 2/352 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+S+ A +++ D+ L + Q + N Y L++ + ++L A+ + ++M+
Sbjct: 87 LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLG 146
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ T N L+ G C + +A + M G PD T+NTL+HGL R A
Sbjct: 147 YEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAV 206
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L+ + +K P++ +Y V++G CK + A SL +M++ +P +N++ID
Sbjct: 207 ALVDRMVVKG-CQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDA 265
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
N++ AL ++ +M G P+VVT+ SLI C G+ + L +M R I+ +
Sbjct: 266 LCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPN 325
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ TFS LI K +L EA L ++ + I P Y+ +I+G+C +DEA +
Sbjct: 326 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 385
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
M K C P+ T+ LI G C R + + +F +M G + +T L
Sbjct: 386 LMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTL 437
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 123/245 (50%), Gaps = 1/245 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ +TY+ L+ C AK +++ M P+ L+ F R+D
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
EL E + N V Y L+ + + D+A +F++++ + T+++L+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILL 473
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC+ G V+ A ++ PDI TYN ++ G+C+ +V+ DL + LK
Sbjct: 474 DGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-V 532
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
PNV +YTT++SG+C+ +EA +LF EM G P++ T+N+LI ++ G+ ++
Sbjct: 533 KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAE 592
Query: 347 IYKKM 351
+ ++M
Sbjct: 593 LIREM 597
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 132/262 (50%), Gaps = 2/262 (0%)
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
++D A +L ++ +KS+ P++ ++ ++S K++K SL ++M G N +T+
Sbjct: 61 KLDDAVNLFGDM-VKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTY 119
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
+ LI+ F + + AL + KM+ G PD+VT SL+ G+C +++ + L +M
Sbjct: 120 SILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVE 179
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
TF+ LI L + NR EA L+ ++ P Y V++G CK G++D
Sbjct: 180 MGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDL 239
Query: 449 ANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
A +++ +ME+ K +P + +I C DA+ +F +M G P+ +T L
Sbjct: 240 ALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 299
Query: 508 CLLKSGMPGEAARIKESLHENQ 529
CL G +A+R+ + E +
Sbjct: 300 CLCNYGRWSDASRLLSDMIERK 321
>AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:5434142-5436244 FORWARD
LENGTH=642
Length = 642
Score = 203 bits (517), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 137/456 (30%), Positives = 228/456 (50%), Gaps = 10/456 (2%)
Query: 79 LTPSLVLEVVKRLNNPILGFK----FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAK 134
++P+++ E+VK L + K F+Q K S TYN ++ L Q+G H
Sbjct: 160 VSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSS--TYNSVILMLMQEGQHEKVH 217
Query: 135 LLYDCMRFDGK-LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
+Y M +G PD+ L+SS+ + R D + L E + N +Q +Y LL +
Sbjct: 218 EVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGI 277
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
K K++ A+ LF E+ R+ T+ L+ GL AG VDEA+ F M G +PD
Sbjct: 278 YFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPD 337
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG-YCKLSKMKEASSL 312
+V N L++ L ++ V+ ++ E+G+ + +P V SY TVI + + + E SS
Sbjct: 338 VVFLNNLMNILGKVGRVEELTNVFSEMGM-WRCTPTVVSYNTVIKALFESKAHVSEVSSW 396
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
FD+M P+ FT++ LIDG+ K ++ AL + ++M G PP + SLI +
Sbjct: 397 FDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGK 456
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
+ +L+ E+ + S ++V+I + K +L EA DL ++K P
Sbjct: 457 AKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYA 516
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
YN ++ G K+G ++EAN+++ +MEE C+ D + I++ G G AI +F +
Sbjct: 517 YNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIK 576
Query: 492 ATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+G PD +T L C +GM EAAR+ + +
Sbjct: 577 HSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKD 612
Score = 143 bits (360), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 122/485 (25%), Positives = 207/485 (42%), Gaps = 80/485 (16%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
+LE+ +N I +FF++ ++ N H TY L+R L
Sbjct: 99 ILEIDVEINVKI---QFFKWAGKRRNFQHDCSTYMTLIRCL------------------- 136
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
++RL G + + V R V V+ V L+ L + + A
Sbjct: 137 ---EEARLYGEMYRTIQEVVR------------NTYVSVSPAVLSELVKALGRAKMVSKA 181
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG-CSPDIVTYNTLLH 262
+ +F + +ST+N ++ L G ++ + M + G C PD +TY+ L+
Sbjct: 182 LSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALIS 241
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
++ D A L E+ + P + YTT++ Y K+ K+++A LF+EM R+G
Sbjct: 242 SYEKLGRNDSAIRLFDEMK-DNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS 300
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY---- 378
P +T+ LI G K G +D A G YK ML G PDVV +L+ +VG+V
Sbjct: 301 PTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNV 360
Query: 379 --GLDLWH------------------------------EMNTRNISASLHTFSVLISYLC 406
+ +W +M ++S S T+S+LI C
Sbjct: 361 FSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYC 420
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKF 465
K+NR+++A LL ++ P P+ Y +I+ K+ + AN + E++E
Sbjct: 421 KTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSR 480
Query: 466 TFTILIA--GHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
+ ++I G C G+ +A+ +F +M G PD L S ++K+GM EA +
Sbjct: 481 VYAVMIKHFGKC--GKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLR 538
Query: 524 SLHEN 528
+ EN
Sbjct: 539 KMEEN 543
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 9/338 (2%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
+ +TY L++ L + G A Y M DG PD L L++ V R++ +
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS-TFNVLMGGLCS 231
+E + V Y+ ++ L + + + + M++ S + T+++L+ G C
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK 421
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV- 290
V++A L M G P Y +L++ L + K + A +L KE LK F NV
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKE--LKENFG-NVS 478
Query: 291 -RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
R Y +I + K K+ EA LF+EM G+ P+ + +N+L+ G VK G ++ A + +
Sbjct: 479 SRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLR 538
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
KM +GC D+ + ++ G+ R G ++++ + I T++ L+ +
Sbjct: 539 KMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAG 598
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
+EA ++R++K Y+ ++D GNVD
Sbjct: 599 MFEEAARMMREMKDKGFEYDAITYSSILDAV---GNVD 633
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 162/333 (48%), Gaps = 3/333 (0%)
Query: 208 RELMR-SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR 266
+E++R ++ + + + L+ L A V +A + C P TYN+++ L +
Sbjct: 150 QEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQ 209
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
+ ++ ++ E+ + P+ +Y+ +IS Y KL + A LFDEM + +P
Sbjct: 210 EGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEK 269
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
+ +L+ + KVG ++ AL ++++M GC P V T+T LI+G + G+V+ + +M
Sbjct: 270 IYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDM 329
Query: 387 NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS-GN 445
++ + + L++ L K R++E ++ ++ P YN VI +S +
Sbjct: 330 LRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAH 389
Query: 446 VDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRI 504
V E ++ +M+ + P +FT++ILI G+C R A+++ +M G P
Sbjct: 390 VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCS 449
Query: 505 LSSCLLKSGMPGEAARIKESLHENQGDSLKKSY 537
L + L K+ A + + L EN G+ + Y
Sbjct: 450 LINALGKAKRYEAANELFKELKENFGNVSSRVY 482
>AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18097048-18099027 FORWARD
LENGTH=659
Length = 659
Score = 202 bits (515), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 209/410 (50%), Gaps = 9/410 (2%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TYN+LL++LC+ AK L M G PD+ ++SS V + +EL
Sbjct: 182 FTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGREL--- 238
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + VY+ L++ L K + A L RE++ +++ L+ LC++G
Sbjct: 239 --AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQ 296
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
++ AF FL M GC P+I T ++L+ G A DL ++ PNV +Y
Sbjct: 297 IELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYN 356
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T++ G+C + +A S+F M+ G PN T+ SLI+GF K G++D A+ I+ KML
Sbjct: 357 TLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTS 416
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
GC P+VV +T+++E CR K L M+ N + S+ TF+ I LC + RL A
Sbjct: 417 GCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWA 476
Query: 415 RDLLRQLKRTDIVPQPSI--YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+ RQ+++ P P+I YN ++DG K+ ++EA + E+ + + T+ L+
Sbjct: 477 EKVFRQMEQQHRCP-PNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLL 535
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
G C G A+ + KM+ G SPDEIT+ ++ K G AA++
Sbjct: 536 HGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 116/443 (26%), Positives = 193/443 (43%), Gaps = 44/443 (9%)
Query: 85 LEVVKRLNNP---ILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMR 141
L+VVKRL L FF+ H+ T+ +++R L G S + L M+
Sbjct: 44 LDVVKRLRQESCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMK 103
Query: 142 FDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLD 201
G L ++S + V + + E+ + + +Y+++L L+ N++
Sbjct: 104 LQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQ 163
Query: 202 DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
++R++ R T+NVL+ LC VD A K L M + GC PD V+Y T++
Sbjct: 164 MIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVI 223
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
+C + V R+L + +F P V Y +I+G CK K A L EM G
Sbjct: 224 SSMCEVGLVKEGRELAE------RFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGI 277
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
PN ++++LI+ G ++ A +ML GC P++ T +SL++G G LD
Sbjct: 278 SPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALD 337
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
LW++M ++ + P YN ++ G+C
Sbjct: 338 LWNQM----------------------------------IRGFGLQPNVVAYNTLVQGFC 363
Query: 442 KSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
GN+ +A ++ MEE C P+ T+ LI G +G A+ I+ KML +GC P+ +
Sbjct: 364 SHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVV 423
Query: 501 TVRILSSCLLKSGMPGEAARIKE 523
+ L + EA + E
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIE 446
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 98/386 (25%), Positives = 168/386 (43%), Gaps = 24/386 (6%)
Query: 101 FQFTREKLN--VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
F+ RE + + + +Y+ L+ LC G A M G P+ L LV
Sbjct: 266 FELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKG 325
Query: 159 FAL----VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L D LD+ +++ + +Q N V Y+ L+ H + A+ +F +
Sbjct: 326 CFLRGTTFDALDLWNQMI---RGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIG 382
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
T+ L+ G G +D A N M + GC P++V Y ++ LCR + A
Sbjct: 383 CSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEAE 442
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG-TKPNAFTFNSLID 333
L+ E+ K +P+V ++ I G C ++ A +F +M++ PN T+N L+D
Sbjct: 443 SLI-EIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
G K ++ A G+ +++ G T+ +L+ G C G L L +M S
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIALQLVGKMMVDGKSP 561
Query: 394 SLHTFSVLISYLCKSNRLQEARDLL------RQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
T +++I CK + + A +L R+ R D++ Y +VI G C+S N
Sbjct: 562 DEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS----YTNVIWGLCRS-NCR 616
Query: 448 EANAIVVE--MEEKCKPDKFTFTILI 471
E I++E + P T+++LI
Sbjct: 617 EDGVILLERMISAGIVPSIATWSVLI 642
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 110/223 (49%), Gaps = 2/223 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE- 174
Y ++ +LC+ A+ L + M + P + RLD ++++ +
Sbjct: 424 VYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 483
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
Q ++ N V Y+ LL L K N++++A L RE+ +ST+N L+ G C+AG
Sbjct: 484 EQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGL 543
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL-KSKFSPNVRSY 293
A + + M G SPD +T N ++ C+ + +RA +L V + K+ P+V SY
Sbjct: 544 PGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISY 603
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
T VI G C+ + ++ L + M +G P+ T++ LI+ F+
Sbjct: 604 TNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLINCFI 646
>AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2056999-2060242 REVERSE
LENGTH=997
Length = 997
Score = 201 bits (512), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 134/489 (27%), Positives = 227/489 (46%), Gaps = 62/489 (12%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFAL------VDRLDVSKE 170
+N L+ + C G HS A L M G +P + L+ S D LD++++
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434
Query: 171 -----LLAEAQCNKVQVNAVV------------------------------YDNLLSVLV 195
L A NK+ V++ Y +L+ L
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
+K++ A LF E+ R + T+ +++ C AG +++A K+ N MR GC+P++V
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
TY L+H + K+V A +L E L PN+ +Y+ +I G+CK ++++A +F+
Sbjct: 555 TYTALIHAYLKAKKVSYANELF-ETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFER 613
Query: 316 M----------------DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
M D + +PN T+ +L+DGF K ++ A + M GC P+
Sbjct: 614 MCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPN 673
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
+ + +LI+G C+VGK++ ++ EM+ A+L+T+S LI K R A +L
Sbjct: 674 QIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 733
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKG 478
++ P IY +IDG CK G DEA ++ MEEK C+P+ T+T +I G M G
Sbjct: 734 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIG 793
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSY- 537
+ + + +M + G +P+ +T R+L K+G A + E + + + Y
Sbjct: 794 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYR 853
Query: 538 --YEGTNSD 544
EG N +
Sbjct: 854 KVIEGFNKE 862
Score = 165 bits (417), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/443 (24%), Positives = 204/443 (46%), Gaps = 34/443 (7%)
Query: 17 FTRIQASKIALARCFTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFG 76
++ + A+ + L + ++ T C G K + +++ F+ S ++VL+Y
Sbjct: 436 YSEMLAAGVVLNK-INVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYL- 493
Query: 77 KHLTPSLVLEVVKRLNNPILGFKFFQFTREKLN-VHHSFWTYNMLLRSLCQKGLHSSAKL 135
N + F F K + +TY +++ S C+ GL A+
Sbjct: 494 --------------CNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARK 539
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV 195
++ MR G P+ L+ ++ ++ + EL N V Y L+
Sbjct: 540 WFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHC 599
Query: 196 KHNKLDDAICLFRELMRSHSHLETS----------------TFNVLMGGLCSAGDVDEAF 239
K +++ A +F + S + T+ L+ G C + V+EA
Sbjct: 600 KAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEAR 659
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
K L+ M GC P+ + Y+ L+ GLC++ ++D A+++ E+ + F + +Y+++I
Sbjct: 660 KLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMS-EHGFPATLYTYSSLIDR 718
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
Y K+ + AS + +M + PN + +IDG KVG D A + + M GC P+
Sbjct: 719 YFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPN 778
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VVT+T++I+G+ +GK+ L+L M ++ ++ + T+ VLI + CK+ L A +LL
Sbjct: 779 VVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLE 838
Query: 420 QLKRTDIVPQPSIYNHVIDGYCK 442
++K+T + Y VI+G+ K
Sbjct: 839 EMKQTHWPTHTAGYRKVIEGFNK 861
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 168/363 (46%), Gaps = 17/363 (4%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY+ +L LC A LL++ M+ G + D +V SF ++ +++ E
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N V Y L+ +K K+ A LF ++ T++ L+ G C AG V
Sbjct: 545 REVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQV 604
Query: 236 DEAFKFLNGMRSFGCSPDI----------------VTYNTLLHGLCRIKEVDRARDLLKE 279
++A + M PD+ VTY LL G C+ V+ AR LL
Sbjct: 605 EKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDA 664
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ ++ PN Y +I G CK+ K+ EA + EM G +T++SLID + KV
Sbjct: 665 MSMEG-CEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVK 723
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
D A + KML + C P+VV +T +I+G C+VGK + L M + ++ T++
Sbjct: 724 RQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYT 783
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+I +++ +LL ++ + P Y +ID CK+G +D A+ ++ EM++
Sbjct: 784 AMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQT 843
Query: 460 CKP 462
P
Sbjct: 844 HWP 846
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 123/497 (24%), Positives = 217/497 (43%), Gaps = 44/497 (8%)
Query: 70 RVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGL 129
+ L F + L+ SLV+EV++ + P FF + ++ H+ YN L+ + +
Sbjct: 121 KFLRQFREKLSESLVIEVLRLIARPSAVISFFVWAGRQIGYKHTAPVYNALVDLIVRDDD 180
Query: 130 HSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDN 189
+ +R D K L LV ++ E L + + + + Y+
Sbjct: 181 EKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNC 240
Query: 190 LLSVLVKHNKLDDAICLFREL-----------MRSHSH--------------LETSTF-- 222
L+ +K ++LD A + RE+ +R ++ +ET F
Sbjct: 241 LIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFVP 300
Query: 223 -----NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
L+ GLC A +EA FLN MR+ C P++VTY+TLL G K++ R + +L
Sbjct: 301 DTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVL 360
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+ ++ + P+ + + +++ YC A L +M + G P +N LI
Sbjct: 361 NMMMMEGCY-PSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI-- 417
Query: 338 VGNMDS--------ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
G+ DS A Y +ML G + + +S C GK + EM +
Sbjct: 418 CGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQ 477
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
T+S +++YLC +++++ A L ++KR +V Y ++D +CK+G +++A
Sbjct: 478 GFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQA 537
Query: 450 NAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
EM E C P+ T+T LI + + A +F ML+ GC P+ +T L
Sbjct: 538 RKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDG 597
Query: 509 LLKSGMPGEAARIKESL 525
K+G +A +I E +
Sbjct: 598 HCKAGQVEKACQIFERM 614
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 164/356 (46%), Gaps = 13/356 (3%)
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
FK + E+ NV TY LL C+ A+ L D M +G P+ + L+
Sbjct: 627 FKQYDDNSERPNV----VTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALID 682
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
V +LD ++E+ E + Y +L+ K + D A + +++ +
Sbjct: 683 GLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAP 742
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ ++ GLC G DEA+K + M GC P++VTY ++ G I +++ +LL
Sbjct: 743 NVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELL 802
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+ +G K +PN +Y +I CK + A +L +EM ++ + + +I+GF K
Sbjct: 803 ERMGSKG-VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNK 861
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL-- 395
+LG+ ++ P + + LI+ + ++ L L E+ T SA+L
Sbjct: 862 --EFIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVAT--FSATLVD 917
Query: 396 --HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
T++ LI LC +N+++ A L ++ + ++P+ + +I G ++ + EA
Sbjct: 918 YSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEA 973
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 3/230 (1%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y ++ LC+ G A L M G P+ ++ F ++ +++ ELL
Sbjct: 747 YTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMG 806
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
V N V Y L+ K+ LD A L E+ ++H T+ + ++ G +
Sbjct: 807 SKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGF--NKEFI 864
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS-YTT 295
E+ L+ + +P + Y L+ L + + ++ A LL+EV S + S Y +
Sbjct: 865 ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNS 924
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
+I C +K++ A LF EM + G P +F SLI G + + AL
Sbjct: 925 LIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEAL 974
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 95/219 (43%), Gaps = 13/219 (5%)
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
+P+ T+N LI F+K +DSA I+++M D T C+VGK L
Sbjct: 232 RPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALT 291
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L + T N ++ LIS LC+++ +EA D L +++ T +P Y+ ++ G
Sbjct: 292 L---VETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCL 348
Query: 442 KSGNVDEANAIV-VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
+ ++ + M E C P F L+ +C G A + KM+ G P +
Sbjct: 349 NKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYV 408
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYE 539
IL G K+SL+ + D +K+Y E
Sbjct: 409 VYNILI---------GSICGDKDSLNCDLLDLAEKAYSE 438
>AT1G12700.1 | Symbols: | ATP binding;nucleic acid
binding;helicases | chr1:4323722-4326227 REVERSE
LENGTH=735
Length = 735
Score = 199 bits (507), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 219/421 (52%), Gaps = 2/421 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL T+N L++ L +G S A +L D M +G PD +V+
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTS 210
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
++ +LL + + V+ + Y ++ L + +D AI LF+E+ T+N L+
Sbjct: 211 LALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLV 270
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC AG ++ L M S P+++T+N LL + ++ A +L KE+ +
Sbjct: 271 RGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEM-ITRGI 329
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
SPN+ +Y T++ GYC +++ EA+++ D M R+ P+ TF SLI G+ V +D +
Sbjct: 330 SPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMK 389
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+++ + G + VT++ L++G+C+ GK+ +L+ EM + + + T+ +L+ LC
Sbjct: 390 VFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLC 449
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKF 465
+ +L++A ++ L+++ + +Y +I+G CK G V++A + + K KP+
Sbjct: 450 DNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVM 509
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
T+T++I+G C KG +A ++ KM G +P++ T L L+ G +A++ E +
Sbjct: 510 TYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEM 569
Query: 526 H 526
Sbjct: 570 K 570
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 219/422 (51%), Gaps = 6/422 (1%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSA-KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
+ H+ +T N+++ C+ A +L M+ G PD+ L+ L ++ +
Sbjct: 119 IAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKL-GYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
L+ N Q + V Y+++++ + + A+ L R++ + + T++ ++
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
LC G +D A M + G +VTYN+L+ GLC+ + + LLK++ + + P
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM-VSREIVP 296
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
NV ++ ++ + K K++EA+ L+ EM G PN T+N+L+DG+ + A +
Sbjct: 297 NVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNML 356
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
M+ + C PD+VTFTSLI+GYC V +V+ G+ ++ ++ R + A+ T+S+L+ C+S
Sbjct: 357 DLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQS 416
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPD--KFT 466
+++ A +L +++ ++P Y ++DG C +G +++A I ++ +K K D
Sbjct: 417 GKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDL-QKSKMDLGIVM 475
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+T +I G C G+ DA +F + G P+ +T ++ S L K G EA + +
Sbjct: 476 YTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME 535
Query: 527 EN 528
E+
Sbjct: 536 ED 537
Score = 178 bits (452), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 109/376 (28%), Positives = 195/376 (51%), Gaps = 2/376 (0%)
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
S+ A + ++ + + + N + N + +++ + K A + ++M+
Sbjct: 96 SAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYE 155
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
+T+TFN L+ GL G V EA ++ M GC PD+VTYN++++G+CR + A DL
Sbjct: 156 PDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDL 215
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
L+++ ++ +V +Y+T+I C+ + A SLF EM+ G K + T+NSL+ G
Sbjct: 216 LRKMEERN-VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
K G + + K M+ P+V+TF L++ + + GK+ +L+ EM TR IS ++
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
T++ L+ C NRL EA ++L + R P + +I GYC VD+ + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394
Query: 457 EEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
++ + T++IL+ G C G+ A +F +M++ G PD +T IL L +G
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454
Query: 516 GEAARIKESLHENQGD 531
+A I E L +++ D
Sbjct: 455 EKALEIFEDLQKSKMD 470
Score = 176 bits (445), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 176/352 (50%), Gaps = 1/352 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ NV +TY+ ++ SLC+ G +A L+ M G LV +
Sbjct: 220 EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKW 279
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ LL + ++ N + ++ LL V VK KL +A L++E++ T+N L
Sbjct: 280 NDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTL 339
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
M G C + EA L+ M CSPDIVT+ +L+ G C +K VD + + + K
Sbjct: 340 MDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS-KRG 398
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
N +Y+ ++ G+C+ K+K A LF EM G P+ T+ L+DG G ++ AL
Sbjct: 399 LVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKAL 458
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
I++ + +V +T++IEG C+ GKV +L+ + + + ++ T++V+IS L
Sbjct: 459 EIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGL 518
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
CK L EA LLR+++ P YN +I + + G++ + ++ EM+
Sbjct: 519 CKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/351 (29%), Positives = 171/351 (48%), Gaps = 37/351 (10%)
Query: 199 KLDDAICLFRELMRSH----------------------------SHLETS-------TFN 223
K DDAI LF+E++RS LE + T N
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+++ C A+ L + G PD T+NTL+ GL +V A L+ + ++
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM-VE 186
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ P+V +Y ++++G C+ A L +M+ K + FT++++ID + G +D+
Sbjct: 187 NGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
A+ ++K+M G VVT+ SL+ G C+ GK N G L +M +R I ++ TF+VL+
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCKP 462
K +LQEA +L +++ I P YN ++DGYC + EAN ++ + + KC P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
D TFT LI G+CM R D + +F + G + +T IL +SG
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSG 417
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 143/290 (49%), Gaps = 1/290 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N+LL ++G A LY M G P+ L+ + + +RL + +L
Sbjct: 300 TFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLM 359
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
NK + V + +L+ ++DD + +FR + + T+++L+ G C +G +
Sbjct: 360 VRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
A + M S G PD++TY LL GLC ++++A ++ +++ KSK + YTT
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQ-KSKMDLGIVMYTT 478
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G CK K+++A +LF + G KPN T+ +I G K G++ A + +KM G
Sbjct: 479 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 538
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
P+ T+ +LI + R G + L EM + SA + ++I L
Sbjct: 539 NAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L G+ IK+ D A L +E+ ++S+ P++ ++ S + + +++ +
Sbjct: 60 LRSGIVDIKK-DDAIALFQEM-IRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELN 117
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G N +T N +I+ F + A + K++ G PD TF +LI+G GKV+
Sbjct: 118 GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEA 177
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+ L M + T++ +++ +C+S A DLLR+++ ++ Y+ +ID
Sbjct: 178 VVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDS 237
Query: 440 YCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
C+ G +D A ++ EME K K T+ L+ G C G+ D ++ M++ P+
Sbjct: 238 LCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPN 297
Query: 499 EITVRILSSCLLKSGMPGEA 518
IT +L +K G EA
Sbjct: 298 VITFNVLLDVFVKEGKLQEA 317
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 199 bits (506), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 221/458 (48%), Gaps = 35/458 (7%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
++L + H+ +TYN+L+ C++ S A L M G P L L++ + R+
Sbjct: 112 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + + + + L+ L HNK +A+ L +++ T+ V+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---- 281
+ GLC GD+D AF LN M + ++V Y+T++ LC+ + D A +L E+
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 282 ------------------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
++ K +PNV ++ +I + K K+ EA
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
L+DEM + P+ FT++SLI+GF +D A +++ M+ C P+VVT+ +LI G+C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ +++ G++L+ EM+ R + + T++ LI ++ A+ + +Q+ + P
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
YN ++DG CK+G +++A + ++ K +P +T+ I+I G C G+ D +F +
Sbjct: 472 TYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSL 531
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
G PD I + S + G+ EA + + E+
Sbjct: 532 SLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMRED 569
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 183/383 (47%), Gaps = 9/383 (2%)
Query: 53 FVKIVSTLFLHSNSLDTRVL--SYFGKHLTPSLVLE--VVKRL---NNPILGFKFFQFTR 105
F ++ LFLH+ + + L + P+LV VV L + L F
Sbjct: 193 FTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLN-KM 251
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E + + Y+ ++ SLC+ A L+ M G P+ L+S +R
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ LL++ K+ N V ++ L+ VK KL +A L+ E+++ + T++ L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G C +DEA M S C P++VTYNTL++G C+ K +D +L +E+ +
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRG- 430
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
N +YTT+I G+ + A +F +M G PN T+N+L+DG K G ++ A+
Sbjct: 431 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM 490
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+++ + P + T+ +IEG C+ GKV G DL+ ++ + + + ++ +IS
Sbjct: 491 VVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGF 550
Query: 406 CKSNRLQEARDLLRQLKRTDIVP 428
C+ +EA L R+++ +P
Sbjct: 551 CRKGLKEEADALFRKMREDGPLP 573
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 168/364 (46%), Gaps = 43/364 (11%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
KLDDAI LF +++S FN L+ + D M+ G S ++ TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
L++ CR ++ A LL ++ +K + P++ + +++++GYC ++ +A +L D+M
Sbjct: 125 ILINCFCRRSQISLALALLGKM-MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE 183
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G +P+ TF +LI G A+ + +M+ GC P++VT+ ++ G C+ G ++
Sbjct: 184 MGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243
Query: 379 -----------------------------------GLDLWHEMNTRNISASLHTFSVLIS 403
L+L+ EM + + ++ T+S LIS
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKP 462
LC R +A LL + I P +N +ID + K G + EA + EM + P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D FT++ LI G CM R +A +F M++ C P+ +T L + K A RI
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCK------AKRID 417
Query: 523 ESLH 526
E +
Sbjct: 418 EGVE 421
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 125/244 (51%), Gaps = 1/244 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+ + ++G A+ LYD M PD L++ F + DRLD +K +
Sbjct: 332 TFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 391
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N V Y+ L++ K ++D+ + LFRE+ + T T+ L+ G A D
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D A M S G P+I+TYNTLL GLC+ ++++A ++ E +SK P + +Y
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAM-VVFEYLQRSKMEPTIYTYNI 510
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G CK K+++ LF + G KP+ +N++I GF + G + A +++KM G
Sbjct: 511 MIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570
Query: 356 CPPD 359
PD
Sbjct: 571 PLPD 574
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+KS+ P++ + ++S K+ K SL ++M R G N +T+N LI+ F + +
Sbjct: 77 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 136
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
AL + KM+ G P +VT +SL+ GYC +++ + L +M TF+ L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKC 460
I L N+ EA L+ ++ + P Y V++G CK G++D A ++ +ME K
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 256
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR 520
+ + ++ +I C DA+ +F +M G P+ IT L SCL +A+R
Sbjct: 257 EANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASR 316
Query: 521 IKESLHENQ 529
+ + E +
Sbjct: 317 LLSDMIERK 325
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 104/221 (47%), Gaps = 1/221 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ +TY+ L+ C AK +++ M P+ L++ F R+D
Sbjct: 358 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRID 417
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
EL E + N V Y L+ + D+A +F++++ H T+N L+
Sbjct: 418 EGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLL 477
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G +++A ++ P I TYN ++ G+C+ +V+ DL + LK
Sbjct: 478 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-V 536
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
P+V Y T+ISG+C+ +EA +LF +M G P++ T
Sbjct: 537 KPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 199 bits (505), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 220/458 (48%), Gaps = 35/458 (7%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + H +TY++ + C++ S A + M G PD L L++ + R+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + + + L+ L HNK +A+ L ++++ + T+ +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---- 281
+ GLC GD+D A L M D+V YNT++ GLC+ K +D A +L E+
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 282 ------------------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
++ K +PNV +++ +I + K K+ EA
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
L+DEM + P+ FT++SLI+GF +D A +++ M+ C P+VVT+++LI+G+C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ +V G++L+ EM+ R + + T++ LI ++ A+ + +Q+ + P
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
YN ++DG CK+G + +A + ++ +PD +T+ I+I G C G+ D +F +
Sbjct: 470 TYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNL 529
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
G SP+ I + S + G EA + + + E+
Sbjct: 530 SLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKED 567
Score = 172 bits (437), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/431 (25%), Positives = 213/431 (49%), Gaps = 37/431 (8%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+ L+ L S A L D M G PD G +V+ +D++ LL +
Sbjct: 189 FTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKK 248
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL--------MRSHSHL--------- 217
+ K++ + V+Y+ ++ L K+ +DDA+ LF E+ + ++S L
Sbjct: 249 MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGR 308
Query: 218 ------------------ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
TF+ L+ G + EA K + M PDI TY++
Sbjct: 309 WSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSS 368
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L++G C +D A+ + + + K F PNV +Y+T+I G+CK +++E LF EM +
Sbjct: 369 LINGFCMHDRLDEAKHMFELMISKDCF-PNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G N T+ +LI GF + + D+A ++K+M+ G P+++T+ L++G C+ GK+
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+ ++ + + ++T++++I +CK+ ++++ +L L + P YN +I G
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547
Query: 440 YCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+C+ G+ +EA++++ +M+E P+ T+ LI G + + +M + G + D
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607
Query: 499 EITVRILSSCL 509
T+ ++++ L
Sbjct: 608 ASTIGLVTNML 618
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 186/364 (51%), Gaps = 8/364 (2%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
++D + +L + ++ + V ++ LLS + K NK + I L ++ + T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+ + C + A L M G PDIVT ++LL+G C K + A L+ ++ ++
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM-VE 181
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ P+ ++TT+I G +K EA +L D+M + G +P+ T+ ++++G K G++D
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
AL + KKM DVV + ++I+G C+ ++ L+L+ EM+ + I + T+S LIS
Sbjct: 242 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLIS 301
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKP 462
LC R +A LL + I P ++ +ID + K G + EA + EM + P
Sbjct: 302 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 361
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D FT++ LI G CM R +A +F M++ C P+ +T L K A R++
Sbjct: 362 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCK------AKRVE 415
Query: 523 ESLH 526
E +
Sbjct: 416 EGME 419
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 176/352 (50%), Gaps = 2/352 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+S+ A +++ ++ L + Q + + Y ++ + ++L A+ + ++M+
Sbjct: 89 LLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLG 148
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ T + L+ G C + + +A ++ M G PD T+ TL+HGL + A
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L+ ++ ++ P++ +Y TV++G CK + A SL +M++ + + +N++IDG
Sbjct: 209 ALVDQM-VQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDG 267
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
K +MD AL ++ +M G PDV T++SLI C G+ + L +M R I+ +
Sbjct: 268 LCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPN 327
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ TFS LI K +L EA L ++ + I P Y+ +I+G+C +DEA +
Sbjct: 328 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 387
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
M K C P+ T++ LI G C R + + +F +M G + +T L
Sbjct: 388 LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 147/303 (48%), Gaps = 14/303 (4%)
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG-LCRIKEVDRARDLLKEVGLKSKFS 287
LC +G + +F +G Y +L L I +VD A DL ++ +KS+
Sbjct: 33 LCGSGCWERSFASASG-----------DYREILRNRLSDIIKVDDAVDLFGDM-VKSRPF 80
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P++ + ++S K++K + SL ++M G + +T++ I+ F + + AL +
Sbjct: 81 PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
KM+ G PD+VT +SL+ GYC +++ + L +M TF+ LI L
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFL 200
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFT 466
N+ EA L+ Q+ + P Y V++G CK G++D A +++ +ME+ K + D
Sbjct: 201 HNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ +I G C DA+ +F +M G PD T L SCL G +A+R+ +
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320
Query: 527 ENQ 529
E +
Sbjct: 321 ERK 323
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/256 (27%), Positives = 124/256 (48%), Gaps = 1/256 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ +TY+ L+ C AK +++ M P+ L+ F R++
Sbjct: 356 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVE 415
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
EL E + N V Y L+ + D+A +F++++ H T+N+L+
Sbjct: 416 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILL 475
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G + +A ++ PDI TYN ++ G+C+ +V+ +L + LK
Sbjct: 476 DGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG-V 534
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
SPNV +Y T+ISG+C+ +EA SL +M G PN+ T+N+LI ++ G+ +++
Sbjct: 535 SPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAE 594
Query: 347 IYKKMLFHGCPPDVVT 362
+ K+M G D T
Sbjct: 595 LIKEMRSCGFAGDAST 610
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 197 bits (501), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 204/409 (49%), Gaps = 2/409 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + + ++YN+L+ C++ A + M G PD L L++ + R+
Sbjct: 107 QNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRI 166
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + Q N V ++ L+ L HNK +A+ L ++ + T+ +
Sbjct: 167 SEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC GD+D A L M D+V Y T++ LC K V+ A +L E+ K
Sbjct: 227 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKG- 285
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PNV +Y ++I C + +AS L +M PN TF++LID FVK G + A
Sbjct: 286 IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 345
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+Y +M+ PD+ T++SLI G+C +++ ++ M +++ ++ T++ LI
Sbjct: 346 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGF 405
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDK 464
CK+ R++E +L R++ + +V YN +I G ++G+ D A I +M + PD
Sbjct: 406 CKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDI 465
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
T++IL+ G C G+ A+V+F + + PD T I+ + K+G
Sbjct: 466 ITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAG 514
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 37/430 (8%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+ L S A L D M G PD G +V+ +D++ LL +
Sbjct: 187 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 246
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS---- 231
+ K++ + V+Y ++ L + ++DA+ LF E+ T+N L+ LC+
Sbjct: 247 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 306
Query: 232 -------------------------------AGDVDEAFKFLNGMRSFGCSPDIVTYNTL 260
G + EA K + M PDI TY++L
Sbjct: 307 SDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 366
Query: 261 LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
++G C +D A+ + + + K F PNV +Y T+I G+CK +++E LF EM + G
Sbjct: 367 INGFCMHDRLDEAKHMFELMISKDCF-PNVVTYNTLIKGFCKAKRVEEGMELFREMSQRG 425
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
N T+N+LI G + G+ D A I+KKM+ G PPD++T++ L++G C+ GK+ L
Sbjct: 426 LVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKAL 485
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
++ + + ++T++++I +CK+ ++++ DL L + P IY +I G+
Sbjct: 486 VVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGF 545
Query: 441 CKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
C+ G +EA+A+ EM+E P+ T+ LI G + + +M + G D
Sbjct: 546 CRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDA 605
Query: 500 ITVRILSSCL 509
T+ ++ + L
Sbjct: 606 STISMVINML 615
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 110/364 (30%), Positives = 182/364 (50%), Gaps = 8/364 (2%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
+LD + +L E ++ + V ++ LLS + K NK D I L + + ++N
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+L+ C + A L M G PDIVT ++LL+G C K + A L+ ++
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQM-FV 178
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
++ PN ++ T+I G +K EA +L D M G +P+ FT+ ++++G K G++D
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 238
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
AL + KKM DVV +T++I+ C VN L+L+ EM+ + I ++ T++ LI
Sbjct: 239 ALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIR 298
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKP 462
LC R +A LL + I P ++ +ID + K G + EA + EM + P
Sbjct: 299 CLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D FT++ LI G CM R +A +F M++ C P+ +T L K A R++
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCK------AKRVE 412
Query: 523 ESLH 526
E +
Sbjct: 413 EGME 416
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 118/420 (28%), Positives = 193/420 (45%), Gaps = 37/420 (8%)
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
LP L+S+ A +++ D+ L Q ++ + Y+ L++ + ++L A+
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALA 136
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH--- 262
+ ++M+ + T + L+ G C + EA ++ M P+ VT+NTL+H
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 263 --------------------------------GLCRIKEVDRARDLLKEVGLKSKFSPNV 290
GLC+ ++D A LLK++ K K +V
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME-KGKIEADV 255
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
YTT+I C + +A +LF EMD G +PN T+NSLI G A +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
M+ P+VVTF++LI+ + + GK+ L+ EM R+I + T+S LI+ C +R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTI 469
L EA+ + + D P YN +I G+CK+ V+E + EM ++ + T+
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 470 LIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
LI G G A IF KM++ G PD IT IL L K G +A + E L +++
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 175/378 (46%), Gaps = 25/378 (6%)
Query: 12 MTLSLFTRIQASKIALARCFTLTQLTYASCDKGSITKPEAWFVKI----VSTLFLHSNSL 67
+ LSL +++ KI A T + A C+ ++ F ++ + + NSL
Sbjct: 238 LALSLLKKMEKGKIE-ADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Query: 68 DTRVLSYFGKHLTPSLVL-EVVKRLNNP-ILGFKFF--QFTRE--------------KLN 109
R L +G+ S +L ++++R NP ++ F F +E K +
Sbjct: 297 -IRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRS 355
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
+ +TY+ L+ C AK +++ M P+ L+ F R++
Sbjct: 356 IDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGM 415
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
EL E + N V Y+ L+ L + D A +F++++ + T+++L+ GL
Sbjct: 416 ELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGL 475
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C G +++A ++ PDI TYN ++ G+C+ +V+ DL + LK PN
Sbjct: 476 CKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPN 534
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V YTT+ISG+C+ +EA +LF EM GT PN+ T+N+LI ++ G+ ++ + K
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIK 594
Query: 350 KMLFHGCPPDVVTFTSLI 367
+M G D T + +I
Sbjct: 595 EMRSCGFVGDASTISMVI 612
>AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3218133-3219929 FORWARD
LENGTH=598
Length = 598
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/425 (28%), Positives = 216/425 (50%), Gaps = 7/425 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+++ C+ G ++A + D M PD ++ S +L + E+L
Sbjct: 174 TYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + Y L+ + + + A+ L E+ + T+NVL+ G+C G +
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRL 290
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA KFLN M S GC P+++T+N +L +C A LL ++ L+ FSP+V ++
Sbjct: 291 DEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADM-LRKGFSPSVVTFNI 349
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+ C+ + A + ++M + G +PN+ ++N L+ GF K MD A+ ++M+ G
Sbjct: 350 LINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRG 409
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
C PD+VT+ +++ C+ GKV +++ ++++++ S L T++ +I L K+ + +A
Sbjct: 410 CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAI 469
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGH 474
LL +++ D+ P Y+ ++ G + G VDEA E E +P+ TF ++ G
Sbjct: 470 KLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGL 529
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLK 534
C + AI M+ GC P+E + IL L GM EA + L N+G +K
Sbjct: 530 CKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELC-NKG-LMK 587
Query: 535 KSYYE 539
KS E
Sbjct: 588 KSSAE 592
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/390 (28%), Positives = 194/390 (49%), Gaps = 2/390 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
++++V TYN +LRSLC G A + D M PD L+ + +
Sbjct: 196 DRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGV 255
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ +LL E + + V Y+ L++ + K +LD+AI ++ S T N++
Sbjct: 256 GHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNII 315
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ +CS G +A K L M G SP +VT+N L++ LCR + RA D+L+++ +
Sbjct: 316 LRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHG 374
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PN SY ++ G+CK KM A + M G P+ T+N+++ K G ++ A+
Sbjct: 375 CQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAV 434
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
I ++ GC P ++T+ ++I+G + GK + L EM +++ T+S L+ L
Sbjct: 435 EILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGL 494
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA-NAIVVEMEEKCKPDK 464
+ ++ EA + +R I P +N ++ G CKS D A + +V + CKP++
Sbjct: 495 SREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNE 554
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
++TILI G +G A +A+ + ++ G
Sbjct: 555 TSYTILIEGLAYEGMAKEALELLNELCNKG 584
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 101/375 (26%), Positives = 172/375 (45%), Gaps = 34/375 (9%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLN 243
V +N L +V+ +L++ F E M H ++ + L+ G C G +A K L
Sbjct: 103 VESNNHLRQMVRTGELEEGF-KFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILE 161
Query: 244 GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---------------------- 281
+ G PD++TYN ++ G C+ E++ A +L +
Sbjct: 162 ILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLK 221
Query: 282 ---------LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
L+ P+V +YT +I C+ S + A L DEM G P+ T+N L+
Sbjct: 222 QAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLV 281
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
+G K G +D A+ M GC P+V+T ++ C G+ L +M + S
Sbjct: 282 NGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFS 341
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
S+ TF++LI++LC+ L A D+L ++ + P YN ++ G+CK +D A
Sbjct: 342 PSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEY 401
Query: 453 VVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLK 511
+ M + C PD T+ ++ C G+ DA+ I ++ + GCSP IT + L K
Sbjct: 402 LERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAK 461
Query: 512 SGMPGEAARIKESLH 526
+G G+A ++ + +
Sbjct: 462 AGKTGKAIKLLDEMR 476
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 113/386 (29%), Positives = 194/386 (50%), Gaps = 2/386 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
++L + H+ +TYN+L+ C++ S A L M G P L L++ + R+
Sbjct: 37 QRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 96
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + + + + L+ L HNK +A+ L +++ T+ V+
Sbjct: 97 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 156
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC GD+D AF LN M + D+V +NT++ LC+ + VD A +L KE+ K
Sbjct: 157 VNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG- 215
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PNV +Y+++IS C + +AS L +M PN TFN+LID FVK G A
Sbjct: 216 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 275
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++ M+ PD+ T+ SLI G+C +++ ++ M +++ L T++ LI
Sbjct: 276 KLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGF 335
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDK 464
CKS R+++ +L R++ +V Y +I G G+ D A + +M + PD
Sbjct: 336 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 395
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKM 490
T++IL+ G C G+ A+ +F M
Sbjct: 396 MTYSILLDGLCNNGKLEKALEVFDYM 421
Score = 178 bits (451), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 195/395 (49%), Gaps = 2/395 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +++ LC++G A L + M D + ++ S +D + L E
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ N V Y +L+S L + + DA L +++ + TFN L+ G
Sbjct: 212 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 271
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA K + M PDI TYN+L++G C +D+A+ + + + K F P++ +Y T
Sbjct: 272 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF-PDLDTYNT 330
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+CK ++++ + LF EM G + T+ +LI G G+ D+A ++K+M+ G
Sbjct: 331 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 390
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PPD++T++ L++G C GK+ L+++ M I ++ ++ +I +CK+ ++ +
Sbjct: 391 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 450
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGH 474
DL L + P YN +I G C + EA A++ +M+E PD T+ LI H
Sbjct: 451 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAH 510
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
G + + +M + D T+ ++++ L
Sbjct: 511 LRDGDKAASAELIREMRSCRFVGDASTIGLVANML 545
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/381 (29%), Positives = 178/381 (46%), Gaps = 22/381 (5%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
++ LLS + K K D I L ++ R T+N+L+ C + A L M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
G P IVT ++LL+G C K + A L+ ++ ++ + P+ ++TT+I G +K
Sbjct: 73 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM-VEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
EA +L D M + G +PN T+ +++G K G++D A + KM DVV F ++
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I+ C+ V+ L+L+ EM T+ I ++ T+S LIS LC R +A LL + I
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIV 485
P +N +ID + K G EA + +M + PD FT+ LI G CM R A
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 486 IFYKMLATGCSPDEITVRILSSCLLKS----------------GMPGEAAR----IKESL 525
+F M++ C PD T L KS G+ G+ I+
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 526 HENQGDSLKKSYYEGTNSDVP 546
H+ D+ +K + + + VP
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVP 392
Score = 156 bits (395), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 2/368 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+S+ A + + D+ L + Q + N Y+ L++ + +++ A+ L ++M+
Sbjct: 16 LLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLG 75
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
T + L+ G C + +A ++ M G PD +T+ TL+HGL + A
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L+ + ++ PN+ +Y V++G CK + A +L ++M+ + + + FN++ID
Sbjct: 136 ALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
K ++D AL ++K+M G P+VVT++SLI C G+ + L +M + I+ +
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 254
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
L TF+ LI K + EA L + + I P YN +I+G+C +D+A +
Sbjct: 255 LVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFE 314
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
M K C PD T+ LI G C R D +F +M G D +T L L G
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374
Query: 514 MPGEAARI 521
A ++
Sbjct: 375 DCDNAQKV 382
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 122/249 (48%), Gaps = 1/249 (0%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+KS+ P++ + ++S K+ K SL ++M R G N +T+N LI+ F + +
Sbjct: 2 VKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQI 61
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
AL + KM+ G P +VT +SL+ GYC +++ + L +M TF+ L
Sbjct: 62 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 121
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKC 460
I L N+ EA L+ ++ + P Y V++G CK G++D A ++ +ME K
Sbjct: 122 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKI 181
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR 520
+ D F +I C DA+ +F +M G P+ +T L SCL G +A++
Sbjct: 182 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 241
Query: 521 IKESLHENQ 529
+ + E +
Sbjct: 242 LLSDMIEKK 250
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ +TYN L+ C AK +++ M PD L+ F R++
Sbjct: 283 KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVE 342
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
EL E + + V Y L+ L D+A +F++++ + T+++L+
Sbjct: 343 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 402
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC+ G +++A + + M+ DI Y T++ G+C+ +VD DL + LK
Sbjct: 403 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-V 461
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
PNV +Y T+ISG C ++EA +L +M G P++ T+N+LI ++ G+ ++
Sbjct: 462 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAE 521
Query: 347 IYKKM 351
+ ++M
Sbjct: 522 LIREM 526
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/425 (27%), Positives = 210/425 (49%), Gaps = 3/425 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + H+ +TY++ + C++ S A + M G P L L++ F +R+
Sbjct: 102 QNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRI 161
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + Q + V + L+ L +HNK +A+ L ++ + T+ +
Sbjct: 162 SEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV 221
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC G+ D A LN M D+V YNT++ GLC+ K +D A DL ++ K
Sbjct: 222 INGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKG- 280
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
P+V +Y +IS C + +AS L +M P+ FN+LID FVK G + A
Sbjct: 281 IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE 340
Query: 346 GIYKKML-FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+Y +M+ C PDVV + +LI+G+C+ +V G++++ EM+ R + + T++ LI
Sbjct: 341 KLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG 400
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
++ A+ + +Q+ + P YN ++DG C +GNV+ A + M+++ K D
Sbjct: 401 FFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLD 460
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
T+T +I C G+ D +F + G P+ +T + S + G+ EA +
Sbjct: 461 IVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFV 520
Query: 524 SLHEN 528
+ E+
Sbjct: 521 EMKED 525
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/396 (27%), Positives = 203/396 (51%), Gaps = 3/396 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ L+ L Q S A L + M G PD G +++ D++ LL +
Sbjct: 182 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ K++ + V+Y+ ++ L K+ +DDA LF ++ + T+N L+ LC+ G
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS-PNVRSYT 294
+A + L+ M +PD+V +N L+ + ++ A L E+ +KSK P+V +Y
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEM-VKSKHCFPDVVAYN 360
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+I G+CK +++E +F EM + G N T+ +LI GF + + D+A ++K+M+
Sbjct: 361 TLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSD 420
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G PD++T+ L++G C G V L ++ M R++ + T++ +I LCK+ ++++
Sbjct: 421 GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAG 473
DL L + P Y ++ G+C+ G +EA+A+ VEM+E P+ T+ LI
Sbjct: 481 WDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRA 540
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
G + + +M + G + D T ++++ L
Sbjct: 541 RLRDGDEAASAELIKEMRSCGFAGDASTFGLVTNML 576
Score = 155 bits (391), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 157/326 (48%), Gaps = 9/326 (2%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V + LLS + K NK D I L ++ T+++ + C + A L
Sbjct: 76 VEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGK 135
Query: 245 MRSFGCSPDIVTYNTLLHGLC---RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
M G P IVT N+LL+G C RI E D + E+G + P+ ++TT++ G
Sbjct: 136 MMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG----YQPDTVTFTTLVHGLF 191
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
+ +K EA +L + M G +P+ T+ ++I+G K G D AL + KM DVV
Sbjct: 192 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 251
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
+ ++I+G C+ ++ DL+++M T+ I + T++ LIS LC R +A LL +
Sbjct: 252 IYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDM 311
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM--EEKCKPDKFTFTILIAGHCMKGR 479
+I P +N +ID + K G + EA + EM + C PD + LI G C R
Sbjct: 312 LEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKR 371
Query: 480 APDAIVIFYKMLATGCSPDEITVRIL 505
+ + +F +M G + +T L
Sbjct: 372 VEEGMEVFREMSQRGLVGNTVTYTTL 397
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 167/320 (52%), Gaps = 3/320 (0%)
Query: 188 DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRS 247
+NL +++ KLDDAI LF ++++S F+ L+ + D M++
Sbjct: 44 ENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQN 103
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMK 307
G S ++ TY+ ++ CR ++ A +L ++ +K + P++ + ++++G+C +++
Sbjct: 104 LGISHNLYTYSIFINYFCRRSQLSLALAILGKM-MKLGYGPSIVTLNSLLNGFCHGNRIS 162
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
EA +L D+M G +P+ TF +L+ G + A+ + ++M+ GC PD+VT+ ++I
Sbjct: 163 EAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVI 222
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
G C+ G+ + L+L ++M I A + ++ +I LCK + +A DL +++ I
Sbjct: 223 NGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIK 282
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVI 486
P YN +I C G +A+ ++ +M EK PD F LI +G+ +A +
Sbjct: 283 PDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKL 342
Query: 487 FYKMLATG-CSPDEITVRIL 505
+ +M+ + C PD + L
Sbjct: 343 YDEMVKSKHCFPDVVAYNTL 362
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 99/190 (52%), Gaps = 1/190 (0%)
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+D A+G++ M+ P +V F+ L+ ++ K + + L +M IS +L+T+S+
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEK 459
I+Y C+ ++L A +L ++ + P N +++G+C + EA A+V +M E
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
+PD TFT L+ G +A +A+ + +M+ GC PD +T + + L K G P A
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 520 RIKESLHENQ 529
+ + + +
Sbjct: 236 NLLNKMEKGK 245
>AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:42114-44303 REVERSE
LENGTH=729
Length = 729
Score = 196 bits (497), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 130/518 (25%), Positives = 244/518 (47%), Gaps = 21/518 (4%)
Query: 12 MTLSLFTRIQASKIALARCFTLTQLTYASCDKGSITKPEAWFVKIVST-LFLHSNSLDTR 70
+ ++ I S + + +TL + A C G + K + ++ ++ + +T
Sbjct: 218 LAWGVYQEISRSGVGI-NVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTL 276
Query: 71 VLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLH 130
+ +Y K L +E L N + G F +TYN ++ LC+ G +
Sbjct: 277 ISAYSSKGL-----MEEAFELMNAMPGKGF----------SPGVYTYNTVINGLCKHGKY 321
Query: 131 SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNL 190
AK ++ M G PDS L+ + ++++ ++ + V + V + ++
Sbjct: 322 ERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSM 381
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
+S+ + LD A+ F + + + + +L+ G C G + A N M GC
Sbjct: 382 MSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGC 441
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
+ D+VTYNT+LHGLC+ K + A L E+ ++ F P+ + T +I G+CKL ++ A
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALF-PDSYTLTILIDGHCKLGNLQNAM 500
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
LF +M + + T+N+L+DGF KVG++D+A I+ M+ P ++++ L+
Sbjct: 501 ELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNAL 560
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
C G + +W EM ++NI ++ + +I C+S + L ++ VP
Sbjct: 561 CSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDC 620
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEEK---CKPDKFTFTILIAGHCMKGRAPDAIVIF 487
YN +I G+ + N+ +A +V +MEE+ PD FT+ ++ G C + + +A V+
Sbjct: 621 ISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVL 680
Query: 488 YKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
KM+ G +PD T + + + EA RI + +
Sbjct: 681 RKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEM 718
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 202/411 (49%), Gaps = 2/411 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+++L+R+ Q A + +R G L+ S + ++++ + E
Sbjct: 167 VFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEI 226
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V +N + +++ L K K++ ++ + + T+N L+ S G +
Sbjct: 227 SRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLM 286
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+EAF+ +N M G SP + TYNT+++GLC+ + +RA+++ E+ L+S SP+ +Y +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEM-LRSGLSPDSTTYRS 345
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ CK + E +F +M P+ F+S++ F + GN+D AL + + G
Sbjct: 346 LLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAG 405
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD V +T LI+GYCR G ++ ++L +EM + + + T++ ++ LCK L EA
Sbjct: 406 LIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEAD 465
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
L ++ + P +IDG+CK GN+ A + +M+EK + D T+ L+ G
Sbjct: 466 KLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGF 525
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
G A I+ M++ P I+ IL + L G EA R+ + +
Sbjct: 526 GKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEM 576
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 120/456 (26%), Positives = 206/456 (45%), Gaps = 24/456 (5%)
Query: 78 HLTPSLVLEVVKRLNNPI-LGFKFF-QFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAK- 134
L P V+EV+ R N + LG +F Q N H+ + + ++ L + G S A+
Sbjct: 75 RLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHILVRSGRLSDAQS 134
Query: 135 LLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVL 194
L +R G VS +V+ LD + + C N V+D L+
Sbjct: 135 CLLRMIRRSG-----------VSRLEIVNSLDSTF-----SNCGS---NDSVFDLLIRTY 175
Query: 195 VKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDI 254
V+ KL +A F L + N L+G L G V+ A+ + G ++
Sbjct: 176 VQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINV 235
Query: 255 VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFD 314
T N +++ LC+ ++++ L +V K + P++ +Y T+IS Y M+EA L +
Sbjct: 236 YTLNIMVNALCKDGKMEKVGTFLSQVQEKGVY-PDIVTYNTLISAYSSKGLMEEAFELMN 294
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
M G P +T+N++I+G K G + A ++ +ML G PD T+ SL+ C+ G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
V ++ +M +R++ L FS ++S +S L +A +K ++P IY
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414
Query: 435 HVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
+I GYC+ G + A + EM ++ C D T+ ++ G C + +A +F +M
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
PD T+ IL K G A + + + E +
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKR 510
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 184/388 (47%), Gaps = 7/388 (1%)
Query: 82 SLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMR 141
SL++E K+ + + K F R + +V ++ ++ + G A + ++ ++
Sbjct: 345 SLLMEACKK-GDVVETEKVFSDMRSR-DVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVK 402
Query: 142 FDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLD 201
G +PD+ + L+ + + V+ L E ++ V Y+ +L L K L
Sbjct: 403 EAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLG 462
Query: 202 DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
+A LF E+ ++ T +L+ G C G++ A + M+ D+VTYNTLL
Sbjct: 463 EADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLL 522
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
G ++ ++D A+++ ++ + + P SY+ +++ C + EA ++DEM
Sbjct: 523 DGFGKVGDIDTAKEIWADM-VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNI 581
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
KP NS+I G+ + GN +KM+ G PD +++ +LI G+ R ++
Sbjct: 582 KPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFG 641
Query: 382 LWHEMNTRN--ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
L +M + + T++ ++ C+ N+++EA +LR++ + P S Y +I+G
Sbjct: 642 LVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMING 701
Query: 440 YCKSGNVDEANAIVVEMEEK--CKPDKF 465
+ N+ EA I EM ++ DKF
Sbjct: 702 FVSQDNLTEAFRIHDEMLQRGFSPDDKF 729
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/390 (24%), Positives = 170/390 (43%), Gaps = 36/390 (9%)
Query: 32 TLTQLTYASCDKGSITKPEAWFVKIVS--------------TLFLHSNSLDTRVLSYFGK 77
T L +C KG + + E F + S +LF S +LD + L YF
Sbjct: 342 TYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD-KALMYFNS 400
Query: 78 ----HLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFW---------TYNMLLRSL 124
L P V+ + I G+ +N+ + TYN +L L
Sbjct: 401 VKEAGLIPDNVIYTI-----LIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGL 455
Query: 125 CQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNA 184
C++ + A L++ M PDS L L+ + L + EL + + +++++
Sbjct: 456 CKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDV 515
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V Y+ LL K +D A ++ +++ ++++L+ LCS G + EAF+ +
Sbjct: 516 VTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDE 575
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M S P ++ N+++ G CR L+++ + F P+ SY T+I G+ +
Sbjct: 576 MISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKM-ISEGFVPDCISYNTLIYGFVREE 634
Query: 305 KMKEASSLFDEMD--RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
M +A L +M+ + G P+ FT+NS++ GF + M A + +KM+ G PD T
Sbjct: 635 NMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRST 694
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
+T +I G+ + + EM R S
Sbjct: 695 YTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724
>AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:3190594-3192414 REVERSE
LENGTH=606
Length = 606
Score = 195 bits (495), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 204/385 (52%), Gaps = 4/385 (1%)
Query: 148 DSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLF 207
+S + LV ++A R ++ E + +++A+ L+ L+K N+ D ++
Sbjct: 152 NSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVY 211
Query: 208 RELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI 267
+E++R TFNV++ LC G +++A + M+ +GCSP++V+YNTL+ G C++
Sbjct: 212 KEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKL 271
Query: 268 K---EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN 324
++ +A +LKE+ +++ SPN+ ++ +I G+ K + + +F EM KPN
Sbjct: 272 GGNGKMYKADAVLKEM-VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330
Query: 325 AFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH 384
++NSLI+G G + A+ + KM+ G P+++T+ +LI G+C+ + LD++
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390
Query: 385 EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
+ + + +++LI CK ++ + L +++R IVP YN +I G C++G
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450
Query: 445 NVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRI 504
N++ A + ++ K PD TF IL+ G+C KG + A ++ +M G P +T I
Sbjct: 451 NIEAAKKLFDQLTSKGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 505 LSSCLLKSGMPGEAARIKESLHENQ 529
+ K G A ++ + + +
Sbjct: 511 VMKGYCKEGNLKAATNMRTQMEKER 535
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 214/418 (51%), Gaps = 13/418 (3%)
Query: 74 YFGKHLTP----SLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGL 129
Y+G L+ L++ ++K + + + + + R K + + +T+N+++ +LC+ G
Sbjct: 181 YYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRK--IQPNVFTFNVVINALCKTGK 238
Query: 130 HSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVD---RLDVSKELLAEAQCNKVQVNAVV 186
+ A+ + + M+ G P+ L+ + + ++ + +L E N V N
Sbjct: 239 MNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTT 298
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
++ L+ K + L ++ +F+E++ ++N L+ GLC+ G + EA + M
Sbjct: 299 FNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMV 358
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
S G P+++TYN L++G C+ + A D+ V + P R Y +I YCKL K+
Sbjct: 359 SAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAV-PTTRMYNMLIDAYCKLGKI 417
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+ +L +EM+R G P+ T+N LI G + GN+++A ++ ++ G P D+VTF L
Sbjct: 418 DDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGLP-DLVTFHIL 476
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL-KRTD 425
+EGYCR G+ L EM+ + T+++++ CK L+ A ++ Q+ K
Sbjct: 477 MEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERR 536
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPD 482
+ + YN ++ GY + G +++AN ++ EM EK P++ T+ I+ +G PD
Sbjct: 537 LRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594
>AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:1303884-1305692 REVERSE
LENGTH=602
Length = 602
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 202/412 (49%), Gaps = 2/412 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ YN L+ C+ A + D MR PD+ ++ S +LD++ ++L +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ Q + Y L+ + +D+A+ L E++ + T+N ++ G+C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
VD AF+ + + GC PD+++YN LL L + + L+ ++ K PNV +Y+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM-FSEKCDPNVVTYS 337
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I+ C+ K++EA +L M G P+A++++ LI F + G +D A+ + M+
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
GC PD+V + +++ C+ GK + L+++ ++ S + +++ + S L S A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAG 473
++ ++ I P YN +I C+ G VDEA ++V+M + P T+ I++ G
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLG 517
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
C R DAI + M+ GC P+E T +L + +G EA + L
Sbjct: 518 FCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDL 569
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 188/395 (47%), Gaps = 3/395 (0%)
Query: 125 CQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNA 184
C+ G + + L + M G PD L L+ F + + + ++ E Q +
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDV 158
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
Y+ L++ K N++DDA + + +T T+N+++G LCS G +D A K LN
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
+ S C P ++TY L+ VD A L+ E+ L P++ +Y T+I G CK
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM-LSRGLKPDMFTYNTIIRGMCKEG 277
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ A + ++ G +P+ ++N L+ + G + + KM C P+VVT++
Sbjct: 278 MVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYS 337
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
LI CR GK+ ++L M + ++ +++ LI+ C+ RL A + L +
Sbjct: 338 ILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISD 397
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDA 483
+P YN V+ CK+G D+A I ++ E C P+ ++ + + G A
Sbjct: 398 GCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRA 457
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+ + +M++ G PDEIT + SCL + GM EA
Sbjct: 458 LHMILEMMSNGIDPDEITYNSMISCLCREGMVDEA 492
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 152/318 (47%), Gaps = 1/318 (0%)
Query: 114 FWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
+TYN ++R +C++G+ A + + G PD L+ + + + ++L+
Sbjct: 263 MFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 322
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ K N V Y L++ L + K+++A+ L + + + +++ L+ C G
Sbjct: 323 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 382
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
+D A +FL M S GC PDIV YNT+L LC+ + D+A ++ ++G + SPN SY
Sbjct: 383 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG-EVGCSPNSSSY 441
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
T+ S A + EM +G P+ T+NS+I + G +D A + M
Sbjct: 442 NTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRS 501
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
P VVT+ ++ G+C+ ++ +++ M + T++VLI + + E
Sbjct: 502 CEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAE 561
Query: 414 ARDLLRQLKRTDIVPQPS 431
A +L L R D + + S
Sbjct: 562 AMELANDLVRIDAISEYS 579
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 2/232 (0%)
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
C+ E+ L + M R G P+ LI GF + N+ A+ + + + G PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
+ +LI G+C++ +++ + M +++ S T++++I LC +L A +L Q
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGR 479
L + P Y +I+ G VDEA ++ EM + KPD FT+ +I G C +G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGD 531
A + + GC PD I+ IL LL G E ++ + + D
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCD 330
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 191 bits (486), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 111/386 (28%), Positives = 191/386 (49%), Gaps = 2/386 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
++L + H +TYN+L+ C++ S A L M G P L L++ + R+
Sbjct: 112 QRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + + + + L+ L HNK +A+ L +++ T+ V+
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC GD D A LN M + D+V +NT++ LC+ + VD A +L KE+ K
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG- 290
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PNV +Y+++IS C + +AS L +M PN TFN+LID FVK G A
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+Y M+ PD+ T+ SL+ G+C +++ ++ M +++ + T++ LI
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDK 464
CKS R+++ +L R++ +V Y +I G G+ D A + +M + PD
Sbjct: 411 CKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDI 470
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKM 490
T++IL+ G C G+ A+ +F M
Sbjct: 471 MTYSILLDGLCNNGKLEKALEVFDYM 496
Score = 178 bits (452), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/395 (26%), Positives = 195/395 (49%), Gaps = 2/395 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +++ LC++G A L + M D + ++ S +D + L E
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ N V Y +L+S L + + DA L +++ + TFN L+ G
Sbjct: 287 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 346
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA K + M PDI TYN+L++G C +D+A+ + + + K F P+V +Y T
Sbjct: 347 VEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCF-PDVVTYNT 405
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+CK ++++ + LF EM G + T+ +LI G G+ D+A ++K+M+ G
Sbjct: 406 LIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDG 465
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PPD++T++ L++G C GK+ L+++ M I ++ ++ +I +CK+ ++ +
Sbjct: 466 VPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGW 525
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGH 474
DL L + P YN +I G C + EA A++ +M+E P+ T+ LI H
Sbjct: 526 DLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAH 585
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
G + + +M + D T+ ++++ L
Sbjct: 586 LRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 109/405 (26%), Positives = 188/405 (46%), Gaps = 6/405 (1%)
Query: 122 RSLCQKGLHS----SAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
R + + GLH A L+ M LP L+S+ A + + DV L + Q
Sbjct: 54 REILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQR 113
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
++ Y+ L++ + +++ A+ L ++M+ T + L+ G C + +
Sbjct: 114 LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISD 173
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A ++ M G PD +T+ TL+HGL + A L+ + ++ PN+ +Y V+
Sbjct: 174 AVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVV 232
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
+G CK A +L ++M+ + + + FN++ID K ++D AL ++K+M G
Sbjct: 233 NGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIR 292
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
P+VVT++SLI C G+ + L +M + I+ +L TF+ LI K + EA L
Sbjct: 293 PNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKL 352
Query: 418 LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCM 476
+ + I P YN +++G+C +D+A + M K C PD T+ LI G C
Sbjct: 353 YDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCK 412
Query: 477 KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
R D +F +M G D +T L L G A ++
Sbjct: 413 SKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 457
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 120/245 (48%), Gaps = 1/245 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K ++ +TYN L+ C AK +++ M PD L+ F R++
Sbjct: 358 KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE 417
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
EL E + + V Y L+ L D+A +F++++ + T+++L+
Sbjct: 418 DGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILL 477
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC+ G +++A + + M+ DI Y T++ G+C+ +VD DL + LK
Sbjct: 478 DGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKG-V 536
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
PNV +Y T+ISG C ++EA +L +M G PN+ T+N+LI ++ G+ ++
Sbjct: 537 KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAE 596
Query: 347 IYKKM 351
+ ++M
Sbjct: 597 LIREM 601
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 1/249 (0%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+KS+ P++ + ++S K+ K SL ++M R +T+N LI+ F + +
Sbjct: 77 VKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQI 136
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
AL + KM+ G P +VT +SL+ GYC +++ + L +M TF+ L
Sbjct: 137 SLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTL 196
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KC 460
I L N+ EA L+ ++ + P Y V++G CK G+ D A ++ +ME K
Sbjct: 197 IHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKI 256
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR 520
+ D F +I C DA+ +F +M G P+ +T L SCL G +A++
Sbjct: 257 EADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQ 316
Query: 521 IKESLHENQ 529
+ + E +
Sbjct: 317 LLSDMIEKK 325
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 197/384 (51%), Gaps = 2/384 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN+++ +CQ G A L M G PD +V+ + LD +L+
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ N+ +Y +++ +L + KL +A F E++R +T + L+ G C GD+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
A KF M S +PD++TY ++ G C+I ++ A L E+ K P+ ++T
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTE 426
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+GYCK MK+A + + M ++G PN T+ +LIDG K G++DSA + +M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P++ T+ S++ G C+ G + + L E ++A T++ L+ CKS + +A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
++L+++ + P +N +++G+C G +++ ++ M K P+ TF L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 475 CMKGRAPDAIVIFYKMLATGCSPD 498
C++ A I+ M + G PD
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPD 630
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 202/415 (48%), Gaps = 2/415 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ Y ++ LC+ + A+ + M G LPD+ + L+ F + + + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + Y ++S + + +A LF E+ ++ TF L+ G C AG
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ +AF+ N M GCSP++VTY TL+ GLC+ ++D A +LL E+ K PN+ +Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYN 495
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++++G CK ++EA L E + +G + T+ +L+D + K G MD A I K+ML
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G P +VTF L+ G+C G + G L + M + I+ + TF+ L+ C N L+ A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAG 473
+ + + + P Y +++ G+CK+ N+ EA + EM+ K T+++LI G
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+ + +A +F +M G + D+ S K P + + EN
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 5/335 (1%)
Query: 203 AICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH 262
AI +FRE +++N+++ +C G + EA L M G +PD+++Y+T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
G CR E+D+ L+ EV + PN Y ++I C++ K+ EA F EM R G
Sbjct: 290 GYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P+ + +LIDGF K G++ +A + +M PDV+T+T++I G+C++G + L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
+HEM + + TF+ LI+ CK+ +++A + + + P Y +IDG CK
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 443 SGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
G++D AN ++ EM + +P+ FT+ ++ G C G +A+ + + A G + D +T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 502 VRILSSCLLKSGMPGEAARIKESLHENQGDSLKKS 536
L KS GE + +E L E G L+ +
Sbjct: 529 YTTLMDAYCKS---GEMDKAQEILKEMLGKGLQPT 560
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 3/230 (1%)
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y T +S C K A +F E G N ++N +I ++G + A + M
Sbjct: 216 YLTRLSKDC--YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G PDV+++++++ GYCR G+++ L M + + + + + +I LC+ +L
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
EA + ++ R I+P +Y +IDG+CK G++ A+ EM + PD T+T +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+G C G +A +F++M G PD +T L + K+G +A R+
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 197/384 (51%), Gaps = 2/384 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN+++ +CQ G A L M G PD +V+ + LD +L+
Sbjct: 248 SYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM 307
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ N+ +Y +++ +L + KL +A F E++R +T + L+ G C GD+
Sbjct: 308 KRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDI 367
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
A KF M S +PD++TY ++ G C+I ++ A L E+ K P+ ++T
Sbjct: 368 RAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKG-LEPDSVTFTE 426
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+GYCK MK+A + + M ++G PN T+ +LIDG K G++DSA + +M G
Sbjct: 427 LINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIG 486
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P++ T+ S++ G C+ G + + L E ++A T++ L+ CKS + +A+
Sbjct: 487 LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQ 546
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
++L+++ + P +N +++G+C G +++ ++ M K P+ TF L+ +
Sbjct: 547 EILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQY 606
Query: 475 CMKGRAPDAIVIFYKMLATGCSPD 498
C++ A I+ M + G PD
Sbjct: 607 CIRNNLKAATAIYKDMCSRGVGPD 630
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/415 (27%), Positives = 202/415 (48%), Gaps = 2/415 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ Y ++ LC+ + A+ + M G LPD+ + L+ F + + + E
Sbjct: 317 YIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYE 376
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + Y ++S + + +A LF E+ ++ TF L+ G C AG
Sbjct: 377 MHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGH 436
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ +AF+ N M GCSP++VTY TL+ GLC+ ++D A +LL E+ K PN+ +Y
Sbjct: 437 MKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM-WKIGLQPNIFTYN 495
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++++G CK ++EA L E + +G + T+ +L+D + K G MD A I K+ML
Sbjct: 496 SIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGK 555
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G P +VTF L+ G+C G + G L + M + I+ + TF+ L+ C N L+ A
Sbjct: 556 GLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAA 615
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAG 473
+ + + + P Y +++ G+CK+ N+ EA + EM+ K T+++LI G
Sbjct: 616 TAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKG 675
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+ + +A +F +M G + D+ S K P + + EN
Sbjct: 676 FLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIEN 730
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/335 (30%), Positives = 177/335 (52%), Gaps = 5/335 (1%)
Query: 203 AICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH 262
AI +FRE +++N+++ +C G + EA L M G +PD+++Y+T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
G CR E+D+ L+ EV + PN Y ++I C++ K+ EA F EM R G
Sbjct: 290 GYCRFGELDKVWKLI-EVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGIL 348
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P+ + +LIDGF K G++ +A + +M PDV+T+T++I G+C++G + L
Sbjct: 349 PDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKL 408
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
+HEM + + TF+ LI+ CK+ +++A + + + P Y +IDG CK
Sbjct: 409 FHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 443 SGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
G++D AN ++ EM + +P+ FT+ ++ G C G +A+ + + A G + D +T
Sbjct: 469 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVT 528
Query: 502 VRILSSCLLKSGMPGEAARIKESLHENQGDSLKKS 536
L KS GE + +E L E G L+ +
Sbjct: 529 YTTLMDAYCKS---GEMDKAQEILKEMLGKGLQPT 560
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 115/230 (50%), Gaps = 3/230 (1%)
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y T +S C K A +F E G N ++N +I ++G + A + M
Sbjct: 216 YLTRLSKDC--YKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLME 273
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G PDV+++++++ GYCR G+++ L M + + + + + +I LC+ +L
Sbjct: 274 LKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLA 333
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
EA + ++ R I+P +Y +IDG+CK G++ A+ EM + PD T+T +I
Sbjct: 334 EAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAII 393
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+G C G +A +F++M G PD +T L + K+G +A R+
Sbjct: 394 SGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
>AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10868400-10870382 REVERSE
LENGTH=660
Length = 660
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/412 (29%), Positives = 201/412 (48%), Gaps = 8/412 (1%)
Query: 97 GFKFFQF---TREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLG 153
G +F+ + + +N+ + ++N+++++LC+ A ++ M LPD
Sbjct: 167 GLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYC 226
Query: 154 FLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRS 213
L+ +R+D + LL E Q + V+Y+ L+ L K L L +
Sbjct: 227 TLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLK 286
Query: 214 HSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
T+N L+ GLC G +D+A L M S C P+ VTY TL++GL + + A
Sbjct: 287 GCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDA 346
Query: 274 RDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
LL + + + N Y+ +ISG K K +EA SL+ +M G KPN ++ L+D
Sbjct: 347 VRLLSSMEERG-YHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVD 405
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
G + G + A I +M+ GC P+ T++SL++G+ + G + +W EM+ S
Sbjct: 406 GLCREGKPNEAKEILNRMIASGCLPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSR 465
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
+ +SVLI LC R++EA + ++ I P Y+ +I G C G++D A +
Sbjct: 466 NKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLY 525
Query: 454 VEM----EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
EM E K +PD T+ IL+ G CM+ A+ + ML GC PD IT
Sbjct: 526 HEMLCQEEPKSQPDVVTYNILLDGLCMQKDISRAVDLLNSMLDRGCDPDVIT 577
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 203/419 (48%), Gaps = 19/419 (4%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA---LVDR-LDVSKEL 171
T + ++ S G S + L +R + ++ R + ++ L D+ +D+ +
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS----TFNVLMG 227
+ E +C + + ++++L+V++ + + ++ S+ ++ S +FN+++
Sbjct: 139 VDEFRCKR---SVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIK 195
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
LC VD A + GM C PD TY TL+ GLC+ + +D A LL E+ + S
Sbjct: 196 ALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG-CS 254
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+ Y +I G CK + + L D M G PN T+N+LI G G +D A+ +
Sbjct: 255 PSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSL 314
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
++M+ C P+ VT+ +LI G + + + L M R + H +SVLIS L K
Sbjct: 315 LERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFK 374
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFT 466
+ +EA L R++ P +Y+ ++DG C+ G +EA I+ M C P+ +T
Sbjct: 375 EGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYT 434
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
++ L+ G G +A+ ++ +M TGCS ++ +L L G R+KE++
Sbjct: 435 YSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVG------RVKEAM 487
Score = 155 bits (393), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 194/392 (49%), Gaps = 14/392 (3%)
Query: 145 KLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKL---D 201
KL DS L ++ S+A D ++LL+ +++ ++ + + V + K D
Sbjct: 74 KLGDSTL-SSMIESYANSGDFDSVEKLLSRI---RLENRVIIERSFIVVFRAYGKAHLPD 129
Query: 202 DAICLFRELMRS-HSHLETSTFNVLMGGLCSAGDVDEAFKF----LNGMRSFGCSPDIVT 256
A+ LF ++ +FN ++ + + G +F +N + SP+ ++
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
+N ++ LC+++ VDRA ++ + + + K P+ +Y T++ G CK ++ EA L DEM
Sbjct: 190 FNLVIKALCKLRFVDRAIEVFRGMP-ERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEM 248
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
G P+ +N LIDG K G++ + M GC P+ VT+ +LI G C GK+
Sbjct: 249 QSEGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 308
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ + L M + + T+ LI+ L K R +A LL ++ IY+ +
Sbjct: 309 DKAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVL 368
Query: 437 IDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I G K G +EA ++ +M EK CKP+ +++L+ G C +G+ +A I +M+A+GC
Sbjct: 369 ISGLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGC 428
Query: 496 SPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
P+ T L K+G+ EA ++ + + +
Sbjct: 429 LPNAYTYSSLMKGFFKTGLCEEAVQVWKEMDK 460
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 163/406 (40%), Gaps = 88/406 (21%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN+L+ LC+KG + L D M G +P+ L+ L +LD + LL
Sbjct: 260 YNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMV 319
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+K N V Y L++ LVK + DA+ L + HL ++VL+ GL G +
Sbjct: 320 SSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAE 379
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA M GC P+IV Y+ L+ GLCR + + A+++L + + S PN +Y+++
Sbjct: 380 EAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRM-IASGCLPNAYTYSSL 438
Query: 297 ISGYCKLSKMKEASSLFDEMDRS-----------------------------------GT 321
+ G+ K +EA ++ EMD++ G
Sbjct: 439 MKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGI 498
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH--------------------------- 354
KP+ ++S+I G +G+MD+AL +Y +ML
Sbjct: 499 KPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDISR 558
Query: 355 -----------GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
GC PDV+T + + L + N+ + S L+
Sbjct: 559 AVDLLNSMLDRGCDPDVITCNTFLN------------TLSEKSNSCDKGRSF--LEELVV 604
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
L K R+ A ++ + + P+ S + ++ CK ++ A
Sbjct: 605 RLLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 8/289 (2%)
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
T ++++ + D LL + L+++ RS+ V Y K +A LF
Sbjct: 79 TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIE-RSFIVVFRAYGKAHLPDKAVDLFHR 137
Query: 316 M-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM----LFHGCPPDVVTFTSLIEGY 370
M D K + +FNS+++ + G L Y + + P+ ++F +I+
Sbjct: 138 MVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKAL 197
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
C++ V+ ++++ M R +T+ L+ LCK R+ EA LL +++ P P
Sbjct: 198 CKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSP 257
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYK 489
IYN +IDG CK G++ +V M K C P++ T+ LI G C+KG+ A+ + +
Sbjct: 258 VIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLER 317
Query: 490 MLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
M+++ C P+++T L + L+K +A R+ S+ E +G L + Y
Sbjct: 318 MVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEE-RGYHLNQHIY 365
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 92/218 (42%), Gaps = 23/218 (10%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TY+ L++ + GL A ++ M G + L+ V R+ + + ++
Sbjct: 433 YTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSK 492
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM---RSHSHLETSTFNVLMGGLCS 231
++ + V Y +++ L +D A+ L+ E++ S + T+N+L+ GLC
Sbjct: 493 MLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCM 552
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC-RIKEVDRARDLLK------------ 278
D+ A LN M GC PD++T NT L+ L + D+ R L+
Sbjct: 553 QKDISRAVDLLNSMLDRGCDPDVITCNTFLNTLSEKSNSCDKGRSFLEELVVRLLKRQRV 612
Query: 279 -------EVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
EV L +P ++ ++ CK K+ A
Sbjct: 613 SGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAA 650
>AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2321740-2324382 REVERSE
LENGTH=880
Length = 880
Score = 190 bits (482), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 136/478 (28%), Positives = 228/478 (47%), Gaps = 19/478 (3%)
Query: 39 ASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGF 98
A C G E + KI+ F+ LD+ H+ SL+L + LN
Sbjct: 204 ALCKNGYTEAAEMFMSKILKIGFV----LDS--------HIGTSLLLGFCRGLNLRD-AL 250
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K F +++ + +Y++L+ LC+ G A L D M G P +R L+
Sbjct: 251 KVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIK- 309
Query: 159 FALVDR--LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
AL DR +D + L E + N Y L+ L + K+++A + R++++
Sbjct: 310 -ALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
T+N L+ G C G V AF+ L M C P++ T+N L+ GLCR+ + +A L
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
LK + L + SP++ SY +I G C+ M A L M+ +P+ TF ++I+ F
Sbjct: 429 LKRM-LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFC 487
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
K G D A ML G D VT T+LI+G C+VGK L + + I + H
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPH 547
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+ +V++ L K +++E +L ++ + +VP Y ++DG +SG++ + I+ M
Sbjct: 548 SLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELM 607
Query: 457 E-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+ C P+ + +TI+I G C GR +A + M +G SP+ +T ++ + +G
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNG 665
Score = 175 bits (443), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 126/453 (27%), Positives = 204/453 (45%), Gaps = 46/453 (10%)
Query: 117 YNMLLRSLCQKGLHSSA-----KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
Y ++ +LC+ G +A K+L D + S LLGF L D L V +
Sbjct: 198 YRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGF-CRGLNLRDALKVFDVM 256
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
E C N+V Y L+ L + +L++A L ++ T T+ VL+ LC
Sbjct: 257 SKEVTCAP---NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G +D+AF + M GC P++ TY L+ GLCR +++ A + +++ +K + P+V
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKM-VKDRIFPSVI 372
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y +I+GYCK ++ A L M++ KPN TFN L++G +VG A+ + K+M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
L +G PD+V++ LI+G CR G +N L MN +I TF+ +I+ CK +
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA-------------------NAI 452
A L + R I +IDG CK G +A N I
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552
Query: 453 VVEMEEKCK-----------------PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
+ + + CK P T+T L+ G G + I M +GC
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612
Query: 496 SPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
P+ I+ + L + G EA ++ ++ ++
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDS 645
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 136/502 (27%), Positives = 237/502 (47%), Gaps = 42/502 (8%)
Query: 57 VSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVV--KRLNNPILGFKFFQFTREKLNVHHSF 114
V++L N L H+ P++ +V+ +R +N I +FF + HS
Sbjct: 45 VASLLKTPNWEKNSSLKSLVSHMNPNVASQVISLQRSDNDIC-VRFFMWV-----CKHSS 98
Query: 115 WTY-----NMLLRSLCQKGLHSSA-----KLLYDCMRFDGKLPD--------SRLLGF-- 154
+ + N LL+ + GL+ A L+ +C R + ++ + GF
Sbjct: 99 YCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECSRCEKEMLKLMYCFDELREVFGFRL 158
Query: 155 -------LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLF 207
L+ S A +D ++ + + V + Y +++ L K+ + A
Sbjct: 159 NYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFM 218
Query: 208 RELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM-RSFGCSPDIVTYNTLLHGLCR 266
++++ L++ L+ G C ++ +A K + M + C+P+ V+Y+ L+HGLC
Sbjct: 219 SKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCE 278
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
+ ++ A L ++G K P+ R+YT +I C + +A +LFDEM G KPN
Sbjct: 279 VGRLEEAFGLKDQMGEKG-CQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVH 337
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
T+ LIDG + G ++ A G+ +KM+ P V+T+ +LI GYC+ G+V +L M
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 387 NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNV 446
R ++ TF+ L+ LC+ + +A LL+++ + P YN +IDG C+ G++
Sbjct: 398 EKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHM 457
Query: 447 DEANAIVVEMEEKC---KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
+ A ++ M C +PD TFT +I C +G+A A ML G S DE+T
Sbjct: 458 NTAYKLLSSM--NCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGT 515
Query: 504 ILSSCLLKSGMPGEAARIKESL 525
L + K G +A I E+L
Sbjct: 516 TLIDGVCKVGKTRDALFILETL 537
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 155/284 (54%), Gaps = 3/284 (1%)
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M + G ++ Y T+++ LC+ + A + ++ LK F + T+++ G+C+
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKI-LKIGFVLDSHIGTSLLLGFCRGL 244
Query: 305 KMKEASSLFDEMDRSGT-KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTF 363
+++A +FD M + T PN+ +++ LI G +VG ++ A G+ +M GC P T+
Sbjct: 245 NLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
T LI+ C G ++ +L+ EM R ++HT++VLI LC+ +++EA + R++ +
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 424 TDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPD 482
I P YN +I+GYCK G V A ++ ME++ CKP+ TF L+ G C G+
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 483 AIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
A+ + +ML G SPD ++ +L L + G A ++ S++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 108/511 (21%), Positives = 204/511 (39%), Gaps = 100/511 (19%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K NVH TY +L+ LC+ G A + M D P L++ + R+
Sbjct: 333 KPNVH----TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVV 388
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ ELL + + N ++ L+ L + K A+ L + ++ + + ++NVL+
Sbjct: 389 PAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLI 448
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G ++ A+K L+ M F PD +T+ +++ C+ + D A L + L+
Sbjct: 449 DGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLG-LMLRKGI 507
Query: 287 SPNVRSYTTVISGYCKLSK-----------------------------------MKEASS 311
S + + TT+I G CK+ K +KE +
Sbjct: 508 SLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELA 567
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+ ++++ G P+ T+ +L+DG ++ G++ + I + M GC P+V +T +I G C
Sbjct: 568 MLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLC 627
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ G+V L M +S + T++V++ + +L A + +R +
Sbjct: 628 QFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDR 687
Query: 432 IYNHVIDGY--------------------------------------------------- 440
IY+ ++ G+
Sbjct: 688 IYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVT 747
Query: 441 --CKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
CK G DE+N +V + E+ + I++ +C K + + + +L +G P
Sbjct: 748 RLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPS 807
Query: 499 EITVRILSSCLLKSGM--PGEAARIKESLHE 527
S CL+ G+ G+A R +E + E
Sbjct: 808 -----FKSFCLVIQGLKKEGDAERARELVME 833
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 171/399 (42%), Gaps = 65/399 (16%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+YN+L+ LC++G ++++ KLL FD + PD ++++F + DV+ L
Sbjct: 443 SYNVLIDGLCREGHMNTAYKLLSSMNCFDIE-PDCLTFTAIINAFCKQGKADVASAFLGL 501
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ ++ V L+ + K K DA+ + L++ + NV++ L
Sbjct: 502 MLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCK 561
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
V E L + G P +VTY TL+ GL R ++ + +L+ + L S PNV YT
Sbjct: 562 VKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKL-SGCLPNVYPYT 620
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I+G C+ +++EA L M SG PN T+ ++ G+V G +D AL + M+
Sbjct: 621 IIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVER 680
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS---------------------- 392
G + ++SL++G+ K G+D E +I+
Sbjct: 681 GYELNDRIYSSLLQGFVLSQK---GIDNSEESTVSDIALRETDPECINELISVVEQLGGC 737
Query: 393 -ASLHTFSVLISYLCKSNRLQEARDLLRQL--------KRTDI----------------- 426
+ L F L++ LCK R E+ DL++ + K DI
Sbjct: 738 ISGLCIF--LVTRLCKEGRTDESNDLVQNVLERGVFLEKAMDIIMESYCSKKKHTKCMEL 795
Query: 427 ---------VPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
VP + VI G K G+ + A +V+E+
Sbjct: 796 ITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMEL 834
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/266 (21%), Positives = 114/266 (42%), Gaps = 24/266 (9%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL + S TY L+ L + G + + + + M+ G LP+ +++ R++
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+++LL+ Q + V N V Y ++ V + KLD A+ R ++ L ++ L+
Sbjct: 634 EAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLL 693
Query: 227 GG-LCSAGDVDEAFK--------------FLNGMRSF-----GCSPDIVTYNTLLHGLCR 266
G + S +D + + +N + S GC + + L+ LC+
Sbjct: 694 QGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIF--LVTRLCK 751
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
D + DL++ V + F ++ ++ YC K + L + +SG P+
Sbjct: 752 EGRTDESNDLVQNVLERGVFLE--KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFK 809
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKML 352
+F +I G K G+ + A + ++L
Sbjct: 810 SFCLVIQGLKKEGDAERARELVMELL 835
>AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:360918-363050 REVERSE
LENGTH=710
Length = 710
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 216/450 (48%), Gaps = 17/450 (3%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQ-KGLHSSAKLLY 137
++ + VL+ ++ + P G +FF + K H ++ ++L L + + L+ + L+
Sbjct: 66 ISRTTVLQTLRLIKVPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVARNFLF 124
Query: 138 DCMRFDG---KLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVL 194
R KL D R L+ S+ S +L + + + + +++LLS+L
Sbjct: 125 SIERRSNGCVKLQD-RYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLLSIL 183
Query: 195 VKHNKLDDAICLFRELMRSHSHLETS-TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
+K + A LF E+ R++ S TFN L+ G C VDEAF+ M + C+PD
Sbjct: 184 LKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPD 243
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLK-SKFSPNVRSYTTVISGYCKLSKMKEASSL 312
+VTYNT++ GLCR +V A ++L + K + PNV SYTT++ GYC ++ EA +
Sbjct: 244 VVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLV 303
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY--KKMLFHGCPPDVVTFTSLIEGY 370
F +M G KPNA T+N+LI G + D I F PD TF LI+ +
Sbjct: 304 FHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAH 363
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV--- 427
C G ++ + ++ EM + ++SVLI LC N A L +L +++
Sbjct: 364 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGK 423
Query: 428 ----PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDA 483
P + YN + + C +G +A + ++ ++ D ++ LI GHC +G+ A
Sbjct: 424 DECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQDPPSYKTLITGHCREGKFKPA 483
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+ ML PD T +L LLK G
Sbjct: 484 YELLVLMLRREFVPDLETYELLIDGLLKIG 513
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/396 (23%), Positives = 169/396 (42%), Gaps = 45/396 (11%)
Query: 105 REKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR 164
++ +VH + +Y L+R C K A L++ M G P++ L+ + R
Sbjct: 272 KKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHR 331
Query: 165 LDVSKELL--AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
D K++L +A ++ L+ LD A+ +F+E++ H +++++
Sbjct: 332 YDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASY 391
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRS----FG---CSPDIVTYNTLLHGLCRIKEVDRARD 275
+VL+ LC + D A N + G C P YN + LC + +A
Sbjct: 392 SVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEK 451
Query: 276 LLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
+ +++ + P SY T+I+G+C+ K K A L M R P+ T+ LIDG
Sbjct: 452 VFRQLMKRGVQDPP--SYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGL 509
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI----------EGYCRV-----GKVNYGL 380
+K+G A ++ML P TF S++ E +C V ++ +
Sbjct: 510 LKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNI 569
Query: 381 DLWHEMNTRNISAS-----------------LHTFSVLISYLCKSNRLQEARDL-LRQLK 422
DL ++ S++ L L+ YLC++ +L +A L L L+
Sbjct: 570 DLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLVLFCLE 629
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
++ +V + N VI+G CK EA ++ E+ E
Sbjct: 630 KSQMVDIDTC-NTVIEGLCKHKRHSEAFSLYNELVE 664
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 189 bits (479), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 129/471 (27%), Positives = 222/471 (47%), Gaps = 37/471 (7%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
G F+ K+++ T + LL L + A L++ M G PD + ++
Sbjct: 175 GVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVI 234
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
S + L +KE++A + VN V Y+ L+ L K K+ +A+ + ++L
Sbjct: 235 RSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLK 294
Query: 217 LETSTFNVLMGGLCSA-----------------------------------GDVDEAFKF 241
+ T+ L+ GLC G ++EA
Sbjct: 295 PDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNL 354
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
+ + FG SP++ YN L+ LC+ ++ A L +G K PN +Y+ +I +C
Sbjct: 355 VKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMG-KIGLRPNDVTYSILIDMFC 413
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
+ K+ A S EM +G K + + +NSLI+G K G++ +A G +M+ P VV
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVV 473
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
T+TSL+ GYC GK+N L L+HEM + I+ S++TF+ L+S L ++ +++A L ++
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRA 480
++ P YN +I+GYC+ G++ +A + EM EK PD +++ LI G C+ G+A
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGD 531
+A V + C +EI L + G EA + + + + D
Sbjct: 594 SEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 111/444 (25%), Positives = 195/444 (43%), Gaps = 47/444 (10%)
Query: 116 TYNMLLRSLC-----QKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKE 170
TY L+ LC + GL ++L C+RF P + LV +++ +
Sbjct: 299 TYCTLVYGLCKVQEFEIGLEMMDEML--CLRFS---PSEAAVSSLVEGLRKRGKIEEALN 353
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
L+ V N VY+ L+ L K K +A LF + + T+++L+ C
Sbjct: 354 LVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFC 413
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
G +D A FL M G + YN+L++G C+ ++ A + E+ + K P V
Sbjct: 414 RRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM-INKKLEPTV 472
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
+YT+++ GYC K+ +A L+ EM G P+ +TF +L+ G + G + A+ ++ +
Sbjct: 473 VTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNE 532
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
M P+ VT+ +IEGYC G ++ + EM + I +++ LI LC + +
Sbjct: 533 MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQ 592
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK----------- 459
EA+ + L + + Y ++ G+C+ G ++EA ++ EM ++
Sbjct: 593 ASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652
Query: 460 -------------------------CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
KPD +T +I G +A I+ M+ G
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 495 CSPDEITVRILSSCLLKSGMPGEA 518
C P+E+T + + L K+G EA
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEA 736
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 126/489 (25%), Positives = 214/489 (43%), Gaps = 15/489 (3%)
Query: 48 KPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQ----- 102
+P I+ +F LDT LS+ G+ + L L V N+ I G F
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDT-ALSFLGEMVDTGLKLSVYP-YNSLINGHCKFGDISAA 456
Query: 103 --FTREKLN--VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
F E +N + + TY L+ C KG + A LY M G P L+S
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
+ + +L E V+ N V Y+ ++ + + A +E+ +
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
T ++ L+ GLC G EA F++G+ C + + Y LLHG CR +++ A + +
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
E+ ++ ++ Y +I G K K L EM G KP+ + S+ID K
Sbjct: 637 EM-VQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKT 695
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
G+ A GI+ M+ GC P+ VT+T++I G C+ G VN L +M + + T+
Sbjct: 696 GDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTY 755
Query: 399 SVLISYLCKSN-RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM- 456
+ L K +Q+A +L + + ++ + YN +I G+C+ G ++EA+ ++ M
Sbjct: 756 GCFLDILTKGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 457 EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPG 516
+ PD T+T +I C + AI ++ M G PD + L +G G
Sbjct: 815 GDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMG 874
Query: 517 EAARIKESL 525
+A ++ +
Sbjct: 875 KATELRNEM 883
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 123/493 (24%), Positives = 196/493 (39%), Gaps = 76/493 (15%)
Query: 108 LNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDV 167
V + + YN L+ SLC+ A+LL+D M G P+ L+ F +LD
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+ L E ++++ Y++L++ K + A E++ T+ LMG
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
G CS G +++A + + M G +P I T+ TLL GL R + A L E+ +
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA-EWNVK 539
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
PN +Y +I GYC+ M +A EM G P+ +++ LI G G A
Sbjct: 540 PNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVF 599
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+ C + + +T L+ G+CR GK+ L + EM R + L + VLI K
Sbjct: 600 VDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLK 659
Query: 408 SNR-------LQEARDLLRQLKRTDI------------------------------VPQP 430
L+E D R LK D+ VP
Sbjct: 660 HKDRKLFFGLLKEMHD--RGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNE 717
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKF------------------------ 465
Y VI+G CK+G V+EA + +M+ P++
Sbjct: 718 VTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHN 777
Query: 466 -----------TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
T+ +LI G C +GR +A + +M+ G SPD IT + + L +
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 515 PGEAARIKESLHE 527
+A + S+ E
Sbjct: 838 VKKAIELWNSMTE 850
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 181/426 (42%), Gaps = 17/426 (3%)
Query: 32 TLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRL 91
T T L C KG I K + ++ S T +LS L+ + VK
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGL---FRAGLIRDAVKLF 530
Query: 92 NNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRL 151
N + NV + TYN+++ C++G S A M G +PD+
Sbjct: 531 NE-----------MAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYS 579
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
L+ L + +K + ++N + Y LL + KL++A+ + +E++
Sbjct: 580 YRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMV 639
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD 271
+ L+ + VL+ G D F L M G PD V Y +++ + +
Sbjct: 640 QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFK 699
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
A + ++ + PN +YT VI+G CK + EA L +M + PN T+
Sbjct: 700 EAFGIW-DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCF 758
Query: 332 IDGFVKVG-NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
+D K +M A+ ++ +L G + T+ LI G+CR G++ +L M
Sbjct: 759 LDILTKGEVDMQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDG 817
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
+S T++ +I+ LC+ N +++A +L + I P YN +I G C +G + +A
Sbjct: 818 VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKAT 877
Query: 451 AIVVEM 456
+ EM
Sbjct: 878 ELRNEM 883
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 118/258 (45%), Gaps = 1/258 (0%)
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
++ L+ R + V + K + K P VR+ + ++ G K A LF++M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
G +P+ + + +I ++ ++ A + M GC ++V + LI+G C+ KV
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ + ++ +++ + T+ L+ LCK + +++ ++ P + + +
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338
Query: 437 IDGYCKSGNVDEA-NAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
++G K G ++EA N + ++ P+ F + LI C + +A ++F +M G
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398
Query: 496 SPDEITVRILSSCLLKSG 513
P+++T IL + G
Sbjct: 399 RPNDVTYSILIDMFCRRG 416
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 36/224 (16%)
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
LL E ++ + V+Y +++ K +A ++ ++ T+ ++ GLC
Sbjct: 669 LLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLC 728
Query: 231 SAGDVDEAFKFLNGMR---------SFGCSPDIVT------------------------- 256
AG V+EA + M+ ++GC DI+T
Sbjct: 729 KAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTA 788
Query: 257 -YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
YN L+ G CR ++ A +L+ + + SP+ +YTT+I+ C+ + +K+A L++
Sbjct: 789 TYNMLIRGFCRQGRIEEASELITRM-IGDGVSPDCITYTTMINELCRRNDVKKAIELWNS 847
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
M G +P+ +N+LI G G M A + +ML G P+
Sbjct: 848 MTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 3/184 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL-LAE 174
TY ++ LC+ G + A++L M+ +P+ G + +D+ K + L
Sbjct: 719 TYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT-KGEVDMQKAVELHN 777
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
A + N Y+ L+ + ++++A L ++ + T+ ++ LC D
Sbjct: 778 AILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRND 837
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
V +A + N M G PD V YNTL+HG C E+ +A +L E+ L+ PN ++
Sbjct: 838 VKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEM-LRQGLIPNNKTSR 896
Query: 295 TVIS 298
T S
Sbjct: 897 TTTS 900
>AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:7056254-7057954 FORWARD
LENGTH=566
Length = 566
Score = 188 bits (477), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 206/415 (49%), Gaps = 36/415 (8%)
Query: 150 RLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRE 209
RL +++S+ L++S E N + ++ LL+ +V + + F E
Sbjct: 95 RLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE 154
Query: 210 LMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE 269
+S L+ +F +L+ G C AG+++++F L + FG SP++V Y TL+ G C+ E
Sbjct: 155 -NKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGE 213
Query: 270 VDRARDLLKEVGL-----------------------KSKFS-----------PNVRSYTT 295
+++A+DL E+G K F PN+ +Y
Sbjct: 214 IEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
V++ CK + K+A +FDEM G N T+N+LI G + ++ A + +M G
Sbjct: 274 VMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDG 333
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P+++T+ +LI+G+C VGK+ L L ++ +R +S SL T+++L+S C+ A
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAA 393
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGH 474
++++++ I P Y +ID + +S N+++A + + MEE PD T+++LI G
Sbjct: 394 KMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGF 453
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
C+KG+ +A +F M+ C P+E+ + K G A ++ + + E +
Sbjct: 454 CIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKE 508
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 190/378 (50%), Gaps = 8/378 (2%)
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
G L+ ++ S +LL E N V+Y L+ K +++ A LF E+
Sbjct: 166 FGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMG 225
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC---RIK 268
+ T+ VL+ GL G + F+ M+ G P++ TYN +++ LC R K
Sbjct: 226 KLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTK 285
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+ + D ++E G+ S N+ +Y T+I G C+ K+ EA+ + D+M G PN T+
Sbjct: 286 DAFQVFDEMRERGV----SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITY 341
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N+LIDGF VG + AL + + + G P +VT+ L+ G+CR G + + EM
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEE 401
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
R I S T+++LI +S+ +++A L ++ +VP Y+ +I G+C G ++E
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461
Query: 449 ANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
A+ + M EK C+P++ + +I G+C +G + A+ + +M +P+ + R +
Sbjct: 462 ASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIE 521
Query: 508 CLLKSGMPGEAARIKESL 525
L K EA R+ E +
Sbjct: 522 VLCKERKSKEAERLVEKM 539
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 115/409 (28%), Positives = 199/409 (48%), Gaps = 10/409 (2%)
Query: 103 FTREKLNVHHSFWTYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFAL 161
F K V +++ +L++ C+ G + S LL + F G P+ + L+
Sbjct: 152 FNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEF-GFSPNVVIYTTLIDGCCK 210
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
++ +K+L E + N Y L++ L K+ ++ ++ T
Sbjct: 211 KGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYT 270
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEVDRARDLLK 278
+N +M LC G +AF+ + MR G S +IVTYNTL+ GLCR + E ++ D +K
Sbjct: 271 YNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMK 330
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
G+ +PN+ +Y T+I G+C + K+ +A SL ++ G P+ T+N L+ GF +
Sbjct: 331 SDGI----NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRK 386
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
G+ A + K+M G P VT+T LI+ + R + + L M + +HT+
Sbjct: 387 GDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTY 446
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
SVLI C ++ EA L + + + P IYN +I GYCK G+ A ++ EMEE
Sbjct: 447 SVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEE 506
Query: 459 K-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILS 506
K P+ ++ +I C + ++ +A + KM+ +G P + ++S
Sbjct: 507 KELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLIS 555
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 165/371 (44%), Gaps = 21/371 (5%)
Query: 34 TQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNN 93
T L C KG I K + F ++ L L +N VL L VK+
Sbjct: 202 TTLIDGCCKKGEIEKAKDLFFEM-GKLGLVANERTYTVL-------INGLFKNGVKKQ-- 251
Query: 94 PILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLG 153
GF+ ++ +E V + +TYN ++ LC+ G A ++D MR G +
Sbjct: 252 ---GFEMYEKMQED-GVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 154 FLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRS 213
L+ +L+ + +++ + + + + N + Y+ L+ KL A+ L R+L
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 214 HSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
T+N+L+ G C GD A K + M G P VTY L+ R +++A
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKA 427
Query: 274 RDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
L ++E+GL P+V +Y+ +I G+C +M EAS LF M +PN +N+
Sbjct: 428 IQLRLSMEELGL----VPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNT 483
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
+I G+ K G+ AL + K+M P+V ++ +IE C+ K L +M
Sbjct: 484 MILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Query: 391 ISASLHTFSVL 401
I S S++
Sbjct: 544 IDPSTSILSLI 554
>AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5690020-5691543 FORWARD
LENGTH=507
Length = 507
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 186/345 (53%), Gaps = 2/345 (0%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V + +LL+ N+++DAI LF +++ T+ L+ LC ++ A + N
Sbjct: 154 VTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQ 213
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M + G P++VTYN L+ GLC I A LL+++ +K + PNV ++T +I + K+
Sbjct: 214 MGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM-MKRRIEPNVITFTALIDAFVKVG 272
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
K+ EA L++ M + P+ FT+ SLI+G G +D A ++ M +GC P+ V +T
Sbjct: 273 KLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYT 332
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+LI G+C+ +V G+ +++EM+ + + A+ T++VLI C R A+++ Q+
Sbjct: 333 TLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSR 392
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDA 483
P YN ++DG C +G V++A I M ++ + T+TI+I G C G+ DA
Sbjct: 393 RAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDA 452
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+F + + G P+ IT + S + G+ EA + + + E+
Sbjct: 453 FDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKED 497
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/346 (31%), Positives = 180/346 (52%), Gaps = 2/346 (0%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
+ LLSV+ K N+ D I LF ++ T N++M +C + A FL M
Sbjct: 86 FTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMM 145
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
G PD+VT+ +LL+G C ++ A L ++ L F PNV +YTT+I CK +
Sbjct: 146 KLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI-LGMGFKPNVVTYTTLIRCLCKNRHL 204
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
A LF++M +G++PN T+N+L+ G ++G A + + M+ P+V+TFT+L
Sbjct: 205 NHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTAL 264
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I+ + +VGK+ +L++ M ++ + T+ LI+ LC L EAR + ++R
Sbjct: 265 IDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGC 324
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIV 485
P IY +I G+CKS V++ I EM +K + T+T+LI G+C+ GR A
Sbjct: 325 YPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQE 384
Query: 486 IFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGD 531
+F +M + PD T +L L +G +A I E + + + D
Sbjct: 385 VFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMD 430
Score = 170 bits (430), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 207/417 (49%), Gaps = 3/417 (0%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
+L V+ ++N + F+ + L + T N+++ +C A M
Sbjct: 89 LLSVIAKMNRYDVVISLFE-QMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKL 147
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G PD L++ + +R++ + L + + N V Y L+ L K+ L+ A
Sbjct: 148 GFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHA 207
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ LF ++ + S T+N L+ GLC G +A L M P+++T+ L+
Sbjct: 208 VELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDA 267
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
++ ++ A++L V ++ P+V +Y ++I+G C + EA +F M+R+G P
Sbjct: 268 FVKVGKLMEAKELY-NVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYP 326
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
N + +LI GF K ++ + I+ +M G + +T+T LI+GYC VG+ + +++
Sbjct: 327 NEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVF 386
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
++M++R + T++VL+ LC + ++++A + +++ ++ Y +I G CK
Sbjct: 387 NQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKL 446
Query: 444 GNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
G V++A + + K KP+ T+T +I+G C +G +A +F KM G P+E
Sbjct: 447 GKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNE 503
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 164/318 (51%), Gaps = 1/318 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY L+R LC+ + A L++ M +G P+ LV+ + R + LL +
Sbjct: 190 TYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDM 249
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+++ N + + L+ VK KL +A L+ +++ + + T+ L+ GLC G +
Sbjct: 250 MKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLL 309
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA + M GC P+ V Y TL+HG C+ K V+ + E+ K + N +YT
Sbjct: 310 DEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA-NTITYTV 368
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I GYC + + A +F++M P+ T+N L+DG G ++ AL I++ M
Sbjct: 369 LIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKRE 428
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
++VT+T +I+G C++GKV DL+ + ++ + ++ T++ +IS C+ + EA
Sbjct: 429 MDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEAD 488
Query: 416 DLLRQLKRTDIVPQPSIY 433
L +++K +P S+Y
Sbjct: 489 SLFKKMKEDGFLPNESVY 506
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 140/297 (47%), Gaps = 41/297 (13%)
Query: 261 LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMD--- 317
LH L + + A DL + + S+ P++ +T ++S K+++ SLF++M
Sbjct: 59 LHNL----QFNDALDLFTRM-VHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG 113
Query: 318 --------------------------------RSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
+ G +P+ TF SL++G+ ++ A+
Sbjct: 114 IPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAI 173
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++ ++L G P+VVT+T+LI C+ +N+ ++L+++M T ++ T++ L++ L
Sbjct: 174 ALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGL 233
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCKPDK 464
C+ R +A LLR + + I P + +ID + K G + EA + V ++ PD
Sbjct: 234 CEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDV 293
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
FT+ LI G CM G +A +FY M GC P+E+ L KS + +I
Sbjct: 294 FTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKI 350
>AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23301576-23303162 FORWARD LENGTH=528
Length = 528
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 118/433 (27%), Positives = 215/433 (49%), Gaps = 3/433 (0%)
Query: 82 SLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMR 141
S +L + ++N L F + E L + H+ +TYN+L+ C+ S A L M
Sbjct: 82 SKLLSAIAKMNKFDLVISFGE-KMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMM 140
Query: 142 FDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLD 201
G PD L L++ F +R+ + L+ + + + V + L+ L HNK
Sbjct: 141 KLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKAS 200
Query: 202 DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
+A+ L +++ + T+ ++ GLC GD D A LN M + ++V Y+T++
Sbjct: 201 EAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVI 260
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
LC+ + D A +L E+ K PNV +Y+++IS C + +AS L +M
Sbjct: 261 DSLCKYRHEDDALNLFTEMENKG-VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
PN TF++LID FVK G + A +Y++M+ P++ T++SLI G+C + ++
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ M ++ ++ T++ LI+ CK+ R+ + +L R++ + +V Y +I G+
Sbjct: 380 MLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFF 439
Query: 442 KSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
++ + D A + +M P+ T+ IL+ G C G+ A+V+F + + PD
Sbjct: 440 QARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIY 499
Query: 501 TVRILSSCLLKSG 513
T I+ + K+G
Sbjct: 500 TYNIMIEGMCKAG 512
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 165/338 (48%), Gaps = 2/338 (0%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y +L + +LDDAI LF + +S F+ L+ + D F M
Sbjct: 46 YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
G S ++ TYN L++ CR + A LL ++ +K + P++ + ++++G+C +++
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKM-MKLGYEPDIVTLNSLLNGFCHGNRI 164
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+A +L D+M G KP+ TF +LI G A+ + +M+ GC PD+VT+ ++
Sbjct: 165 SDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAV 224
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
+ G C+ G + L+L ++M I A++ +S +I LCK +A +L +++ +
Sbjct: 225 VNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 284
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIV 485
P Y+ +I C G +A+ ++ +M E K P+ TF+ LI KG+ A
Sbjct: 285 RPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEK 344
Query: 486 IFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
++ +M+ P+ T L + GEA ++ E
Sbjct: 345 LYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLE 382
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 151/297 (50%), Gaps = 1/297 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY ++ LC++G A L + M + + ++ S D + L E
Sbjct: 220 TYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 279
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V+ N + Y +L+S L + + DA L +++ + TF+ L+ G +
Sbjct: 280 ENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKL 339
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+A K M P+I TY++L++G C + + A+ +L E+ ++ PNV +Y T
Sbjct: 340 VKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQML-ELMIRKDCLPNVVTYNT 398
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+G+CK ++ + LF EM + G N T+ +LI GF + + D+A ++K+M+ G
Sbjct: 399 LINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVG 458
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
P+++T+ L++G C+ GK+ + ++ + + ++T++++I +CK+ + +
Sbjct: 459 VHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWK 515
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 131/274 (47%), Gaps = 1/274 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E + + Y+ ++ SLC+ A L+ M G P+ L+S R
Sbjct: 245 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRW 304
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ LL++ K+ N V + L+ VK KL A L+ E+++ T++ L
Sbjct: 305 SDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSL 364
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G C + EA + L M C P++VTYNTL++G C+ K VD+ +L +E+ +
Sbjct: 365 INGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRG- 423
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
N +YTT+I G+ + A +F +M G PN T+N L+DG K G + A+
Sbjct: 424 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM 483
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
+++ + PD+ T+ +IEG C+ GK G
Sbjct: 484 VVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 150/306 (49%), Gaps = 9/306 (2%)
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
VL GL S ++D+A M P I+ ++ LL + ++ + D L+ G K
Sbjct: 49 VLRTGL-SDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFD----LVISFGEK 103
Query: 284 SKF---SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+ S N+ +Y +I+ +C+ S++ A +L +M + G +P+ T NSL++GF
Sbjct: 104 MEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNR 163
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ A+ + +M+ G PD VTFT+LI G K + + L M R L T+
Sbjct: 164 ISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGA 223
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK- 459
+++ LCK A +LL +++ I IY+ VID CK + D+A + EME K
Sbjct: 224 VVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 283
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
+P+ T++ LI+ C GR DA + M+ +P+ +T L +K G +A
Sbjct: 284 VRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAE 343
Query: 520 RIKESL 525
++ E +
Sbjct: 344 KLYEEM 349
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 128/262 (48%), Gaps = 2/262 (0%)
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
E+D A L V +S+ P++ ++ ++S K++K S ++M+ G N +T+
Sbjct: 58 ELDDAIGLFG-VMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTY 116
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N LI+ F + + AL + KM+ G PD+VT SL+ G+C +++ + L +M
Sbjct: 117 NILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVE 176
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
TF+ LI L N+ EA L+ ++ + P Y V++G CK G+ D
Sbjct: 177 MGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDL 236
Query: 449 ANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
A ++ +ME K + + ++ +I C DA+ +F +M G P+ IT L S
Sbjct: 237 ALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 296
Query: 508 CLLKSGMPGEAARIKESLHENQ 529
CL G +A+R+ + E +
Sbjct: 297 CLCNYGRWSDASRLLSDMIERK 318
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 1/204 (0%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
++ + T++ L+ + +KG A+ LY+ M P+ L++ F ++DRL +K
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
++L N V Y+ L++ K ++D + LFRE+ + T T+ L+ G
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
A D D A M S G P+I+TYN LL GLC+ ++ +A ++ E +S P+
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAM-VVFEYLQRSTMEPD 497
Query: 290 VRSYTTVISGYCKLSKMKEASSLF 313
+ +Y +I G CK K K F
Sbjct: 498 IYTYNIMIEGMCKAGKWKMGGIYF 521
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 113/396 (28%), Positives = 200/396 (50%), Gaps = 2/396 (0%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
+F E + H +++ +L+ C+ S A + M G P G L+ F
Sbjct: 92 YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGF 151
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
LV+R+ + L+ + + N VVY+ L+ L K+ +L+ A+ L E+ + +
Sbjct: 152 CLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADV 211
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
T+N L+ GLC +G +A + L M +PD+VT+ L+ + +D A++L KE
Sbjct: 212 VTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKE 271
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ ++S PN +Y ++I+G C ++ +A FD M G PN T+N+LI GF K
Sbjct: 272 M-IQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFR 330
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
+D + ++++M G D+ T+ +LI GYC+VGK+ LD++ M +R ++ + T
Sbjct: 331 MVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHC 390
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-E 458
+L+ LC + ++ A ++ ++ YN +I G CK+ V++A + + E
Sbjct: 391 ILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE 450
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
KPD T+TI+I G C G +A + +M G
Sbjct: 451 GVKPDARTYTIMILGLCKNGPRREADELIRRMKEEG 486
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 186/377 (49%), Gaps = 8/377 (2%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+ F RL + +L + + + V + +LL N++ DA L +++S
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+N L+ GLC G+++ A + LN M G D+VTYNTLL GLC A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+L+++ +K +P+V ++T +I + K + EA L+ EM +S PN T+NS+I+G
Sbjct: 232 RMLRDM-MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIING 290
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
G + A + M GC P+VVT+ +LI G+C+ V+ G+ L+ M+ +A
Sbjct: 291 LCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNAD 350
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ T++ LI C+ +L+ A D+ + + P + ++ G C +G ++ A +V
Sbjct: 351 IFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA---LV 407
Query: 455 EMEEKCKPDKF----TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
+ ++ + +K+ + I+I G C + A +F ++ G PD T I+ L
Sbjct: 408 KFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLC 467
Query: 511 KSGMPGEAARIKESLHE 527
K+G EA + + E
Sbjct: 468 KNGPRREADELIRRMKE 484
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 1/314 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
YN L+ LC+ G + A L + M G D L++ R + +L +
Sbjct: 178 VYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDM 237
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + V + L+ V VK LD+A L++E+++S T+N ++ GLC G +
Sbjct: 238 MKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRL 297
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+A K + M S GC P++VTYNTL+ G C+ + VD L + + + F+ ++ +Y T
Sbjct: 298 YDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEG-FNADIFTYNT 356
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I GYC++ K++ A +F M P+ T L+ G G ++SAL + M
Sbjct: 357 LIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESE 416
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
+V + +I G C+ KV +L+ + + T++++I LCK+ +EA
Sbjct: 417 KYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREAD 476
Query: 416 DLLRQLKRTDIVPQ 429
+L+R++K I+ Q
Sbjct: 477 ELIRRMKEEGIICQ 490
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 155/308 (50%), Gaps = 2/308 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
+ +DA LF E++ S F L+ + + F M +G S D+ ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
L+H CR + A +L ++ +K + P++ ++ +++ G+C ++++ +A SL M +
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKM-MKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVK 169
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
SG +PN +N+LIDG K G ++ AL + +M G DVVT+ +L+ G C G+ +
Sbjct: 170 SGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSD 229
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
+ +M R+I+ + TF+ LI K L EA++L +++ ++ + P YN +I+
Sbjct: 230 AARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIIN 289
Query: 439 GYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G C G + +A M K C P+ T+ LI+G C + + +F +M G +
Sbjct: 290 GLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNA 349
Query: 498 DEITVRIL 505
D T L
Sbjct: 350 DIFTYNTL 357
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 149/295 (50%), Gaps = 13/295 (4%)
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
P IV + LL ++ + +++ L S ++ S+T +I +C+ S++ A S
Sbjct: 69 PSIVDFTRLLTATANLRRYETVIYFSQKMELYG-ISHDLYSFTILIHCFCRCSRLSFALS 127
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+ +M + G +P+ TF SL+ GF V + A + M+ G P+VV + +LI+G C
Sbjct: 128 VLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLC 187
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ G++N L+L +EM + + A + T++ L++ LC S R +A +LR + + I P
Sbjct: 188 KNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVV 247
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
+ +ID + K GN+DEA + EM + P+ T+ +I G CM GR DA F M
Sbjct: 248 TFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLM 307
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYEGTNSDV 545
+ GC P+ +T L S K M E ++ ++ EG N+D+
Sbjct: 308 ASKGCFPNVVTYNTLISGFCKFRMVDEGMKL-----------FQRMSCEGFNADI 351
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 135/293 (46%), Gaps = 3/293 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHS-SAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR 164
EK + TYN LL LC G S +A++L D M+ PD L+ F
Sbjct: 203 EKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSIN-PDVVTFTALIDVFVKQGN 261
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
LD ++EL E + V N V Y+++++ L H +L DA F + T+N
Sbjct: 262 LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNT 321
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ G C VDE K M G + DI TYNTL+HG C++ ++ A D+ + +
Sbjct: 322 LISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWM-VSR 380
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
+ +P++ ++ ++ G C +++ A FD+M S +N +I G K ++ A
Sbjct: 381 RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKA 440
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
++ ++ G PD T+T +I G C+ G +L M I ++
Sbjct: 441 WELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNA 493
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 117/241 (48%), Gaps = 1/241 (0%)
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
+G+ + ++A +LF EM S P+ F L+ + ++ + +KM +G
Sbjct: 44 TGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGIS 103
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
D+ +FT LI +CR ++++ L + +M S+ TF L+ C NR+ +A L
Sbjct: 104 HDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSL 163
Query: 418 LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCM 476
+ + ++ P +YN +IDG CK+G ++ A ++ EME+K D T+ L+ G C
Sbjct: 164 VILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 477 KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKS 536
GR DA + M+ +PD +T L +K G EA + + + ++ D +
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 537 Y 537
Y
Sbjct: 284 Y 284
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 204/414 (49%), Gaps = 2/414 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + H +TY++ + C++ S A + M G PD L L++ + R+
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + + + L+ L HNK +A+ L ++++ + T+ +
Sbjct: 170 SDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC GD+D A LN M + ++V +NT++ LC+ + V+ A DL E+ K
Sbjct: 230 VNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKG- 288
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PNV +Y ++I+ C + +AS L M PN TFN+LID F K G + A
Sbjct: 289 IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAE 348
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++++M+ PD +T+ LI G+C +++ ++ M +++ ++ T++ LI+
Sbjct: 349 KLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGF 408
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKP-DK 464
CK R+++ +L R++ + +V Y +I G+ ++G+ D A + +M P D
Sbjct: 409 CKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDI 468
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
T++IL+ G C G+ A+VIF + + + + + K+G GEA
Sbjct: 469 MTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEA 522
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 116/418 (27%), Positives = 201/418 (48%), Gaps = 2/418 (0%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S +N LL ++ + L + M+ G D ++ F +L ++ +L
Sbjct: 82 SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
A+ + + V +LL+ ++ DA+ L +++ +T TF L+ GL
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
EA ++ M GC PD+VTY T+++GLC+ ++D A +LL ++ ++ NV
Sbjct: 202 NKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKME-AARIKANVVI 260
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
+ T+I CK ++ A LF EM+ G +PN T+NSLI+ G A + ML
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
P+VVTF +LI+ + + GK+ L EM R+I T+++LI+ C NRL
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
EA+ + + + D +P YN +I+G+CK V++ + EM ++ + T+T +I
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
G G A ++F +M++ D +T IL L G A I + L +++
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSE 498
Score = 158 bits (400), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 162/308 (52%), Gaps = 2/308 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
K+DDA+ LF ++++S FN L+ + + M++ G S D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
++ CR ++ A +L ++ +K + P++ + +++++GYC ++ +A +L D+M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKM-MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KP+ FTF +LI G A+ + +M+ GC PD+VT+ +++ G C+ G ++
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDL 241
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L+L ++M I A++ F+ +I LCK ++ A DL +++ I P YN +I+
Sbjct: 242 ALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLIN 301
Query: 439 GYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
C G +A+ ++ M E+K P+ TF LI +G+ +A + +M+ P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361
Query: 498 DEITVRIL 505
D IT +L
Sbjct: 362 DTITYNLL 369
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 199/445 (44%), Gaps = 69/445 (15%)
Query: 48 KPEAW-FVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTRE 106
KP+ + F ++ LFLH+ + + +LV ++V+R P L
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEA-----------VALVDQMVQRGCQPDL---------- 223
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
TY ++ LC++G A L + M + + ++ S ++
Sbjct: 224 --------VTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVE 275
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
V+ +L E + ++ N V Y++L++ L + + DA L ++ + TFN L+
Sbjct: 276 VAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALI 335
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
G + EA K M PD +TYN L++G C +D A+ + K + K
Sbjct: 336 DAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCL 395
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
PN+++Y T+I+G+CK ++++ LF EM + G N T+ ++I GF + G+ DSA
Sbjct: 396 -PNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQM 454
Query: 347 IYKKMLFHGCPPDVVTFT-----------------------------------SLIEGYC 371
++K+M+ + P D++T++ ++IEG C
Sbjct: 455 VFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMC 514
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
+ GKV DL+ ++ I + T++ +IS LC LQEA DL R++K +P
Sbjct: 515 KAGKVGEAWDLFCSLS---IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSG 571
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEM 456
YN +I + + + ++ EM
Sbjct: 572 TYNTLIRANLRDCDRAASAELIKEM 596
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 137/290 (47%), Gaps = 4/290 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+ + ++G A+ L++ M PD+ L++ F + +RLD +K++
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N Y+ L++ K +++D + LFRE+ + T T+ ++ G AGD
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D A M S DI+TY+ LLHGLC ++D A + K + KS+ N+ Y T
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQ-KSEMELNIFIYNT 508
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G CK K+ EA LF + KP+ T+N++I G + A +++KM G
Sbjct: 509 MIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDG 565
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
P+ T+ +LI R +L EM + T S++ + L
Sbjct: 566 TLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNML 615
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 127/262 (48%), Gaps = 5/262 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+L+ C AK ++ M LP+ + L++ F R++ EL E
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREM 424
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N V Y ++ + D A +F++++ + + T+++L+ GLCS G +
Sbjct: 425 SQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKL 484
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D A ++ +I YNT++ G+C+ +V A DL + +K P+V +Y T
Sbjct: 485 DTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIK----PDVVTYNT 540
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+ISG C ++EA LF +M GT PN+ T+N+LI ++ + ++ + K+M G
Sbjct: 541 MISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSG 600
Query: 356 CPPDVVTFTSLIEGYCRVGKVN 377
D T SL+ G+++
Sbjct: 601 FVGDASTI-SLVTNMLHDGRLD 621
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 209/423 (49%), Gaps = 22/423 (5%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS--SFALVDRL-------D 166
TYN L++ C+ G +A+ L L + +GF V+ SF V L D
Sbjct: 402 TYNTLIKGYCKNGQADNAERL---------LKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ + E + + L+S L KH K A+ L+ + + ++T T N L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC AG +DEAF+ + GC D V+YNTL+ G C K++D A L E+ +K
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM-VKRGL 571
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
P+ +Y+ +I G ++K++EA +D+ R+G P+ +T++ +IDG K +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+ +M+ P+ V + LI YCR G+++ L+L +M + IS + T++ LI +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKF 465
+R++EA+ L +++ + P Y +IDGY K G + + ++ EM K P+K
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
T+T++I G+ G +A + +M G PD IT + LK G EA K S
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA--FKGSD 809
Query: 526 HEN 528
EN
Sbjct: 810 EEN 812
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 192/417 (46%), Gaps = 10/417 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
YN L+ S + G + A + D M G S L+ + + D ++ LL E
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
VN + +++ +L H D A+ E++ + L+ GLC G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 236 DEA----FKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
+A F+FLN G D T N LLHGLC ++D A + KE+ + V
Sbjct: 487 SKALELWFQFLNK----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV- 541
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
SY T+ISG C K+ EA DEM + G KP+ +T++ LI G + ++ A+ +
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+G PDV T++ +I+G C+ + G + + EM ++N+ + ++ LI C+S RL
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTIL 470
A +L +K I P + Y +I G V+EA + EM E +P+ F +T L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
I G+ G+ + +M + P++IT ++ + G EA+R+ + E
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 185/398 (46%), Gaps = 4/398 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ V + T+N ++ L G + A + + M G P LV R+
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNV 224
+ +L E N +VY+NL+ ++ L+ AI + ++LM S L +ST+N
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNT 405
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ G C G D A + L M S G + + ++ +++ LC D A + E+ L++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
SP TT+ISG CK K +A L+ + G + T N+L+ G + G +D A
Sbjct: 466 -MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
I K++L GC D V++ +LI G C K++ EM R + +T+S+LI
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
L N+++EA KR ++P Y+ +IDG CK+ +E EM K +P+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ LI +C GR A+ + M G SP+ T
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 174/386 (45%), Gaps = 3/386 (0%)
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G P L++S + E + C V + ++ ++ K K+++A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ LF ++ + TFN ++ GL G DEAF F M G P ++TY+ L+ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
L R K + A +LKE+ K F PNV Y +I + + + +A + D M G
Sbjct: 340 LTRAKRIGDAYFVLKEM-TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T+N+LI G+ K G D+A + K+ML G + +FTS+I C + L
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
EM RN+S + LIS LCK + +A +L Q V N ++ G C++
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 444 GNVDEANAIVVE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
G +DEA I E + C D+ ++ LI+G C K + +A + +M+ G PD T
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 503 RILSSCLLKSGMPGEAARIKESLHEN 528
IL L EA + + N
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRN 604
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 39/289 (13%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TY++L+ L A +D + +G LPD ++ +R + +E E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
VQ N VVY++L+ C +G
Sbjct: 636 MMSKNVQPNTVVYNHLIR-----------------------------------AYCRSGR 660
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ A + M+ G SP+ TY +L+ G+ I V+ A+ L +E+ ++ PNV YT
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYT 719
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I GY KL +M + L EM PN T+ +I G+ + GN+ A + +M
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
G PD +T+ I GY + G V L+ + + N +A + ++ LI
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 825
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
G +FF K NV + YN L+R+ C+ G S A L + M+ G P+S L+
Sbjct: 629 GQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
+++ R++ +K L E + ++ N Y L+ K ++ CL RE+ + H
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
T+ V++GG G+V EA + LN MR G PD +TY ++G
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG------------Y 795
Query: 277 LKEVGLKSKF-SPNVRSYTTVISGYCKL 303
LK+ G+ F + +Y +I G+ KL
Sbjct: 796 LKQGGVLEAFKGSDEENYAAIIEGWNKL 823
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 185 bits (469), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 126/423 (29%), Positives = 209/423 (49%), Gaps = 22/423 (5%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS--SFALVDRL-------D 166
TYN L++ C+ G +A+ L L + +GF V+ SF V L D
Sbjct: 402 TYNTLIKGYCKNGQADNAERL---------LKEMLSIGFNVNQGSFTSVICLLCSHLMFD 452
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ + E + + L+S L KH K A+ L+ + + ++T T N L+
Sbjct: 453 SALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALL 512
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC AG +DEAF+ + GC D V+YNTL+ G C K++D A L E+ +K
Sbjct: 513 HGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEM-VKRGL 571
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
P+ +Y+ +I G ++K++EA +D+ R+G P+ +T++ +IDG K +
Sbjct: 572 KPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQE 631
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+ +M+ P+ V + LI YCR G+++ L+L +M + IS + T++ LI +
Sbjct: 632 FFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMS 691
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKF 465
+R++EA+ L +++ + P Y +IDGY K G + + ++ EM K P+K
Sbjct: 692 IISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKI 751
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
T+T++I G+ G +A + +M G PD IT + LK G EA K S
Sbjct: 752 TYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA--FKGSD 809
Query: 526 HEN 528
EN
Sbjct: 810 EEN 812
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 116/417 (27%), Positives = 192/417 (46%), Gaps = 10/417 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
YN L+ S + G + A + D M G S L+ + + D ++ LL E
Sbjct: 367 VYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEM 426
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
VN + +++ +L H D A+ E++ + L+ GLC G
Sbjct: 427 LSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486
Query: 236 DEA----FKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
+A F+FLN G D T N LLHGLC ++D A + KE+ + V
Sbjct: 487 SKALELWFQFLNK----GFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRV- 541
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
SY T+ISG C K+ EA DEM + G KP+ +T++ LI G + ++ A+ +
Sbjct: 542 SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDC 601
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+G PDV T++ +I+G C+ + G + + EM ++N+ + ++ LI C+S RL
Sbjct: 602 KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRL 661
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTIL 470
A +L +K I P + Y +I G V+EA + EM E +P+ F +T L
Sbjct: 662 SMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTAL 721
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
I G+ G+ + +M + P++IT ++ + G EA+R+ + E
Sbjct: 722 IDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 778
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/398 (28%), Positives = 185/398 (46%), Gaps = 4/398 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ V + T+N ++ L G + A + + M G P LV R+
Sbjct: 287 EEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRI 346
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNV 224
+ +L E N +VY+NL+ ++ L+ AI + ++LM S L +ST+N
Sbjct: 347 GDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEI-KDLMVSKGLSLTSSTYNT 405
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ G C G D A + L M S G + + ++ +++ LC D A + E+ L++
Sbjct: 406 LIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRN 465
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
SP TT+ISG CK K +A L+ + G + T N+L+ G + G +D A
Sbjct: 466 -MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
I K++L GC D V++ +LI G C K++ EM R + +T+S+LI
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
L N+++EA KR ++P Y+ +IDG CK+ +E EM K +P+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ LI +C GR A+ + M G SP+ T
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSAT 682
Score = 148 bits (374), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 174/386 (45%), Gaps = 3/386 (0%)
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G P L++S + E + C V + ++ ++ K K+++A
Sbjct: 221 GMFPSKTTCNILLTSLVRANEFQKCCEAF-DVVCKGVSPDVYLFTTAINAFCKGGKVEEA 279
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ LF ++ + TFN ++ GL G DEAF F M G P ++TY+ L+ G
Sbjct: 280 VKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKG 339
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
L R K + A +LKE+ K F PNV Y +I + + + +A + D M G
Sbjct: 340 LTRAKRIGDAYFVLKEM-TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSL 398
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T+N+LI G+ K G D+A + K+ML G + +FTS+I C + L
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
EM RN+S + LIS LCK + +A +L Q V N ++ G C++
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518
Query: 444 GNVDEANAIVVE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
G +DEA I E + C D+ ++ LI+G C K + +A + +M+ G PD T
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTY 578
Query: 503 RILSSCLLKSGMPGEAARIKESLHEN 528
IL L EA + + N
Sbjct: 579 SILICGLFNMNKVEEAIQFWDDCKRN 604
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 122/289 (42%), Gaps = 39/289 (13%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TY++L+ L A +D + +G LPD ++ +R + +E E
Sbjct: 576 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDE 635
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
VQ N VVY++L+ C +G
Sbjct: 636 MMSKNVQPNTVVYNHLIR-----------------------------------AYCRSGR 660
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ A + M+ G SP+ TY +L+ G+ I V+ A+ L +E+ ++ PNV YT
Sbjct: 661 LSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYT 719
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I GY KL +M + L EM PN T+ +I G+ + GN+ A + +M
Sbjct: 720 ALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
G PD +T+ I GY + G V L+ + + N +A + ++ LI
Sbjct: 780 GIVPDSITYKEFIYGYLKQGGV---LEAFKGSDEENYAAIIEGWNKLIQ 825
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
G +FF K NV + YN L+R+ C+ G S A L + M+ G P+S L+
Sbjct: 629 GQEFFDEMMSK-NVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 687
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
+++ R++ +K L E + ++ N Y L+ K ++ CL RE+ + H
Sbjct: 688 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVH 747
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
T+ V++GG G+V EA + LN MR G PD +TY ++G
Sbjct: 748 PNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYG------------Y 795
Query: 277 LKEVGLKSKF-SPNVRSYTTVISGYCKL 303
LK+ G+ F + +Y +I G+ KL
Sbjct: 796 LKQGGVLEAFKGSDEENYAAIIEGWNKL 823
>AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:550340-552625 REVERSE
LENGTH=761
Length = 761
Score = 185 bits (469), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 202/419 (48%), Gaps = 7/419 (1%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
+ +TYN+++ +C++G +A+ L++ M+F G +PD+ ++ F V RLD +
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E + + + + Y+ L++ K KL + +RE+ + +++ L+ C
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G + +A KF MR G P+ TY +L+ C+I + A L E+ L+ NV +
Sbjct: 381 GMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM-LQVGVEWNVVT 439
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
YT +I G C +MKEA LF +MD +G PN ++N+LI GFVK NMD AL + ++
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G PD++ + + I G C + K+ + +EM I A+ ++ L+ KS
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCK----SGNVDEANAIVVEMEEKCKPDKFTFT 468
E LL ++K DI + +IDG CK S VD N I + + + FT
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF--GLQANAAIFT 617
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+I G C + A +F +M+ G PD L K G EA +++ + E
Sbjct: 618 AMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAE 676
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/497 (27%), Positives = 232/497 (46%), Gaps = 30/497 (6%)
Query: 52 WFVKIVSTLFLHSNSLDTRVLS-YFGKHLTPSLVLEVVKRL-NNPILGFKFFQFTREKLN 109
W K+V H++ D L F L P V V+ L +P L FKFF+++ +
Sbjct: 83 WIRKVV-----HNDLWDDPGLEKLFDLTLAPIWVPRVLVELKEDPKLAFKFFKWSMTRNG 137
Query: 110 VHHSFWTYNMLLRSL-CQKGLHSSAKLL-------YDCMRFDGKLPDSRLLGFLVSSFAL 161
HS +Y ++ L C + + + +L DC FD L +R V F +
Sbjct: 138 FKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFD-VLWSTR--NVCVPGFGV 194
Query: 162 VDRLD---VSKELLAEA-QCNKVQVNAVVY------DNLLSVLVKHNKLDDAICLFRELM 211
D L + +L EA QC V+ + LL K K DD F++++
Sbjct: 195 FDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMI 254
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD 271
+ + T+N+++ +C GDV+ A M+ G PD VTYN+++ G ++ +D
Sbjct: 255 GAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLD 314
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
+E+ P+V +Y +I+ +CK K+ + EM +G KPN ++++L
Sbjct: 315 DTVCFFEEMK-DMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTL 373
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+D F K G M A+ Y M G P+ T+TSLI+ C++G ++ L +EM +
Sbjct: 374 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGV 433
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
++ T++ LI LC + R++EA +L ++ ++P + YN +I G+ K+ N+D A
Sbjct: 434 EWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALE 493
Query: 452 IVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
++ E++ + KPD + I G C + A V+ +M G + + L
Sbjct: 494 LLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYF 553
Query: 511 KSGMPGEAARIKESLHE 527
KSG P E + + + E
Sbjct: 554 KSGNPTEGLHLLDEMKE 570
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 13/406 (3%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
F ++ L L G+ A + M+ P +R L+ FA + + D K
Sbjct: 191 GFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFF 250
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ + Y+ ++ + K ++ A LF E+ +T T+N ++ G
Sbjct: 251 KDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKV 310
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV---GLKSKFSPN 289
G +D+ F M+ C PD++TYN L++ C+ ++ + +E+ GLK PN
Sbjct: 311 GRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK----PN 366
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V SY+T++ +CK M++A + +M R G PN +T+ SLID K+GN+ A +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+ML G +VVT+T+LI+G C ++ +L+ +M+T + +L +++ LI K+
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFT 468
+ A +LL +LK I P +Y I G C ++ A ++ EM+E K + +T
Sbjct: 487 NMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYT 546
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
L+ + G + + + +M +I V +++ C+L G+
Sbjct: 547 TLMDAYFKSGNPTEGLHLLDEMKEL-----DIEVTVVTFCVLIDGL 587
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/453 (24%), Positives = 181/453 (39%), Gaps = 77/453 (16%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ C+ G Y M+ +G P+ LV +F + + + +
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + N Y +L+ K L DA L E+++ T+ L+ GLC A +
Sbjct: 394 RRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERM 453
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA + M + G P++ +YN L+HG + K +DRA +LL E+ + P++ Y T
Sbjct: 454 KEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRG-IKPDLLLYGT 512
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL---------- 345
I G C L K++ A + +EM G K N+ + +L+D + K GN L
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 346 -------------GIYKKMLFH-------------GCPPDVVTFTSLIEGYCRVGKVNYG 379
G+ K L G + FT++I+G C
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLC-------- 624
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
K N+++ A L Q+ + +VP + Y ++DG
Sbjct: 625 ---------------------------KDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDG 657
Query: 440 YCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAG--HCMKGRAPDAIVIFYKMLATGCS 496
K GNV EA A+ +M E K D +T L+ G HC + A +M+ G
Sbjct: 658 NFKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC--NQLQKARSFLEEMIGEGIH 715
Query: 497 PDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
PDE+ + + G EA ++ L ++Q
Sbjct: 716 PDEVLCISVLKKHYELGCIDEAVELQSYLMKHQ 748
>AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:5368034-5369641 FORWARD
LENGTH=535
Length = 535
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 124/454 (27%), Positives = 218/454 (48%), Gaps = 11/454 (2%)
Query: 75 FGKHLTPSLVLEVVKRLNNPILGFKFFQFT-REKLNVHHSFWTYNMLLRSLCQKGLHSSA 133
+ + L P ++ ++ + N L + F + + H++ TY+ +L L +
Sbjct: 43 WPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPV 102
Query: 134 KLLYDCMRFDGKLPDSR----LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDN 189
+ L +R P + L L+ ++ L R + S + V+ + +
Sbjct: 103 ESLMADLR--NSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNT 160
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETS-TFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
LL+VL+++ + D +F+ S T N+L+ LC D++ A+K L+ + S
Sbjct: 161 LLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSM 220
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G P++VTY T+L G +++ A+ +L+E+ L + P+ +YT ++ GYCKL + E
Sbjct: 221 GLVPNLVTYTTILGGYVARGDMESAKRVLEEM-LDRGWYPDATTYTVLMDGYCKLGRFSE 279
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A+++ D+M+++ +PN T+ +I K A ++ +ML PD +I+
Sbjct: 280 AATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKVID 339
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
C KV+ LW +M N S LI +LCK R+ EAR L + ++ I P
Sbjct: 340 ALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGSI-P 398
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
YN +I G C+ G + EA + +M E KCKP+ FT+ +LI G G + + +
Sbjct: 399 SLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVRVL 458
Query: 488 YKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ML GC P++ T IL L K G +A +I
Sbjct: 459 EEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKI 492
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 167/350 (47%), Gaps = 4/350 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE--TSTFNVLMGGLCSAGDVDEAFK 240
N Y ++L L + D L +L S+ ++ + F L+ AG + + +
Sbjct: 82 NYDTYHSILFKLSRARAFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMR 141
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
+ FG + + NTLL+ L + + D + K +PN+ + ++
Sbjct: 142 IFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKAL 201
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
CK + ++ A + DE+ G PN T+ +++ G+V G+M+SA + ++ML G PD
Sbjct: 202 CKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDA 261
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
T+T L++GYC++G+ + + +M I + T+ V+I LCK + EAR++ +
Sbjct: 262 TTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDE 321
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGR 479
+ +P S+ VID C+ VDEA + +M + C PD + LI C +GR
Sbjct: 322 MLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+A +F + G P +T L + + + G EA R+ + ++E +
Sbjct: 382 VTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 167/384 (43%), Gaps = 40/384 (10%)
Query: 101 FQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA 160
F+ ++E + + +T N+L+++LC+K SA + D + G +P
Sbjct: 178 FKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVP------------- 224
Query: 161 LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS 220
N V Y +L V ++ A + E++ + + +
Sbjct: 225 ----------------------NLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAT 262
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
T+ VLM G C G EA ++ M P+ VTY ++ LC+ K+ AR++ E+
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEM 322
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
L+ F P+ VI C+ K+ EA L+ +M ++ P+ ++LI K G
Sbjct: 323 -LERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGR 381
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ A ++ + G P ++T+ +LI G C G++ LW +M R + T++V
Sbjct: 382 VTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNV 440
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC 460
LI L K+ ++E +L ++ P + + + +G K G ++A IV
Sbjct: 441 LIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMAVMNG 500
Query: 461 KPDKFTFTILI---AGHCMKGRAP 481
K DK ++ + + AG KG P
Sbjct: 501 KVDKESWELFLKKFAGELDKGVLP 524
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/177 (20%), Positives = 78/177 (44%), Gaps = 2/177 (1%)
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
F L+ Y G+ + ++ + + S+ + + L++ L ++ R + + K
Sbjct: 123 FIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSK 182
Query: 423 RT-DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRA 480
+ I P N ++ CK +++ A ++ E+ P+ T+T ++ G+ +G
Sbjct: 183 ESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDM 242
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSY 537
A + +ML G PD T +L K G EAA + + + +N+ + + +Y
Sbjct: 243 ESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTY 299
>AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:2181717-2184449 FORWARD
LENGTH=871
Length = 871
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 210/449 (46%), Gaps = 43/449 (9%)
Query: 91 LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSR 150
+N+ + FQ +E L + + L+R ++G SA L D M+ D
Sbjct: 181 VNHSDMMLTLFQQMQE-LGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIV 239
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
L + SF V ++D++ + E + N ++ + V Y +++ VL K N+LD+A+ +F L
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHL 299
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG--------------------- 249
++ T +N ++ G SAG DEA+ L R+ G
Sbjct: 300 EKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKV 359
Query: 250 -------------CSPDIVTYNTLLHGLCRIKEVDRA---RDLLKEVGLKSKFSPNVRSY 293
+P++ TYN L+ LCR ++D A RD +++ GL PNVR+
Sbjct: 360 DEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGL----FPNVRTV 415
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
++ CK K+ EA ++F+EMD P+ TF SLIDG KVG +D A +Y+KML
Sbjct: 416 NIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLD 475
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
C + + +TSLI+ + G+ G ++ +M +N S L + + + K+ ++
Sbjct: 476 SDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEK 535
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIA 472
R + ++K VP Y+ +I G K+G +E + M+E+ C D + I+I
Sbjct: 536 GRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVID 595
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
G C G+ A + +M G P +T
Sbjct: 596 GFCKCGKVNKAYQLLEEMKTKGFEPTVVT 624
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/429 (26%), Positives = 204/429 (47%), Gaps = 2/429 (0%)
Query: 103 FTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALV 162
F K + + TYN+L+ LC+ G +A L D M+ G P+ R + +V
Sbjct: 366 FEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+LD + + E + + + +L+ L K ++DDA ++ +++ S + +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
L+ + G ++ K M + CSPD+ NT + + + E ++ R + +E+
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+ +F P+ RSY+ +I G K E LF M G + +N +IDGF K G ++
Sbjct: 546 R-RFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A + ++M G P VVT+ S+I+G ++ +++ L+ E ++ I ++ +S LI
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLI 664
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCK 461
K R+ EA +L +L + + P +N ++D K+ ++EA M+E KC
Sbjct: 665 DGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCT 724
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
P++ T+ ILI G C + A V + +M G P I+ + S L K+G EA +
Sbjct: 725 PNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGAL 784
Query: 522 KESLHENQG 530
+ N G
Sbjct: 785 FDRFKANGG 793
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 114/453 (25%), Positives = 211/453 (46%), Gaps = 10/453 (2%)
Query: 81 PSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCM 140
P V+ V++RL + ++F++ + + H +YN LL + + + + M
Sbjct: 65 PEFVIGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEM 124
Query: 141 RFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKL 200
G P +V ++L +++ + K + Y L+ N
Sbjct: 125 SVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHS 184
Query: 201 DDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTL 260
D + LF+++ F L+ G G VD A L+ M+S DIV YN
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 261 LHGLCRIKEVDRARDLLKEV---GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMD 317
+ ++ +VD A E+ GLK P+ +YT++I CK +++ EA +F+ ++
Sbjct: 245 IDSFGKVGKVDMAWKFFHEIEANGLK----PDEVTYTSMIGVLCKANRLDEAVEMFEHLE 300
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
++ P + +N++I G+ G D A + ++ G P V+ + ++ ++GKV+
Sbjct: 301 KNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVD 360
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
L ++ EM ++ + +L T+++LI LC++ +L A +L +++ + P N ++
Sbjct: 361 EALKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMV 419
Query: 438 DGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
D CKS +DEA A+ EM+ K C PD+ TF LI G GR DA ++ KML + C
Sbjct: 420 DRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCR 479
Query: 497 PDEITVRILSSCLLKSGMPGEAARI-KESLHEN 528
+ I L G + +I K+ +++N
Sbjct: 480 TNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN 512
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 167/346 (48%), Gaps = 1/346 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y L+++ G +Y M PD +LL + + + + E +
Sbjct: 485 YTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIK 544
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ +A Y L+ L+K ++ LF + L+T +N+++ G C G V+
Sbjct: 545 ARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVN 604
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
+A++ L M++ G P +VTY +++ GL +I +D A L +E K + NV Y+++
Sbjct: 605 KAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSK-RIELNVVIYSSL 663
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I G+ K+ ++ EA + +E+ + G PN +T+NSL+D VK ++ AL ++ M C
Sbjct: 664 IDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKC 723
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P+ VT+ LI G C+V K N W EM + + S +++ +IS L K+ + EA
Sbjct: 724 TPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGA 783
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKP 462
L + K VP + YN +I+G +A ++ E + P
Sbjct: 784 LFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLP 829
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 149/299 (49%), Gaps = 1/299 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+Y++L+ L + G + L+ M+ G + D+R ++ F +++ + +LL E
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + V Y +++ L K ++LD+A LF E L ++ L+ G G +
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA+ L + G +P++ T+N+LL L + +E++ A + + + K +PN +Y
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK-ELKCTPNQVTYGI 732
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+G CK+ K +A + EM + G KP+ ++ ++I G K GN+ A ++ + +G
Sbjct: 733 LINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANG 792
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
PD + ++IEG + L+ E R + T VL+ L K++ L++A
Sbjct: 793 GVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 111/283 (39%), Gaps = 39/283 (13%)
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
SF P+ V + L R+K+V+RA + + +++ SY +++ +
Sbjct: 60 SFKPQPEFV-----IGVLRRLKDVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNF 114
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+ EM +G P+ T ++ G VK + + + M P +T+L
Sbjct: 115 DALDQILGEMSVAGFGPSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTL 174
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I + V + L L+ +M ++H F+ LI K R+ A LL ++K + +
Sbjct: 175 IGAFSAVNHSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSL 234
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
+YN ID + K G VD A KF
Sbjct: 235 DADIVLYNVCIDSFGKVGKVDMAW-------------KF--------------------- 260
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
F+++ A G PDE+T + L K+ EA + E L +N+
Sbjct: 261 FHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
>AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7462820-7465740 FORWARD
LENGTH=874
Length = 874
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/441 (27%), Positives = 202/441 (45%), Gaps = 29/441 (6%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+N+L+R+LC +A+ L+D M G P+ G LV + D ELL
Sbjct: 148 YTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNA 207
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ V N V+Y+ ++S + + DD+ + ++ + TFN + LC G
Sbjct: 208 MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGK 267
Query: 235 VDEAFKFLNGMR---SFGCS-PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
V +A + + M G P+ +TYN +L G C++ ++ A+ L + + + ++
Sbjct: 268 VLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLA-SL 326
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
+SY + G + K EA ++ +M G P+ +++N L+DG K+G + A I
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGL 386
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
M +G PD VT+ L+ GYC VGKV+ L EM N + +T ++L+ L K R
Sbjct: 387 MKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGR 446
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-------------- 456
+ EA +LLR++ N ++DG C SG +D+A IV M
Sbjct: 447 ISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNS 506
Query: 457 ----------EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILS 506
E C PD T++ L+ G C GR +A +F +M+ PD + I
Sbjct: 507 YIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFI 566
Query: 507 SCLLKSGMPGEAARIKESLHE 527
K G A R+ + + +
Sbjct: 567 HHFCKQGKISSAFRVLKDMEK 587
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 121/464 (26%), Positives = 223/464 (48%), Gaps = 20/464 (4%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQ--FTREKLNVHH-SFWTYNMLLRSLCQKGLHSSAKL 135
+ SLV ++K NNP L ++ F+ F+ H S + R L + +H +
Sbjct: 1 MEQSLVKALLKNTNNPRLAWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQE 60
Query: 136 LYDCMRFDGKLPDSRLLGFL--VSSFALVDRLDVS--KELLAEAQCNKVQVNAVVYDNLL 191
L++ + + ++L L VS FA + +D + + L ++ + + + +Y+ LL
Sbjct: 61 LHNLI-LSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENKPSVYLYNLLL 119
Query: 192 SVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS 251
+K +++ L+++++ +T TFN+L+ LC + VD A + + M GC
Sbjct: 120 ESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCK 179
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS--PNVRSYTTVISGYCKLSKMKEA 309
P+ T+ L+ G C+ D+ +LL + F PN Y T++S +C+ + ++
Sbjct: 180 PNEFTFGILVRGYCKAGLTDKGLELLNAM---ESFGVLPNKVIYNTIVSSFCREGRNDDS 236
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM---LFHGCP-PDVVTFTS 365
+ ++M G P+ TFNS I K G + A I+ M + G P P+ +T+
Sbjct: 237 EKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNL 296
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
+++G+C+VG + L+ + + ASL ++++ + L + + EA +L+Q+
Sbjct: 297 MLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKG 356
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKPDKFTFTILIAGHCMKGRAPDA 483
I P YN ++DG CK G + +A IV M+ C PD T+ L+ G+C G+ A
Sbjct: 357 IGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVC-PDAVTYGCLLHGYCSVGKVDAA 415
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+ +M+ C P+ T IL L K G EA + ++E
Sbjct: 416 KSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNE 459
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/440 (26%), Positives = 204/440 (46%), Gaps = 28/440 (6%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S ++YN+L+ LC+ G+ S AK + M+ +G PD+ G L+ + V ++D +K LL
Sbjct: 360 SIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLL 419
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E N NA + LL L K ++ +A L R++ L+T T N+++ GLC +
Sbjct: 420 QEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGS 479
Query: 233 GDVDEAFKFLNGMRSFG-----------------------CSPDIVTYNTLLHGLCRIKE 269
G++D+A + + GMR G C PD++TY+TLL+GLC+
Sbjct: 480 GELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGR 539
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
A++L E+ + K P+ +Y I +CK K+ A + +M++ G + T+N
Sbjct: 540 FAEAKNLFAEM-MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYN 598
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
SLI G + G+ +M G P++ T+ + I+ C KV +L EM +
Sbjct: 599 SLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQK 658
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ-PSIYNHVIDGYCKSGNVDE 448
NI+ ++ +F LI CK A+++ I Q +Y+ + + +G + +
Sbjct: 659 NIAPNVFSFKYLIEAFCKVPDFDMAQEVFET--AVSICGQKEGLYSLMFNELLAAGQLLK 716
Query: 449 ANAIV-VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
A ++ ++ + F + L+ C K A I +KM+ G D + +
Sbjct: 717 ATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVID 776
Query: 508 CLLKSGMPGEAARIKESLHE 527
L K G EA + + E
Sbjct: 777 GLGKMGNKKEANSFADKMME 796
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 123/480 (25%), Positives = 219/480 (45%), Gaps = 19/480 (3%)
Query: 51 AW--FVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTR--E 106
AW F +I S+ S+ + + L + + E ++ L+N IL Q T+
Sbjct: 19 AWRIFKRIFSSPSEESHGISLDATPTIARILVRAKMHEEIQELHNLILSSSI-QKTKLSS 77
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
L+V F N + ++ Q L S RF P L L+ S R++
Sbjct: 78 LLSVVSIFAKSNHIDKAFPQFQLVRS--------RFPENKPSVYLYNLLLESCIKERRVE 129
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
L + + ++ L+ L + +D A LF E+ TF +L+
Sbjct: 130 FVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILV 189
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
G C AG D+ + LN M SFG P+ V YNT++ CR D + +++++ +
Sbjct: 190 RGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKM-REEGL 248
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG----TKPNAFTFNSLIDGFVKVGNMD 342
P++ ++ + IS CK K+ +AS +F +M+ +PN+ T+N ++ GF KVG ++
Sbjct: 249 VPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLE 308
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A +++ + + + ++ ++G R GK + +M + I S++++++L+
Sbjct: 309 DAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILM 368
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCK 461
LCK L +A+ ++ +KR + P Y ++ GYC G VD A +++ E M C
Sbjct: 369 DGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCL 428
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
P+ +T IL+ GR +A + KM G D +T I+ L SG +A I
Sbjct: 429 PNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/440 (26%), Positives = 198/440 (45%), Gaps = 38/440 (8%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
F+ RE ++ S +YN+ L+ L + G A+ + M G P L+
Sbjct: 313 LFESIRENDDLA-SLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGL 371
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
+ L +K ++ + N V +AV Y LL K+D A L +E+MR++
Sbjct: 372 CKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNA 431
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
T N+L+ L G + EA + L M G D VT N ++ GLC E+D+A +++K
Sbjct: 432 YTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKG 491
Query: 280 ----------------VGL------KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMD 317
+GL ++ P++ +Y+T+++G CK + EA +LF EM
Sbjct: 492 MRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMM 551
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+P++ +N I F K G + SA + K M GC + T+ SLI G ++
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIF 611
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
L EM + IS ++ T++ I YLC+ ++++A +LL ++ + +I P + ++I
Sbjct: 612 EIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLI 671
Query: 438 DGYCKSGNVDEANAIVVEMEEKCKPDKFTFT-----ILIAGHCMKG---------RAPDA 483
+ +CK + D A + C + ++ +L AG +K R +
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFEL 731
Query: 484 IVIFYKMLATG-CSPDEITV 502
YK L C DE+ V
Sbjct: 732 GTFLYKDLVESLCKKDELEV 751
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 9/254 (3%)
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRS---GTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
S +V+S + K + + +A F ++ RS KP+ + +N L++ +K ++ +Y
Sbjct: 77 SLLSVVSIFAKSNHIDKAFPQF-QLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLY 135
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
K M+ G P TF LI C V+ +L+ EM + + TF +L+ CK+
Sbjct: 136 KDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKA 195
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTF 467
+ +LL ++ ++P IYN ++ +C+ G D++ +V +M EE PD TF
Sbjct: 196 GLTDKGLELLNAMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTF 255
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATG----CSPDEITVRILSSCLLKSGMPGEAARIKE 523
I+ C +G+ DA IF M P+ IT ++ K G+ +A + E
Sbjct: 256 NSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFE 315
Query: 524 SLHENQGDSLKKSY 537
S+ EN + +SY
Sbjct: 316 SIRENDDLASLQSY 329
>AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:5461031-5462545 FORWARD
LENGTH=504
Length = 504
Score = 181 bits (460), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/419 (27%), Positives = 197/419 (47%), Gaps = 37/419 (8%)
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
LP L+S+ + + + DV L + Q + N + LL+ + ++L A+
Sbjct: 78 LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALS 137
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
++++ TF L+ G C V +A + M G P++V YNT++ GLC
Sbjct: 138 FLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLC 197
Query: 266 RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNA 325
+ K+VD A DLL + K P+V +Y ++ISG C + +A+ + M + P+
Sbjct: 198 KSKQVDNALDLLNRME-KDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDV 256
Query: 326 FTFNSLIDGFVKVGNMDSALGIYKKMLFH------------------------------- 354
FTFN+LID VK G + A Y++M+
Sbjct: 257 FTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGF 316
Query: 355 ----GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
GC PDVVT++ LI GYC+ KV +G+ L+ EM+ R + + T+++LI C++ +
Sbjct: 317 MVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGK 376
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTI 469
L A ++ R++ + P YN ++ G C +G +++A I+ +M++ D T+ I
Sbjct: 377 LNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNI 436
Query: 470 LIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+I G C G DA I+ + G PD T + L K G+ EA + + E+
Sbjct: 437 IIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKED 495
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 200/398 (50%), Gaps = 2/398 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ L + H+ T N+LL C+ S A M G P G L++ F DR+
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ + + + N V+Y+ ++ L K ++D+A+ L + + + T+N L
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLCS+G +A + ++ M PD+ T+N L+ + V A + +E+ ++
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM-IRRS 286
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
P++ +Y+ +I G C S++ EA +F M G P+ T++ LI+G+ K ++ +
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGM 346
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++ +M G + VT+T LI+GYCR GK+N +++ M + ++ T++VL+ L
Sbjct: 347 KLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGL 406
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDK 464
C + ++++A +L +++ + YN +I G CK+G V +A I + + PD
Sbjct: 407 CDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDI 466
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
+T+T ++ G KG +A +F KM G P+E V
Sbjct: 467 WTYTTMMLGLYKKGLRREADALFRKMKEDGILPNECYV 504
Score = 168 bits (426), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 112/351 (31%), Positives = 170/351 (48%), Gaps = 10/351 (2%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
+ LLS + K K D I L+ ++ T N+L+ C + A FL M
Sbjct: 84 FSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMI 143
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLL----KEVGLKSKFSPNVRSYTTVISGYCK 302
G P IVT+ +LL+G CR DR D L + VG+ K PNV Y T+I G CK
Sbjct: 144 KLGHEPSIVTFGSLLNGFCR---GDRVYDALYMFDQMVGMGYK--PNVVIYNTIIDGLCK 198
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
++ A L + M++ G P+ T+NSLI G G A + M PDV T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
F +LI+ + G+V+ + + EM R++ + T+S+LI LC +RL EA ++ +
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAP 481
P Y+ +I+GYCKS V+ + EM ++ + T+TILI G+C G+
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDS 532
A IF +M+ G P+ IT +L L +G +A I + +N D+
Sbjct: 379 VAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 124/250 (49%), Gaps = 2/250 (0%)
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
Y +L R ++D + DL + ++ + P++ ++ ++S K+ K L+++M
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHM-VQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQM 107
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
G N T N L++ F + + AL KM+ G P +VTF SL+ G+CR +V
Sbjct: 108 QMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRV 167
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
L ++ +M ++ ++ +I LCKS ++ A DLL ++++ I P YN +
Sbjct: 168 YDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSL 227
Query: 437 IDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I G C SG +A +V M ++ PD FTF LI +GR +A + +M+
Sbjct: 228 ISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSL 287
Query: 496 SPDEITVRIL 505
PD +T +L
Sbjct: 288 DPDIVTYSLL 297
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 106/238 (44%), Gaps = 1/238 (0%)
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
N Y ++ + K+ ++ LF M + P+ F+ L+ K+ D + ++
Sbjct: 45 NGSDYREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLW 104
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
++M G P ++ T L+ +CR +++ L +M S+ TF L++ C+
Sbjct: 105 EQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRG 164
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTF 467
+R+ +A + Q+ P IYN +IDG CKS VD A ++ ME + PD T+
Sbjct: 165 DRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTY 224
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
LI+G C GR DA + M PD T L +K G EA E +
Sbjct: 225 NSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEM 282
>AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24681550-24683514 FORWARD
LENGTH=654
Length = 654
Score = 181 bits (459), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 204/405 (50%), Gaps = 12/405 (2%)
Query: 108 LNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDV 167
L + + + Y + + LC+ A+ +++ M+ G LP+ ++ + +
Sbjct: 228 LGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+ L E ++ N VV+ L+ K +L A LF +++ +N L+
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
G C +G++ EA L+ M S SPD+ TY L++GLC +V A L +++ + F
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIF- 406
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+ +Y ++I GYCK M++A L EM SG +PN TF++LIDG+ V ++ +A+G+
Sbjct: 407 PSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGL 466
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
Y +M G PDVVT+T+LI+ + + + L L+ +M I + HTF+ L+ K
Sbjct: 467 YFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWK 526
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHV-----IDGYCKSGNVDEANAIVVEMEE-KCK 461
RL A D ++ + Q S +NHV I+G C++G + A+ +M
Sbjct: 527 EGRLSVAIDFYQENNQ-----QRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGIT 581
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILS 506
PD ++ ++ GH + R D +++ M+ TG P+ + ++L+
Sbjct: 582 PDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLLVNQLLA 626
Score = 161 bits (407), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 187/388 (48%), Gaps = 12/388 (3%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y +L + ++GL+S + L D M G P+ + + ++++ ++++ +
Sbjct: 202 YFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMK 261
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ V N Y ++ K + A L++E++ + F L+ G C A ++
Sbjct: 262 KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELV 321
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-----FSPNVR 291
A M FG P++ YN L+HG C+ + ++L+ VGL S+ SP+V
Sbjct: 322 TARSLFVHMVKFGVDPNLYVYNCLIHGHCK------SGNMLEAVGLLSEMESLNLSPDVF 375
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+YT +I+G C ++ EA+ LF +M P++ T+NSLI G+ K NM+ AL + +M
Sbjct: 376 TYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEM 435
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
G P+++TF++LI+GYC V + + L+ EM + I + T++ LI K +
Sbjct: 436 TASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANM 495
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTIL 470
+EA L + I P + ++DG+ K G + A E +++ + FT L
Sbjct: 496 KEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCL 555
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPD 498
I G C G A F M + G +PD
Sbjct: 556 IEGLCQNGYILRASRFFSDMRSCGITPD 583
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 170/340 (50%), Gaps = 2/340 (0%)
Query: 189 NLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
++L+ LV+ + D ++ ++ + + VL G + K L+ M S
Sbjct: 169 SILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSL 228
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G P++ Y + LCR +++ A + E+ K PN+ +Y+ +I GYCK +++
Sbjct: 229 GIKPNVYIYTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A L+ E+ + PN F +L+DGF K + +A ++ M+ G P++ + LI
Sbjct: 288 AYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIH 347
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
G+C+ G + + L EM + N+S + T+++LI+ LC +++ EA L +++K I P
Sbjct: 348 GHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP 407
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIF 487
+ YN +I GYCK N+++A + EM +P+ TF+ LI G+C A+ ++
Sbjct: 408 SSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLY 467
Query: 488 YKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
++M G PD +T L K EA R+ + E
Sbjct: 468 FEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 169/358 (47%), Gaps = 2/358 (0%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K F+ + K V + +TY+ ++ C+ G A LY + LP+ + G LV
Sbjct: 255 KMFELMK-KHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDG 313
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
F L ++ L V N VY+ L+ K + +A+ L E+ + +
Sbjct: 314 FCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPD 373
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
T+ +L+ GLC V EA + M++ P TYN+L+HG C+ +++A DL
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
E+ S PN+ +++T+I GYC + +K A L+ EM G P+ T+ +LID K
Sbjct: 434 EMT-ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKE 492
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
NM AL +Y ML G P+ TF L++G+ + G+++ +D + E N + + F
Sbjct: 493 ANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+ LI LC++ + A ++ I P Y ++ G+ + + + + +M
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDM 610
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/277 (24%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
KFS V ++ +I + ++ +EA + EM S P++ S+++G V+ DS
Sbjct: 129 KFSIGV--FSLLIMEFLEMGLFEEALWVSREMKCS---PDSKACLSILNGLVRRRRFDSV 183
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
Y+ M+ G PDV + L + + G + L EM + I +++ +++ I
Sbjct: 184 WVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILD 243
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-------- 456
LC+ N+++EA + +K+ ++P Y+ +IDGYCK+GNV +A + E+
Sbjct: 244 LCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPN 303
Query: 457 --------EEKCK--------------------PDKFTFTILIAGHCMKGRAPDAIVIFY 488
+ CK P+ + + LI GHC G +A+ +
Sbjct: 304 VVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLS 363
Query: 489 KMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+M + SPD T IL + L EA R+ + +
Sbjct: 364 EMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKM 400
>AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8128086-8130242 REVERSE
LENGTH=718
Length = 718
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 117/399 (29%), Positives = 203/399 (50%), Gaps = 7/399 (1%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+++N L+ C++GL A + D M G P + + + R+D ++ELL+
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
V V Y+ L+ +K K +A LF +L H T+N L+ GLC +G+
Sbjct: 369 MAAPDV----VSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
++ A + M + PD++TY TL+ G + + A ++ E+ L+ P+ +YT
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEM-LRKGIKPDGYAYT 483
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGT-KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
T G +L +A L +EM + P+ +N IDG KVGN+ A+ +K+
Sbjct: 484 TRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFR 543
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
G PD VT+T++I GY G+ +L+ EM + + S+ T+ VLI K+ RL++
Sbjct: 544 VGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQ 603
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIA 472
A ++K+ + P +N ++ G CK+GN+DEA + +MEE+ P+K+++T+LI+
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLK 511
+C + + + ++ +ML PD T R L L K
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 208/457 (45%), Gaps = 42/457 (9%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N++L+ L + + A +Y+ M G +P ++ S L+ ++ E +
Sbjct: 207 NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKR 266
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
++ + V Y+ L++ K+ K+++A ++ RS + +FN L+ G C G D+
Sbjct: 267 RNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDD 326
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A+ + M + G P TYN + LC +D AR+LL + +P+V SY T++
Sbjct: 327 AWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA-----APDVVSYNTLM 381
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
GY K+ K EAS LFD++ P+ T+N+LIDG + GN++ A + ++M
Sbjct: 382 HGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIF 441
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI-------------------------- 391
PDV+T+T+L++G+ + G ++ +++ EM + I
Sbjct: 442 PDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRL 501
Query: 392 ----------SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ L ++V I LCK L +A + R++ R +VP Y VI GY
Sbjct: 502 HEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 561
Query: 442 KSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
++G A + EM ++ P T+ +LI GH GR A +M G P+ +
Sbjct: 562 ENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVM 621
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSY 537
T L + K+G EA R + E K SY
Sbjct: 622 THNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSY 658
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 146/314 (46%), Gaps = 2/314 (0%)
Query: 109 NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
++H S TYN L+ LC+ G A+ L + M PD LV F L ++
Sbjct: 404 DIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMA 463
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMG 227
E+ E ++ + Y ++ D A L E++ + H + + +NV +
Sbjct: 464 TEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRID 523
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
GLC G++ +A +F + G PD VTY T++ G + AR+L E+ L+ +
Sbjct: 524 GLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEM-LRKRLY 582
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+V +Y +I G+ K ++++A EM + G +PN T N+L+ G K GN+D A
Sbjct: 583 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRY 642
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
KM G PP+ ++T LI C K + L+ EM + I +T L +L K
Sbjct: 643 LCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRALFKHLEK 702
Query: 408 SNRLQEARDLLRQL 421
+ +E L R L
Sbjct: 703 DHESREVEFLERLL 716
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/448 (24%), Positives = 201/448 (44%), Gaps = 30/448 (6%)
Query: 81 PSLVLEVVKRLN-NPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDC 139
P+L++ V+ + P + F+FF + + + +V S + +L L + L S A
Sbjct: 85 PNLLIRVLNMIRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEA------ 138
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
+LV+ ++ + +LL + +K+ ++ L V K +
Sbjct: 139 --------------YLVAERSIDLGMHEIDDLLIDGSFDKLIALKLLDLLLW-VYTKKSM 183
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
+ + F +++R N+++ L + +++A M G P ++T+NT
Sbjct: 184 AEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNT 243
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKS-KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+L + +++R + E+ ++ +FS +Y +I+G+ K KM+EA +M R
Sbjct: 244 MLDSCFKAGDLERVDKIWLEMKRRNIEFSE--VTYNILINGFSKNGKMEEARRFHGDMRR 301
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
SG ++FN LI+G+ K G D A G+ +ML G P T+ I C G+++
Sbjct: 302 SGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDD 361
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
+L M ++ +++ L+ K + EA L L+ DI P YN +ID
Sbjct: 362 ARELLSSMAAPDVV----SYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLID 417
Query: 439 GYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G C+SGN++ A + EM + PD T+T L+ G G A ++ +ML G P
Sbjct: 418 GLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKP 477
Query: 498 DEITVRILSSCLLKSGMPGEAARIKESL 525
D + L+ G +A R+ E +
Sbjct: 478 DGYAYTTRAVGELRLGDSDKAFRLHEEM 505
>AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3134107-3135930 REVERSE
LENGTH=607
Length = 607
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/325 (30%), Positives = 168/325 (51%), Gaps = 2/325 (0%)
Query: 182 VNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKF 241
+N V++ L++ K + DA +F E+ + +FN L+ G C G++DE F+
Sbjct: 238 LNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRL 297
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
+ M PD+ TY+ L++ LC+ ++D A L E+ K PN +TT+I G+
Sbjct: 298 KHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEM-CKRGLIPNDVIFTTLIHGHS 356
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
+ ++ + +M G +P+ +N+L++GF K G++ +A I M+ G PD +
Sbjct: 357 RNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKI 416
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
T+T+LI+G+CR G V L++ EM+ I FS L+ +CK R+ +A LR++
Sbjct: 417 TYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREM 476
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRA 480
R I P Y ++D +CK G+ ++ EM+ P T+ +L+ G C G+
Sbjct: 477 LRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQM 536
Query: 481 PDAIVIFYKMLATGCSPDEITVRIL 505
+A ++ ML G PD+IT L
Sbjct: 537 KNADMLLDAMLNIGVVPDDITYNTL 561
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 126/462 (27%), Positives = 215/462 (46%), Gaps = 26/462 (5%)
Query: 77 KHLTPSL-VLEVVKRLNNPILG------FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGL 129
+ + PSL V VV +N+ L F FF+F + + TY +L R L +
Sbjct: 74 RKVLPSLSVHHVVDLINHNPLSLPQRSIFAFFKFISSQPGFRFTVETYFVLARFLAVHEM 133
Query: 130 HSSAKLLYD-CMRFDGKLPDSRLLGFLVSSFA------LVDRLDVSKELLA----EAQC- 177
+ A+ L + + GK S + LV LVD L ++ L QC
Sbjct: 134 FTEAQSLIELVVSRKGKNSASSVFISLVEMRVTPMCGFLVDALMITYTDLGFIPDAIQCF 193
Query: 178 -----NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
++ V NLL ++K N + E++ + L FN+LM C
Sbjct: 194 RLSRKHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKE 253
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G++ +A K + + P +V++NTL++G C++ +D L ++ KS+ P+V +
Sbjct: 254 GNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQME-KSRTRPDVFT 312
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y+ +I+ CK +KM A LFDEM + G PN F +LI G + G +D Y+KML
Sbjct: 313 YSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKML 372
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G PD+V + +L+ G+C+ G + ++ M R + T++ LI C+ ++
Sbjct: 373 SKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVE 432
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILI 471
A ++ +++ + I ++ ++ G CK G V +A + EM KPD T+T+++
Sbjct: 433 TALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMM 492
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
C KG A + +M + G P +T +L + L K G
Sbjct: 493 DAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLG 534
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 171/331 (51%), Gaps = 1/331 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ +N+L+ C++G S A+ ++D + P L++ + V LD L +
Sbjct: 241 YVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQ 300
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ ++ + + Y L++ L K NK+D A LF E+ + F L+ G G+
Sbjct: 301 MEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGE 360
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+D + M S G PDIV YNTL++G C+ ++ AR+++ + ++ P+ +YT
Sbjct: 361 IDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGM-IRRGLRPDKITYT 419
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+I G+C+ ++ A + EMD++G + + F++L+ G K G + A ++ML
Sbjct: 420 TLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMCKEGRVIDAERALREMLRA 479
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G PD VT+T +++ +C+ G G L EM + S+ T++VL++ LCK +++ A
Sbjct: 480 GIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNA 539
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGN 445
LL + +VP YN +++G+ + N
Sbjct: 540 DMLLDAMLNIGVVPDDITYNTLLEGHHRHAN 570
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 117/247 (47%), Gaps = 1/247 (0%)
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
K +F +R ++ KL+ + E+ +G N + FN L++ F K GN+
Sbjct: 198 KHRFDVPIRGCGNLLDRMMKLNPTGTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNIS 257
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A ++ ++ P VV+F +LI GYC+VG ++ G L H+M + T+S LI
Sbjct: 258 DAQKVFDEITKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALI 317
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CK 461
+ LCK N++ A L ++ + ++P I+ +I G+ ++G +D +M K +
Sbjct: 318 NALCKENKMDGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQ 377
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
PD + L+ G C G A I M+ G PD+IT L + G A I
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEI 437
Query: 522 KESLHEN 528
++ + +N
Sbjct: 438 RKEMDQN 444
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/408 (27%), Positives = 197/408 (48%), Gaps = 3/408 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ LC+ A++ M +G PDS L++ + + +++ ++ +A
Sbjct: 288 TYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDA 347
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N + Y +L+ L + + A+ LF E + +N L+ GL + G +
Sbjct: 348 VFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMI 407
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA + N M G P++ T+N L++GLC++ V A L+K V + + P++ ++
Sbjct: 408 LEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVK-VMISKGYFPDIFTFNI 466
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I GY KM+ A + D M +G P+ +T+NSL++G K + + YK M+ G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
C P++ TF L+E CR K++ L L EM ++++ TF LI CK+ L A
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAY 586
Query: 416 DLLRQLKRTDIVPQPS-IYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAG 473
L R+++ V + YN +I + + NV A + EM ++C PD +T+ +++ G
Sbjct: 587 TLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDG 646
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
C G +M+ G P T+ + +CL EAA I
Sbjct: 647 FCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGI 694
Score = 180 bits (456), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 205/451 (45%), Gaps = 41/451 (9%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
+ ++YN ++ L G A +Y MR G PD + SF R + LL
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
++N V Y ++ + N + LF +++ S L STFN L+ LC
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG--LKSKFSPNV 290
GDV E K L+ + G P++ TYN + GLC+ E+D A ++ VG ++ P+V
Sbjct: 230 GDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGA---VRMVGCLIEQGPKPDV 286
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
+Y +I G CK SK +EA +M G +P+++T+N+LI G+ K G + A I
Sbjct: 287 ITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGD 346
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
+F+G PD T+ SLI+G C G+ N L L++E + I ++ ++ LI L
Sbjct: 347 AVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGM 406
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTI 469
+ EA L ++ ++P+ +N +++G CK G V +A+ +V M K PD FTF I
Sbjct: 407 ILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNI 466
Query: 470 LIAGH-----------------------------------CMKGRAPDAIVIFYKMLATG 494
LI G+ C + D + + M+ G
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG 526
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESL 525
C+P+ T IL L + EA + E +
Sbjct: 527 CAPNLFTFNILLESLCRYRKLDEALGLLEEM 557
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 195/388 (50%), Gaps = 3/388 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TYN L+ C+ G+ A+ + F+G +PD L+ + + L E
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
A ++ N ++Y+ L+ L + +A L E+ E TFN+L+ GLC G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
V +A + M S G PDI T+N L+HG +++ A ++L +V L + P+V +Y
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEIL-DVMLDNGVDPDVYTYN 500
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++++G CK SK ++ + M G PN FTFN L++ + +D ALG+ ++M
Sbjct: 501 SLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN-TRNISASLHTFSVLISYLCKSNRLQE 413
PD VTF +LI+G+C+ G ++ L+ +M +S+S T++++I + +
Sbjct: 561 SVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTM 620
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTILIA 472
A L +++ + P Y ++DG+CK+GNV+ ++E ME P T +I
Sbjct: 621 AEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN 680
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEI 500
C++ R +A I ++M+ G P+ +
Sbjct: 681 CLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 195/409 (47%), Gaps = 3/409 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K V + +TYN+ ++ LCQ+G A + C+ G PD L+ +
Sbjct: 244 KRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQ 303
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
++ L + ++ ++ Y+ L++ K + A + + + + + T+ L+
Sbjct: 304 EAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLI 363
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GLC G+ + A N G P+++ YNTL+ GL + A L E+ K
Sbjct: 364 DGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG-L 422
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
P V+++ +++G CK+ + +A L M G P+ FTFN LI G+ M++AL
Sbjct: 423 IPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALE 482
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
I ML +G PDV T+ SL+ G C+ K ++ + M + + +L TF++L+ LC
Sbjct: 483 ILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLC 542
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE--KCKPDK 464
+ +L EA LL ++K + P + +IDG+CK+G++D A + +MEE K
Sbjct: 543 RYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSST 602
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
T+ I+I K A +F +M+ PD T R++ K+G
Sbjct: 603 PTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTG 651
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 190/456 (41%), Gaps = 42/456 (9%)
Query: 76 GKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKL 135
G L P V V+K +P+ + F R+++ H+ TY ++ L G + +
Sbjct: 2 GPPLLPKHVTAVIKCQKDPMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEE 61
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKE---LLAEAQCNKVQVNAVVYDNLLS 192
+ MR + + + L G V + R +E + + Y+ ++S
Sbjct: 62 VLVDMREN--VGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMS 119
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSP 252
VLV D A ++ + + +F + M C A + LN M S GC
Sbjct: 120 VLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEM 179
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
++V Y T++ G +L ++ L S S + ++ ++ CK +KE L
Sbjct: 180 NVVAYCTVVGGFYEENFKAEGYELFGKM-LASGVSLCLSTFNKLLRVLCKKGDVKECEKL 238
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
D++ + G PN FT+N I G + G +D A+ + ++ G PDV+T+ +LI
Sbjct: 239 LDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLI----- 293
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
YGL CK+++ QEA L ++ + P
Sbjct: 294 -----YGL-------------------------CKNSKFQEAEVYLGKMVNEGLEPDSYT 323
Query: 433 YNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
YN +I GYCK G V A IV + + PD+FT+ LI G C +G A+ +F + L
Sbjct: 324 YNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEAL 383
Query: 492 ATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
G P+ I L L GM EAA++ + E
Sbjct: 384 GKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSE 419
Score = 125 bits (315), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 171/382 (44%), Gaps = 21/382 (5%)
Query: 31 FTLTQLTYASCDKGSITKPE-----AWFVKIVSTLFLHSNSLD--------TRVLSYF-- 75
+T L C G + E A F V F + + +D R L+ F
Sbjct: 322 YTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNE 381
Query: 76 --GKHLTPSLVL--EVVKRLNNPILGFKFFQFTRE--KLNVHHSFWTYNMLLRSLCQKGL 129
GK + P+++L ++K L+N + + Q E + + T+N+L+ LC+ G
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGC 441
Query: 130 HSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDN 189
S A L M G PD L+ ++ +++ + E+L N V + Y++
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNS 501
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
LL+ L K +K +D + ++ ++ TFN+L+ LC +DEA L M++
Sbjct: 502 LLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKS 561
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
+PD VT+ TL+ G C+ ++D A L +++ K S + +Y +I + + + A
Sbjct: 562 VNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMA 621
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
LF EM P+ +T+ ++DGF K GN++ +M+ +G P + T +I
Sbjct: 622 EKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINC 681
Query: 370 YCRVGKVNYGLDLWHEMNTRNI 391
C +V + H M + +
Sbjct: 682 LCVEDRVYEAAGIIHRMVQKGL 703
>AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10670320-10672740 REVERSE
LENGTH=806
Length = 806
Score = 180 bits (456), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/448 (26%), Positives = 212/448 (47%), Gaps = 49/448 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDS----RLLGFLVSSFALVDRLDVSKEL 171
TYN ++R C A L + M G LPD ++G+L +V+ D+ K++
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
E + + + V Y+ L+ +L KH+ D+A+ ++ ++ ++ ++ LC
Sbjct: 374 AKE---HGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCK 430
Query: 232 AGDVDEAFKFLNGMRSFG-CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
G + EA +N M S G C PD+VTY +++G CR+ EVD+A+ LL +V PN
Sbjct: 431 EGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLL-QVMHTHGHKPNT 489
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
SYT +++G C+ K EA + + + PN+ T++ ++ G + G + A + ++
Sbjct: 490 VSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVRE 549
Query: 351 MLFHG-----------------------------------CPPDVVTFTSLIEGYCRVGK 375
M+ G C +VV FT++I G+C+ +
Sbjct: 550 MVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDE 609
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
++ L + +M N A + T++ L+ L K R+ EA +L++++ I P P Y
Sbjct: 610 LDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRT 669
Query: 436 VIDGYCKSGNVDEANAIVVEM--EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
VI YC+ G VD+ AI+ +M +KC+ + +I C+ G+ +A + K+L T
Sbjct: 670 VIHRYCQMGKVDDLVAILEKMISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRT 726
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARI 521
D T L LK G+P A ++
Sbjct: 727 ASRSDAKTCYALMEGYLKKGVPLSAYKV 754
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 122/490 (24%), Positives = 210/490 (42%), Gaps = 40/490 (8%)
Query: 77 KHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLR-----SLCQ----- 126
+ L PS V V++ ++ + KFF + + H Y +L LCQ
Sbjct: 170 RSLKPSQVCAVLRSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRV 229
Query: 127 ------KGLH-------------SSAKLLYDC------MRFDGKLPDSRLLGFLVSSFAL 161
+G++ S A L D M+ G P+ + + F
Sbjct: 230 LVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVR 289
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
+RL+ + L Q + N V Y+ ++ +++++AI L ++ + +
Sbjct: 290 ANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVS 349
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGM-RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
+ +MG LC + E + M + G PD VTYNTL+H L + D A LK+
Sbjct: 350 YYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDA 409
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG-TKPNAFTFNSLIDGFVKVG 339
K F + Y+ ++ CK +M EA L +EM G P+ T+ ++++GF ++G
Sbjct: 410 QEKG-FRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLG 468
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
+D A + + M HG P+ V++T+L+ G CR GK ++ + S + T+S
Sbjct: 469 EVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYS 528
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEE 458
V++ L + +L EA D++R++ P P N ++ C+ G EA + E + +
Sbjct: 529 VIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNK 588
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
C + FT +I G C A+ + M D T L L K G EA
Sbjct: 589 GCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEA 648
Query: 519 ARI-KESLHE 527
+ K+ LH+
Sbjct: 649 TELMKKMLHK 658
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/368 (25%), Positives = 175/368 (47%), Gaps = 2/368 (0%)
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
M+ G +P+ ++ + + R++ + ELL + + V Y ++ L K +
Sbjct: 303 MQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKR 362
Query: 200 LDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
+ + L +++ + H + + T+N L+ L DEA FL + G D + Y+
Sbjct: 363 IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYS 422
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
++H LC+ + A+DL+ E+ K P+V +YT V++G+C+L ++ +A L M
Sbjct: 423 AIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHT 482
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KPN ++ +L++G + G A + H P+ +T++ ++ G R GK++
Sbjct: 483 HGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSE 542
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
D+ EM + ++L+ LC+ R EAR + + + VI
Sbjct: 543 ACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIH 602
Query: 439 GYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G+C++ +D A +++ +M K D FT+T L+ KGR +A + KML G P
Sbjct: 603 GFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDP 662
Query: 498 DEITVRIL 505
+T R +
Sbjct: 663 TPVTYRTV 670
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 128/280 (45%), Gaps = 9/280 (3%)
Query: 104 TREKLNV-HHSFWTYNMLLRSLCQKGLHSSAKLLYDC-----MRFDGKLPDSRLLGFLVS 157
RE +N+ +W+ N + S+ GL KL C M G P + L+
Sbjct: 508 AREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQ 567
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
S R +++ + E +N V + ++ ++++LD A+ + ++ + H
Sbjct: 568 SLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHA 627
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ T+ L+ L G + EA + + M G P VTY T++H C++ +VD +L
Sbjct: 628 DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAIL 687
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+++ + K Y VI C L K++EA +L ++ R+ ++ +A T +L++G++K
Sbjct: 688 EKMISRQKCRT---IYNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLK 744
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
G SA + +M PDV L + GKV+
Sbjct: 745 KGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVD 784
>AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7312262-7314493 REVERSE
LENGTH=743
Length = 743
Score = 179 bits (455), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 215/458 (46%), Gaps = 38/458 (8%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL-PDSRLLGFLVSSFALVDRL 165
K+ V + T+N+L+ C +G A + + M + K+ PD+ ++ + + RL
Sbjct: 197 KIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRL 256
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
KELL + + N + N V Y+NL+ K L +A + + +++ + T+N+L
Sbjct: 257 SDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNIL 316
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV---GL 282
+ GLC+AG + E + ++ M+S PD+VTYNTL+ G + AR L++++ G+
Sbjct: 317 INGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGV 376
Query: 283 KSK--------------------------------FSPNVRSYTTVISGYCKLSKMKEAS 310
K+ FSP++ +Y T+I Y K+ + A
Sbjct: 377 KANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGAL 436
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
+ EM + G K N T N+++D K +D A + G D VT+ +LI G+
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
R KV L++W EM I+ ++ TF+ LI LC + + A + +L + ++P
Sbjct: 497 FREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDD 556
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYK 489
S +N +I GYCK G V++A E ++ KPD +T IL+ G C +G A+ F+
Sbjct: 557 STFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN-FFN 615
Query: 490 MLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
L D +T + S K EA + + E
Sbjct: 616 TLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEE 653
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/394 (26%), Positives = 176/394 (44%), Gaps = 41/394 (10%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRL----- 151
F+ + ++ NV TYN+L+ LC G L D M+ PD
Sbjct: 294 AFQIVELMKQT-NVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLI 352
Query: 152 -----LGFLVSSFALVDRLD-----------------VSKELLAEAQCNKVQ-------- 181
LG + + L+++++ + KE EA KV+
Sbjct: 353 DGCFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGF 412
Query: 182 -VNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
+ V Y L+ +K L A+ + RE+ + + T T N ++ LC +DEA
Sbjct: 413 SPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHN 472
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
LN G D VTY TL+ G R ++V++A ++ E+ K K +P V ++ ++I G
Sbjct: 473 LLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMK-KVKITPTVSTFNSLIGGL 531
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
C K + A FDE+ SG P+ TFNS+I G+ K G ++ A Y + + H PD
Sbjct: 532 CHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDN 591
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEM-NTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
T L+ G C+ G L+ ++ + R + T++ +IS CK +L+EA DLL
Sbjct: 592 YTCNILLNGLCKEGMTEKALNFFNTLIEEREVDTV--TYNTMISAFCKDKKLKEAYDLLS 649
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
+++ + P YN I + G + E + ++
Sbjct: 650 EMEEKGLEPDRFTYNSFISLLMEDGKLSETDELL 683
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 159/348 (45%), Gaps = 5/348 (1%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC---SAGDVDEAFKF 241
++D LS + K A+ +F++++R T N L+ GL S+ + A +
Sbjct: 132 ALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREV 191
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
+ M G S ++ T+N L++G C +++ A +L+ + + K +P+ +Y T++
Sbjct: 192 FDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMS 251
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
K ++ + L +M ++G PN T+N+L+ G+ K+G++ A I + M PD+
Sbjct: 252 KKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLC 311
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
T+ LI G C G + GL+L M + + + T++ LI + EAR L+ Q+
Sbjct: 312 TYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQM 371
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE--KCKPDKFTFTILIAGHCMKGR 479
+ + +N + CK + V E+ + PD T+ LI + G
Sbjct: 372 ENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGD 431
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
A+ + +M G + IT+ + L K EA + S H+
Sbjct: 432 LSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHK 479
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 122/248 (49%), Gaps = 6/248 (2%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG---NMDSA 344
P+ + +S Y K A +F +M R KPN T N+L+ G V+ ++ SA
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLIS 403
++ M+ G +V TF L+ GYC GK+ L + M + ++ T++ ++
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKP 462
+ K RL + ++LL +K+ +VP YN+++ GYCK G++ EA IV M++ P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D T+ ILI G C G + + + M + PD +T L + G+ EA ++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368
Query: 523 ESLHENQG 530
E + EN G
Sbjct: 369 EQM-ENDG 375
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 140/299 (46%), Gaps = 16/299 (5%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T N +L +LC++ A L + G + D G L+ F ++++ + E+ E
Sbjct: 453 TLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEM 512
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ K+ +++L+ L H K + A+ F EL S + STFN ++ G C G V
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++AF+F N PD T N LL+GLC+ ++A + L + + +Y T
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN--TLIEEREVDTVTYNT 630
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+IS +CK K+KEA L EM+ G +P+ FT+NS I ++ G + + KK F G
Sbjct: 631 MISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKK--FSG 688
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGL-DLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
F S+ + N + E+NT I+ +S +I LC RL+E
Sbjct: 689 ------KFGSMKRDLQVETEKNPATSESKEELNTEAIA-----YSDVIDELCSRGRLKE 736
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/227 (21%), Positives = 92/227 (40%), Gaps = 23/227 (10%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+K+ + + T+N L+ LC G A +D + G LPD ++ + R+
Sbjct: 513 KKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRV 572
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ + E E+ + + + + LL+ L K + A+ F L+ ++T T+N +
Sbjct: 573 EKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER-EVDTVTYNTM 631
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---- 281
+ C + EA+ L+ M G PD TYN+ + L ++ +LLK+
Sbjct: 632 ISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETDELLKKFSGKFG 691
Query: 282 ------------------LKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
K + + +Y+ VI C ++KE S
Sbjct: 692 SMKRDLQVETEKNPATSESKEELNTEAIAYSDVIDELCSRGRLKEHS 738
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 179 bits (453), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 127/463 (27%), Positives = 215/463 (46%), Gaps = 34/463 (7%)
Query: 71 VLSYFGKHLTPSLVLEVVKRLN------------NPILG--------------FKFFQFT 104
V+ +GK+ P L+V KR+ N +L F +F
Sbjct: 84 VIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYF--- 140
Query: 105 REKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR 164
E V + TYN+L++ C+K A+ D M +G PD +++ A +
Sbjct: 141 -ETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGK 199
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFN 223
LD + EL E V + Y+ L+ +K A+ L+ L+ S + T N
Sbjct: 200 LDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHN 259
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+++ GL G VD+ K M+ D+ TY++L+HGLC VD+A + E+ +
Sbjct: 260 IMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELD-E 318
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
K S +V +Y T++ G+C+ K+KE+ L+ M+ + N ++N LI G ++ G +D
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDE 377
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
A I++ M G D T+ I G C G VN L + E+ + ++ ++ +I
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKP 462
LCK RL+EA +L++++ + + + N +I G + + EA+ + EM + C+P
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRP 497
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
++ ILI G C G+ +A +ML G PD T IL
Sbjct: 498 TVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSIL 540
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 194/397 (48%), Gaps = 3/397 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E +V+ + T+N+++ L + G +++ M+ + + D L+ +
Sbjct: 247 EDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNV 306
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
D ++ + E K ++ V Y+ +L + K+ +++ L+R +M + + ++N+L
Sbjct: 307 DKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWR-IMEHKNSVNIVSYNIL 365
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GL G +DEA M + G + D TY +HGLC V++A +++EV S
Sbjct: 366 IKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVE-SSG 424
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
+V +Y ++I CK +++EAS+L EM + G + N+ N+LI G ++ + A
Sbjct: 425 GHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEAS 484
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++M +GC P VV++ LI G C+ GK EM L T+S+L+ L
Sbjct: 485 FFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGL 544
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDK 464
C+ ++ A +L Q ++ + ++N +I G C G +D+A ++ ME + C +
Sbjct: 545 CRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANL 604
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
T+ L+ G G + A VI+ M G PD I+
Sbjct: 605 VTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIIS 641
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 119/457 (26%), Positives = 217/457 (47%), Gaps = 11/457 (2%)
Query: 75 FGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAK 134
F K L+P VL+++K NP F F HS Y+ +LR L + + +
Sbjct: 4 FPKSLSPKHVLKLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVS 63
Query: 135 LLYDCMRFDGKLPDSRLLGFLVSSF---ALVDR-LDVSKELLAEAQCNKVQVNAVVYDNL 190
+ + +R D + ++ ++ ++ D+ LDV K + C + Y+ L
Sbjct: 64 RIVELIRSQECKCDEDVALSVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRS---YNTL 120
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
L+ V+ + LF + T+NVL+ C + ++A FL+ M G
Sbjct: 121 LNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGF 180
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
PD+ +Y+T+++ L + ++D A +L E+ + +P+V Y +I G+ K K A
Sbjct: 181 KPDVFSYSTVINDLAKAGKLDDALELFDEMSERG-VAPDVTCYNILIDGFLKEKDHKTAM 239
Query: 311 SLFDE-MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
L+D ++ S PN T N +I G K G +D L I+++M + D+ T++SLI G
Sbjct: 240 ELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHG 299
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
C G V+ +++E++ R S + T++ ++ C+ +++E+ +L R ++ + V
Sbjct: 300 LCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNSVNI 359
Query: 430 PSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFY 488
S YN +I G ++G +DEA I M K DK T+ I I G C+ G A+ +
Sbjct: 360 VS-YNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQ 418
Query: 489 KMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
++ ++G D + CL K EA+ + + +
Sbjct: 419 EVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 178/405 (43%), Gaps = 41/405 (10%)
Query: 102 QFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFAL 161
Q REK +TY+ L+ LC G A+ +++ + D ++ F
Sbjct: 283 QNEREK-----DLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCR 337
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
++ S EL + +K VN V Y+ L+ L+++ K+D+A ++R + + +T
Sbjct: 338 CGKIKESLELWRIME-HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTT 396
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV- 280
+ + + GLC G V++A + + S G D+ Y +++ LC+ K ++ A +L+KE+
Sbjct: 397 YGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMS 456
Query: 281 ----------------GL-----------------KSKFSPNVRSYTTVISGYCKLSKMK 307
GL K+ P V SY +I G CK K
Sbjct: 457 KHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFG 516
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
EAS+ EM +G KP+ T++ L+ G + +D AL ++ + L G DV+ LI
Sbjct: 517 EASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILI 576
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
G C VGK++ + + M RN +A+L T++ L+ K A + + + +
Sbjct: 577 HGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQ 636
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
P YN ++ G C V A + P +T+ IL+
Sbjct: 637 PDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILV 681
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 1/219 (0%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N L+ L + A M +G P L+ + + + E
Sbjct: 468 NALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLE 527
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
N + + Y LL L + K+D A+ L+ + ++S + N+L+ GLCS G +D+
Sbjct: 528 NGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDD 587
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A + M C+ ++VTYNTL+ G ++ + +RA + + K P++ SY T++
Sbjct: 588 AMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYM-YKMGLQPDIISYNTIM 646
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
G C + A FD+ G P +T+N L+ V
Sbjct: 647 KGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
>AT5G21222.1 | Symbols: | protein kinase family protein |
chr5:7209422-7213700 FORWARD LENGTH=831
Length = 831
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/444 (26%), Positives = 212/444 (47%), Gaps = 21/444 (4%)
Query: 113 SFWTYNMLLRSLC-QKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
S TY L+ +L QK HS L+ + +G PD+ L ++++ + LD + ++
Sbjct: 353 SLITYTTLVTALTRQKHFHSLLSLISKVEK-NGLKPDTILFNAIINASSESGNLDQAMKI 411
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLC 230
+ + + + A ++ L+ K KL+++ L ++R T N+L+ C
Sbjct: 412 FEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPNDRTCNILVQAWC 471
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
+ ++EA+ + M+S+G PD+VT+NTL RI A D++ L +K PNV
Sbjct: 472 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIPRMLHNKVKPNV 531
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
R+ T+++GYC+ KM+EA F M G PN F FNSLI GF+ + +MD +
Sbjct: 532 RTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNINDMDGVGEVVDL 591
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
M G PDVVTF++L+ + VG + +++ +M I +H FS+L ++
Sbjct: 592 MEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFSILAKGYARAGE 651
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-----KPDKF 465
++A +L Q+++ + P IY +I G+C +G + +A + +M C P+
Sbjct: 652 PEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKM---CGIVGLSPNLT 708
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
T+ LI G + A + M P T+++++ G+
Sbjct: 709 TYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS---------- 758
Query: 526 HENQGDSLKKSYYEGTNSDVPFSV 549
+ N ++L S+ + ++P ++
Sbjct: 759 NSNDANTLGSSFSTSSKLNIPNNI 782
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 153/338 (45%), Gaps = 10/338 (2%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
L++ L++ + +A +F L+ T+ L+ L ++ + G
Sbjct: 325 LMNGLIERGRPQEAHSIFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNG 384
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
PD + +N +++ +D+A + +KE G K P ++ T+I GY K+ K+
Sbjct: 385 LKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCK----PTASTFNTLIKGYGKIGKL 440
Query: 307 KEASSLFDEMDRSGT-KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+E+S L D M R +PN T N L+ + ++ A I KM +G PDVVTF +
Sbjct: 441 EESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNT 500
Query: 366 LIEGYCRVGKVNYGLDLW-HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
L + Y R+G D+ M + ++ T +++ C+ +++EA ++K
Sbjct: 501 LAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKEL 560
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDA 483
+ P ++N +I G+ ++D +V MEE KPD TF+ L+ G
Sbjct: 561 GVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRC 620
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
I+ ML G PD IL+ ++G P +A +I
Sbjct: 621 EEIYTDMLEGGIDPDIHAFSILAKGYARAGEPEKAEQI 658
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 144/306 (47%), Gaps = 24/306 (7%)
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
K L D +F++ L + + GG + GDV K +NG+ G
Sbjct: 281 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGG-TTCGDVRSRTKLMNGLIERG------ 333
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
R +E + L E G K P++ +YTT+++ + SL +
Sbjct: 334 ----------RPQEAHSIFNTLIEEGHK----PSLITYTTLVTALTRQKHFHSLLSLISK 379
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
++++G KP+ FN++I+ + GN+D A+ I++KM GC P TF +LI+GY ++GK
Sbjct: 380 VEKNGLKPDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGK 439
Query: 376 VNYGLDLWHEM-NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
+ L M + + T ++L+ C +++EA +++ +++ + P +N
Sbjct: 440 LEESSRLLDMMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFN 499
Query: 435 HVIDGYCKSGNVDEANAIVVE--MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
+ Y + G+ A +++ + K KP+ T ++ G+C +G+ +A+ FY+M
Sbjct: 500 TLAKAYARIGSTCTAEDMIIPRMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKE 559
Query: 493 TGCSPD 498
G P+
Sbjct: 560 LGVHPN 565
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 99/243 (40%), Gaps = 36/243 (14%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
+FF +E L VH + + +N L++ + D M G PD L+
Sbjct: 550 ALRFFYRMKE-LGVHPNLFVFNSLIKGFLNINDMDGVGEVVDLMEEFGVKPDVVTFSTLM 608
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
++++ V + +E ++ +++
Sbjct: 609 NAWSSVGDMKRCEE-----------------------------------IYTDMLEGGID 633
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
+ F++L G AG+ ++A + LN MR FG P++V Y ++ G C E+ +A +
Sbjct: 634 PDIHAFSILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQV 693
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
K++ SPN+ +Y T+I G+ + + +A L +M+ P T + DG+
Sbjct: 694 YKKMCGIVGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWK 753
Query: 337 KVG 339
+G
Sbjct: 754 SIG 756
>AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:6814521-6816404 FORWARD
LENGTH=627
Length = 627
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/427 (26%), Positives = 213/427 (49%), Gaps = 6/427 (1%)
Query: 74 YFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSA 133
++ K T + +L ++ RLN + F+ ++ + + +T+N+++ LC++G A
Sbjct: 186 FYPKTETCNHILTLLSRLNRIENAWVFYA-DMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244
Query: 134 KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
K M G P LV F+L R++ ++ +++E + Q + Y+ +LS
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
+ + + + RE+ ++ ++N+L+ G + GD++ AF + + M G P
Sbjct: 305 MCNEGRASEVL---REMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPT 361
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
TYNTL+HGL +++ A L++E+ K +V +Y +I+GYC+ K+A +L
Sbjct: 362 FYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSV-TYNILINGYCQHGDAKKAFALH 420
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
DEM G +P FT+ SLI + A +++K++ G PD+V +L++G+C +
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
G ++ L EM+ +I+ T++ L+ LC + +EAR+L+ ++KR I P Y
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540
Query: 434 NHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
N +I GY K G+ A + EM P T+ L+ G A + +M +
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600
Query: 493 TGCSPDE 499
G P++
Sbjct: 601 EGIVPND 607
Score = 162 bits (410), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 182/372 (48%), Gaps = 36/372 (9%)
Query: 188 DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRS 247
+++L++L + N++++A + ++ R TFN+++ LC G + +A FL M
Sbjct: 194 NHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEV 253
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-FSPNVRSYTTVISGYCK---- 302
FG P IVTYNTL+ G ++ AR ++ E +KSK F P++++Y ++S C
Sbjct: 254 FGIKPTIVTYNTLVQGFSLRGRIEGARLIISE--MKSKGFQPDMQTYNPILSWMCNEGRA 311
Query: 303 ---LSKMKE-------------------------ASSLFDEMDRSGTKPNAFTFNSLIDG 334
L +MKE A + DEM + G P +T+N+LI G
Sbjct: 312 SEVLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHG 371
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
+++A + +++ G D VT+ LI GYC+ G L EM T I +
Sbjct: 372 LFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPT 431
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
T++ LI LC+ N+ +EA +L ++ + P + N ++DG+C GN+D A +++
Sbjct: 432 QFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLK 491
Query: 455 EMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
EM+ PD T+ L+ G C +G+ +A + +M G PD I+ L S K G
Sbjct: 492 EMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKG 551
Query: 514 MPGEAARIKESL 525
A +++ +
Sbjct: 552 DTKHAFMVRDEM 563
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 160/324 (49%), Gaps = 4/324 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN +L +C +G ++++L + M+ G +PDS L+ + L+++ E
Sbjct: 297 TYNPILSWMCNEG--RASEVLRE-MKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEM 353
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ Y+ L+ L NK++ A L RE+ L++ T+N+L+ G C GD
Sbjct: 354 VKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDA 413
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+AF + M + G P TY +L++ LCR + A +L ++V K P++ T
Sbjct: 414 KKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG-MKPDLVMMNT 472
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ G+C + M A SL EMD P+ T+N L+ G G + A + +M G
Sbjct: 473 LMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRG 532
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD +++ +LI GY + G + + EM + + +L T++ L+ L K+ + A
Sbjct: 533 IKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAE 592
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDG 439
+LLR++K IVP S + VI+
Sbjct: 593 ELLREMKSEGIVPNDSSFCSVIEA 616
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 177/379 (46%), Gaps = 41/379 (10%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV-KHNKLDDAICLFRELMRSHSHLETST- 221
RLD + LA A +K+ V L V+ + N + + LF EL+ +H LET +
Sbjct: 99 RLDFQTQCLAIAVISKLSSPKPVTQLLKEVVTSRKNSIRN---LFDELVLAHDRLETKST 155
Query: 222 --FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
F++L+ C VDEA + M+ G P T N +L L R+ ++ A +
Sbjct: 156 ILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYAD 215
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ + + NV ++ +I+ CK K+K+A M+ G KP T+N+L+ GF G
Sbjct: 216 M-YRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK-----------------VNYGL-- 380
++ A I +M G PD+ T+ ++ C G+ V+Y +
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILI 334
Query: 381 -------DL------WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
DL EM + + + +T++ LI L N+++ A L+R+++ IV
Sbjct: 335 RGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIV 394
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
YN +I+GYC+ G+ +A A+ EM + +P +FT+T LI C K + +A +
Sbjct: 395 LDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADEL 454
Query: 487 FYKMLATGCSPDEITVRIL 505
F K++ G PD + + L
Sbjct: 455 FEKVVGKGMKPDLVMMNTL 473
>AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13930379-13932493 FORWARD
LENGTH=704
Length = 704
Score = 176 bits (446), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 185/350 (52%), Gaps = 4/350 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N ++ LL L ++ + A+ L RE+ R+ + ++N ++ G C ++++A +
Sbjct: 141 NVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELA 200
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
N M+ GCS +VT+ L+ C+ ++D A LKE+ ++ YT++I G+C
Sbjct: 201 NEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMG-LEADLVVYTSLIRGFCD 259
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
++ +LFDE+ G P A T+N+LI GF K+G + A I++ M+ G P+V T
Sbjct: 260 CGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYT 319
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+T LI+G C VGK L L + M ++ + T++++I+ LCK + +A +++ +K
Sbjct: 320 YTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMK 379
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM---EEKCKPDKFTFTILIAGHCMKGR 479
+ P YN ++ G C G++DEA+ ++ M PD ++ LI G C + R
Sbjct: 380 KRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENR 439
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
A+ I+ ++ + D +T IL + LK+G +A + + + +++
Sbjct: 440 LHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSK 489
Score = 167 bits (424), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 109/339 (32%), Positives = 172/339 (50%), Gaps = 2/339 (0%)
Query: 184 AVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLN 243
A +NL++ LV+ + A +R+++ + + + + + L+ AF L
Sbjct: 72 AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLA 131
Query: 244 GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKL 303
M G + ++ +N LL GLCR E +A LL+E+ ++ P+V SY TVI G+C+
Sbjct: 132 LMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMR-RNSLMPDVFSYNTVIRGFCEG 190
Query: 304 SKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTF 363
++++A L +EM SG + T+ LID F K G MD A+G K+M F G D+V +
Sbjct: 191 KELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVY 250
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
TSLI G+C G+++ G L+ E+ R S T++ LI CK +L+EA ++ +
Sbjct: 251 TSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIE 310
Query: 424 TDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPD 482
+ P Y +IDG C G EA ++ M EK +P+ T+ I+I C G D
Sbjct: 311 RGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVAD 370
Query: 483 AIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
A+ I M PD IT IL L G EA+++
Sbjct: 371 AVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKL 409
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 173/352 (49%), Gaps = 4/352 (1%)
Query: 182 VNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKF 241
+N V LL V+ K A + +++ N+L+ GLC + +A
Sbjct: 105 INFVSLSGLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSL 164
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
L MR PD+ +YNT++ G C KE+++A +L E+ S S ++ ++ +I +C
Sbjct: 165 LREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK-GSGCSWSLVTWGILIDAFC 223
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
K KM EA EM G + + + SLI GF G +D ++ ++L G P +
Sbjct: 224 KAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAI 283
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
T+ +LI G+C++G++ +++ M R + +++T++ LI LC + +EA LL +
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRA 480
D P YN +I+ CK G V +A IV M++ + +PD T+ IL+ G C KG
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 481 PDAIVIFYKML--ATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQG 530
+A + Y ML ++ PD I+ L L K +A I + L E G
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLG 455
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/419 (26%), Positives = 201/419 (47%), Gaps = 7/419 (1%)
Query: 108 LNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDV 167
+ + Y L+R C G K L+D + G P + L+ F + +L
Sbjct: 241 MGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKE 300
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+ E+ V+ N Y L+ L K +A+ L ++ T+N+++
Sbjct: 301 ASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIIN 360
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
LC G V +A + + M+ PD +TYN LL GLC ++D A LL + S ++
Sbjct: 361 KLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYT 420
Query: 288 -PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
P+V SY +I G CK +++ +A ++D + + T N L++ +K G+++ A+
Sbjct: 421 DPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAME 480
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
++K++ + T+T++I+G+C+ G +N L +M + S+ ++ L+S LC
Sbjct: 481 LWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLC 540
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKF 465
K L +A L +++R + P +N +IDG K+G++ A +++V M PD F
Sbjct: 541 KEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLF 600
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD-EITVRILSSCLLKSGMPGEAARIKE 523
T++ LI G +AI F KM+ +G PD I +L C+ + GE ++ E
Sbjct: 601 TYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQ----GETDKLTE 655
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 111/437 (25%), Positives = 196/437 (44%), Gaps = 39/437 (8%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ +N+LL+ LC+ A L MR + +PD ++ F L+ + EL E
Sbjct: 143 YNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANE 202
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + V + L+ K K+D+A+ +E+ + + L+ G C G+
Sbjct: 203 MKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGE 262
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+D + + G SP +TYNTL+ G C++ ++ A ++ E ++ PNV +YT
Sbjct: 263 LDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIF-EFMIERGVRPNVYTYT 321
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I G C + K KEA L + M +PNA T+N +I+ K G + A+ I + M
Sbjct: 322 GLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKR 381
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM--NTRNISASLHTFSVLISYLCKSNRLQ 412
PD +T+ L+ G C G ++ L + M ++ + +++ LI LCK NRL
Sbjct: 382 RTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLH 441
Query: 413 EARD-----------------------------------LLRQLKRTDIVPQPSIYNHVI 437
+A D L +Q+ + IV Y +I
Sbjct: 442 QALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMI 501
Query: 438 DGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
DG+CK+G ++ A ++ +M + +P F + L++ C +G A +F +M
Sbjct: 502 DGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNF 561
Query: 497 PDEITVRILSSCLLKSG 513
PD ++ I+ LK+G
Sbjct: 562 PDVVSFNIMIDGSLKAG 578
Score = 140 bits (352), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 176/382 (46%), Gaps = 40/382 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+R C+ G A +++ M G P+ L+ V + + +LL
Sbjct: 284 TYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLM 343
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ NAV Y+ +++ L K + DA+ + + + + + T+N+L+GGLC+ GD+
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403
Query: 236 DEAFKFLNGM--RSFGCSPDIVTYNTLLHGLCR--------------------------- 266
DEA K L M S PD+++YN L+HGLC+
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463
Query: 267 --------IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+V++A +L K++ SK N +YT +I G+CK + A L +M
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQIS-DSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRV 522
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
S +P+ F +N L+ K G++D A ++++M PDVV+F +I+G + G +
Sbjct: 523 SELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKS 582
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L M+ +S L T+S LI+ K L EA ++ + P I + V+
Sbjct: 583 AESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLK 642
Query: 439 GYCKS-GNVDEANAIVVEMEEK 459
YC S G D+ +V ++ +K
Sbjct: 643 -YCISQGETDKLTELVKKLVDK 663
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 98/195 (50%), Gaps = 2/195 (1%)
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
++K A S+F + SG+ AF N+L+ V+ N + A Y+KML + V+ +
Sbjct: 53 QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
L+E Y ++ K + + M R + +++ ++L+ LC++ +A LLR+++R
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDA 483
++P YN VI G+C+ +++A + EM+ C T+ ILI C G+ +A
Sbjct: 172 SLMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEA 231
Query: 484 IVIFYKMLATGCSPD 498
+ +M G D
Sbjct: 232 MGFLKEMKFMGLEAD 246
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 219/425 (51%), Gaps = 5/425 (1%)
Query: 108 LNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDV 167
+ V H +T N+L+ CQ A M G PD L++ F L +R++
Sbjct: 101 MGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEE 160
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+ ++ + ++ + V+Y ++ L K+ ++ A+ LF ++ + + L+
Sbjct: 161 AMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVN 220
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
GLC++G +A L GM PD++T+N L+ + + A +L E+ ++ +
Sbjct: 221 GLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEM-IRMSIA 279
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
PN+ +YT++I+G+C + EA +F M+ G P+ + SLI+GF K +D A+ I
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+ +M G + +T+T+LI+G+ +VGK N +++ M +R + ++ T++VL+ LC
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 408 SNRLQEARDLLRQLKRTD---IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
+ ++++A + +++ + + P YN ++ G C +G +++A + +M ++
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIG 459
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
T+TI+I G C G+ +A+ +F + + G P+ +T + S L + G+ EA +
Sbjct: 460 IITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFR 519
Query: 524 SLHEN 528
+ E+
Sbjct: 520 KMKED 524
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/324 (29%), Positives = 162/324 (50%), Gaps = 2/324 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
+ ++A+ LF ++ S F L+ + D + ++ G S D+ T N
Sbjct: 52 QFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCN 111
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
L++ C+ + A L ++ +K F P++ ++T++I+G+C ++M+EA S+ ++M
Sbjct: 112 LLMNCFCQSSQPYLASSFLGKM-MKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVE 170
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KP+ + ++ID K G+++ AL ++ +M +G PDVV +TSL+ G C G+
Sbjct: 171 MGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRD 230
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L M R I + TF+ LI K + +A +L ++ R I P Y +I+
Sbjct: 231 ADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLIN 290
Query: 439 GYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G+C G VDEA + ME K C PD +T LI G C + DA+ IFY+M G +
Sbjct: 291 GFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTG 350
Query: 498 DEITVRILSSCLLKSGMPGEAARI 521
+ IT L + G P A +
Sbjct: 351 NTITYTTLIQGFGQVGKPNVAQEV 374
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 118/463 (25%), Positives = 209/463 (45%), Gaps = 33/463 (7%)
Query: 96 LGFKFFQFTREKLN-------------VHHSFWTYNML-LRSLCQKGLHS----SAKLLY 137
+ +FFQ R +L + SFW R + + GLHS A L+
Sbjct: 1 MAMRFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQFNEALDLF 60
Query: 138 DCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYD----NLL-S 192
M LP L++ A + + DV L C+ +Q+ V +D NLL +
Sbjct: 61 THMVESRPLPSIIDFTKLLNVIAKMKKFDVVINL-----CDHLQIMGVSHDLYTCNLLMN 115
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSP 252
+ ++ A ++M+ + TF L+ G C ++EA +N M G P
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKP 175
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
D+V Y T++ LC+ V+ A L ++ P+V YT++++G C + ++A SL
Sbjct: 176 DVVMYTTIIDSLCKNGHVNYALSLFDQME-NYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
M + KP+ TFN+LID FVK G A +Y +M+ P++ T+TSLI G+C
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
G V+ +++ M T+ + ++ LI+ CK ++ +A + ++ + +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
Y +I G+ + G + A + M + P+ T+ +L+ C G+ A++IF M
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQ 414
Query: 492 A---TGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGD 531
G +P+ T +L L +G +A + E + + + D
Sbjct: 415 KREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMD 457
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 156/348 (44%), Gaps = 39/348 (11%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y ++ SLC+ G + A L+D M G PD + LV+ R + LL
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMT 239
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
K++ + + ++ L+ VK K DA L+ E++R T+ L+ G C G VD
Sbjct: 240 KRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVD 299
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + M + GC PD+V Y +L++G C+ K+VD A + E+ K + N +YTT+
Sbjct: 300 EARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG-LTGNTITYTTL 358
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML---F 353
I G+ ++ K A +F M G PN T+N L+ G + AL I++ M
Sbjct: 359 IQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREM 418
Query: 354 HGCPPDVVTFTSLI-----------------------------------EGYCRVGKVNY 378
G P++ T+ L+ +G C+ GKV
Sbjct: 419 DGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKN 478
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
++L+ + ++ + ++ T++ +IS L + EA L R++K +
Sbjct: 479 AVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 247/537 (45%), Gaps = 32/537 (5%)
Query: 12 MTLSLFTRIQASKIAL--------ARCF-TLTQLTYASCDKGSITKPEAWFVKIVSTLFL 62
+ +SL+ +++ +I L +CF +L+++ G +TK + L
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 63 HSNSLDTRV---LSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNM 119
H L+ R+ L+ FG ++ + LE V + + ++ + T+N
Sbjct: 184 HGLCLEDRISEALALFG-YMVETGFLEAVALFDQMV-----------EIGLTPVVITFNT 231
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
L+ LC +G A L + M G D G +V+ + + LL++ +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
++ + V+Y ++ L K DA LF E++ T+N ++ G CS G +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ L M +PD++T+N L+ + ++ A L E+ + F P+ +Y ++I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYG 410
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+CK ++ +A +FD M P+ TFN++ID + + +D + + +++ G +
Sbjct: 411 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
T+ +LI G+C V +N DL+ EM + + T ++L+ C++ +L+EA +L
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKG 478
++ + I YN +I G CK VDEA + + +PD T+ ++I+G C K
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN--QGDSL 533
DA V+F+KM G PD T L LK+G ++ + + N GD+
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 171 bits (434), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/496 (25%), Positives = 224/496 (45%), Gaps = 35/496 (7%)
Query: 32 TLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRL 91
T L + C + I++ A F +V T FL + +L +++ LTP VV
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI---GLTP-----VVITF 229
Query: 92 NNPILGFKFFQFTREKL---------NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRF 142
N I G E +H TY ++ +C+ G SA L M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 143 DGKLPDSRLLGFLVSSFALVDRL------DVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
PD +V A++DRL ++ L +E + N Y+ ++
Sbjct: 290 THIKPD------VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 197 HNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVT 256
+ DA L R+++ + + TFN L+ G + EA K + M PD VT
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
YN++++G C+ D A+ + + SP+V ++ T+I YC+ ++ E L E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
R G N T+N+LI GF +V N+++A ++++M+ HG PD +T L+ G+C K+
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
L+L+ + I ++++I +CK +++ EA DL L + P YN +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 437 IDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I G+C + +AN + +M++ +PD T+ LI G G +I + +M + G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 496 SPDEITVRILSSCLLK 511
S D T+++ + +
Sbjct: 639 SGDAFTIKMAEEIICR 654
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/354 (28%), Positives = 169/354 (47%), Gaps = 29/354 (8%)
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
D + S+ CNKV + V V+ N+ D AI L+R++ L +F
Sbjct: 95 DYMVRSRPFYTAVDCNKV----------IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC---RIKEVDRARDLLKE 279
N+L+ C + + + G PD+VT+NTLLHGLC RI E + E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204
Query: 280 VG-----------LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
G ++ +P V ++ T+I+G C ++ EA++L ++M G + T+
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
++++G K+G+ SAL + KM PDVV ++++I+ C+ G + L+ EM
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
+ I+ ++ T++ +I C R +A+ LLR + +I P +N +I K G + E
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384
Query: 449 ANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
A + EM +C PD T+ +I G C R DA +F M SPD +T
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 434
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
++ F ++R DV+ L + + ++ +N ++ L+ +KL ++ F +L +
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 215 SHLETSTFNVLM------------------------------------------------ 226
+ TFN L+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 227 --GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
GLC G V EA +N M G D+VTY T+++G+C++ + A +LL ++ ++
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ET 290
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
P+V Y+ +I CK +A LF EM G PN FT+N +IDGF G A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+ + M+ PDV+TF +LI + GK+ L EM R I T++ +I
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
CK NR +A+ + + D+V +N +ID YC++ VDE ++ E+ + +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
T+ LI G C A +F +M++ G PD IT IL
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 5/304 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+ + ++G A+ L D M PD+ ++ F +R D +K +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V V ++ ++ V + ++D+ + L RE+ R T+T+N L+ G C ++
Sbjct: 428 ASPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ A M S G PD +T N LL+G C ++++ A +L EV SK + +Y
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNI 542
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G CK SK+ EA LF + G +P+ T+N +I GF + A ++ KM +G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD T+ +LI G + G+++ ++L EM + S T + +C+ + +
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIE 662
Query: 416 DLLR 419
+ LR
Sbjct: 663 NYLR 666
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 16/237 (6%)
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
SG + +A FD M RS A N +I FV++ D A+ +Y+KM P
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR-- 415
++ +F LI+ +C K+++ L + ++ + TF+ L+ LC +R+ EA
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 416 -------------DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CK 461
L Q+ + P +N +I+G C G V EA A+V +M K
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
D T+ ++ G C G A+ + KM T PD + + L K G +A
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 174 bits (442), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 133/537 (24%), Positives = 247/537 (45%), Gaps = 32/537 (5%)
Query: 12 MTLSLFTRIQASKIAL--------ARCF-TLTQLTYASCDKGSITKPEAWFVKIVSTLFL 62
+ +SL+ +++ +I L +CF +L+++ G +TK + L
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 63 HSNSLDTRV---LSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNM 119
H L+ R+ L+ FG ++ + LE V + + ++ + T+N
Sbjct: 184 HGLCLEDRISEALALFG-YMVETGFLEAVALFDQMV-----------EIGLTPVVITFNT 231
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
L+ LC +G A L + M G D G +V+ + + LL++ +
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 291
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
++ + V+Y ++ L K DA LF E++ T+N ++ G CS G +A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ L M +PD++T+N L+ + ++ A L E+ + F P+ +Y ++I G
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIF-PDTVTYNSMIYG 410
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+CK ++ +A +FD M P+ TFN++ID + + +D + + +++ G +
Sbjct: 411 FCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
T+ +LI G+C V +N DL+ EM + + T ++L+ C++ +L+EA +L
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKG 478
++ + I YN +I G CK VDEA + + +PD T+ ++I+G C K
Sbjct: 527 VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKS 586
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN--QGDSL 533
DA V+F+KM G PD T L LK+G ++ + + N GD+
Sbjct: 587 AISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAF 643
Score = 172 bits (437), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 128/491 (26%), Positives = 224/491 (45%), Gaps = 35/491 (7%)
Query: 32 TLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRL 91
T L + C + I++ A F +V T FL + +L +++ LTP VV
Sbjct: 178 TFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI---GLTP-----VVITF 229
Query: 92 NNPILGFKFFQFTREKL---------NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRF 142
N I G E +H TY ++ +C+ G SA L M
Sbjct: 230 NTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEE 289
Query: 143 DGKLPDSRLLGFLVSSFALVDRL------DVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
PD +V A++DRL ++ L +E + N Y+ ++
Sbjct: 290 THIKPD------VVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343
Query: 197 HNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVT 256
+ DA L R+++ + + TFN L+ G + EA K + M PD VT
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
YN++++G C+ D A+ + + SP+V ++ T+I YC+ ++ E L E+
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
R G N T+N+LI GF +V N+++A ++++M+ HG PD +T L+ G+C K+
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
L+L+ + I ++++I +CK +++ EA DL L + P YN +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578
Query: 437 IDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I G+C + +AN + +M++ +PD T+ LI G G +I + +M + G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638
Query: 496 SPDEITVRILS 506
S D T+++++
Sbjct: 639 SGDAFTIKMVA 649
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 167/353 (47%), Gaps = 37/353 (10%)
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
S+ CNKV + V V+ N+ D AI L+R++ L +FN+L+
Sbjct: 100 SRPFYTAVDCNKV----------IGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIK 149
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR------------- 274
C + + + G PD+VT+NTLLHGLC + A
Sbjct: 150 CFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLE 209
Query: 275 -----DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
D + E+GL +P V ++ T+I+G C ++ EA++L ++M G + T+
Sbjct: 210 AVALFDQMVEIGL----TPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
++++G K+G+ SAL + KM PDVV ++++I+ C+ G + L+ EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
I+ ++ T++ +I C R +A+ LLR + +I P +N +I K G + EA
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEA 385
Query: 450 NAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ EM +C PD T+ +I G C R DA +F M SPD +T
Sbjct: 386 EKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVT 434
Score = 145 bits (365), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 175/402 (43%), Gaps = 56/402 (13%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
++ F ++R DV+ L + + ++ +N ++ L+ +KL ++ F +L +
Sbjct: 112 VIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLG 171
Query: 215 SHLETSTFNVLM------------------------------------------------ 226
+ TFN L+
Sbjct: 172 FQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVITFNT 231
Query: 227 --GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
GLC G V EA +N M G D+VTY T+++G+C++ + A +LL ++ ++
Sbjct: 232 LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME-ET 290
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
P+V Y+ +I CK +A LF EM G PN FT+N +IDGF G A
Sbjct: 291 HIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDA 350
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+ + M+ PDV+TF +LI + GK+ L EM R I T++ +I
Sbjct: 351 QRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYG 410
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPD 463
CK NR +A+ + + D+V +N +ID YC++ VDE ++ E+ + +
Sbjct: 411 FCKHNRFDDAKHMFDLMASPDVVT----FNTIIDVYCRAKRVDEGMQLLREISRRGLVAN 466
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
T+ LI G C A +F +M++ G PD IT IL
Sbjct: 467 TTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 508
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 145/299 (48%), Gaps = 6/299 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+ + ++G A+ L D M PD+ ++ F +R D +K +
Sbjct: 368 TFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM 427
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V V ++ ++ V + ++D+ + L RE+ R T+T+N L+ G C ++
Sbjct: 428 ASPDV----VTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNL 483
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ A M S G PD +T N LL+G C ++++ A +L EV SK + +Y
Sbjct: 484 NAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELF-EVIQMSKIDLDTVAYNI 542
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G CK SK+ EA LF + G +P+ T+N +I GF + A ++ KM +G
Sbjct: 543 IIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNG 602
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
PD T+ +LI G + G+++ ++L EM + S T +++ L RL ++
Sbjct: 603 HEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIK-MVADLITDGRLDKS 660
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 102/237 (43%), Gaps = 16/237 (6%)
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
SG + +A FD M RS A N +I FV++ D A+ +Y+KM P
Sbjct: 79 SGSHYFKSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIP 138
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR-- 415
++ +F LI+ +C K+++ L + ++ + TF+ L+ LC +R+ EA
Sbjct: 139 LNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALAL 198
Query: 416 -------------DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CK 461
L Q+ + P +N +I+G C G V EA A+V +M K
Sbjct: 199 FGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLH 258
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
D T+ ++ G C G A+ + KM T PD + + L K G +A
Sbjct: 259 IDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDA 315
>AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23208247-23209893 REVERSE
LENGTH=548
Length = 548
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 210/398 (52%), Gaps = 2/398 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E L + + +T+N+++ C S A + M G PD +G LV+ F +R+
Sbjct: 112 EVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRV 171
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ L+ + + + V Y+ ++ L K +++DA F+E+ R T+ L
Sbjct: 172 SDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTAL 231
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC++ +A + L+ M +P+++TY+ LL + +V A++L +E+ ++
Sbjct: 232 VNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEM-VRMS 290
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
P++ +Y+++I+G C ++ EA+ +FD M G + ++N+LI+GF K ++ +
Sbjct: 291 IDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGM 350
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++++M G + VT+ +LI+G+ + G V+ + + +M+ IS + T+++L+ L
Sbjct: 351 KLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGL 410
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDK 464
C + L++A + +++ ++ Y VI G CK+G V+EA ++ + K KPD
Sbjct: 411 CDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDI 470
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
T+T +++G C KG + ++ KM G ++ T+
Sbjct: 471 VTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTL 508
Score = 172 bits (435), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 189/369 (51%), Gaps = 5/369 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
+ V +L++ + N++ DA+ L +++ + +N ++ LC V++AF F
Sbjct: 154 DRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFF 213
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
+ G P++VTY L++GLC A LL ++ +K K +PNV +Y+ ++ + K
Sbjct: 214 KEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDM-IKKKITPNVITYSALLDAFVK 272
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
K+ EA LF+EM R P+ T++SLI+G +D A ++ M+ GC DVV+
Sbjct: 273 NGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVS 332
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+ +LI G+C+ +V G+ L+ EM+ R + ++ T++ LI ++ + +A++ Q+
Sbjct: 333 YNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMD 392
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAP 481
I P YN ++ G C +G +++A I +M+++ D T+T +I G C G+
Sbjct: 393 FFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVE 452
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYEGT 541
+A +F + G PD +T + S L G+ E + + + + L K+ +
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ---EGLMKNDCTLS 509
Query: 542 NSDVPFSVH 550
+ D+ S
Sbjct: 510 DGDITLSAE 518
Score = 159 bits (403), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 177/370 (47%), Gaps = 37/370 (10%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V ++ LLS +VK K D I L +++ + TFN+++ C V A L
Sbjct: 86 VDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGK 145
Query: 245 MRSFGCSPDIVTYNTLLHG-----------------------------------LCRIKE 269
M G PD VT +L++G LC+ K
Sbjct: 146 MLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKR 205
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
V+ A D KE+ K PNV +YT +++G C S+ +A+ L +M + PN T++
Sbjct: 206 VNDAFDFFKEIERKG-IRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYS 264
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
+L+D FVK G + A ++++M+ PD+VT++SLI G C +++ ++ M ++
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSK 324
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
A + +++ LI+ CK+ R+++ L R++ + +V YN +I G+ ++G+VD+A
Sbjct: 325 GCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKA 384
Query: 450 NAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
+M+ PD +T+ IL+ G C G A+VIF M D +T +
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 509 LLKSGMPGEA 518
+ K+G EA
Sbjct: 445 MCKTGKVEEA 454
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 159/316 (50%), Gaps = 2/316 (0%)
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
KL+DAI LF ++++S FN L+ + D M G D+ T+N
Sbjct: 65 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+++ C +V A +L ++ LK + P+ + ++++G+C+ +++ +A SL D+M
Sbjct: 125 IVINCFCCCFQVSLALSILGKM-LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVE 183
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KP+ +N++ID K ++ A +K++ G P+VVT+T+L+ G C + +
Sbjct: 184 IGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L +M + I+ ++ T+S L+ K+ ++ EA++L ++ R I P Y+ +I+
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303
Query: 439 GYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
G C +DEAN + M K C D ++ LI G C R D + +F +M G
Sbjct: 304 GLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVS 363
Query: 498 DEITVRILSSCLLKSG 513
+ +T L ++G
Sbjct: 364 NTVTYNTLIQGFFQAG 379
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 150/311 (48%), Gaps = 5/311 (1%)
Query: 89 KRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPD 148
KR+N+ F FF+ E+ + + TY L+ LC S A L M P+
Sbjct: 204 KRVND---AFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPN 259
Query: 149 SRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
L+ +F ++ +KEL E + + V Y +L++ L H+++D+A +F
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
++ + ++N L+ G C A V++ K M G + VTYNTL+ G +
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+VD+A++ ++ SP++ +Y ++ G C ++++A +F++M + + T+
Sbjct: 380 DVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
++I G K G ++ A ++ + G PD+VT+T+++ G C G ++ L+ +M
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498
Query: 389 RNISASLHTFS 399
+ + T S
Sbjct: 499 EGLMKNDCTLS 509
>AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:890428-892410 REVERSE
LENGTH=660
Length = 660
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 133/489 (27%), Positives = 235/489 (48%), Gaps = 18/489 (3%)
Query: 49 PEAWFVKIVSTLFLHSNSLDTRVLSYFGK---HLTPSLVLEVVKR---LNNPILGFKFFQ 102
P W +I++ L S S+++ + + K L+P+ V V+K P + + FF
Sbjct: 82 PSPWVSQILN-LLDGSASMESNLDGFCRKFLIKLSPNFVSFVLKSDEIREKPDIAWSFFC 140
Query: 103 FTREKLNVHHSFWTYNMLLRSLC-QKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFAL 161
++R++ H+ Y L+ L K + + + +F+ + S L+ SF
Sbjct: 141 WSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVS-AANALIKSFG- 198
Query: 162 VDRLDVSKELL---AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
+L + +ELL + + N ++ Y+ L++ LV +D A +F + +
Sbjct: 199 --KLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPD 256
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
T+N ++ G C AG +A + L M + G D +TY T++ + L +
Sbjct: 257 IVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQ 316
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
E+ K P +++ VI G CK K+ E ++F+ M R G+KPN + LIDG+ K
Sbjct: 317 EMDEKGIQVPP-HAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKS 375
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
G+++ A+ + +M+ G PDVVT++ ++ G C+ G+V LD +H ++ + +
Sbjct: 376 GSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFY 435
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
S LI L K+ R+ EA L ++ YN +ID + K VDEA A+ MEE
Sbjct: 436 SSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEE 495
Query: 459 K--CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPG 516
+ C +T+TIL++G + R +A+ ++ M+ G +P R LS+ L SG
Sbjct: 496 EEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVA 555
Query: 517 EAARIKESL 525
A +I + L
Sbjct: 556 RACKILDEL 564
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 176/382 (46%), Gaps = 6/382 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN +++ C+ G A M G D ++ + L E
Sbjct: 259 TYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEM 318
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+QV + ++ L K KL++ +F ++R S + + VL+ G +G V
Sbjct: 319 DEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSV 378
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++A + L+ M G PD+VTY+ +++GLC+ V+ A D + N Y++
Sbjct: 379 EDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG-LAINSMFYSS 437
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH- 354
+I G K ++ EA LF+EM G +++ +N+LID F K +D A+ ++K+M
Sbjct: 438 LIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEE 497
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
GC V T+T L+ G + + L LW M + I+ + F L + LC S ++ A
Sbjct: 498 GCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARA 557
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK--PDKFTFTILIA 472
+L +L ++ + + +I+ CK+G + EA + + E+ + P + T++I
Sbjct: 558 CKILDELAPMGVILDAACED-MINTLCKAGRIKEACKLADGITERGREVPGRIR-TVMIN 615
Query: 473 GHCMKGRAPDAIVIFYKMLATG 494
G+A A+ + + + G
Sbjct: 616 ALRKVGKADLAMKLMHSKIGIG 637
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 148/307 (48%), Gaps = 37/307 (12%)
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
Y +L+ L K+VDR R + E+ K +F V + +I + KL ++E ++ +M
Sbjct: 155 YVSLVDVLALAKDVDRIRFVSSEIK-KFEFPMTVSAANALIKSFGKLGMVEELLWVWRKM 213
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
+G +P +T+N L++G V +DSA +++ M PD+VT+ ++I+GYC+ G+
Sbjct: 214 KENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQT 273
Query: 377 NYGLD-----------------------------------LWHEMNTRNISASLHTFSVL 401
++ L+ EM+ + I H FS++
Sbjct: 274 QKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLV 333
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKC 460
I LCK +L E + + R P +IY +IDGY KSG+V++A ++ M +E
Sbjct: 334 IGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDEGF 393
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR 520
KPD T+++++ G C GR +A+ F+ G + + + L L K+G EA R
Sbjct: 394 KPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAER 453
Query: 521 IKESLHE 527
+ E + E
Sbjct: 454 LFEEMSE 460
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 201/414 (48%), Gaps = 7/414 (1%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
+ + YN L+ L + A+ M +G P++ G +S + +
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
+ + E + V N V+ L++ K K+ +A +R ++ + T+ VLM GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
VD+A + MR G +PD+ +Y L++G ++ + +A + E+ ++ +PN
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM-VEEGLTPN 661
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V Y ++ G+C+ ++++A L DEM G PNA T+ ++IDG+ K G++ A ++
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+M G PD +T+L++G CR+ V + ++ N + ++S F+ LI+++ K
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFKFG 780
Query: 410 RLQEARDLLRQLKRTDI----VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDK 464
+ + ++L +L P YN +ID CK GN++ A + +M+ P
Sbjct: 781 KTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
T+T L+ G+ GR + +F + +A G PD I ++ + LK GM +A
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/432 (25%), Positives = 201/432 (46%), Gaps = 8/432 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+K N+ S +TY +++ +C G A + M G P+ + L+ +F R
Sbjct: 409 KKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRF 468
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ +L E + + + Y++L+ L K ++D+A E++ + T+
Sbjct: 469 GDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAF 528
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G A + A K++ MR G P+ V L++ C+ +V A + + +
Sbjct: 529 ISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSM-VDQG 587
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
+ ++YT +++G K K+ +A +F EM G P+ F++ LI+GF K+GNM A
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
I+ +M+ G P+V+ + L+ G+CR G++ +L EM+ + + + T+ +I
Sbjct: 648 SIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGY 707
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF 465
CKS L EA L ++K +VP +Y ++DG C+ +V+ A I ++ C
Sbjct: 708 CKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA 767
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATG----CSPDEITVRILSSCLLKSGMPGEAARI 521
F LI G+ + +++ P+++T I+ L K G EAA
Sbjct: 768 PFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNL-EAA-- 824
Query: 522 KESLHENQGDSL 533
KE H+ Q +L
Sbjct: 825 KELFHQMQNANL 836
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 194/436 (44%), Gaps = 53/436 (12%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TY + + +SA MR G LP+ L L++ + ++ +
Sbjct: 523 FTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRS 582
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ +A Y L++ L K++K+DDA +FRE+ + ++ VL+ G G+
Sbjct: 583 MVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGN 642
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ +A + M G +P+++ YN LL G CR E+++A++LL E+ +K PN +Y
Sbjct: 643 MQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAVTYC 701
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY---KKM 351
T+I GYCK + EA LFDEM G P++F + +L+DG ++ +++ A+ I+ KK
Sbjct: 702 TIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKK- 760
Query: 352 LFHGCP---------------------------------------PDVVTFTSLIEGYCR 372
GC P+ VT+ +I+ C+
Sbjct: 761 ---GCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCK 817
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
G + +L+H+M N+ ++ T++ L++ K R E + + I P +
Sbjct: 818 EGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIM 877
Query: 433 YNHVIDGYCKSGNVDEANAIVVEM------EEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
Y+ +I+ + K G +A +V +M ++ CK T L++G G A +
Sbjct: 878 YSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKV 937
Query: 487 FYKMLATGCSPDEITV 502
M+ PD TV
Sbjct: 938 MENMVRLQYIPDSATV 953
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 209/455 (45%), Gaps = 22/455 (4%)
Query: 73 SYFGKHLTPSL-----VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQK 127
S G L P L +L+ + R N L + ++ E+ NV TY+ML+ + C+
Sbjct: 176 SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVER-NVVFDVKTYHMLIIAHCRA 234
Query: 128 GLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVY 187
G + +L D + K F ++ + L + + ++ C + Y
Sbjct: 235 G---NVQLGKDVLFKTEK-------EFRTATLNVDGALKLKESMI----CKGLVPLKYTY 280
Query: 188 DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRS 247
D L+ L K +L+DA L E+ L+ T+++L+ GL + D A ++ M S
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMK 307
G + Y+ + + + +++A+ L + + S P ++Y ++I GYC+ ++
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGM-IASGLIPQAQAYASLIEGYCREKNVR 399
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
+ L EM + + +T+ +++ G G++D A I K+M+ GC P+VV +T+LI
Sbjct: 400 QGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLI 459
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
+ + + + + + EM + I+ + ++ LI L K+ R+ EAR L ++ +
Sbjct: 460 KTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLK 519
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVI 486
P Y I GY ++ A+ V EM E P+K T LI +C KG+ +A
Sbjct: 520 PNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSA 579
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ M+ G D T +L + L K+ +A I
Sbjct: 580 YRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI 614
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 126/544 (23%), Positives = 215/544 (39%), Gaps = 90/544 (16%)
Query: 18 TRIQASKIALARCFTLT--QLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYF 75
T + + L R F++ +L+ AS + I K E W DT V S
Sbjct: 11 TLVTRANFLLFRSFSVNVEKLSDASAEIAGILKQENW--------------RDTLVSSNL 56
Query: 76 GKHLTPSLVLEVV--KRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSA 133
+ P +VL V+ KR+++P FF + + +++ L LC G A
Sbjct: 57 SIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDSQKVTEQKLDSFSFLALDLCNFGSFEKA 116
Query: 134 KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
+ + M + P + + +V S+E + ++ + V++ L
Sbjct: 117 LSVVERM-IERNWPVAEVWSSIVRC---------SQEFVGKSD------DGVLFGILFDG 160
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
+ +++A+ +F M S VL+ L +D + GM D
Sbjct: 161 YIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220
Query: 254 IVTYNTLLHGLCRIKEVDRARDL--------------------LKEVGLKSKFSPNVRSY 293
+ TY+ L+ CR V +D+ LKE + P +Y
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTY 280
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
+I G CK+ ++++A SL EMD G + T++ LIDG +K N D+A G+ +M+
Sbjct: 281 DVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVS 340
Query: 354 HGCP-----------------------------------PDVVTFTSLIEGYCRVGKVNY 378
HG P + SLIEGYCR V
Sbjct: 341 HGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQ 400
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
G +L EM RNI S +T+ ++ +C S L A ++++++ + P IY +I
Sbjct: 401 GYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIK 460
Query: 439 GYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
+ ++ +A ++ EM+E+ PD F + LI G R +A +M+ G P
Sbjct: 461 TFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKP 520
Query: 498 DEIT 501
+ T
Sbjct: 521 NAFT 524
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 161/380 (42%), Gaps = 43/380 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L+ L + A+ ++ MR G PD G L++ F+ + + + + E
Sbjct: 594 TYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEM 653
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N ++Y+ LL + +++ A L E+ H T+ ++ G C +GD+
Sbjct: 654 VEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDL 713
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA---------------------- 273
EAF+ + M+ G PD Y TL+ G CR+ +V+RA
Sbjct: 714 AEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALI 773
Query: 274 --------RDLLKEV------GLKSKFS-PNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+L EV G +F PN +Y +I CK ++ A LF +M
Sbjct: 774 NWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQN 833
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
+ P T+ SL++G+ K+G ++ + + G PD + ++ +I + + G
Sbjct: 834 ANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTK 893
Query: 379 GLDLWHEMNTRNI-----SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
L L +M +N S+ T L+S K ++ A ++ + R +P +
Sbjct: 894 ALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATV 953
Query: 434 NHVIDGYCKSGNVD-EANAI 452
+I+ C S N EA+A+
Sbjct: 954 IELINESCISSNQRVEADAV 973
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 27/211 (12%)
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
F G D V F L +GY G + + ++ + L VL+ L + NRL
Sbjct: 144 FVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLD 203
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK------------- 459
D+ + + ++V Y+ +I +C++GNV ++ + E++
Sbjct: 204 LFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALK 263
Query: 460 ------CK---PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
CK P K+T+ +LI G C R DA + +M + G S D T +L LL
Sbjct: 264 LKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLL 323
Query: 511 KSGMPGEAARIKESLHE--NQGDSLKKSYYE 539
K G +AA K +HE + G ++K Y+
Sbjct: 324 K-GRNADAA--KGLVHEMVSHGINIKPYMYD 351
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 116/408 (28%), Positives = 193/408 (47%), Gaps = 10/408 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPD----SRLLGFLVSSFALVDRLDVSKEL 171
Y++L+R ++G+ + ++ M G P + +LG +V S V KE+
Sbjct: 165 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 224
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
L C V ++ L++VL + + L +++ +S T+N ++ C
Sbjct: 225 LKRKICPDV----ATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G A + L+ M+S G D+ TYN L+H LCR + + LL+++ K PN
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM-RKRMIHPNEV 339
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y T+I+G+ K+ AS L +EM G PN TFN+LIDG + GN AL ++ M
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 399
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
G P V++ L++G C+ + + + M + T++ +I LCK+ L
Sbjct: 400 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 459
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTIL 470
EA LL ++ + I P Y+ +I+G+CK G A IV + P+ ++ L
Sbjct: 460 DEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTL 519
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
I C G +AI I+ M+ G + D T +L + L K+G EA
Sbjct: 520 IYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEA 567
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 117/417 (28%), Positives = 195/417 (46%), Gaps = 2/417 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
EK + TYN +L C+KG +A L D M+ G D L+ +R+
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
LL + + + N V Y+ L++ K+ A L E++ TFN L
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G S G+ EA K M + G +P V+Y LL GLC+ E D AR + ++
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMK-RNG 438
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
+YT +I G CK + EA L +EM + G P+ T+++LI+GF KVG +A
Sbjct: 439 VCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAK 498
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
I ++ G P+ + +++LI CR+G + + ++ M + TF+VL++ L
Sbjct: 499 EIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSL 558
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDK 464
CK+ ++ EA + +R + I+P ++ +I+GY SG +A ++ EM + P
Sbjct: 559 CKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTF 618
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
FT+ L+ G C G +A + A + D + L + + KSG +A +
Sbjct: 619 FTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSL 675
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 121/467 (25%), Positives = 217/467 (46%), Gaps = 13/467 (2%)
Query: 62 LHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLL 121
+ S +D V +Y ++++ + R N G+ + R+++ +H + TYN L+
Sbjct: 294 MKSKGVDADVCTY-------NMLIHDLCRSNRIAKGYLLLRDMRKRM-IHPNEVTYNTLI 345
Query: 122 RSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKV 180
+G + +++LL + + F G P+ L+ + ++ + +
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSF-GLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGL 404
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
+ V Y LL L K+ + D A + + R+ + T+ ++ GLC G +DEA
Sbjct: 405 TPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVV 464
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
LN M G PDIVTY+ L++G C++ A++++ + + SPN Y+T+I
Sbjct: 465 LLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI-YRVGLSPNGIIYSTLIYNC 523
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
C++ +KEA +++ M G + FTFN L+ K G + A + M G P+
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
V+F LI GY G+ ++ EM + T+ L+ LCK L+EA L+
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGR 479
L +YN ++ CKSGN+ +A ++ EM ++ PD +T+T LI+G C KG+
Sbjct: 644 LHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGK 703
Query: 480 APDAIVIFYKMLATG-CSPDEITVRILSSCLLKSGMPGEAARIKESL 525
AI+ + A G P+++ + K+G +E +
Sbjct: 704 TVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQM 750
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/386 (28%), Positives = 182/386 (47%), Gaps = 42/386 (10%)
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR---------------------------- 208
CN N VYD L+ V ++ + D++ +FR
Sbjct: 159 CNS---NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDV 215
Query: 209 -------ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
E+++ + +TFN+L+ LC+ G +++ + M G +P IVTYNT+L
Sbjct: 216 SVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVL 275
Query: 262 HGLCRIKEVDRARDLLKEVGLKSK-FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
H C+ A +LL +KSK +V +Y +I C+ +++ + L +M +
Sbjct: 276 HWYCKKGRFKAAIELLDH--MKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRM 333
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
PN T+N+LI+GF G + A + +ML G P+ VTF +LI+G+ G L
Sbjct: 334 IHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEAL 393
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+++ M + ++ S ++ VL+ LCK+ AR ++KR + Y +IDG
Sbjct: 394 KMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGL 453
Query: 441 CKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
CK+G +DEA ++ EM ++ PD T++ LI G C GR A I ++ G SP+
Sbjct: 454 CKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNG 513
Query: 500 ITVRILSSCLLKSGMPGEAARIKESL 525
I L + G EA RI E++
Sbjct: 514 IIYSTLIYNCCRMGCLKEAIRIYEAM 539
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 182/440 (41%), Gaps = 36/440 (8%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+N+L+ SLC+ G + A+ CM DG LP++ L++ + + + E
Sbjct: 549 FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDE 608
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
Y +LL L K L +A + L + ++T +N L+ +C +G+
Sbjct: 609 MTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGN 668
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ +A M PD TY +L+ GLCR + A KE + PN YT
Sbjct: 669 LAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYT 728
Query: 295 -----------------------------------TVISGYCKLSKMKEASSLFDEMDRS 319
+I GY ++ K+++ + L EM
Sbjct: 729 CFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQ 788
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
PN T+N L+ G+ K ++ ++ +Y+ ++ +G PD +T SL+ G C + G
Sbjct: 789 NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIG 848
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
L + R + +TF++LIS C + + A DL++ + I + ++
Sbjct: 849 LKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSV 908
Query: 440 YCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
++ E+ ++ EM ++ P+ + LI G C G A V+ +M+A P
Sbjct: 909 LNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPP 968
Query: 499 EITVRILSSCLLKSGMPGEA 518
+ + L K G EA
Sbjct: 969 NVAESAMVRALAKCGKADEA 988
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 136/303 (44%), Gaps = 51/303 (16%)
Query: 262 HGLCRIKEVDRARDLLKEVGL---KSKF------------SPNVRSYTTVISGYCKLSKM 306
H L R + D AR +LKE+ L KS F + N Y +I Y + +
Sbjct: 120 HILVRARMYDPARHILKELSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMI 179
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+++ +F M G P+ +T N+++ VK G S K+ML PDV TF L
Sbjct: 180 QDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNIL 239
Query: 367 I-----EG------------------------------YCRVGKVNYGLDLWHEMNTRNI 391
I EG YC+ G+ ++L M ++ +
Sbjct: 240 INVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGV 299
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
A + T+++LI LC+SNR+ + LLR +++ I P YN +I+G+ G V A+
Sbjct: 300 DADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQ 359
Query: 452 IVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
++ EM P+ TF LI GH +G +A+ +FY M A G +P E++ +L L
Sbjct: 360 LLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLC 419
Query: 511 KSG 513
K+
Sbjct: 420 KNA 422
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 139/324 (42%), Gaps = 36/324 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+LL ++ S++ LLY + +G LPD LV + L++ ++L
Sbjct: 796 TYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAF 855
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
C V+V + TFN+L+ C+ G++
Sbjct: 856 ICRGVEV-----------------------------------DRYTFNMLISKCCANGEI 880
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ AF + M S G S D T + ++ L R +R +L E+ K SP R Y
Sbjct: 881 NWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMS-KQGISPESRKYIG 939
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+G C++ +K A + +EM P ++++ K G D A + + ML
Sbjct: 940 LINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMK 999
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P + +FT+L+ C+ G V L+L M+ + L +++VLI+ LC + A
Sbjct: 1000 LVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAF 1059
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDG 439
+L ++K + + Y +I G
Sbjct: 1060 ELYEEMKGDGFLANATTYKALIRG 1083
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 107/255 (41%), Gaps = 36/255 (14%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+T+NML+ C G + A F LV + L +
Sbjct: 865 YTFNMLISKCCANGEINWA-------------------------FDLVKVMTSLGISLDK 899
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
C D ++SVL ++++ ++ + E+ + E+ + L+ GLC GD
Sbjct: 900 DTC----------DAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGD 949
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ AF M + P V + ++ L + + D A LL+ + LK K P + S+T
Sbjct: 950 IKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFM-LKMKLVPTIASFT 1008
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T++ CK + EA L M G K + ++N LI G G+M A +Y++M
Sbjct: 1009 TLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGD 1068
Query: 355 GCPPDVVTFTSLIEG 369
G + T+ +LI G
Sbjct: 1069 GFLANATTYKALIRG 1083
>AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23985078-23986649 REVERSE
LENGTH=523
Length = 523
Score = 169 bits (429), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/345 (29%), Positives = 175/345 (50%), Gaps = 2/345 (0%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V +LL+ + N+ +A+ L + +N ++ GLC D++ A +
Sbjct: 150 VTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYC 209
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M G D VTYNTL+ GL A LL+++ +K K PNV +T +I + K
Sbjct: 210 MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM-VKRKIDPNVIFFTALIDTFVKEG 268
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ EA +L+ EM R PN FT+NSLI+GF G + A ++ M+ GC PDVVT+
Sbjct: 269 NLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYN 328
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+LI G+C+ +V G+ L+ EM + + T++ LI C++ +L A+ + ++
Sbjct: 329 TLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDC 388
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDA 483
+ P YN ++D C +G +++A +V ++++ + D T+ I+I G C + +A
Sbjct: 389 GVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEA 448
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+F + G PD I + S L + G+ EA ++ + E+
Sbjct: 449 WCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKED 493
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 208/417 (49%), Gaps = 3/417 (0%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
VL V+ ++N + + E L + H +++ +L+ C+ S A L M
Sbjct: 85 VLTVIAKMNKFDIVIYLYH-KMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKL 143
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G P LG L++ F +R + L+ N V+Y+ +++ L K+ L++A
Sbjct: 144 GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 203
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ +F + + + T+N L+ GL ++G +A + L M P+++ + L+
Sbjct: 204 LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDT 263
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
+ + AR+L KE+ ++ PNV +Y ++I+G+C + +A +FD M G P
Sbjct: 264 FVKEGNLLEARNLYKEM-IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFP 322
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T+N+LI GF K ++ + ++ +M + G D T+ +LI GYC+ GK+N ++
Sbjct: 323 DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVF 382
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+ M +S + T+++L+ LC + ++++A ++ L+++++ YN +I G C++
Sbjct: 383 NRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRT 442
Query: 444 GNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
+ EA + + K KPD + +I+G C KG +A + +M G P E
Sbjct: 443 DKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 179/369 (48%), Gaps = 2/369 (0%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
+ D + L E ++ + V + +L+V+ K NK D I L+ ++ + +F
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+L+ C + A L M G P IVT +LL+G C+ A L+ +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMD-G 177
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
F PNV Y TVI+G CK + A +F M++ G + +A T+N+LI G G
Sbjct: 178 FGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 237
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
A + + M+ P+V+ FT+LI+ + + G + +L+ EM R++ ++ T++ LI+
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 297
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKP 462
C L +A+ + + P YN +I G+CKS V++ + EM +
Sbjct: 298 GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 357
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D FT+ LI G+C G+ A +F +M+ G SPD +T IL CL +G +A +
Sbjct: 358 DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 417
Query: 523 ESLHENQGD 531
E L +++ D
Sbjct: 418 EDLQKSEMD 426
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 154/321 (47%), Gaps = 1/321 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN ++ LC+ ++A ++ CM G D+ L+S + R + LL +
Sbjct: 187 YNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
K+ N + + L+ VK L +A L++E++R T+N L+ G C G +
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
+A + M S GC PD+VTYNTL+ G C+ K V+ L E+ + + +Y T+
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQG-LVGDAFTYNTL 365
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I GYC+ K+ A +F+ M G P+ T+N L+D G ++ AL + + +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
D++T+ +I+G CR K+ L+ + + + + +IS LC+ +EA
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 417 LLRQLKRTDIVPQPSIYNHVI 437
L R++K +P IY+ +
Sbjct: 486 LCRRMKEDGFMPSERIYDETL 506
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 133/303 (43%), Gaps = 37/303 (12%)
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
RSF + Y L + D A L E+ L+S+ P++ +T V++ K++K
Sbjct: 36 RSFSGASHHHHYRERLRNELHCIKFDDAFSLFCEM-LQSRPIPSIVDFTRVLTVIAKMNK 94
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
L+ +M+ G + ++F LI F + + AL + KM+ G P +VT S
Sbjct: 95 FDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGS 154
Query: 366 LIEGYCRVGK-----------------------------------VNYGLDLWHEMNTRN 390
L+ G+C+ + +N L++++ M +
Sbjct: 155 LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKG 214
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
I A T++ LIS L S R +A LLR + + I P + +ID + K GN+ EA
Sbjct: 215 IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 274
Query: 451 AIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
+ EM P+ FT+ LI G C+ G DA +F M++ GC PD +T L +
Sbjct: 275 NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 334
Query: 510 LKS 512
KS
Sbjct: 335 CKS 337
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 75/179 (41%), Gaps = 36/179 (20%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TYN L+ CQ G + A+ +++ M G PD
Sbjct: 360 FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPD-------------------------- 393
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
V Y+ LL L + K++ A+ + +L +S ++ T+N+++ GLC
Sbjct: 394 ---------IVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDK 444
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
+ EA+ + G PD + Y T++ GLCR K + R D L + F P+ R Y
Sbjct: 445 LKEAWCLFRSLTRKGVKPDAIAYITMISGLCR-KGLQREADKLCRRMKEDGFMPSERIY 502
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/364 (29%), Positives = 191/364 (52%), Gaps = 9/364 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN ++ C++ A++++ + G P++ L+ + E++
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH-LETSTFNVLMGGLCSAGD 234
+ ++VN VVY +++ L K + A L ++ + ++N ++ G G+
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA---RDLLKEVGLKSKFSPNVR 291
+D A M G SP+++TY +L++GLC+ +D+A RD +K G+K ++
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKL----DIP 655
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y +I G+CK S M+ AS+LF E+ G P+ +NSLI GF +GNM +AL +YKKM
Sbjct: 656 AYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
L G D+ T+T+LI+G + G + +L+ EM + ++V+++ L K +
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+ + ++K+ ++ P IYN VI G+ + GN+DEA + EM +K PD TF IL
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 471 IAGH 474
++G
Sbjct: 836 VSGQ 839
Score = 165 bits (418), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 127/479 (26%), Positives = 216/479 (45%), Gaps = 54/479 (11%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
L+ C+ SA +L+D M +G P+S L+ F ++ + E + +
Sbjct: 345 LITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG 404
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV-----LMGGLCSAGD 234
+ + ++ +K K ++A+ LF E ET NV ++ LC G
Sbjct: 405 LTPSVFHVHTIIQGWLKGQKHEEALKLFDE------SFETGLANVFVCNTILSWLCKQGK 458
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK---EVGLK-------- 283
DEA + L+ M S G P++V+YN ++ G CR K +D AR + E GLK
Sbjct: 459 TDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSI 518
Query: 284 -----------------------SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM-DRS 319
S N Y T+I+G CK+ + +A L M +
Sbjct: 519 LIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEK 578
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
+ ++NS+IDGF K G MDSA+ Y++M +G P+V+T+TSL+ G C+ +++
Sbjct: 579 RLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQA 638
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
L++ EM + + + + LI CK + ++ A L +L + P IYN +I G
Sbjct: 639 LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISG 698
Query: 440 YCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+ GN+ A + +M ++ + D T+T LI G G A ++ +M A G PD
Sbjct: 699 FRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPD 758
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHENQG-------DSLKKSYYEGTNSDVPFSVH 550
EI ++ + L K G + ++ E + +N +++ +Y N D F +H
Sbjct: 759 EIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLH 817
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 117/452 (25%), Positives = 208/452 (46%), Gaps = 37/452 (8%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E L + S + + +++ + H A L+D F+ L + + ++S +
Sbjct: 401 EVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFD-ESFETGLANVFVCNTILSWLCKQGKT 459
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
D + ELL++ + + N V Y+N++ + +D A +F ++ T+++L
Sbjct: 460 DEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL-------- 277
+ G D A + +N M S + V Y T+++GLC++ + +AR+LL
Sbjct: 520 IDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKR 579
Query: 278 ----------------KEVGLKSK-----------FSPNVRSYTTVISGYCKLSKMKEAS 310
KE + S SPNV +YT++++G CK ++M +A
Sbjct: 580 LCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQAL 639
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
+ DEM G K + + +LIDGF K NM+SA ++ ++L G P + SLI G+
Sbjct: 640 EMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGF 699
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
+G + LDL+ +M + L T++ LI L K L A +L +++ +VP
Sbjct: 700 RNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDE 759
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYK 489
IY +++G K G + + EM++ P+ + +IAGH +G +A + +
Sbjct: 760 IIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDE 819
Query: 490 MLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
ML G PD T IL S + + P AA +
Sbjct: 820 MLDKGILPDGATFDILVSGQVGNLQPVRAASL 851
Score = 125 bits (313), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 117/509 (22%), Positives = 222/509 (43%), Gaps = 65/509 (12%)
Query: 82 SLVLEVVKRLNNPILGFKFFQFTRE---KLNVHHSFW-----------TY----NMLLRS 123
S++ ++ R NNP +F+ + R FW TY ++L+R
Sbjct: 74 SVIDVLLNRRNNPEAALRFYNWARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLIRY 133
Query: 124 LCQKGLHSSAKLLY----DCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
+ A +L D + G +SR +L+++++ + D + +++ +
Sbjct: 134 VSTSNPTPMASVLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQM---- 189
Query: 180 VQVNAVVY----DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
++++ + + + LS LV+ N L +A L+ ++ + T +LM
Sbjct: 190 LELDVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKP 249
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA + L+ G PD + Y+ + C+ ++ A LL+E+ K P+ +YT+
Sbjct: 250 AEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTS 309
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
VI K M +A L DEM G N SLI G K ++ SAL ++ KM G
Sbjct: 310 VILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEG 369
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS---LHTF-------------- 398
P+ VTF+ LIE + + G++ L+ + +M ++ S +HT
Sbjct: 370 PSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEAL 429
Query: 399 -----------------SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ ++S+LCK + EA +LL +++ I P YN+V+ G+C
Sbjct: 430 KLFDESFETGLANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHC 489
Query: 442 KSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
+ N+D A + + EK KP+ +T++ILI G +A+ + M ++ + +
Sbjct: 490 RQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGV 549
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQ 529
+ + + L K G +A + ++ E +
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEK 578
>AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION |
chr2:16381647-16384250 FORWARD LENGTH=867
Length = 867
Score = 169 bits (427), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 105/382 (27%), Positives = 197/382 (51%), Gaps = 5/382 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ + + YN ++ + C+ A+ ++ M G P++ L+ F
Sbjct: 476 EQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDE 535
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH-LETSTFNV 224
+ +++ + + + N V+Y+ +++ L K + A + + L++ + + +++N
Sbjct: 536 QNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNS 595
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
++ G GD D A + M G SP++VT+ +L++G C+ +D A ++ E +KS
Sbjct: 596 IIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHE--MKS 653
Query: 285 -KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ ++ +Y +I G+CK + MK A +LF E+ G PN +NSLI GF +G MD+
Sbjct: 654 MELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDA 713
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
A+ +YKKM+ G D+ T+T++I+G + G +N DL+ E+ I VL++
Sbjct: 714 AIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVN 773
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKP 462
L K + +A +L ++K+ D+ P +Y+ VI G+ + GN++EA + EM EK
Sbjct: 774 GLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLHDEMLEKGIVH 833
Query: 463 DKFTFTILIAGHCMKGRAPDAI 484
D F +L++G K A I
Sbjct: 834 DDTVFNLLVSGRVEKPPAASKI 855
Score = 158 bits (399), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 188/394 (47%), Gaps = 38/394 (9%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
++D + L + ++ N V Y+N++ + +D A +F E++ T++
Sbjct: 464 KVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYS 523
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+L+ G D A+ +N M + + V YNT+++GLC++ + +A+++L+ + +
Sbjct: 524 ILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKE 583
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
++S + SY ++I G+ K+ A + EM +G PN TF SLI+GF K MD
Sbjct: 584 KRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNRMDL 643
Query: 344 ALGIYKKM------------------------------LFHGCP-----PDVVTFTSLIE 368
AL + +M LF P P+V + SLI
Sbjct: 644 ALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNSLIS 703
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
G+ +GK++ +DL+ +M IS L T++ +I L K + A DL +L IVP
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLGIVP 763
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIF 487
++ +++G K G +A+ ++ EM++K P+ ++ +IAGH +G +A +
Sbjct: 764 DEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAFRLH 823
Query: 488 YKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ML G D+ +L S ++ P A++I
Sbjct: 824 DEMLEKGIVHDDTVFNLLVSGRVEK--PPAASKI 855
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/424 (23%), Positives = 192/424 (45%), Gaps = 35/424 (8%)
Query: 150 RLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRE 209
R +L++++ R+D + + KV +N+LS LV+ N +D+A ++ +
Sbjct: 170 RAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229
Query: 210 LMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE 269
++ + T +LM +EA K + S G PD + ++ + C+ +
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAACKTPD 289
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
+ A DLL+E+ K + +YT+VI + K M+EA + DEM G +
Sbjct: 290 LVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAAT 349
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
SL++G+ K + AL ++ +M G PD V F+ ++E +C+ ++ ++ + M +
Sbjct: 350 SLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSV 409
Query: 390 NISAS---LHT---------------------FSVLISY----------LCKSNRLQEAR 415
I+ S +HT F I++ CK ++ A
Sbjct: 410 RIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAAT 469
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
L+ +++ I P YN+++ +C+ N+D A +I EM EK +P+ FT++ILI G
Sbjct: 470 SFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGF 529
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLK 534
+A + +M A+ +E+ + + L K G +A + ++L + + S+
Sbjct: 530 FKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMS 589
Query: 535 KSYY 538
+ Y
Sbjct: 590 CTSY 593
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/402 (23%), Positives = 183/402 (45%), Gaps = 9/402 (2%)
Query: 116 TYNMLLR-SLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
T +L+R SL ++ + K+ M G PD L V + L ++ +LL E
Sbjct: 241 TTQLLMRASLRERKPEEAVKIFRRVMS-RGAEPDGLLFSLAVQAACKTPDLVMALDLLRE 299
Query: 175 AQCN-KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ V + Y +++ VK +++A+ + E++ + L+ G C
Sbjct: 300 MRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGN 359
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS-KFSPNVRS 292
++ +A N M G +PD V ++ ++ C+ E+++A + + +KS + +P+
Sbjct: 360 ELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY--MRMKSVRIAPSSVL 417
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
T+I G K + A +F++ S + F N + F K G +D+A K M
Sbjct: 418 VHTMIQGCLKAESPEAALEIFNDSFESWIA-HGFMCNKIFLLFCKQGKVDAATSFLKMME 476
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P+VV + +++ +CR+ ++ ++ EM + + + T+S+LI K+ Q
Sbjct: 477 QKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQ 536
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM--EEKCKPDKFTFTIL 470
A D++ Q+ ++ IYN +I+G CK G +A ++ + E++ ++ +
Sbjct: 537 NAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSI 596
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
I G G A+ + +M G SP+ +T L + KS
Sbjct: 597 IDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKS 638
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 99/229 (43%), Gaps = 2/229 (0%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
F R++ +++ Y + +M A F M P N+++ V+ +D A
Sbjct: 165 FELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAK 224
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
IY KM+ G D VT L+ R K + ++ + +R FS+ +
Sbjct: 225 EIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSRGAEPDGLLFSLAVQAA 284
Query: 406 CKSNRLQEARDLLRQLKRTDIVP-QPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKP-D 463
CK+ L A DLLR+++ VP Y VI + K GN++EA ++ EM P
Sbjct: 285 CKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPMS 344
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
T L+ G+C A+ +F +M G +PD++ ++ K+
Sbjct: 345 VIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKN 393
>AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:23227574-23229031 FORWARD
LENGTH=485
Length = 485
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 205/393 (52%), Gaps = 5/393 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E + H ++YN+++ LC+ A + M G PD + L++ F +R+
Sbjct: 96 EVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRV 155
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ +L+++ + + + V+Y+ ++ K ++DA+ LF + R + T+N L
Sbjct: 156 FDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSL 215
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ GLC +G +A + + M P+++T+ ++ + + A L +E+ +
Sbjct: 216 VAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRC- 274
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
P+V +Y ++I+G C ++ EA + D M G P+ T+N+LI+GF K +D
Sbjct: 275 VDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGT 334
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++++M G D +T+ ++I+GY + G+ + +++ M++R ++ T+S+L+ L
Sbjct: 335 KLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGL 391
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDK 464
C + R+++A L +++++I + YN VI G CK GNV++A + + K KPD
Sbjct: 392 CMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDV 451
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
++T +I+G C K + + +++ KM G P
Sbjct: 452 VSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/310 (31%), Positives = 160/310 (51%), Gaps = 8/310 (2%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V + +LS + K D I LF + + ++N+++ LC A +
Sbjct: 70 VDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGK 129
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYC 301
M FG PD+VT ++L++G C+ V A DL ++E+G F P+V Y T+I G C
Sbjct: 130 MMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG----FRPDVVIYNTIIDGSC 185
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
K+ + +A LFD M+R G + +A T+NSL+ G G A + + M+ P+V+
Sbjct: 186 KIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVI 245
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
TFT++I+ + + GK + + L+ EM R + + T++ LI+ LC R+ EA+ +L +
Sbjct: 246 TFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLM 305
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRA 480
+P YN +I+G+CKS VDE + EM ++ D T+ +I G+ GR
Sbjct: 306 VTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRP 365
Query: 481 PDAIVIFYKM 490
A IF +M
Sbjct: 366 DAAQEIFSRM 375
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/320 (29%), Positives = 164/320 (51%), Gaps = 5/320 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
+ V +L++ + N++ DAI L ++ + +N ++ G C G V++A +
Sbjct: 138 DVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELF 197
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
+ M G D VTYN+L+ GLC A L++++ ++ PNV ++T VI + K
Sbjct: 198 DRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD-IVPNVITFTAVIDVFVK 256
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
K EA L++EM R P+ FT+NSLI+G G +D A + M+ GC PDVVT
Sbjct: 257 EGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVT 316
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+ +LI G+C+ +V+ G L+ EM R + T++ +I ++ R A+++
Sbjct: 317 YNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIF---S 373
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAP 481
R D P Y+ ++ G C + V++A + M++ + + D T+ I+I G C G
Sbjct: 374 RMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVE 433
Query: 482 DAIVIFYKMLATGCSPDEIT 501
DA +F + G PD ++
Sbjct: 434 DAWDLFRSLSCKGLKPDVVS 453
>AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 |
chr4:15403020-15406358 FORWARD LENGTH=1112
Length = 1112
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 176/330 (53%), Gaps = 2/330 (0%)
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
VQ Y+ L+ L++ + ++ A +F ++ + + +T+N L+ +G +DE F
Sbjct: 781 VQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELF 840
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ M + C + +T+N ++ GL + VD A DL ++ FSP +Y +I G
Sbjct: 841 ELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDG 900
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
K ++ EA LF+ M G +PN +N LI+GF K G D+A ++K+M+ G PD
Sbjct: 901 LSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPD 960
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
+ T++ L++ C VG+V+ GL + E+ ++ + ++++I+ L KS+RL+EA L
Sbjct: 961 LKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFN 1020
Query: 420 QLKRT-DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMK 477
++K + I P YN +I +G V+EA I E++ +P+ FTF LI G+ +
Sbjct: 1021 EMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLS 1080
Query: 478 GRAPDAIVIFYKMLATGCSPDEITVRILSS 507
G+ A ++ M+ G SP+ T L +
Sbjct: 1081 GKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 113/432 (26%), Positives = 196/432 (45%), Gaps = 2/432 (0%)
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
F +F+ LN+ H+ T N +L +L G ++D M+ D+ +
Sbjct: 102 FSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFK 161
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
S ++ L + L + + +NA Y+ L+ +L+K +A+ ++R ++
Sbjct: 162 SLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRP 221
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
T++ LM GL D+D L M + G P++ T+ + L R +++ A ++L
Sbjct: 222 SLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEIL 281
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
K + P+V +YT +I C K+ A +F++M KP+ T+ +L+D F
Sbjct: 282 KRMD-DEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
++DS + +M G PDVVTFT L++ C+ G D M + I +LHT
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
++ LI L + +RL +A +L ++ + P Y ID Y KSG+ A +M+
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 458 EK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPG 516
K P+ + GR +A IFY + G PD +T ++ C K G
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEID 520
Query: 517 EAARIKESLHEN 528
EA ++ + EN
Sbjct: 521 EAIKLLSEMMEN 532
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 197/435 (45%), Gaps = 19/435 (4%)
Query: 103 FTREKLNVHHSFWTYNMLLRSLCQKGLHSSA-----KLLYDCMRFDGKLPDSRLLGFLVS 157
F + K V+ F T LL + + L A LY+C L L+G +++
Sbjct: 666 FHQMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILA 725
Query: 158 SFALVDRLDVSKELLAEAQC---NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
+ + + S+ L+A C + + V + Y KHN + A LF + +
Sbjct: 726 EAGIDNAVSFSERLVANGICRDGDSILVPIIRYS------CKHNNVSGARTLFEKFTKDL 779
Query: 215 S-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
+ T+N+L+GGL A ++ A ++S GC PD+ TYN LL + ++D
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 274 RDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF-DEMDRSGTKPNAFTFNSLI 332
+L KE+ + N ++ VISG K + +A L+ D M P A T+ LI
Sbjct: 840 FELYKEMS-THECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
DG K G + A +++ ML +GC P+ + LI G+ + G+ + L+ M +
Sbjct: 899 DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
L T+SVL+ LC R+ E ++LK + + P YN +I+G KS ++EA +
Sbjct: 959 PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVL 1018
Query: 453 VVEME--EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
EM+ PD +T+ LI + G +A I+ ++ G P+ T L
Sbjct: 1019 FNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYS 1078
Query: 511 KSGMPGEAARIKESL 525
SG P A + +++
Sbjct: 1079 LSGKPEHAYAVYQTM 1093
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 218/468 (46%), Gaps = 47/468 (10%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
+K F +E + + + TYN LL L + G A L++ M G P++ L
Sbjct: 557 AWKMFMRMKE-MKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
D + ++ ++L + + Y+ ++ LVK+ ++ +A+C F + M+ +
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ-MKKLVY 674
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFL-NGMRSFGCSPDIVTYNTLL-------------- 261
+ T L+ G+ A +++A+K + N + + P + + L+
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVS 734
Query: 262 -------HGLCRIKE---------------VDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+G+CR + V AR L ++ P + +Y +I G
Sbjct: 735 FSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGG 794
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+ ++ A +F ++ +G P+ T+N L+D + K G +D +YK+M H C +
Sbjct: 795 LLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEAN 854
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHE-MNTRNISASLHTFSVLISYLCKSNRLQEARDLL 418
+T +I G + G V+ LDL+++ M+ R+ S + T+ LI L KS RL EA+ L
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 419 RQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMK 477
+ P +IYN +I+G+ K+G D A A+ M +E +PD T+++L+ CM
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 478 GRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
GR + + F ++ +G +PD + ++ + L G++ R++E+L
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGL------GKSHRLEEAL 1016
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 167/339 (49%), Gaps = 4/339 (1%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
F +FT++ L V TYN+L+ L + + A+ ++ ++ G +PD FL+ ++
Sbjct: 772 FEKFTKD-LGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAY 830
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
++D EL E ++ + N + ++ ++S LVK +DDA+ L+ +LM T
Sbjct: 831 GKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPT 890
Query: 220 S-TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
+ T+ L+ GL +G + EA + GM +GC P+ YN L++G + E D A L K
Sbjct: 891 ACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFK 950
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
+ +K P++++Y+ ++ C + ++ E F E+ SG P+ +N +I+G K
Sbjct: 951 RM-VKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKS 1009
Query: 339 GNMDSALGIYKKM-LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
++ AL ++ +M G PD+ T+ SLI G V +++E+ + ++ T
Sbjct: 1010 HRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFT 1069
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
F+ LI S + + A + + + P Y +
Sbjct: 1070 FNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 167/379 (44%), Gaps = 7/379 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY LL S K + M DG +PD LV + + + L
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + N Y+ L+ L++ ++LDDA+ LF + T+ V + +GD
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRS 292
A + M++ G +P+IV N L+ L + A+ + LK++GL P+ +
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGL----VPDSVT 505
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y ++ Y K+ ++ EA L EM +G +P+ NSLI+ K +D A ++ +M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
P VVT+ +L+ G + GK+ ++L+ M + + TF+ L LCK++ +
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVT 625
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIA 472
A +L ++ VP YN +I G K+G V EA +M++ PD T L+
Sbjct: 626 LALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTLCTLLP 685
Query: 473 GHCMKGRAPDAIVIFYKML 491
G DA I L
Sbjct: 686 GVVKASLIEDAYKIITNFL 704
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 119/498 (23%), Positives = 207/498 (41%), Gaps = 83/498 (16%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E L V + +TY + + + G SA ++ M+ G P+ + S A R
Sbjct: 425 ESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRD 484
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+K++ + + ++V Y+ ++ K ++D+AI L E+M + + N L
Sbjct: 485 REAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSL 544
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ L A VDEA+K M+ P +VTYNTLL GL + ++ A +L + + ++
Sbjct: 545 INTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGM-VQKG 603
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PN ++ T+ CK ++ A + +M G P+ FT+N++I G VK G + A+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663
Query: 346 GIY---KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL----------------WHEM 386
+ KK+++ PD VT +L+ G + + + W ++
Sbjct: 664 CFFHQMKKLVY----PDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDL 719
Query: 387 -----------NTRNISASLHTFSV----------LISYLCKSNRLQEAR---------- 415
N + S L + +I Y CK N + AR
Sbjct: 720 IGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDL 779
Query: 416 --------------------------DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
D+ Q+K T +P + YN ++D Y KSG +DE
Sbjct: 780 GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839
Query: 450 NAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT-GCSPDEITVRILSS 507
+ EM +C+ + T I+I+G G DA+ ++Y +++ SP T L
Sbjct: 840 FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLID 899
Query: 508 CLLKSGMPGEAARIKESL 525
L KSG EA ++ E +
Sbjct: 900 GLSKSGRLYEAKQLFEGM 917
>AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10786948-10789053 REVERSE
LENGTH=701
Length = 701
Score = 166 bits (420), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK-F 241
N + + +L+ L K + A + E++R+ T L+ GLC G ++AF+ F
Sbjct: 286 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 345
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
L +RS P++ TY +++ G C+ +++RA L + + F PNV +YTT+I+G+C
Sbjct: 346 LKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLF-PNVNTYTTLINGHC 404
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
K A L + M G PN +T+N+ ID K A + K G D V
Sbjct: 405 KAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGV 464
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
T+T LI+ C+ +N L + MN A + ++LI+ C+ +++E+ L + +
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRA 480
++P Y +I YCK G++D A M+ C PD FT+ LI+G C K
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 481 PDAIVIFYKMLATGCSPDEIT 501
+A ++ M+ G SP E+T
Sbjct: 585 DEACKLYEAMIDRGLSPPEVT 605
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 185/369 (50%), Gaps = 3/369 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
++ +F+ + RL+ + ++ + Q + +++ + +L + V+ ++ A +F E+
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
++S++ +++ G G + EA ++L GM G PD T +L LC V+RA
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+++ + F PN+ ++T++I G CK +K+A + +EM R+G KPN +T +LIDG
Sbjct: 273 WYFRKM-IDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDG 331
Query: 335 FVKVGNMDSALGIYKKMLFHGC-PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
K G + A ++ K++ P+V T+TS+I GYC+ K+N L+ M + +
Sbjct: 332 LCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFP 391
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
+++T++ LI+ CK+ A +L+ + +P YN ID CK EA ++
Sbjct: 392 NVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELL 451
Query: 454 VE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
+ + D T+TILI C + A+ F +M TG D IL + +
Sbjct: 452 NKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQ 511
Query: 513 GMPGEAARI 521
E+ R+
Sbjct: 512 KKMKESERL 520
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 136/293 (46%), Gaps = 16/293 (5%)
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGL-----CRIKEVDRARDLLKEVGL-----KSKFSPN 289
KF + MR + + D + N L C ++ L + VG+ +P+
Sbjct: 122 KFRHFMRLYLVTADSLLANGNLQKAHEVMRCMLRNFSEIGRLNEAVGMVMDMQNQGLTPS 181
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
+ V+ +L ++ A ++FDEM G P++ ++ ++ G + G + A
Sbjct: 182 SITMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLT 241
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
M+ G PD T T ++ C G VN + + +M +L F+ LI LCK
Sbjct: 242 GMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKG 301
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNH--VIDGYCKSGNVDEANAIVVEM--EEKCKPDKF 465
+++A ++L ++ R +P++Y H +IDG CK G ++A + +++ + KP+
Sbjct: 302 SIKQAFEMLEEMVRNGW--KPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVH 359
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
T+T +I G+C + + A ++F +M G P+ T L + K+G G A
Sbjct: 360 TYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRA 412
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L++ C++ + A + M G D RL L+++F ++ S+ L
Sbjct: 465 TYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLV 524
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ Y +++S K +D A+ F + R ++ T+ L+ GLC V
Sbjct: 525 VSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMV 584
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA K M G SP VT TL + C+ + A LL+ + K +R+ T
Sbjct: 585 DEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW----IRTVRT 640
Query: 296 VISGYCKLSKMKEASSLFDEM 316
++ C K+ A+ F ++
Sbjct: 641 LVRKLCSEKKVGVAALFFQKL 661
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 78/199 (39%), Gaps = 36/199 (18%)
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
++ F ++G ++ A+G+ M G P +T ++E +G + Y +++ EM+ R
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
+ VP S Y ++ G + G + EA+
Sbjct: 213 V-----------------------------------VPDSSSYKLMVIGCFRDGKIQEAD 237
Query: 451 AIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
+ M ++ PD T T+++ C G AI F KM+ G P+ I L L
Sbjct: 238 RWLTGMIQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297
Query: 510 LKSGMPGEAARIKESLHEN 528
K G +A + E + N
Sbjct: 298 CKKGSIKQAFEMLEEMVRN 316
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 205/428 (47%), Gaps = 40/428 (9%)
Query: 125 CQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL-DVSKELLAEAQCNKVQVN 183
C++ L+ +A+ L F G +PDSRL L+ F + + D + ++ V +
Sbjct: 71 CER-LYGAARTLSAMCTF-GVVPDSRLWNSLIHQFNVNGLVHDQVSLIYSKMIACGVSPD 128
Query: 184 AVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLN 243
+ L+ K +L AI L R + S ++T T+N ++ GLC G DEA++FL+
Sbjct: 129 VFALNVLIHSFCKVGRLSFAISLLRNRVIS---IDTVTYNTVISGLCEHGLADEAYQFLS 185
Query: 244 GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG---------------------- 281
M G PD V+YNTL+ G C++ RA+ L+ E+
Sbjct: 186 EMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEE 245
Query: 282 -----LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
+ S F P+V +++++I+ CK K+ E L EM+ PN T+ +L+D
Sbjct: 246 AYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLF 305
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
K AL +Y +M+ G P D+V +T L++G + G + + + N ++
Sbjct: 306 KANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVV 365
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
T++ L+ LCK+ L A ++ Q+ ++P Y+ +I+GY K G ++EA +++ +M
Sbjct: 366 TYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKM 425
Query: 457 EEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
E++ P+ FT+ +I G G+ AI + +M G + + L + L + G
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIG-- 483
Query: 516 GEAARIKE 523
RIKE
Sbjct: 484 ----RIKE 487
Score = 139 bits (350), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 115/456 (25%), Positives = 205/456 (44%), Gaps = 37/456 (8%)
Query: 101 FQFTRE--KLNVHHSFWTYNMLLRSLCQKGLHSSAKLL-------------------YDC 139
+QF E K+ + +YN L+ C+ G AK L Y+
Sbjct: 181 YQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNL 240
Query: 140 MRFDGKLPDSRLLGF---LVSSFALVDRLDVSKE------LLAEAQCNKVQVNAVVYDNL 190
+ D + GF +V+ ++++RL + LL E + V N V Y L
Sbjct: 241 HAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTL 300
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
+ L K N A+ L+ +++ ++ + VLM GL AGD+ EA K +
Sbjct: 301 VDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQ 360
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
P++VTY L+ GLC+ ++ A ++ ++ L+ PNV +Y+++I+GY K ++EA
Sbjct: 361 VPNVVTYTALVDGLCKAGDLSSAEFIITQM-LEKSVIPNVVTYSSMINGYVKKGMLEEAV 419
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
SL +M+ PN FT+ ++IDG K G + A+ + K+M G + +L+
Sbjct: 420 SLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHL 479
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
R+G++ L +M ++ ++ ++ LI K + A +++ +
Sbjct: 480 KRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDV 539
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
YN +I G K G V A E+ +PD TF I++ +G + + ++ KM
Sbjct: 540 VSYNVLISGMLKFGKVGADWAYKGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKM 599
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ G P L SC + GM E +++E++H
Sbjct: 600 KSCGIKPS------LMSCNIVVGMLCENGKMEEAIH 629
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 14/333 (4%)
Query: 101 FQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA 160
++ REK + T+N+++ S ++G L+D M+ G P +V
Sbjct: 561 YKGMREK-GIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLC 619
Query: 161 LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS 220
+++ + +L + ++ N Y L KH + D L+ L
Sbjct: 620 ENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQ 679
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
+N L+ LC G +A + M + G PD VT+N+L+HG V +A V
Sbjct: 680 VYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTY-SV 738
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+++ SPNV +Y T+I G +KE EM G +P+ FT+N+LI G K+GN
Sbjct: 739 MMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRPDDFTYNALISGQAKIGN 798
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
M ++ IY +M+ G P T+ LI + VGK+ +L EM R +S + T+
Sbjct: 799 MKGSMTIYCEMIADGLVPKTSTYNVLISEFANVGKMLQARELLKEMGKRGVSPNTSTYCT 858
Query: 401 LISYLC------------KSNRLQEARDLLRQL 421
+IS LC K+ L EA+ LL+++
Sbjct: 859 MISGLCKLCTHPDVEWNKKAMYLAEAKGLLKEM 891
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 188/434 (43%), Gaps = 45/434 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN ++ LC+ GL A M G LPD+ L+ F V +K L+ E
Sbjct: 163 TYNTVISGLCEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEI 222
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
++N + + LLS + +++A +R+++ S + TF+ ++ LC G V
Sbjct: 223 S----ELNLITHTILLSSYYNLHAIEEA---YRDMVMSGFDPDVVTFSSIINRLCKGGKV 275
Query: 236 DEAFKFLNGMRSFGCSP-----------------------------------DIVTYNTL 260
E L M P D+V Y L
Sbjct: 276 LEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVL 335
Query: 261 LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
+ GL + ++ A K + L+ PNV +YT ++ G CK + A + +M
Sbjct: 336 MDGLFKAGDLREAEKTFKML-LEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKS 394
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
PN T++S+I+G+VK G ++ A+ + +KM P+ T+ ++I+G + GK +
Sbjct: 395 VIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEEMAI 454
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+L EM + + + L+++L + R++E + L++ + + Y +ID +
Sbjct: 455 ELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQINYTSLIDVF 514
Query: 441 CKSGNVDEANAIVVEMEEKCKP-DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
K G+ + A A EM+E+ P D ++ +LI+G G+ A + M G PD
Sbjct: 515 FKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKV-GADWAYKGMREKGIEPDI 573
Query: 500 ITVRILSSCLLKSG 513
T I+ + K G
Sbjct: 574 ATFNIMMNSQRKQG 587
Score = 122 bits (305), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 182/408 (44%), Gaps = 13/408 (3%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E NV + +TY ++ L + G A L MR G ++ +L LV+ + R+
Sbjct: 426 EDQNVVPNGFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEENNYILDALVNHLKRIGRI 485
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
K L+ + V ++ + Y +L+ V K + A+ E+ + ++NVL
Sbjct: 486 KEVKGLVKDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVL 545
Query: 226 MGGLCSAGDV--DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD---RARDLLKEV 280
+ G+ G V D A+K GMR G PDI T+N +++ + + + + D +K
Sbjct: 546 ISGMLKFGKVGADWAYK---GMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSC 602
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
G+K P++ S V+ C+ KM+EA + ++M PN T+ +D K
Sbjct: 603 GIK----PSLMSCNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTSSKHKR 658
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
D+ ++ +L +G + +LI C++G + +M R TF+
Sbjct: 659 ADAIFKTHETLLSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNS 718
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK- 459
L+ + +++A + I P + YN +I G +G + E + + EM+ +
Sbjct: 719 LMHGYFVGSHVRKALSTYSVMMEAGISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRG 778
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
+PD FT+ LI+G G ++ I+ +M+A G P T +L S
Sbjct: 779 MRPDDFTYNALISGQAKIGNMKGSMTIYCEMIADGLVPKTSTYNVLIS 826
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 98/440 (22%), Positives = 188/440 (42%), Gaps = 38/440 (8%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y +L+ L + G A+ + + D ++P+ LV L ++ ++ +
Sbjct: 332 YTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQML 391
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
V N V Y ++++ VK L++A+ L R++ + T+ ++ GL AG +
Sbjct: 392 EKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPNGFTYGTVIDGLFKAGKEE 451
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
A + MR G + + L++ L RI + + L+K++ K + +YT++
Sbjct: 452 MAIELSKEMRLIGVEENNYILDALVNHLKRIGRIKEVKGLVKDMVSKGVTLDQI-NYTSL 510
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I + K + A + +EM G + ++N LI G +K G + + YK M G
Sbjct: 511 IDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKFGKVGADWA-YKGMREKGI 569
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
PD+ TF ++ + G L LW +M + I SL + ++++ LC++ +++EA
Sbjct: 570 EPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMSCNIVVGMLCENGKMEEAIH 629
Query: 417 LLRQLKRTDIVPQPS-----------------------------------IYNHVIDGYC 441
+L Q+ +I P + +YN +I C
Sbjct: 630 ILNQMMLMEIHPNLTTYRIFLDTSSKHKRADAIFKTHETLLSYGIKLSRQVYNTLIATLC 689
Query: 442 KSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
K G +A ++ +ME + PD TF L+ G+ + A+ + M+ G SP+
Sbjct: 690 KLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHGYFVGSHVRKALSTYSVMMEAGISPNVA 749
Query: 501 TVRILSSCLLKSGMPGEAAR 520
T + L +G+ E +
Sbjct: 750 TYNTIIRGLSDAGLIKEVDK 769
>AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2014440-2015942 REVERSE
LENGTH=500
Length = 500
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 108/348 (31%), Positives = 170/348 (48%), Gaps = 6/348 (1%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFREL-MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLN 243
V + LL + K NK + I LFR L M SH + +F L+ C + A L
Sbjct: 80 VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISH-DLYSFTTLIDCFCRCARLSLALSCLG 138
Query: 244 GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE-VGLKSKFSPNVRSYTTVISGYCK 302
M G P IVT+ +L++G C + A L+ + VGL + PNV Y T+I C+
Sbjct: 139 KMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG--YEPNVVIYNTIIDSLCE 196
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
++ A + M + G +P+ T+NSLI G + I M+ G PDV+T
Sbjct: 197 KGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVIT 256
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
F++LI+ Y + G++ ++EM R+++ ++ T++ LI+ LC L EA+ +L L
Sbjct: 257 FSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVLNVLV 316
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAP 481
P YN +I+GYCK+ VD+ I+ M + D FT+ L G+C G+
Sbjct: 317 SKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFS 376
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
A + +M++ G PD T IL L G G+A E L +++
Sbjct: 377 AAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSK 424
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 178/377 (47%), Gaps = 2/377 (0%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+ F RL ++ L + + + V + +L++ N+ +A+ L +++
Sbjct: 120 LIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLG 179
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+N ++ LC G V+ A L M+ G PD+VTYN+L+ L +
Sbjct: 180 YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSA 239
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+L ++ ++ SP+V +++ +I Y K ++ EA ++EM + PN T+NSLI+G
Sbjct: 240 RILSDM-MRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLING 298
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
G +D A + ++ G P+ VT+ +LI GYC+ +V+ G+ + M+ +
Sbjct: 299 LCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGD 358
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
T++ L C++ + A +L ++ + P +N ++DG C G + +A +
Sbjct: 359 TFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLE 418
Query: 455 EMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
++++ K T+ I+I G C + DA +F + G SPD IT + L +
Sbjct: 419 DLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKR 478
Query: 514 MPGEAARIKESLHENQG 530
+ EA + + + G
Sbjct: 479 LWREAHELYRKMQKEDG 495
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/419 (24%), Positives = 197/419 (47%), Gaps = 8/419 (1%)
Query: 78 HLTPSLV-----LEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSS 132
H PS+V L + +LN F+ E L + H +++ L+ C+ S
Sbjct: 74 HPLPSIVDFSRLLIAIAKLNKYEAVISLFRHL-EMLGISHDLYSFTTLIDCFCRCARLSL 132
Query: 133 AKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLS 192
A M G P G LV+ F V+R + L+ + + N V+Y+ ++
Sbjct: 133 ALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIID 192
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSP 252
L + +++ A+ + + + + + T+N L+ L +G + + L+ M G SP
Sbjct: 193 SLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISP 252
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
D++T++ L+ + ++ A+ E+ ++ +PN+ +Y ++I+G C + EA +
Sbjct: 253 DVITFSALIDVYGKEGQLLEAKKQYNEM-IQRSVNPNIVTYNSLINGLCIHGLLDEAKKV 311
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
+ + G PNA T+N+LI+G+ K +D + I M G D T+ +L +GYC+
Sbjct: 312 LNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQ 371
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
GK + + M + + ++TF++L+ LC ++ +A L L+++ V
Sbjct: 372 AGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIIT 431
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
YN +I G CK+ V++A + + K PD T+ ++ G K +A ++ KM
Sbjct: 432 YNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKM 490
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 88/353 (24%), Positives = 169/353 (47%), Gaps = 1/353 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL S T+ L+ C A L D + G P+ + ++ S +++
Sbjct: 142 KLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVN 201
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ ++L + ++ + V Y++L++ L + + ++MR + TF+ L+
Sbjct: 202 TALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMMRMGISPDVITFSALI 261
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
G + EA K N M +P+IVTYN+L++GLC +D A+ +L V + F
Sbjct: 262 DVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLDEAKKVL-NVLVSKGF 320
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
PN +Y T+I+GYCK ++ + + M R G + FT+N+L G+ + G +A
Sbjct: 321 FPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEK 380
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+ +M+ G PD+ TF L++G C GK+ L ++ + T++++I LC
Sbjct: 381 VLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLC 440
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
K++++++A L L + P Y ++ G + EA+ + +M+++
Sbjct: 441 KADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKE 493
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 151/309 (48%), Gaps = 1/309 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN ++ SLC+KG ++A + M+ G PD L++ VS +L++
Sbjct: 187 YNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVSARILSDMM 246
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + + + L+ V K +L +A + E+++ + T+N L+ GLC G +D
Sbjct: 247 RMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLINGLCIHGLLD 306
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA K LN + S G P+ VTYNTL++G C+ K VD +L V + + +Y T+
Sbjct: 307 EAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILC-VMSRDGVDGDTFTYNTL 365
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
GYC+ K A + M G P+ +TFN L+DG G + AL + +
Sbjct: 366 YQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKT 425
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
++T+ +I+G C+ KV L+ + + +S + T+ ++ L + +EA +
Sbjct: 426 VVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHE 485
Query: 417 LLRQLKRTD 425
L R++++ D
Sbjct: 486 LYRKMQKED 494
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 6/230 (2%)
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
K +A +LF +M S P+ F+ L+ K+ ++ + +++ + G D+ +FT
Sbjct: 59 KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+LI+ +CR +++ L +M S+ TF L++ C NR EA L+ Q+
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDA 483
P IYN +ID C+ G V+ A ++ M++ +PD T+ LI G +
Sbjct: 179 GYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGVS 238
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR-----IKESLHEN 528
I M+ G SPD IT L K G EA + I+ S++ N
Sbjct: 239 ARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPN 288
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 78/173 (45%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ C+ + M DG D+ L + + ++++L
Sbjct: 326 TYNTLINGYCKAKRVDDGMKILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V + ++ LL L H K+ A+ +L +S + + T+N+++ GLC A V
Sbjct: 386 VSCGVHPDMYTFNILLDGLCDHGKIGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKV 445
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
++A+ + G SPD++TY T++ GL R + A +L +++ + P
Sbjct: 446 EDAWYLFCSLALKGVSPDVITYITMMIGLRRKRLWREAHELYRKMQKEDGLMP 498
>AT5G46100.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18694316-18695734 REVERSE
LENGTH=472
Length = 472
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 171/349 (48%), Gaps = 25/349 (7%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC-SAGDVDEAFKFLNGM 245
Y +L++LV+ N+L+ A ++ + ++ NVL+ LC + G VD K M
Sbjct: 124 YVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEM 183
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
GC PD TY TL+ GLCR +D A+ L E+ ++ +P V +YT++I+G C
Sbjct: 184 PKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEM-VEKDCAPTVVTYTSLINGLCGSKN 242
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ EA +EM G +PN FT++SL+DG K G A+ +++ M+ GC P++VT+T+
Sbjct: 243 VDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTT 302
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
LI G C+ K+ ++L MN + + + +IS C ++ +EA + L ++
Sbjct: 303 LITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGG 362
Query: 426 IVPQPSIYN-------HVIDGYCKSGNVD--------EANAIVVEMEEKCKPDKFTFTIL 470
I P +N V+ G C + + I VE+E T L
Sbjct: 363 ITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYLSMRSRGISVEVE--------TLESL 414
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
+ C KG A+ + +++ GC P + T ++L L + GEA+
Sbjct: 415 VKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKTIVGEAS 463
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 185/395 (46%), Gaps = 17/395 (4%)
Query: 143 DGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLD- 201
+G + D G++V ++ +++L+ K++ V D LLS+ + ++
Sbjct: 45 NGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM---KIENCVVSEDILLSICRGYGRVHR 101
Query: 202 --DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
D++ +F ++ + ++ L ++ AFKF MR G P + + N
Sbjct: 102 PFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNV 161
Query: 260 LLHGLCRIK-EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
L+ LCR VD + E+ K P+ +Y T+ISG C+ ++ EA LF EM
Sbjct: 162 LIKALCRNDGTVDAGLKIFLEMP-KRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVE 220
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
P T+ SLI+G N+D A+ ++M G P+V T++SL++G C+ G+
Sbjct: 221 KDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQ 280
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
++L+ M R ++ T++ LI+ LCK ++QEA +LL ++ + P +Y VI
Sbjct: 281 AMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMNLQGLKPDAGLYGKVIS 340
Query: 439 GYCKSGNVDEANAIVVEM-EEKCKPDKFTFTI-------LIAGHCMKGRAPDAIVIFYKM 490
G+C EA + EM P++ T+ I ++ G C A ++ M
Sbjct: 341 GFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLC-ANYPSRAFTLYLSM 399
Query: 491 LATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+ G S + T+ L CL K G +A ++ + +
Sbjct: 400 RSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 120/234 (51%), Gaps = 2/234 (0%)
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++ GY ++ + ++ +F +M P+ + +++ V+ ++ A YK M
Sbjct: 91 SICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREI 150
Query: 355 GCPPDVVTFTSLIEGYCRV-GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
G PP V + LI+ CR G V+ GL ++ EM R +T+ LIS LC+ R+ E
Sbjct: 151 GLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDE 210
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIA 472
A+ L ++ D P Y +I+G C S NVDEA + EM+ K +P+ FT++ L+
Sbjct: 211 AKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMD 270
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
G C GR+ A+ +F M+A GC P+ +T L + L K EA + + ++
Sbjct: 271 GLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAVELLDRMN 324
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 113/313 (36%), Gaps = 78/313 (24%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY L+ LC +K + + MR+ L E
Sbjct: 229 TYTSLINGLC------GSKNVDEAMRY-----------------------------LEEM 253
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ N Y +L+ L K + A+ LF +M T+ L+ GLC +
Sbjct: 254 KSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKI 313
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA + L+ M G PD Y ++ G C I SKF
Sbjct: 314 QEAVELLDRMNLQGLKPDAGLYGKVISGFCAI----------------SKF--------- 348
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV-----GNMDS-ALGIYK 349
+EA++ DEM G PN T+N + +V N S A +Y
Sbjct: 349 -----------REAANFLDEMILGGITPNRLTWNIHVKTSNEVVRGLCANYPSRAFTLYL 397
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
M G +V T SL++ C+ G+ + L E+ T S T+ +LI +
Sbjct: 398 SMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTDGCIPSKGTWKLLIGHTLDKT 457
Query: 410 RLQEARD-LLRQL 421
+ EA D LLR L
Sbjct: 458 IVGEASDTLLRDL 470
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
+ + +TY+ L+ LC+ G A L++ M G P+ L++ ++ +
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM-------RSHSHLETSTF 222
ELL ++ +A +Y ++S +K +A E++ R ++ T
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
N ++ GLC A AF MRS G S ++ T +L+ LC+ E +A L+ E+
Sbjct: 378 NEVVRGLC-ANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEI 434
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 115/404 (28%), Positives = 185/404 (45%), Gaps = 8/404 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ L+ C++G A L+ M G PD L+ + L + +L ++A
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V+++ VV+ + + V VK L A +++ ++ T+ +L+ GLC G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EAF + G P IVTY++L+ G C+ + R+ L E +K + P+V Y
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL-RSGFALYEDMIKMGYPPDVVIYGV 466
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ G K M A +M + N FNSLIDG+ ++ D AL +++ M +G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 356 CPPDVVTFTSLI------EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
PDV TFT+++ + +C+ K GL L+ M ISA + +V+I L K +
Sbjct: 527 IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCH 586
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFT 468
R+++A L + P YN +I GYC +DEA I ++ P+ T T
Sbjct: 587 RIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLT 646
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
ILI C AI +F M G P+ +T L KS
Sbjct: 647 ILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Score = 142 bits (358), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 179/400 (44%), Gaps = 10/400 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L++ LCQ G A +Y + G P L+ F L L +
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V+Y L+ L K + A+ +++ L FN L+ G C
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL-------KSKFSP 288
DEA K M +G PD+ T+ T++ I E + + +GL ++K S
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMR--VSIMEDAFCKHMKPTIGLQLFDLMQRNKISA 570
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
++ VI K ++++AS F+ + +P+ T+N++I G+ + +D A I+
Sbjct: 571 DIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF 630
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
+ + P+ VT T LI C+ ++ + ++ M + + T+ L+ + KS
Sbjct: 631 ELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS 690
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTF 467
++ + L +++ I P Y+ +IDG CK G VDEA I + ++ K PD +
Sbjct: 691 VDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAY 750
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
ILI G+C GR +A +++ ML G PD++ R LS
Sbjct: 751 AILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 790
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 173/368 (47%), Gaps = 16/368 (4%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA----LV 162
K + S TY+ L+ C+ G S LY+ M G PD + G LV + ++
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+ S ++L ++ +++N VV+++L+ + N+ D+A+ +FR + + +TF
Sbjct: 479 HAMRFSVKMLGQS----IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 223 NVLM------GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
+M C + + M+ S DI N ++H L + ++ A
Sbjct: 535 TTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKF 594
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
+ ++ K P++ +Y T+I GYC L ++ EA +F+ + + PN T LI
Sbjct: 595 FNNL-IEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLC 653
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
K +MD A+ ++ M G P+ VT+ L++ + + + L+ EM + IS S+
Sbjct: 654 KNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIV 713
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
++S++I LCK R+ EA ++ Q ++P Y +I GYCK G + EA + M
Sbjct: 714 SYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHM 773
Query: 457 -EEKCKPD 463
KPD
Sbjct: 774 LRNGVKPD 781
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 186/408 (45%), Gaps = 43/408 (10%)
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
VD+++V+ LL+ N V + L++ K ++D A LF+ + + +
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
++ L+ G AG + K + G D+V +++ + + ++ A + K +
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM- 382
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
L SPNV +YT +I G C+ ++ EA ++ ++ + G +P+ T++SLIDGF K GN+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
S +Y+ M+ G PPDVV + L++G + G + + + +M ++I ++ F+ L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI------DGYCK------------- 442
I C+ NR EA + R + I P + + V+ D +CK
Sbjct: 503 IDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 443 ------SGNVDEANAIV--------VE---------MEEKCKPDKFTFTILIAGHCMKGR 479
S ++ N ++ +E +E K +PD T+ +I G+C R
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+A IF + T P+ +T+ IL L K+ A R+ + E
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAE 670
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 167/394 (42%), Gaps = 43/394 (10%)
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
C + N V Y L+ L + ++ +A ++ ++++ T++ L+ G C G++
Sbjct: 384 CQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLR 443
Query: 237 EAFKFLNGMRSFGCSPDIVTY-----------------------------------NTLL 261
F M G PD+V Y N+L+
Sbjct: 444 SGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLI 503
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI------SGYCKLSKMKEASSLFDE 315
G CR+ D A + + +G+ P+V ++TTV+ +CK K LFD
Sbjct: 504 DGWCRLNRFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDL 562
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
M R+ + N +I K ++ A + ++ PD+VT+ ++I GYC + +
Sbjct: 563 MQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRR 622
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
++ ++ + + T ++LI LCK+N + A + + P Y
Sbjct: 623 LDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGC 682
Query: 436 VIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
++D + KS +++ + + EM+EK P +++I+I G C +GR +A IF++ +
Sbjct: 683 LMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAK 742
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
PD + IL K G EAA + E + N
Sbjct: 743 LLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 776
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 4/305 (1%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLE-TSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
+L+ L+ +++D F +L R S ++ L G+V +A F +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G IV+ N +L GL + +++ A LL V L +PNV ++ T+I+G+CK +M
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLV-LDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A LF M++ G +P+ +++LIDG+ K G + ++ + L G DVV F+S I+
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
Y + G + ++ M + IS ++ T+++LI LC+ R+ EA + Q+ + + P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
Y+ +IDG+CK GN+ A+ +M + PD + +L+ G +G A+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 488 YKMLA 492
KML
Sbjct: 485 VKMLG 489
>AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15637177-15639450 REVERSE
LENGTH=757
Length = 757
Score = 162 bits (411), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 214/455 (47%), Gaps = 15/455 (3%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
VL K+L + +FF++T + H T+ +++ L + + A+ + M
Sbjct: 123 VLHGAKKLEH---ALQFFRWTERSGLIRHDRDTHMKMIKMLGEVSKLNHARCILLDMPEK 179
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G D + L+ S+ + S ++ + + V+ Y++L V+++ + A
Sbjct: 180 GVPWDEDMFVVLIESYGKAGIVQESVKIFQKMKDLGVERTIKSYNSLFKVILRRGRYMMA 239
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
F +++ T+N+++ G + ++ A +F M++ G SPD T+NT+++G
Sbjct: 240 KRYFNKMVSEGVEPTRHTYNLMLWGFFLSLRLETALRFFEDMKTRGISPDDATFNTMING 299
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
CR K++D A L E+ +K P+V SYTT+I GY + ++ + +F+EM SG +P
Sbjct: 300 FCRFKKMDEAEKLFVEMK-GNKIGPSVVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEP 358
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLF-HGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
NA T+++L+ G G M A I K M+ H P D F L+ + G + ++
Sbjct: 359 NATTYSTLLPGLCDAGKMVEAKNILKNMMAKHIAPKDNSIFLKLLVSQSKAGDMAAATEV 418
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV--------PQPSIYN 434
M T N+ A + VLI CK++ A LL L +I+ +PS YN
Sbjct: 419 LKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDTLEMEPSAYN 478
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+I+ C +G +A + ++ ++ D+ LI GH +G PD+ K+++
Sbjct: 479 PIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDALNNLIRGHAKEGN-PDSSYEILKIMSRR 537
Query: 495 CSPDEITV-RILSSCLLKSGMPGEAARIKESLHEN 528
P E +L + G PG+A +S+ E+
Sbjct: 538 GVPRESNAYELLIKSYMSKGEPGDAKTALDSMVED 572
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 180/432 (41%), Gaps = 46/432 (10%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K FQ ++ L V + +YN L + + ++G + AK ++ M +G P ++
Sbjct: 206 KIFQKMKD-LGVERTIKSYNSLFKVILRRGRYMMAKRYFNKMVSEGVEPTRHTYNLMLWG 264
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
F L RL+ + + + + + ++ +++ + K+D+A LF E+ +
Sbjct: 265 FFLSLRLETALRFFEDMKTRGISPDDATFNTMINGFCRFKKMDEAEKLFVEMKGNKIGPS 324
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
++ ++ G + VD+ + MRS G P+ TY+TLL GLC ++ A+++LK
Sbjct: 325 VVSYTTMIKGYLAVDRVDDGLRIFEEMRSSGIEPNATTYSTLLPGLCDAGKMVEAKNILK 384
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
+ + +P K N+ F L+ K
Sbjct: 385 NM-MAKHIAP---------------------------------KDNSI-FLKLLVSQSKA 409
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI------- 391
G+M +A + K M P + + LIE C+ N + L + + I
Sbjct: 410 GDMAAATEVLKAMATLNVPAEAGHYGVLIENQCKASAYNRAIKLLDTLIEKEIILRHQDT 469
Query: 392 -SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
++ +I YLC + + +A L RQL + + Q ++ N++I G+ K GN D +
Sbjct: 470 LEMEPSAYNPIIEYLCNNGQTAKAEVLFRQLMKRGVQDQDAL-NNLIRGHAKEGNPDSSY 528
Query: 451 AIVVEMEEKCKP-DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
I+ M + P + + +LI + KG DA M+ G PD R + L
Sbjct: 529 EILKIMSRRGVPRESNAYELLIKSYMSKGEPGDAKTALDSMVEDGHVPDSSLFRSVIESL 588
Query: 510 LKSGMPGEAARI 521
+ G A+R+
Sbjct: 589 FEDGRVQTASRV 600
>AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain
protein 40 | chr3:5768401-5770380 REVERSE LENGTH=659
Length = 659
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 199/472 (42%), Gaps = 39/472 (8%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
V++ + + N+ L + FQ R +TYN+L+ +C+KG+ A L M +
Sbjct: 186 VIDALVKSNSLDLAYLKFQQMRSD-GCKPDRFTYNILIHGVCKKGVVDEAIRLVKQMEQE 244
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNA------------------- 184
G P+ L+ F + R+D + + L + K+ N
Sbjct: 245 GNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFVHGIFRCLPPCKA 304
Query: 185 ----------------VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
V YD +L L ++ + R++ ++STFN M
Sbjct: 305 FEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAKETGQFLRKIGERGYIPDSSTFNAAMSC 364
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
L D+ E + +G S G P Y L+ L + LK++G+ S
Sbjct: 365 LLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLS- 423
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
+V SY VI CK +++ A+ EM G PN TFN+ + G+ G++ G+
Sbjct: 424 SVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVL 483
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
+K+L HG PDV+TF+ +I CR ++ D + EM I + T+++LI C +
Sbjct: 484 EKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCST 543
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTF 467
+ L ++K + P YN I +CK V +A ++ M KPD FT+
Sbjct: 544 GDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTY 603
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC-LLKSGMPGEA 518
+ LI GR +A +F + GC PD T R++ L KSG+ E
Sbjct: 604 STLIKALSESGRESEAREMFSSIERHGCVPDSYTKRLVEELDLRKSGLSRET 655
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 115/522 (22%), Positives = 221/522 (42%), Gaps = 52/522 (9%)
Query: 45 SITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFT 104
+ + + WF+ + H L+TR V+ V++ +NP+ +F+ +
Sbjct: 52 QVIERKDWFLILNQEFTTHRIGLNTR------------FVISVLQNQDNPLHSLRFYLWV 99
Query: 105 REKLNVHHSFWTYNMLL-RSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALV 162
V+ + +L +L +KG L S +LL + +R G L+ L+ S+ +
Sbjct: 100 SNFDPVYAKDQSLKSVLGNALFRKGPLLLSMELLKE-IRDSGYRISDELMCVLIGSWGRL 158
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
++ A+ ++ + +Y+ ++ LVK N LD A F+++ + T+
Sbjct: 159 GLAKYCNDVFAQISFLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTY 218
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
N+L+ G+C G VDEA + + M G P++ TY L+ G VD A L+ + +
Sbjct: 219 NILIHGVCKKGVVDEAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRV 278
Query: 283 KSKFSPNVRSYTTVISG---------------------------------YC--KLSKMK 307
+ K +PN + T + G YC S K
Sbjct: 279 R-KLNPNEATIRTFVHGIFRCLPPCKAFEVLVGFMEKDSNLQRVGYDAVLYCLSNNSMAK 337
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
E ++ G P++ TFN+ + +K ++ I+ + G P + L+
Sbjct: 338 ETGQFLRKIGERGYIPDSSTFNAAMSCLLKGHDLVETCRIFDGFVSRGVKPGFNGYLVLV 397
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
+ + + G +M + +S+++++ +I LCK+ R++ A L +++ I
Sbjct: 398 QALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGIS 457
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
P +N + GY G+V + + ++ ++ KPD TF+++I C DA
Sbjct: 458 PNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDC 517
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
F +ML G P+EIT IL +G + ++ + EN
Sbjct: 518 FKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMKEN 559
>AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4670178-4672826 REVERSE
LENGTH=798
Length = 798
Score = 162 bits (409), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 208/461 (45%), Gaps = 20/461 (4%)
Query: 96 LGF----KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRL 151
LGF K F T K + S +++N+L+ LC G + A L M G PDS
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
L F L+ + + E++ + + + + Y LL + +D + L ++++
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 212 RSHSHLETST-FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
L + +V++ GLC G +DEA N M++ G SPD+V Y+ ++HGLC++ +
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D A L E+ K + PN R++ ++ G C+ + EA SL D + SG + +N
Sbjct: 415 DMALWLYDEMCDK-RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
+IDG+ K G ++ AL ++K ++ G P V TF SLI GYC+ + + +
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
++ S+ +++ L+ + +L R++K I P Y+ + G C+ + N
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 451 AIVVE-MEEKCK------------PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
++ E + EKCK PD+ T+ +I C A V M +
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 498 DEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
T IL L G +A SL E Q SL K Y
Sbjct: 654 SSATYNILIDSLCVYGYIRKADSFIYSLQE-QNVSLSKFAY 693
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 13/373 (3%)
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
+L FL S +VD S +L + + + V+ Y+++L + +K+ D +++E+
Sbjct: 129 MLLFLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEI 182
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
+ H T++ ++ GLC +++A FL P +V++N+++ G C++ V
Sbjct: 183 KDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D A+ V LK P+V S+ +I+G C + + EA L +M++ G +P++ T+N
Sbjct: 239 DMAKSFFCTV-LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
L GF +G + A + + ML G PDV+T+T L+ G C++G ++ GL L +M +R
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 391 ISA-SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
S+ SV++S LCK+ R+ EA L Q+K + P Y+ VI G CK G D A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 450 NAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
+ EM +++ P+ T L+ G C KG +A + ++++G + D + I+
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 509 LLKSGMPGEAARI 521
KSG EA +
Sbjct: 478 YAKSGCIEEALEL 490
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 21/396 (5%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
TY +LL CQ G + LL D + +L ++S R+D + L +
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 388
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + + V Y ++ L K K D A+ L+ E+ + T L+ GLC G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ EA L+ + S G + DIV YN ++ G + ++ A +L K V +++ +P+V ++
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV-IETGITPSVATFN 507
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++I GYCK + EA + D + G P+ ++ +L+D + GN S + ++M
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 355 GCPPDVVTFTSLIEGYCR---------------VGKVNYGLDLWHEMNTRNISASLHTFS 399
G PP VT++ + +G CR K GL +M + I T++
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL---RDMESEGIPPDQITYN 624
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+I YLC+ L A L +K ++ + YN +ID C G + +A++ + ++E+
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684
Query: 460 -CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
KF +T LI HC+KG A+ +F+++L G
Sbjct: 685 NVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 3/344 (0%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
+L+ + L ++ + + V +++++S K +D A F +++ + N
Sbjct: 202 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHN 261
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+L+ GLC G + EA + + M G PD VTYN L G + + A ++++++ L
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM-LD 320
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS-LIDGFVKVGNMD 342
SP+V +YT ++ G C+L + L +M G + N+ S ++ G K G +D
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
AL ++ +M G PD+V ++ +I G C++GK + L L+ EM + I + T L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCK 461
LC+ L EAR LL L + +YN VIDGY KSG ++EA + V +E
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
P TF LI G+C +A I + G +P ++ L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 195/427 (45%), Gaps = 19/427 (4%)
Query: 89 KRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPD 148
++L + +L F T E ++ S ++N ++ C+ G AK + + G +P
Sbjct: 201 QKLEDAVL----FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 149 SRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
L++ LV + + EL ++ + V+ ++V Y+ L + A + R
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD-IVTYNTLLHGLCRI 267
+++ + T+ +L+ G C G++D L M S G + I+ + +L GLC+
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 268 KEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
+D A L ++ SP++ +Y+ VI G CKL K A L+DEM PN+ T
Sbjct: 377 GRIDEALSLFNQMK-ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
+L+ G + G + A + ++ G D+V + +I+GY + G + L+L+ +
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
I+ S+ TF+ LI CK+ + EAR +L +K + P Y ++D Y GN
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Query: 448 EANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDA-----IVIFYK-------MLATG 494
+ + EM+ E P T++++ G C + + IF K M + G
Sbjct: 556 SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEG 615
Query: 495 CSPDEIT 501
PD+IT
Sbjct: 616 IPPDQIT 622
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 147/342 (42%), Gaps = 54/342 (15%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
Y++++ LC+ G A LYD M LP+SR G L+ L ++ LL
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ V+Y+ ++ K +++A+ LF+ ++ + +TFN L+ G C ++
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEVDRARDLLKEVGLKSKFSPNVRS 292
EA K L+ ++ +G +P +V+Y TL+ K +D R +K G+ P +
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI----PPTNVT 575
Query: 293 YTTVISGYCKLSKMKEASSLFDE------------MDRSGTKPNAFTFNSLIDGFVKVG- 339
Y+ + G C+ K + + + E M+ G P+ T+N++I +V
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 635
Query: 340 --------------NMDSALGIYKKMLFHGCPPDVV--------------------TFTS 365
N+D++ Y ++ C + +T+
Sbjct: 636 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
LI+ +C G + L+H++ R + S+ +S +I+ LC+
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4669784-4672826 REVERSE
LENGTH=806
Length = 806
Score = 162 bits (409), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 125/461 (27%), Positives = 208/461 (45%), Gaps = 20/461 (4%)
Query: 96 LGF----KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRL 151
LGF K F T K + S +++N+L+ LC G + A L M G PDS
Sbjct: 235 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 294
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
L F L+ + + E++ + + + + Y LL + +D + L ++++
Sbjct: 295 YNILAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDML 354
Query: 212 RSHSHLETST-FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
L + +V++ GLC G +DEA N M++ G SPD+V Y+ ++HGLC++ +
Sbjct: 355 SRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKF 414
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D A L E+ K + PN R++ ++ G C+ + EA SL D + SG + +N
Sbjct: 415 DMALWLYDEMCDK-RILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNI 473
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
+IDG+ K G ++ AL ++K ++ G P V TF SLI GYC+ + + +
Sbjct: 474 VIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYG 533
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
++ S+ +++ L+ + +L R++K I P Y+ + G C+ + N
Sbjct: 534 LAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCN 593
Query: 451 AIVVE-MEEKCK------------PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
++ E + EKCK PD+ T+ +I C A V M +
Sbjct: 594 HVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKHLSGAFVFLEIMKSRNLDA 653
Query: 498 DEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
T IL L G +A SL E Q SL K Y
Sbjct: 654 SSATYNILIDSLCVYGYIRKADSFIYSLQE-QNVSLSKFAY 693
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 110/373 (29%), Positives = 194/373 (52%), Gaps = 13/373 (3%)
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
+L FL S +VD S +L + + + V+ Y+++L + +K+ D +++E+
Sbjct: 129 MLLFLSSRLRMVDD---SLYILKKMKDQNLNVSTQSYNSVLYHFRETDKMWD---VYKEI 182
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
+ H T++ ++ GLC +++A FL P +V++N+++ G C++ V
Sbjct: 183 KDKNEH----TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFV 238
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D A+ V LK P+V S+ +I+G C + + EA L +M++ G +P++ T+N
Sbjct: 239 DMAKSFFCTV-LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNI 297
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
L GF +G + A + + ML G PDV+T+T L+ G C++G ++ GL L +M +R
Sbjct: 298 LAKGFHLLGMISGAWEVIRDMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRG 357
Query: 391 ISA-SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
S+ SV++S LCK+ R+ EA L Q+K + P Y+ VI G CK G D A
Sbjct: 358 FELNSIIPCSVMLSGLCKTGRIDEALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMA 417
Query: 450 NAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
+ EM +++ P+ T L+ G C KG +A + ++++G + D + I+
Sbjct: 418 LWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDG 477
Query: 509 LLKSGMPGEAARI 521
KSG EA +
Sbjct: 478 YAKSGCIEEALEL 490
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 187/396 (47%), Gaps = 21/396 (5%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
TY +LL CQ G + LL D + +L ++S R+D + L +
Sbjct: 329 TYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRIDEALSLFNQ 388
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + + V Y ++ L K K D A+ L+ E+ + T L+ GLC G
Sbjct: 389 MKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGM 448
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ EA L+ + S G + DIV YN ++ G + ++ A +L K V +++ +P+V ++
Sbjct: 449 LLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVV-IETGITPSVATFN 507
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++I GYCK + EA + D + G P+ ++ +L+D + GN S + ++M
Sbjct: 508 SLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAE 567
Query: 355 GCPPDVVTFTSLIEGYCR---------------VGKVNYGLDLWHEMNTRNISASLHTFS 399
G PP VT++ + +G CR K GL +M + I T++
Sbjct: 568 GIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGL---RDMESEGIPPDQITYN 624
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+I YLC+ L A L +K ++ + YN +ID C G + +A++ + ++E+
Sbjct: 625 TIIQYLCRVKHLSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQ 684
Query: 460 -CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
KF +T LI HC+KG A+ +F+++L G
Sbjct: 685 NVSLSKFAYTTLIKAHCVKGDPEMAVKLFHQLLHRG 720
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 168/344 (48%), Gaps = 3/344 (0%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
+L+ + L ++ + + V +++++S K +D A F +++ + N
Sbjct: 202 KLEDAVLFLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPSVYSHN 261
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+L+ GLC G + EA + + M G PD VTYN L G + + A ++++++ L
Sbjct: 262 ILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIRDM-LD 320
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS-LIDGFVKVGNMD 342
SP+V +YT ++ G C+L + L +M G + N+ S ++ G K G +D
Sbjct: 321 KGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKTGRID 380
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
AL ++ +M G PD+V ++ +I G C++GK + L L+ EM + I + T L+
Sbjct: 381 EALSLFNQMKADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALL 440
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCK 461
LC+ L EAR LL L + +YN VIDGY KSG ++EA + V +E
Sbjct: 441 LGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGIT 500
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
P TF LI G+C +A I + G +P ++ L
Sbjct: 501 PSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTL 544
Score = 139 bits (349), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 195/427 (45%), Gaps = 19/427 (4%)
Query: 89 KRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPD 148
++L + +L F T E ++ S ++N ++ C+ G AK + + G +P
Sbjct: 201 QKLEDAVL----FLRTSEWKDIGPSVVSFNSIMSGYCKLGFVDMAKSFFCTVLKCGLVPS 256
Query: 149 SRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
L++ LV + + EL ++ + V+ ++V Y+ L + A + R
Sbjct: 257 VYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILAKGFHLLGMISGAWEVIR 316
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD-IVTYNTLLHGLCRI 267
+++ + T+ +L+ G C G++D L M S G + I+ + +L GLC+
Sbjct: 317 DMLDKGLSPDVITYTILLCGQCQLGNIDMGLVLLKDMLSRGFELNSIIPCSVMLSGLCKT 376
Query: 268 KEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
+D A L ++ SP++ +Y+ VI G CKL K A L+DEM PN+ T
Sbjct: 377 GRIDEALSLFNQMK-ADGLSPDLVAYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRT 435
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
+L+ G + G + A + ++ G D+V + +I+GY + G + L+L+ +
Sbjct: 436 HGALLLGLCQKGMLLEARSLLDSLISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVI 495
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
I+ S+ TF+ LI CK+ + EAR +L +K + P Y ++D Y GN
Sbjct: 496 ETGITPSVATFNSLIYGYCKTQNIAEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTK 555
Query: 448 EANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDA-----IVIFYK-------MLATG 494
+ + EM+ E P T++++ G C + + IF K M + G
Sbjct: 556 SIDELRREMKAEGIPPTNVTYSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEG 615
Query: 495 CSPDEIT 501
PD+IT
Sbjct: 616 IPPDQIT 622
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/342 (21%), Positives = 147/342 (42%), Gaps = 54/342 (15%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
Y++++ LC+ G A LYD M LP+SR G L+ L ++ LL
Sbjct: 400 AYSIVIHGLCKLGKFDMALWLYDEMCDKRILPNSRTHGALLLGLCQKGMLLEARSLLDSL 459
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ V+Y+ ++ K +++A+ LF+ ++ + +TFN L+ G C ++
Sbjct: 460 ISSGETLDIVLYNIVIDGYAKSGCIEEALELFKVVIETGITPSVATFNSLIYGYCKTQNI 519
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEVDRARDLLKEVGLKSKFSPNVRS 292
EA K L+ ++ +G +P +V+Y TL+ K +D R +K G+ P +
Sbjct: 520 AEARKILDVIKLYGLAPSVVSYTTLMDAYANCGNTKSIDELRREMKAEGI----PPTNVT 575
Query: 293 YTTVISGYCKLSKMKEASSLFDE------------MDRSGTKPNAFTFNSLIDGFVKVG- 339
Y+ + G C+ K + + + E M+ G P+ T+N++I +V
Sbjct: 576 YSVIFKGLCRGWKHENCNHVLRERIFEKCKQGLRDMESEGIPPDQITYNTIIQYLCRVKH 635
Query: 340 --------------NMDSALGIYKKMLFHGCPPDVV--------------------TFTS 365
N+D++ Y ++ C + +T+
Sbjct: 636 LSGAFVFLEIMKSRNLDASSATYNILIDSLCVYGYIRKADSFIYSLQEQNVSLSKFAYTT 695
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
LI+ +C G + L+H++ R + S+ +S +I+ LC+
Sbjct: 696 LIKAHCVKGDPEMAVKLFHQLLHRGFNVSIRDYSAVINRLCR 737
>AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:13844834-13846708 FORWARD
LENGTH=624
Length = 624
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 2/390 (0%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
V + ++ +++ LC++G +K L G P++ +++++ +
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
+L + + V N V Y L+ + VK+ K+ DA LF E+ + + L+
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C G++ AF + + G SP TY L+ G+C++ E+ A L+ E+ K
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V + T+I GYC+ + EAS ++D M++ G + + FT N++ F ++ D A
Sbjct: 400 V-VFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLF 458
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+M+ G V++T+LI+ YC+ G V L+ EM+++ + + T++V+I CK
Sbjct: 459 RMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQG 518
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFT 468
+++EAR L ++ + P Y +I G C + NVDEA + EM K + T+T
Sbjct: 519 KIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYT 578
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
++I+G G++ +A ++ +M G + D
Sbjct: 579 VMISGLSKAGKSDEAFGLYDEMKRKGYTID 608
Score = 151 bits (382), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 163/345 (47%), Gaps = 43/345 (12%)
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
K ++D + +FR ++ S + + +++ GLC G+V+++ K + G P+
Sbjct: 201 KRRRIDLCLEIFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAY 260
Query: 256 TYNTLLHGLCR--------------------------------------IKEVDRARDLL 277
TYNT+++ + + + ++ D +
Sbjct: 261 TYNTIINAYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEM 320
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+E G++S +V YT++IS C+ MK A LFDE+ G P+++T+ +LIDG K
Sbjct: 321 RERGIES----DVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCK 376
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
VG M +A + +M G V F +LI+GYCR G V+ ++ M + A + T
Sbjct: 377 VGEMGAAEILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFT 436
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
+ + S + R EA+ L ++ + Y ++ID YCK GNV+EA + VEM
Sbjct: 437 CNTIASCFNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMS 496
Query: 458 EK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
K +P+ T+ ++I +C +G+ +A + M A G PD T
Sbjct: 497 SKGVQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYT 541
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 165/368 (44%), Gaps = 2/368 (0%)
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
L +V ++ SK+L+ E ++ A Y+ +++ VK + + +
Sbjct: 227 LTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMK 286
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD 271
+ T+ +LM G + +A K + MR G D+ Y +L+ CR +
Sbjct: 287 KDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMK 346
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
RA L E+ K SP+ +Y +I G CK+ +M A L +EM G FN+L
Sbjct: 347 RAFLLFDELTEKG-LSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQVVFNTL 405
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
IDG+ + G +D A IY M G DV T ++ + R+ + + M +
Sbjct: 406 IDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRMMEGGV 465
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
S +++ LI CK ++EA+ L ++ + P YN +I YCK G + EA
Sbjct: 466 KLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARK 525
Query: 452 IVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
+ ME PD +T+T LI G C+ +A+ +F +M G + +T ++ S L
Sbjct: 526 LRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLS 585
Query: 511 KSGMPGEA 518
K+G EA
Sbjct: 586 KAGKSDEA 593
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/446 (25%), Positives = 183/446 (41%), Gaps = 60/446 (13%)
Query: 14 LSLFTRIQASKIALARCFTLTQLTYASCDKGSITK--------------PEAWFVKIVST 59
L +F R+ S + + ++LT + C +G + K PEA+ +
Sbjct: 209 LEIFRRMVDSGVKIT-VYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIIN 267
Query: 60 LFLHSNSLDT-----RVLSYFG---KHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVH 111
++ +V+ G +T +L++E+ + K F RE+ +
Sbjct: 268 AYVKQRDFSGVEGVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRER-GIE 326
Query: 112 HSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
Y L+ C+KG A LL+D + G P S G L+ V + ++ L
Sbjct: 327 SDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEIL 386
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+ E Q V + VV FN L+ G C
Sbjct: 387 MNEMQSKGVNITQVV-----------------------------------FNTLIDGYCR 411
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G VDEA + M G D+ T NT+ R+K D A+ L + ++ +
Sbjct: 412 KGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM-MEGGVKLSTV 470
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
SYT +I YCK ++EA LF EM G +PNA T+N +I + K G + A + M
Sbjct: 471 SYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIKEARKLRANM 530
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+G PD T+TSLI G C V+ + L+ EM + + + T++V+IS L K+ +
Sbjct: 531 EANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMISGLSKAGKS 590
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVI 437
EA L ++KR +Y +I
Sbjct: 591 DEAFGLYDEMKRKGYTIDNKVYTALI 616
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
V + TYN+++ + C++G A+ L M +G PDS L+ + D +D +
Sbjct: 500 VQPNAITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAM 559
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
L +E + N+V Y ++S L K K D+A L+ E+ R ++ + L+G +
Sbjct: 560 RLFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619
Query: 230 CS 231
S
Sbjct: 620 HS 621
>AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29920334-29922676 REVERSE
LENGTH=780
Length = 780
Score = 160 bits (405), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 194/414 (46%), Gaps = 4/414 (0%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYD 138
L+ +++ V+K N LGF+FF + + + ++ +++ L + +
Sbjct: 58 LSKNIITSVIKDEVNRQLGFRFFIWASRRERLRSRE-SFGLVIDMLSEDNGCDLYWQTLE 116
Query: 139 CMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHN 198
++ G DS L+S++A + + + E + + + Y+ +L V+++
Sbjct: 117 ELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMKEFDCRPDVFTYNVILRVMMREE 176
Query: 199 KLDD-AICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTY 257
A ++ E+++ + TF +LM GL G +A K + M G SP+ VTY
Sbjct: 177 VFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTY 236
Query: 258 NTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMD 317
L+ GLC+ D AR L E+ + P+ ++ ++ G+CKL +M EA L +
Sbjct: 237 TILISGLCQRGSADDARKLFYEMQTSGNY-PDSVAHNALLDGFCKLGRMVEAFELLRLFE 295
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+ G ++SLIDG + A +Y ML PD++ +T LI+G + GK+
Sbjct: 296 KDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIE 355
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
L L M ++ IS + ++ +I LC L+E R L ++ T+ P + +I
Sbjct: 356 DALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILI 415
Query: 438 DGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
C++G V EA I E+E+ C P TF LI G C G +A ++ +KM
Sbjct: 416 CSMCRNGLVREAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKM 469
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 175/373 (46%), Gaps = 11/373 (2%)
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM 211
G ++ + + D+ + L E + V V++ + L+S K + A+ F +
Sbjct: 95 FGLVIDMLSEDNGCDLYWQTLEELKSGGVSVDSYCFCVLISAYAKMGMAEKAVESFGRMK 154
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDE-----AFKFLNGMRSFGCSPDIVTYNTLLHGLCR 266
+ T+NV++ + +E AF N M CSP++ T+ L+ GL +
Sbjct: 155 EFDCRPDVFTYNVILRVMMR----EEVFFMLAFAVYNEMLKCNCSPNLYTFGILMDGLYK 210
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
A+ + ++ + SPN +YT +ISG C+ +A LF EM SG P++
Sbjct: 211 KGRTSDAQKMFDDMTGRG-ISPNRVTYTILISGLCQRGSADDARKLFYEMQTSGNYPDSV 269
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
N+L+DGF K+G M A + + G + ++SLI+G R + +L+ M
Sbjct: 270 AHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANM 329
Query: 387 NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNV 446
+NI + +++LI L K+ ++++A LL + I P YN VI C G +
Sbjct: 330 LKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLL 389
Query: 447 DEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
+E ++ +EM E + PD T TILI C G +A IF ++ +GCSP T L
Sbjct: 390 EEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTEIEKSGCSPSVATFNAL 449
Query: 506 SSCLLKSGMPGEA 518
L KSG EA
Sbjct: 450 IDGLCKSGELKEA 462
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 179/388 (46%), Gaps = 8/388 (2%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K N + +T+ +L+ L +KG S A+ ++D M G P+ L+S D
Sbjct: 191 KCNCSPNLYTFGILMDGLYKKGRTSDAQKMFDDMTGRGISPNRVTYTILISGLCQRGSAD 250
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+++L E Q + ++V ++ LL K ++ +A L R + L ++ L+
Sbjct: 251 DARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLFEKDGFVLGLRGYSSLI 310
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GL A +AF+ M PDI+ Y L+ GL + +++ A LL + K
Sbjct: 311 DGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMPSKG-I 369
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
SP+ Y VI C ++E SL EM + + P+A T LI + G + A
Sbjct: 370 SPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEE 429
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL-----HTFSVL 401
I+ ++ GC P V TF +LI+G C+ G++ L H+M ASL H+ +
Sbjct: 430 IFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR-PASLFLRLSHSGNRS 488
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-C 460
+ +S + +A L T P YN +I+G+C++G++D A ++ ++ K
Sbjct: 489 FDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGL 548
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFY 488
PD T+ LI G GR +A +FY
Sbjct: 549 SPDSVTYNTLINGLHRVGREEEAFKLFY 576
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 183/383 (47%), Gaps = 23/383 (6%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y+ L+ L + ++ A LY M PD L L+ + +++ + +LL+
Sbjct: 306 YSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKIEDALKLLSSMP 365
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + Y+ ++ L L++ L E+ + S + T +L+ +C G V
Sbjct: 366 SKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVR 425
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK--EVG------LKSKFSP 288
EA + + GCSP + T+N L+ GLC+ E+ AR LL EVG L+ S
Sbjct: 426 EAEEIFTEIEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSG 485
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
N RS+ T++ L ++ + D +G+ P+ ++N LI+GF + G++D AL +
Sbjct: 486 N-RSFDTMVESGSILKAYRDLAHFAD----TGSSPDIVSYNVLINGFCRAGDIDGALKLL 540
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
+ G PD VT+ +LI G RVG+ L++ + + S + L+++ C+
Sbjct: 541 NVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKD--DFRHSPAVYRSLMTWSCRK 598
Query: 409 NRLQEARDL-LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFT- 466
++ A +L ++ LK+ + + + I+ K G + A ++E++ + D+ T
Sbjct: 599 RKVLVAFNLWMKYLKKISCLDDETA--NEIEQCFKEGETERALRRLIELD--TRKDELTL 654
Query: 467 --FTILIAGHCMKGRAPDAIVIF 487
+TI + G C GR +A+++F
Sbjct: 655 GPYTIWLIGLCQSGRFHEALMVF 677
Score = 114 bits (284), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 175/475 (36%), Gaps = 142/475 (29%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L+ LCQ+G A+ L+ M+ G PDS L+ F + R+ + ELL
Sbjct: 235 TYTILISGLCQRGSADDARKLFYEMQTSGNYPDSVAHNALLDGFCKLGRMVEAFELLRLF 294
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + + Y +L+ L + + A L+ +++ + + + +L+ GL AG +
Sbjct: 295 EKDGFVLGLRGYSSLIDGLFRARRYTQAFELYANMLKKNIKPDIILYTILIQGLSKAGKI 354
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGL------------------------------- 264
++A K L+ M S G SPD YN ++ L
Sbjct: 355 EDALKLLSSMPSKGISPDTYCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTIL 414
Query: 265 ----CRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL-------- 312
CR V A ++ E+ KS SP+V ++ +I G CK ++KEA L
Sbjct: 415 ICSMCRNGLVREAEEIFTEIE-KSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGR 473
Query: 313 ---------------FDEMDRSGT----------------KPNAFTFNSLIDGFVKVGNM 341
FD M SG+ P+ ++N LI+GF + G++
Sbjct: 474 PASLFLRLSHSGNRSFDTMVESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDI 533
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGY------------------------------- 370
D AL + + G PD VT+ +LI G
Sbjct: 534 DGALKLLNVLQLKGLSPDSVTYNTLINGLHRVGREEEAFKLFYAKDDFRHSPAVYRSLMT 593
Query: 371 --CRVGKVNYGLDLWH----------------------------------EMNTRNISAS 394
CR KV +LW E++TR +
Sbjct: 594 WSCRKRKVLVAFNLWMKYLKKISCLDDETANEIEQCFKEGETERALRRLIELDTRKDELT 653
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
L +++ + LC+S R EA + L+ I+ P +I G CK +D A
Sbjct: 654 LGPYTIWLIGLCQSGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAA 708
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 157/371 (42%), Gaps = 49/371 (13%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ YN ++++LC +GL + L M PD+ L+ S + ++E+ E
Sbjct: 374 YCYNAVIKALCGRGLLEEGRSLQLEMSETESFPDACTHTILICSMCRNGLVREAEEIFTE 433
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL------------------------ 210
+ + + ++ L+ L K +L +A L ++
Sbjct: 434 IEKSGCSPSVATFNALIDGLCKSGELKEARLLLHKMEVGRPASLFLRLSHSGNRSFDTMV 493
Query: 211 --------MRSHSHLETS-------TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
R +H + ++NVL+ G C AGD+D A K LN ++ G SPD V
Sbjct: 494 ESGSILKAYRDLAHFADTGSSPDIVSYNVLINGFCRAGDIDGALKLLNVLQLKGLSPDSV 553
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
TYNTL++GL R V R + K K F + Y ++++ C+ K+ A +L+ +
Sbjct: 554 TYNTLINGLHR---VGREEEAFKLFYAKDDFRHSPAVYRSLMTWSCRKRKVLVAFNLWMK 610
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT---FTSLIEGYCR 372
+ + + T N + F K G + AL ++++ D +T +T + G C+
Sbjct: 611 YLKKISCLDDETANEIEQCF-KEGETERAL---RRLIELDTRKDELTLGPYTIWLIGLCQ 666
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
G+ + L ++ + + I + + LI LCK +L A ++ + P +
Sbjct: 667 SGRFHEALMVFSVLREKKILVTPPSCVKLIHGLCKREQLDAAIEVFLYTLDNNFKLMPRV 726
Query: 433 YNHVIDGYCKS 443
N+++ +S
Sbjct: 727 CNYLLSSLLES 737
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 159 bits (402), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 159/335 (47%), Gaps = 2/335 (0%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V Y L+++ K K+ A+ + R + T+++++ G D AF
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M G PD++ YN ++ C + +DRA +KE+ K + P R++ +I GY K
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEM-QKLRHRPTTRTFMPIIHGYAKSG 603
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
M+ + +FD M R G P TFN LI+G V+ M+ A+ I +M G + T+T
Sbjct: 604 DMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYT 663
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+++GY VG + + + + + T+ L+ CKS R+Q A + +++
Sbjct: 664 KIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSAR 723
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDA 483
+I +YN +IDG+ + G+V EA ++ +M +E KPD T+T I+ G A
Sbjct: 724 NIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRA 783
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+M A G P+ T L ++ +P +A
Sbjct: 784 TQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 818
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/403 (23%), Positives = 183/403 (45%), Gaps = 8/403 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY L+ + G S A + M+ +G + + +++ F + + + +
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
++ + ++Y+N++S +D AI +E+ + T TF ++ G +GD+
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ + + MR GC P + T+N L++GL +++++A ++L E+ L + S N +YT
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTL-AGVSANEHTYTK 664
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ GY + +A F + G + FT+ +L+ K G M SAL + K+M
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARN 724
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
P + + LI+G+ R G V DL +M + +HT++ IS K+ + A
Sbjct: 725 IPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRAT 784
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGH 474
+ +++ + P Y +I G+ ++ ++A + EM+ KPDK + L+
Sbjct: 785 QTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSL 844
Query: 475 CMKGRAPDAIV------IFYKMLATGCSPDEITVRILSSCLLK 511
+ +A + I +M+ G D T S CL K
Sbjct: 845 LSRASIAEAYIYSGVMTICKEMVEAGLIVDMGTAVHWSKCLCK 887
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 93/403 (23%), Positives = 185/403 (45%), Gaps = 12/403 (2%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+ ++++ ++G A+ ++ MR G P SR+ L+ ++A+ +D + + + +
Sbjct: 312 FGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMK 371
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
++++ V Y ++ K + A F E R H L S + ++ C +++
Sbjct: 372 EEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNME 431
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL-----LKEVGLKSKFSPNVR 291
A + M G I Y+T++ G + D + L LKE G F+P V
Sbjct: 432 RAEALVREMEEEGIDAPIAIYHTMMDGYTMV--ADEKKGLVVFKRLKECG----FTPTVV 485
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y +I+ Y K+ K+ +A + M G K N T++ +I+GFVK+ + +A +++ M
Sbjct: 486 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 545
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+ G PDV+ + ++I +C +G ++ + EM + TF +I KS +
Sbjct: 546 VKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDM 605
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTIL 470
+ + ++ ++R VP +N +I+G + +++A I+ EM ++ T+T +
Sbjct: 606 RRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 665
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+ G+ G A F ++ G D T L KSG
Sbjct: 666 MQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSG 708
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 110/262 (41%), Gaps = 1/262 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+KL + T+ ++ + G + ++D MR G +P L++ ++
Sbjct: 581 QKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQM 640
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ + E+L E V N Y ++ A F L ++ T+ L
Sbjct: 641 EKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEAL 700
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ C +G + A M + + YN L+ G R +V A DL++++ K
Sbjct: 701 LKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMK-KEG 759
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
P++ +YT+ IS K M A+ +EM+ G KPN T+ +LI G+ + + AL
Sbjct: 760 VKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKAL 819
Query: 346 GIYKKMLFHGCPPDVVTFTSLI 367
Y++M G PD + L+
Sbjct: 820 SCYEEMKAMGIKPDKAVYHCLL 841
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 93/209 (44%), Gaps = 1/209 (0%)
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
+KP+ F ++ + + G+M A +++M G P +TSLI Y ++ L
Sbjct: 305 SKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEAL 364
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+M I SL T+SV++ K+ + A + KR SIY +I +
Sbjct: 365 SCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAH 424
Query: 441 CKSGNVDEANAIVVEMEEKCKPDKFT-FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
C++ N++ A A+V EMEE+ + ++ G+ M +V+F ++ G +P
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484
Query: 500 ITVRILSSCLLKSGMPGEAARIKESLHEN 528
+T L + K G +A + + E
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEE 513
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 102/252 (40%), Gaps = 42/252 (16%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+ + ++ Y + M A F+ M G P + + SLI + +MD AL
Sbjct: 307 PSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSC 366
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR---NISASLHTFSVLISY 404
+KM G +VT++ ++ G+ + G D W + R ++AS+ + +I
Sbjct: 367 VRKMKEEGIEMSLVTYSVIVGGFSKAGHAE-AADYWFDEAKRIHKTLNASI--YGKIIYA 423
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG------------------------- 439
C++ ++ A L+R+++ I +IY+ ++DG
Sbjct: 424 HCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPT 483
Query: 440 ----------YCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
Y K G + +A + M EE K + T++++I G +A +F
Sbjct: 484 VVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFE 543
Query: 489 KMLATGCSPDEI 500
M+ G PD I
Sbjct: 544 DMVKEGMKPDVI 555
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 156 bits (395), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 115/408 (28%), Positives = 194/408 (47%), Gaps = 16/408 (3%)
Query: 75 FGKHLTPSLV-----LEVVKRLNNPILGFKFFQFTREKLNVHH---SFWTYNMLLRSLCQ 126
+ L PSL+ ++ + NP FK RE++ H S T+N LL+ L +
Sbjct: 241 LARRLLPSLITYNTLIDGYCKAGNPEKSFK----VRERMKADHIEPSLITFNTLLKGLFK 296
Query: 127 KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVV 186
G+ A+ + M+ G +PD+ L ++ ++ + + + A + V++NA
Sbjct: 297 AGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYT 356
Query: 187 YDNLLSVLVKHNKLDDAI-CLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
LL+ L K K++ A L RE+ + E +N ++ G C GD+ A + M
Sbjct: 357 CSILLNALCKEGKIEKAEEILGREMAKGLVPNEV-IYNTMIDGYCRKGDLVGARMKIEAM 415
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
G PD + YN L+ C + E++ A + ++ LK SP+V +Y +I GY + +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKG-VSPSVETYNILIGGYGRKYE 474
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ + EM+ +GT PN ++ +LI+ K + A + + M G P V +
Sbjct: 475 FDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNM 534
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
LI+G C GK+ EM + I +L T++ LI L + +L EA DLL ++ R
Sbjct: 535 LIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG 594
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIA 472
+ P YN +I GY +GNV A+ EM+ KP T+ +LI+
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS 642
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/497 (24%), Positives = 218/497 (43%), Gaps = 45/497 (9%)
Query: 55 KIVSTLFLHSNSLDTRVLSY-FGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHS 113
++ +FL+ D R + +GK + ++ L V + G + F + ++ S
Sbjct: 161 RVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGK------GLELFNRMKHD-RIYPS 213
Query: 114 FWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
+ YN+L+ LC+ + A+ L+D M LP L+ + + S ++
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ + ++ + + ++ LL L K ++DA + +E+ + TF++L G S
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
+ A G + T + LL+ LC+ ++++A ++L K PN Y
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG-LVPNEVIY 392
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
T+I GYC+ + A + M++ G KP+ +N LI F ++G M++A KM
Sbjct: 393 NTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
G P V T+ LI GY R + + D+ EM ++ ++ LI+ LCK ++L E
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 512
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD-------------------------- 447
A+ + R ++ + P+ IYN +IDG C G ++
Sbjct: 513 AQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLID 572
Query: 448 ---------EANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
EA +++E+ K KPD FT+ LI+G+ G I ++ +M +G P
Sbjct: 573 GLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKP 632
Query: 498 DEITVRILSSCLLKSGM 514
T +L S K G+
Sbjct: 633 TLKTYHLLISLCTKEGI 649
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 152/317 (47%), Gaps = 2/317 (0%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
LL LVK + I +F ++ S + + DV + + N M+
Sbjct: 150 LLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDR 209
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
P + YN L+ GLC+ K ++ A L E+ L + P++ +Y T+I GYCK +++
Sbjct: 210 IYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM-LARRLLPSLITYNTLIDGYCKAGNPEKS 268
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
+ + M +P+ TFN+L+ G K G ++ A + K+M G PD TF+ L +G
Sbjct: 269 FKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDG 328
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
Y K L ++ + + +T S+L++ LCK ++++A ++L + +VP
Sbjct: 329 YSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPN 388
Query: 430 PSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
IYN +IDGYC+ G++ A + ME++ KPD + LI C G +A
Sbjct: 389 EVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVN 448
Query: 489 KMLATGCSPDEITVRIL 505
KM G SP T IL
Sbjct: 449 KMKLKGVSPSVETYNIL 465
Score = 142 bits (359), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 169/382 (44%), Gaps = 32/382 (8%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
EK + YN L+R C+ G +A+ + M+ G P L+ +
Sbjct: 416 EKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEF 475
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
D ++L E + N N V Y L++ L K +KL +A + R++ + +N+L
Sbjct: 476 DKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNML 535
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G CS G +++AF+F M G ++VTYNTL+ GL ++ A DLL E+ K
Sbjct: 536 IDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKG- 594
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP---------------------- 323
P+V +Y ++ISGY ++ +L++EM RSG KP
Sbjct: 595 LKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEGIELTER 654
Query: 324 ---------NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
+ +N ++ + G+M+ A + K+M+ D T+ SLI G +VG
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
K+ L EMN R + T+++++ C+ A R+++ + I N
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREMQEKGFLLDVCIGN 774
Query: 435 HVIDGYCKSGNVDEANAIVVEM 456
++ G + EA ++ EM
Sbjct: 775 ELVSGLKEEWRSKEAEIVISEM 796
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 181/397 (45%), Gaps = 39/397 (9%)
Query: 160 ALVDRLDVSK--ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
A V DV K EL + +++ + +Y+ L+ L K +++DA LF E++
Sbjct: 188 AAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLP 247
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
T+N L+ G C AG+ +++FK M++ P ++T+NTLL GL + V+ A ++L
Sbjct: 248 SLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVL 307
Query: 278 KEVGLKSKFSPNVRSYTTVISGY-----------------------------------CK 302
KE+ F P+ +++ + GY CK
Sbjct: 308 KEMK-DLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCK 366
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
K+++A + G PN +N++IDG+ + G++ A + M G PD +
Sbjct: 367 EGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLA 426
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+ LI +C +G++ ++M + +S S+ T+++LI + + D+L++++
Sbjct: 427 YNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEME 486
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAP 481
+P Y +I+ CK + EA + +ME++ P + +LI G C KG+
Sbjct: 487 DNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIE 546
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
DA +ML G + +T L L +G EA
Sbjct: 547 DAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEA 583
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/440 (23%), Positives = 200/440 (45%), Gaps = 4/440 (0%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
F F+ ++ H F +Y +L L + + S A L+ +R +G P S L L+
Sbjct: 96 FSAFSLSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIYPSSDSLTLLLDHL 154
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
+ V+ + + + + +Y + VK + + + LF + +
Sbjct: 155 VKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSV 214
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
+NVL+ GLC +++A + + M + P ++TYNTL+ G C+ +++ ++E
Sbjct: 215 FIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFK-VRE 273
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
P++ ++ T++ G K +++A ++ EM G P+AFTF+ L DG+
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
++ALG+Y+ + G + T + L+ C+ GK+ ++ + + + ++
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+I C+ L AR + +++ + P YN +I +C+ G ++ A V +M+ K
Sbjct: 394 TMIDGYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLK 453
Query: 460 -CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
P T+ ILI G+ K I +M G P+ ++ L +CL K EA
Sbjct: 454 GVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEA 513
Query: 519 ARIKESLHENQGDSLKKSYY 538
+K + E++G S K Y
Sbjct: 514 QIVKRDM-EDRGVSPKVRIY 532
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 152/335 (45%), Gaps = 24/335 (7%)
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
L VL++ N+++ A + L+RS S S + S+ + F +L
Sbjct: 62 LRVLLQQNRIETARGVLSSLLRSDSTPFASPKELFSAFSLSSPSLKHDFSYL-------- 113
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSKMK 307
+ LL+ K + A DL L+ G+ P+ S T ++ K + +
Sbjct: 114 -----LLSVLLN---ESKMISEAADLFFALRNEGI----YPSSDSLTLLLDHLVKTKQFR 161
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
++F + S +P+ F + I VK+ ++ L ++ +M P V + LI
Sbjct: 162 VTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLI 221
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
+G C+ ++N L+ EM R + SL T++ LI CK+ +++ + ++K I
Sbjct: 222 DGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIE 281
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVI 486
P +N ++ G K+G V++A ++ EM++ PD FTF+IL G+ +A A+ +
Sbjct: 282 PSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGV 341
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ + +G + T IL + L K G +A I
Sbjct: 342 YETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEI 376
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 123/291 (42%), Gaps = 42/291 (14%)
Query: 101 FQFTREKL--NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
F+F++E L + + TYN L+ L G
Sbjct: 549 FRFSKEMLKKGIELNLVTYNTLIDGLSMTG------------------------------ 578
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
+L +++LL E ++ + Y++L+S + I L+ E+ RS
Sbjct: 579 -----KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPT 633
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
T+++L+ LC+ ++ + M PD++ YN +LH ++++A +L K
Sbjct: 634 LKTYHLLI-SLCTKEGIELTERLFGEM---SLKPDLLVYNGVLHCYAVHGDMEKAFNLQK 689
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
++ KS + +Y ++I G K+ K+ E SL DEM+ +P A T+N ++ G +V
Sbjct: 690 QMIEKS-IGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEV 748
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
+ SA Y++M G DV L+ G + + EMN R
Sbjct: 749 KDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799
>AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:4447647-4449200 FORWARD
LENGTH=517
Length = 517
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 205/453 (45%), Gaps = 44/453 (9%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF----LVSSFALVDRLDVSKE 170
+ YN + L ++ A+ +Y +D K L+ F +S V + D+
Sbjct: 45 FDYNRFIGVLVRESRFELAEAIY----WDMKPMGFSLIPFTYSRFISGLCKVKKFDLIDA 100
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
LL++ + + ++ L +L + NK+ A+ F +++ + ++ +L+ GL
Sbjct: 101 LLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLF 160
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
AG V +A + N M G SPD L+ GLC ++VD A +++ E ++ +
Sbjct: 161 RAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLST 220
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
Y +ISG+CK ++++A +L M + G +P+ T+N L++ + + A G+ +
Sbjct: 221 VVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAE 280
Query: 351 MLFHGC-------------------------------PP----DVVTFTSLIEGYCRVGK 375
M+ G P DVV++++LIE +CR
Sbjct: 281 MVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCDVVSYSTLIETFCRASN 340
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
L+ EM + + ++ T++ LI + A+ LL Q+ + P Y
Sbjct: 341 TRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTT 400
Query: 436 VIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
++D CKSGNVD+A + +M E + PD ++ LI+G C GR +AI +F M
Sbjct: 401 ILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKE 460
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
C PDE+T + + L++ A ++ + + +
Sbjct: 461 CCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMD 493
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/410 (26%), Positives = 194/410 (47%), Gaps = 9/410 (2%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E L W +N+ L LC++ A + CM G+ PD L++ ++
Sbjct: 106 ETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKV 165
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRS-HSHLETSTFNV 224
+ E+ + V + L+ L K+D A + E ++S L T +N
Sbjct: 166 TDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNA 225
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ G C AG +++A + M GC PD+VTYN LL+ + RA ++ E+ ++S
Sbjct: 226 LISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEM-VRS 284
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASS-LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ SY ++ +C++S + + + EM+ G + ++++LI+ F + N
Sbjct: 285 GIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGF-CDVVSYSTLIETFCRASNTRK 343
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
A ++++M G +VVT+TSLI+ + R G + L +M +S ++ ++
Sbjct: 344 AYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILD 403
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKP 462
+LCKS + +A + + +I P YN +I G C+SG V EA + +M+ K C P
Sbjct: 404 HLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCP 463
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
D+ TF +I G + A ++ +M+ G + D R +S L+K+
Sbjct: 464 DELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLD----RDVSDTLIKA 509
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/363 (23%), Positives = 160/363 (44%), Gaps = 39/363 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+Y +L+ L + G + A +++ M G PD++ LV ++D++ E++AE
Sbjct: 151 SYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEE 210
Query: 176 -QCNKVQVNAVVYDNLLSVLVKHNKLDDAICL---------------------------- 206
+ +V+++ VVY+ L+S K +++ A L
Sbjct: 211 IKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNM 270
Query: 207 -------FRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL-NGMRSFGCSPDIVTYN 258
E++RS L+ ++N L+ C D+ + F+ M G D+V+Y+
Sbjct: 271 LKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYS 329
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
TL+ CR +A L +E+ K NV +YT++I + + A L D+M
Sbjct: 330 TLIETFCRASNTRKAYRLFEEMRQKG-MVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTE 388
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G P+ + +++D K GN+D A G++ M+ H PD +++ SLI G CR G+V
Sbjct: 389 LGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTE 448
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
+ L+ +M + TF +I L + +L A + Q+ + + +I
Sbjct: 449 AIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIK 508
Query: 439 GYC 441
C
Sbjct: 509 ASC 511
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/365 (23%), Positives = 168/365 (46%), Gaps = 3/365 (0%)
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
+D + ++ E + + +V + Y+ + VLV+ ++ + A ++ ++ L T++
Sbjct: 25 IDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDMKPMGFSLIPFTYSR 84
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
+ GLC D L+ M + G PDI +N L LCR +V A + +
Sbjct: 85 FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
+ P+V SYT +I+G + K+ +A +++ M RSG P+ +L+ G +D A
Sbjct: 145 R-EPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLA 203
Query: 345 LGIYKKMLFHG-CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
+ + + V + +LI G+C+ G++ L M+ L T++VL++
Sbjct: 204 YEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLN 263
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA-NAIVVEMEEKCKP 462
Y +N L+ A ++ ++ R+ I YN ++ +C+ + D+ N +V EME +
Sbjct: 264 YYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC 323
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
D +++ LI C A +F +M G + +T L L+ G A ++
Sbjct: 324 DVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLL 383
Query: 523 ESLHE 527
+ + E
Sbjct: 384 DQMTE 388
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 95/251 (37%), Gaps = 37/251 (14%)
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y + I+ K + A +FDEM S + +F +N I V+ + A IY M
Sbjct: 11 AYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWDM 70
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR- 410
G T++ I G C+V K + L +M T + F+V + LC+ N+
Sbjct: 71 KPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKV 130
Query: 411 ----------LQEARD------------LLRQLKRTDIV------------PQPSIYNHV 436
+Q R+ L R K TD V P +
Sbjct: 131 GFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAAL 190
Query: 437 IDGYCKSGNVDEANAIVVE--MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+ G C + VD A +V E + K + LI+G C GR A + M G
Sbjct: 191 VVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIG 250
Query: 495 CSPDEITVRIL 505
C PD +T +L
Sbjct: 251 CEPDLVTYNVL 261
>AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 198/434 (45%), Gaps = 20/434 (4%)
Query: 48 KPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNP-ILGFKFFQFTRE 106
+P+ + V+ H D L+ HL V V+ ++ +L +FF + +
Sbjct: 48 EPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKT 107
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLL----------------YDCMRFDGKLPDS- 149
+ HS T+ ++L +L + SA+ + +D + + + DS
Sbjct: 108 RNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDST 167
Query: 150 -RLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
R+ L +FA + + + + + + + +S L+ ++D A+ +R
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
E+ R T N++M G C +G +D+ + L M G V+YNTL+ G C
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+ A L +G KS PNV ++ T+I G+C+ K++EAS +F EM PN T+
Sbjct: 288 LLSSALKLKNMMG-KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N+LI+G+ + G+ + A Y+ M+ +G D++T+ +LI G C+ K E++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
N+ + TFS LI C +L + + R+ P +N ++ +C++ + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 449 ANAIVVEMEEKCKP 462
A+ ++ EM + P
Sbjct: 467 ASQVLREMVRRSIP 480
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
F+SL F + +A + +M +G P V + + + G+V+ L + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
IS + +T ++++S C+S +L + +LL+ ++R YN +I G+C+ G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 448 EANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILS 506
A + M + +P+ TF LI G C + +A +F +M A +P+ +T L
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 507 SCLLKSGMPGEAARIKESL 525
+ + G A R E +
Sbjct: 351 NGYSQQGDHEMAFRFYEDM 369
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 339 GNMDSALGIYKKMLF--HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
G +D ++ +L+ C F SL + + + K D + +M ++
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+ + +S L R+ A R+++R I P P N V+ GYC+SG +D+ ++ +M
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 457 EE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
E + ++ LIAGHC KG A+ + M +G P+ +T L ++
Sbjct: 265 ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 516 GEAARI 521
EA+++
Sbjct: 325 QEASKV 330
>AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:13454853-13456418 FORWARD
LENGTH=521
Length = 521
Score = 155 bits (392), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 198/434 (45%), Gaps = 20/434 (4%)
Query: 48 KPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNP-ILGFKFFQFTRE 106
+P+ + V+ H D L+ HL V V+ ++ +L +FF + +
Sbjct: 48 EPKGQDLDFVNVAHSHLIQSDWDKLNKLSDHLDSFRVKNVLLKIQKDYLLSLEFFNWAKT 107
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLL----------------YDCMRFDGKLPDS- 149
+ HS T+ ++L +L + SA+ + +D + + + DS
Sbjct: 108 RNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFDALLYSYRECDST 167
Query: 150 -RLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
R+ L +FA + + + + + + + +S L+ ++D A+ +R
Sbjct: 168 PRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYR 227
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
E+ R T N++M G C +G +D+ + L M G V+YNTL+ G C
Sbjct: 228 EMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKG 287
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+ A L +G KS PNV ++ T+I G+C+ K++EAS +F EM PN T+
Sbjct: 288 LLSSALKLKNMMG-KSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTY 346
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N+LI+G+ + G+ + A Y+ M+ +G D++T+ +LI G C+ K E++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDK 406
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
N+ + TFS LI C +L + + R+ P +N ++ +C++ + D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRKNADRGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDG 466
Query: 449 ANAIVVEMEEKCKP 462
A+ ++ EM + P
Sbjct: 467 ASQVLREMVRRSIP 480
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 1/199 (0%)
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
F+SL F + +A + +M +G P V + + + G+V+ L + EM
Sbjct: 171 FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMR 230
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
IS + +T ++++S C+S +L + +LL+ ++R YN +I G+C+ G +
Sbjct: 231 RCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLS 290
Query: 448 EANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILS 506
A + M + +P+ TF LI G C + +A +F +M A +P+ +T L
Sbjct: 291 SALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLI 350
Query: 507 SCLLKSGMPGEAARIKESL 525
+ + G A R E +
Sbjct: 351 NGYSQQGDHEMAFRFYEDM 369
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 3/186 (1%)
Query: 339 GNMDSALGIYKKMLF--HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
G +D ++ +L+ C F SL + + + K D + +M ++
Sbjct: 145 GGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVE 204
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+ + +S L R+ A R+++R I P P N V+ GYC+SG +D+ ++ +M
Sbjct: 205 SCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELLQDM 264
Query: 457 EE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
E + ++ LIAGHC KG A+ + M +G P+ +T L ++
Sbjct: 265 ERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCRAMKL 324
Query: 516 GEAARI 521
EA+++
Sbjct: 325 QEASKV 330
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 117/433 (27%), Positives = 185/433 (42%), Gaps = 37/433 (8%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ L+ C++G A L+ M G PD L+ + L + +L ++A
Sbjct: 288 TFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQA 347
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V+++ VV+ + + V VK L A +++ ++ T+ +L+ GLC G +
Sbjct: 348 LHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRI 407
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EAF + G P IVTY++L+ G C+ + R+ L E +K + P+V Y
Sbjct: 408 YEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL-RSGFALYEDMIKMGYPPDVVIYGV 466
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ G K M A +M + N FNSLIDG+ ++ D AL +++ M +G
Sbjct: 467 LVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYG 526
Query: 356 CPPDVVTFT-----------------------------------SLIEGYCRVGKVNYGL 380
PDV TFT +LI+ +C+ K GL
Sbjct: 527 IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGL 586
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
L+ M ISA + +V+I L K +R+++A L + P YN +I GY
Sbjct: 587 QLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGY 646
Query: 441 CKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
C +DEA I ++ P+ T TILI C AI +F M G P+
Sbjct: 647 CSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNA 706
Query: 500 ITVRILSSCLLKS 512
+T L KS
Sbjct: 707 VTYGCLMDWFSKS 719
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 195/406 (48%), Gaps = 10/406 (2%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA----LV 162
K + S TY+ L+ C+ G S LY+ M G PD + G LV + ++
Sbjct: 419 KRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLML 478
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+ S ++L ++ +++N VV+++L+ + N+ D+A+ +FR + + +TF
Sbjct: 479 HAMRFSVKMLGQS----IRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATF 534
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
+M G ++EA M G PD + Y TL+ C+ + L ++
Sbjct: 535 TTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLF-DLMQ 593
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
++K S ++ VI K ++++AS F+ + +P+ T+N++I G+ + +D
Sbjct: 594 RNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLD 653
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A I++ + P+ VT T LI C+ ++ + ++ M + + T+ L+
Sbjct: 654 EAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLM 713
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCK 461
+ KS ++ + L +++ I P Y+ +IDG CK G VDEA I + ++ K
Sbjct: 714 DWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLL 773
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
PD + ILI G+C GR +A +++ ML G PD++ R LS
Sbjct: 774 PDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSE 819
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 196/449 (43%), Gaps = 44/449 (9%)
Query: 118 NMLLRSLCQKGLHSSAKLL---YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
N +L+ L + +++LL DC G P+ L++ F +D + +L
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDC----GPAPNVVTFCTLINGFCKRGEMDRAFDLFKV 311
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ ++ + + Y L+ K L LF + + L+ F+ + +GD
Sbjct: 312 MEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGD 371
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ A M G SP++VTY L+ GLC+ + A + ++ LK P++ +Y+
Sbjct: 372 LATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI-LKRGMEPSIVTYS 430
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++I G+CK ++ +L+++M + G P+ + L+DG K G M A+ KML
Sbjct: 431 SLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
+VV F SLI+G+CR+ + + L ++ M I + TF+ ++ RL+EA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCK-------------------SGNVDEANAIV-- 453
L ++ + + P Y +ID +CK S ++ N ++
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHL 610
Query: 454 ------VE---------MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+E +E K +PD T+ +I G+C R +A IF + T P+
Sbjct: 611 LFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPN 670
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHE 527
+T+ IL L K+ A R+ + E
Sbjct: 671 TVTLTILIHVLCKNNDMDGAIRMFSIMAE 699
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 177/414 (42%), Gaps = 2/414 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L++ LCQ G A +Y + G P L+ F L L +
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V+Y L+ L K + A+ +++ L FN L+ G C
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRF 512
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA K M +G PD+ T+ T++ ++ A L + K P+ +Y T
Sbjct: 513 DEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM-FKMGLEPDALAYCT 571
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I +CK K LFD M R+ + N +I K ++ A + ++
Sbjct: 572 LIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGK 631
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD+VT+ ++I GYC + +++ ++ + + T ++LI LCK+N + A
Sbjct: 632 MEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAI 691
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGH 474
+ + P Y ++D + KS +++ + + EM+EK P +++I+I G
Sbjct: 692 RMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGL 751
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
C +GR +A IF++ + PD + IL K G EAA + E + N
Sbjct: 752 CKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRN 805
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 168/368 (45%), Gaps = 35/368 (9%)
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
VD+++V+ LL+ N V + L++ K ++D A LF+ + + +
Sbjct: 264 VDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIA 323
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
++ L+ G AG + K + G D+V +++ + + ++ A + K +
Sbjct: 324 YSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRM- 382
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
L SPNV +YT +I G C+ ++ EA ++ ++ + G +P+ T++SLIDGF K GN+
Sbjct: 383 LCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNL 442
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
S +Y+ M+ G PPDVV + L++G + G + + + +M ++I ++ F+ L
Sbjct: 443 RSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSL 502
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK 461
I C+ NR EA + R + IY K
Sbjct: 503 IDGWCRLNRFDEALKVFRLM---------GIYG-------------------------IK 528
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
PD TFT ++ M+GR +A+ +F++M G PD + L K P ++
Sbjct: 529 PDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQL 588
Query: 522 KESLHENQ 529
+ + N+
Sbjct: 589 FDLMQRNK 596
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/305 (28%), Positives = 154/305 (50%), Gaps = 4/305 (1%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLE-TSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
+L+ L+ +++D F +L R S ++ L G+V +A F +
Sbjct: 187 MLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMER 246
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G IV+ N +L GL + +++ A LL V L +PNV ++ T+I+G+CK +M
Sbjct: 247 GFRVGIVSCNKVLKGL-SVDQIEVASRLLSLV-LDCGPAPNVVTFCTLINGFCKRGEMDR 304
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A LF M++ G +P+ +++LIDG+ K G + ++ + L G DVV F+S I+
Sbjct: 305 AFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTID 364
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
Y + G + ++ M + IS ++ T+++LI LC+ R+ EA + Q+ + + P
Sbjct: 365 VYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEP 424
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
Y+ +IDG+CK GN+ A+ +M + PD + +L+ G +G A+
Sbjct: 425 SIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFS 484
Query: 488 YKMLA 492
KML
Sbjct: 485 VKMLG 489
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
F F K+ + Y L+ + C+ + L+D M+ + D + ++
Sbjct: 552 FLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLL 611
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
R++ + + K++ + V Y+ ++ +LD+A +F L + T
Sbjct: 612 FKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNT 671
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
T +L+ LC D+D A + + M G P+ VTY L+ + +++ + L +E
Sbjct: 672 VTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEE 731
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ K SP++ SY+ +I G CK ++ EA+++F + + P+ + LI G+ KVG
Sbjct: 732 MQEKG-ISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVG 790
Query: 340 NMDSALGIYKKMLFHGCPPD 359
+ A +Y+ ML +G PD
Sbjct: 791 RLVEAALLYEHMLRNGVKPD 810
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 193/386 (50%), Gaps = 5/386 (1%)
Query: 119 MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCN 178
+++ L ++G SSA +++ ++ DG D L+S+FA R + + + + +
Sbjct: 178 IIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEED 237
Query: 179 KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDV-D 236
+ + Y+ +L+V K + I E M+S + T+N L+ C G +
Sbjct: 238 GCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLIT-CCKRGSLHQ 296
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + M++ G S D VTYN LL + A +L E+ L FSP++ +Y ++
Sbjct: 297 EAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSL 355
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
IS Y + + EA L ++M GTKP+ FT+ +L+ GF + G ++SA+ I+++M GC
Sbjct: 356 ISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGC 415
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P++ TF + I+ Y GK + ++ E+N +S + T++ L++ ++ E
Sbjct: 416 KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSG 475
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHC 475
+ +++KR VP+ +N +I Y + G+ ++A + M + PD T+ ++A
Sbjct: 476 VFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALA 535
Query: 476 MKGRAPDAIVIFYKMLATGCSPDEIT 501
G + + +M C P+E+T
Sbjct: 536 RGGMWEQSEKVLAEMEDGRCKPNELT 561
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 112/500 (22%), Positives = 210/500 (42%), Gaps = 26/500 (5%)
Query: 52 WFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFT------- 104
WF+K + NS+ ++S GK S + L + +T
Sbjct: 160 WFMKQKDYQSMLDNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFA 219
Query: 105 -----REKLNVHH---------SFWTYNMLLRSLCQKGL-HSSAKLLYDCMRFDGKLPDS 149
RE +NV + TYN++L + G + L + M+ DG PD+
Sbjct: 220 NSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDA 279
Query: 150 RLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRE 209
L++ + ++ E + + V Y+ LL V K ++ +A+ + E
Sbjct: 280 YTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNE 339
Query: 210 LMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE 269
++ + T+N L+ G +DEA + N M G PD+ TY TLL G R +
Sbjct: 340 MVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGK 399
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
V+ A + +E+ + PN+ ++ I Y K E +FDE++ G P+ T+N
Sbjct: 400 VESAMSIFEEM-RNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWN 458
Query: 330 SLIDGFVKVGNMDSAL-GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
+L+ F + G MDS + G++K+M G P+ TF +LI Y R G + ++ M
Sbjct: 459 TLLAVFGQNG-MDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLD 517
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
++ L T++ +++ L + +++ +L +++ P Y ++ Y +
Sbjct: 518 AGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGL 577
Query: 449 ANAIVVEMEEKCKPDKFTFTILIAGHCMK-GRAPDAIVIFYKMLATGCSPDEITVRILSS 507
+++ E+ + + C K P+A F ++ G SPD T+ + S
Sbjct: 578 MHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVS 637
Query: 508 CLLKSGMPGEAARIKESLHE 527
+ M +A + + + E
Sbjct: 638 IYGRRQMVAKANGVLDYMKE 657
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 134/566 (23%), Positives = 229/566 (40%), Gaps = 67/566 (11%)
Query: 15 SLFTRIQASKIALARCFTLTQLTYASCDKGSITKPEAW-FVKIVSTLFLHSNSLDTRVLS 73
SL ++++ IA +T L C +GS+ + A F ++ + F + +L
Sbjct: 265 SLVEKMKSDGIA-PDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 74 YFGKHLTPSLVLEVVKRLNNPIL-GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSS 132
+GK P E +K LN +L GF S TYN L+ + + G+
Sbjct: 323 VYGKSHRPK---EAMKVLNEMVLNGFS------------PSIVTYNSLISAYARDGMLDE 367
Query: 133 AKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE---AQC--NKVQVNA--- 184
A L + M G PD L+S F +++ + + E A C N NA
Sbjct: 368 AMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIK 427
Query: 185 ---------------------------VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
V ++ LL+V ++ + +F+E+ R+
Sbjct: 428 MYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVP 487
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
E TFN L+ G ++A M G +PD+ TYNT+L L R +++ +L
Sbjct: 488 ERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
E+ + PN +Y +++ Y ++ SL +E+ +P A +L+ K
Sbjct: 548 AEME-DGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSK 606
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR---VGKVNYGLDLWHEMNTRNISAS 394
+ A + ++ G PD+ T S++ Y R V K N LD M R + S
Sbjct: 607 CDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDY---MKERGFTPS 663
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
+ T++ L+ +S ++ ++LR++ I P YN VI YC++ + +A+ I
Sbjct: 664 MATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFS 723
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
EM PD T+ I + +AI + M+ GC P++ T + K
Sbjct: 724 EMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLN 783
Query: 514 MPGEAARIKESL-----HENQGDSLK 534
EA E L H +G+ L+
Sbjct: 784 RKDEAKLFVEDLRNLDPHAPKGEDLR 809
>AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19603828-19606287 FORWARD
LENGTH=819
Length = 819
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 110/454 (24%), Positives = 199/454 (43%), Gaps = 43/454 (9%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN ++ C+ G +A L++ ++ G +P G +++ F S LL+E +
Sbjct: 243 YNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVK 302
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG--- 233
++V+ +N++ +H D ++ + + +T+N+L+ LC G
Sbjct: 303 ERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKE 362
Query: 234 --------------------------------DVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
+ D A K L M GC PDIVTY L+
Sbjct: 363 VAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILI 422
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
HGL +D A ++ ++ + SP+ Y ++SG CK + A LF EM
Sbjct: 423 HGLVVSGHMDDAVNMKVKL-IDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNI 481
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
P+A+ + +LIDGF++ G+ D A ++ + G DVV ++I+G+CR G ++ L
Sbjct: 482 LPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALA 541
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ MN ++ T+S +I K + A + R +++ P Y +I+G+C
Sbjct: 542 CMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFC 601
Query: 442 KSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG-CSPDE 499
G+ A EM+ P+ T+T LI + + V +++++ T C P+E
Sbjct: 602 CQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNE 661
Query: 500 ITVRILSSCLLKSGMPGEAARI-KESLHENQGDS 532
+T +CLL+ + + ++ E N G S
Sbjct: 662 VTF----NCLLQGFVKKTSGKVLAEPDGSNHGQS 691
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/341 (28%), Positives = 171/341 (50%), Gaps = 4/341 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
+ + ++LLS+LVK +L DA ++ E+ ++ + +L+ G+C+ G V+ K +
Sbjct: 169 DVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLI 228
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
G GC P+IV YNT++ G C++ +++ A + KE+ LK F P + ++ T+I+G+CK
Sbjct: 229 EGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG-FMPTLETFGTMINGFCK 287
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG-NMDSALGIYKKMLFHGCPPDVV 361
+ L E+ G + + + N++ID + G +D A I ++ + C PDV
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESI-GWIIANDCKPDVA 346
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
T+ LI C+ GK + E + + + + +++ LI CKS A LL Q+
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEA-NAIVVEMEEKCKPDKFTFTILIAGHCMKGRA 480
P Y +I G SG++D+A N V ++ PD + +L++G C GR
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
A ++F +ML PD L ++SG EA ++
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKV 507
Score = 150 bits (379), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 193/402 (48%), Gaps = 17/402 (4%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+L+ LC++G A D G +P++ L+ ++ D++ +LL +
Sbjct: 347 TYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQM 406
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + V Y L+ LV +DDA+ + +L+ + + +N+LM GLC G
Sbjct: 407 AERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRF 466
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
A + M PD Y TL+ G R + D AR + + ++ +V +
Sbjct: 467 LPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVF-SLSVEKGVKVDVVHHNA 525
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+C+ + EA + + M+ P+ FT++++IDG+VK +M +A+ I++ M +
Sbjct: 526 MIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK-SNRLQEA 414
C P+VVT+TSLI G+C G + + EM R++ ++ T++ LI L K S+ L++A
Sbjct: 586 CKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKA 645
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCK--SGNV----DEAN----AIVVEMEEKCKPDK 464
+ VP +N ++ G+ K SG V D +N ++ E + K D
Sbjct: 646 VYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKSDG 705
Query: 465 FT-----FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
++ + + C+ G A + KM+ G SPD ++
Sbjct: 706 WSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVS 747
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 184/414 (44%), Gaps = 4/414 (0%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N LL L + A+ +YD M G D+ LV +++V ++L+
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWG 233
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
N V Y+ ++ K +++A +F+EL TF ++ G C GD
Sbjct: 234 KGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVA 293
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK-EVDRARDLLKEVGLKSKFSPNVRSYTTV 296
+ + L+ ++ G + N ++ R +VD A + + K P+V +Y +
Sbjct: 294 SDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCK--PDVATYNIL 351
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I+ CK K + A DE + G PN ++ LI + K D A + +M GC
Sbjct: 352 INRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGC 411
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
PD+VT+ LI G G ++ +++ ++ R +S +++L+S LCK+ R A+
Sbjct: 412 KPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKL 471
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCKPDKFTFTILIAGHC 475
L ++ +I+P +Y +IDG+ +SG+ DEA + + +E+ K D +I G C
Sbjct: 472 LFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFC 531
Query: 476 MKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
G +A+ +M PD+ T + +K A +I + +N+
Sbjct: 532 RSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNK 585
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 142/300 (47%), Gaps = 41/300 (13%)
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT--VISGYCKLSKMKEA 309
PD++ N+LL L + + + AR + E+ + +V +Y+T ++ G C K++
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGD---SVDNYSTCILVKGMCNEGKVEVG 224
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
L + G PN +N++I G+ K+G++++A ++K++ G P + TF ++I G
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMING 284
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLH--------------------------------- 396
+C+ G L E+ R + S+
Sbjct: 285 FCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPD 344
Query: 397 --TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
T+++LI+ LCK + + A L + + ++P Y +I YCKS D A+ +++
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+M E+ CKPD T+ ILI G + G DA+ + K++ G SPD +L S L K+G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 144/330 (43%), Gaps = 23/330 (6%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YNML+ LC+ G AKLL+ M LPD+ + L+ F D ++++ + +
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSV 512
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
V+V+ V ++ ++ + LD+A+ + H + T++ ++ G D+
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
A K M C P++VTY +L++G C + A + KE+ L+ PNV +YTT+
Sbjct: 573 TAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRD-LVPNVVTYTTL 631
Query: 297 ISGYCKLSKMKEASSLFDE-MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
I K S E + + E M + PN TFN L+ GFVK + K+L
Sbjct: 632 IRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS--------GKVL--- 680
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD G+ + + +H M + S ++ + LC ++ A
Sbjct: 681 AEPDGSNH----------GQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTAC 730
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGN 445
++ + P P + ++ G+C GN
Sbjct: 731 MFQDKMVKKGFSPDPVSFAAILHGFCVVGN 760
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+V + +++S K ++ +A ++DEM G + ++ L+ G G ++ +
Sbjct: 168 PDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVGRKL 227
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+ GC P++V + ++I GYC++G + ++ E+ + +L TF +I+ CK
Sbjct: 228 IEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCK 287
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG-NVDEANAIVVEMEEKCKPDKFT 466
+ LL ++K + N++ID + G VD A +I + CKPD T
Sbjct: 288 EGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVAT 347
Query: 467 FTILIAGHCMKGRAPDAI-----------------------------------VIFYKML 491
+ ILI C +G+ A+ + +M
Sbjct: 348 YNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMA 407
Query: 492 ATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
GC PD +T IL L+ SG +A +K L
Sbjct: 408 ERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKL 441
>AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15510901-15512691 FORWARD
LENGTH=596
Length = 596
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 109/359 (30%), Positives = 173/359 (48%), Gaps = 10/359 (2%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRS---HSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
V+ L+ K ++D+I +F E +RS HL+ T VL+ L D +K
Sbjct: 135 VFSWLMIYYAKAGMINDSIVVF-EQIRSCGLKPHLQACT--VLLNSLVKQRLTDTVWKIF 191
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
M G +I YN L+H + + ++A LL E+ K F P++ +Y T+IS YCK
Sbjct: 192 KKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEKGVF-PDIFTYNTLISVYCK 250
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
S EA S+ D M+RSG PN T+NS I GF + G M A ++++ + + VT
Sbjct: 251 KSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREATRLFRE-IKDDVTANHVT 309
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+T+LI+GYCR+ ++ L L M +R S + T++ ++ LC+ R++EA LL ++
Sbjct: 310 YTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRKLCEDGRIREANRLLTEMS 369
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAP 481
I P N +I+ YCK ++ A + +M E K D +++ LI G C
Sbjct: 370 GKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLDMYSYKALIHGFCKVLELE 429
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYEG 540
+A + M+ G SP T L E ++ E E +G + Y G
Sbjct: 430 NAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLEEF-EKRGLCADVALYRG 487
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/370 (25%), Positives = 179/370 (48%), Gaps = 3/370 (0%)
Query: 119 MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCN 178
+LL SL ++ L + ++ M G + + + LV + + + +++LL+E +
Sbjct: 173 VLLNSLVKQRLTDTVWKIFKKMVKLGVVANIHVYNVLVHACSKSGDPEKAEKLLSEMEEK 232
Query: 179 KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEA 238
V + Y+ L+SV K + +A+ + + RS T+N + G G + EA
Sbjct: 233 GVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRMREA 292
Query: 239 FKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS 298
+ ++ + + VTY TL+ G CR+ ++D A L +EV FSP V +Y +++
Sbjct: 293 TRLFREIKD-DVTANHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPGVVTYNSILR 350
Query: 299 GYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP 358
C+ +++EA+ L EM +P+ T N+LI+ + K+ +M SA+ + KKM+ G
Sbjct: 351 KLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKL 410
Query: 359 DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLL 418
D+ ++ +LI G+C+V ++ + M + S T+S L+ N+ E LL
Sbjct: 411 DMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLL 470
Query: 419 RQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMK 477
+ ++ + ++Y +I CK VD A + ME+K D FT + +
Sbjct: 471 EEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRT 530
Query: 478 GRAPDAIVIF 487
G+ +A +F
Sbjct: 531 GKVTEASALF 540
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 154/342 (45%), Gaps = 4/342 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ V +TYN L+ C+K +H A + D M G P+ + F+ R+
Sbjct: 230 EEKGVFPDIFTYNTLISVYCKKSMHFEALSVQDRMERSGVAPNIVTYNSFIHGFSREGRM 289
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE-TSTFNV 224
+ L E + + V N V Y L+ + N +D+A+ L RE+M S T+N
Sbjct: 290 REATRLFREIK-DDVTANHVTYTTLIDGYCRMNDIDEALRL-REVMESRGFSPGVVTYNS 347
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
++ LC G + EA + L M PD +T NTL++ C+I+++ A + K++ ++S
Sbjct: 348 ILRKLCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKM-IES 406
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
++ SY +I G+CK+ +++ A M G P T++ L+DGF D
Sbjct: 407 GLKLDMYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEI 466
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+ ++ G DV + LI C++ +V+Y L+ M + + F+ +
Sbjct: 467 TKLLEEFEKRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYA 526
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNV 446
++ ++ EA L + ++ +Y + Y +V
Sbjct: 527 YWRTGKVTEASALFDVMYNRRLMVNLKLYKSISASYAGDNDV 568
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 109/253 (43%), Gaps = 3/253 (1%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
+ F+ ++ + +H TY L+ C+ A L + M G P ++
Sbjct: 294 RLFREIKDDVTANHV--TYTTLIDGYCRMNDIDEALRLREVMESRGFSPGVVTYNSILRK 351
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
R+ + LL E K++ + + + L++ K + A+ + ++++ S L+
Sbjct: 352 LCEDGRIREANRLLTEMSGKKIEPDNITCNTLINAYCKIEDMVSAVKVKKKMIESGLKLD 411
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
++ L+ G C +++ A + L M G SP TY+ L+ G + D LL+
Sbjct: 412 MYSYKALIHGFCKVLELENAKEELFSMIEKGFSPGYATYSWLVDGFYNQNKQDEITKLLE 471
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
E K +V Y +I CKL ++ A LF+ M++ G ++ F ++ + +
Sbjct: 472 EFE-KRGLCADVALYRGLIRRICKLEQVDYAKVLFESMEKKGLVGDSVIFTTMAYAYWRT 530
Query: 339 GNMDSALGIYKKM 351
G + A ++ M
Sbjct: 531 GKVTEASALFDVM 543
>AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:29071983-29073536 REVERSE
LENGTH=517
Length = 517
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 156/317 (49%), Gaps = 2/317 (0%)
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
MR L TF ++M A VDEA N M + P++V +N LL LC+ K V
Sbjct: 160 MRKKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNV 219
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
+A+++ + ++ +F+P+ ++Y+ ++ G+ K + +A +F EM +G P+ T++
Sbjct: 220 RKAQEVFE--NMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSI 277
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
++D K G +D ALGI + M C P ++ L+ Y ++ +D + EM
Sbjct: 278 MVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSG 337
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
+ A + F+ LI CK+NR++ +L+++K + P N ++ + G DEA
Sbjct: 338 MKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAF 397
Query: 451 AIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
+ +M + C+PD T+T++I C K A ++ M G P T +L + L
Sbjct: 398 DVFRKMIKVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLC 457
Query: 511 KSGMPGEAARIKESLHE 527
+ +A + E + E
Sbjct: 458 EERTTQKACVLLEEMIE 474
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 179/389 (46%), Gaps = 40/389 (10%)
Query: 76 GKHLTPSLVLEVVKRLNNP-ILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAK 134
G ++ +V +V+ R N +L ++FFQ++ ++ + HS Y+M++ S + +
Sbjct: 95 GLRVSQEVVEDVLNRFRNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMW 154
Query: 135 LLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVL 194
L + MR K+ + ++ +A ++D + + + N V ++ LLS L
Sbjct: 155 DLINAMR-KKKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSAL 213
Query: 195 VKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDI 254
K + A +F E MR ++ T+++L+ G ++ +A + M GC PDI
Sbjct: 214 CKSKNVRKAQEVF-ENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDI 272
Query: 255 VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFD 314
VTY+ ++ LC+ VD A +++ + S P Y+ ++ Y ++++EA F
Sbjct: 273 VTYSIMVDILCKAGRVDEALGIVRSMD-PSICKPTTFIYSVLVHTYGTENRLEEAVDTFL 331
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNM--------------------------------- 341
EM+RSG K + FNSLI F K M
Sbjct: 332 EMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERG 391
Query: 342 --DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
D A +++KM+ C PD T+T +I+ +C ++ +W M + + S+HTFS
Sbjct: 392 EKDEAFDVFRKMI-KVCEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFS 450
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVP 428
VLI+ LC+ Q+A LL ++ I P
Sbjct: 451 VLINGLCEERTTQKACVLLEEMIEMGIRP 479
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 38/296 (12%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
EK ++ + +N LL +LC+ A+ +++ MR D PDS+ L+ + L
Sbjct: 195 EKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFENMR-DRFTPDSKTYSILLEGWGKEPNL 253
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVK----------------------------- 196
++E+ E + V Y ++ +L K
Sbjct: 254 PKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVL 313
Query: 197 ------HNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
N+L++A+ F E+ RS + + FN L+G C A + ++ L M+S G
Sbjct: 314 VHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGV 373
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
+P+ + N +L L E D A D+ ++ + P+ +YT VI +C+ +M+ A
Sbjct: 374 TPNSKSCNIILRHLIERGEKDEAFDVFRK--MIKVCEPDADTYTMVIKMFCEKKEMETAD 431
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
++ M + G P+ TF+ LI+G + A + ++M+ G P VTF L
Sbjct: 432 KVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRL 487
>AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:326136-327815 REVERSE
LENGTH=559
Length = 559
Score = 152 bits (384), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 193/444 (43%), Gaps = 48/444 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL---PDSRLLGFLVSSFALVDRLD-VSKEL 171
+YN L+ C+ G SA L+ + +R PD L + F+ + LD V +
Sbjct: 93 SYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYM 152
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+C N V Y + K +L A+ F + R TF L+ G C
Sbjct: 153 GVMLKC--CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCK 210
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
AGD++ A MR S ++VTY L+ G C+ E+ RA ++ + ++ + PN
Sbjct: 211 AGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRM-VEDRVEPNSL 269
Query: 292 SYTTVISGY-----------------------------------CKLSKMKEASSLFDEM 316
YTT+I G+ C K+KEA+ + ++M
Sbjct: 270 VYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDM 329
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
++S P+ F ++++ + K G M +A+ +Y K++ G PDVV +++I+G + G++
Sbjct: 330 EKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQL 389
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ + + ++ ++VLI LCK E L ++ +VP +Y
Sbjct: 390 HEAIVYFCIEKANDV-----MYTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMYTSW 444
Query: 437 IDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I G CK GN+ +A + M +E D +T LI G KG +A +F +ML +G
Sbjct: 445 IAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLNSGI 504
Query: 496 SPDEITVRILSSCLLKSGMPGEAA 519
SPD +L K G A+
Sbjct: 505 SPDSAVFDLLIRAYEKEGNMAAAS 528
Score = 145 bits (367), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/349 (27%), Positives = 173/349 (49%), Gaps = 11/349 (3%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL---ETSTFNVLMGGLCSAGDVDEAF 239
+ + Y++L+ ++ + A + L SH + + +FN L G +DE F
Sbjct: 90 DVISYNSLIDGHCRNGDIRSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVF 149
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
++ M CSP++VTY+T + C+ E+ A + + SPNV ++T +I G
Sbjct: 150 VYMGVMLKC-CSPNVVTYSTWIDTFCKSGELQLALKSFHSMK-RDALSPNVVTFTCLIDG 207
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
YCK ++ A SL+ EM R N T+ +LIDGF K G M A +Y +M+ P+
Sbjct: 208 YCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPN 267
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
+ +T++I+G+ + G + + +M + + + + V+IS LC + +L+EA +++
Sbjct: 268 SLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVE 327
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEA-NAIVVEMEEKCKPDKFTFTILIAGHCMKG 478
++++D+VP I+ +++ Y KSG + A N +E +PD + +I G G
Sbjct: 328 DMEKSDLVPDMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNG 387
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+ +AIV F A +++ +L L K G E R+ + E
Sbjct: 388 QLHEAIVYFCIEKA-----NDVMYTVLIDALCKEGDFIEVERLFSKISE 431
Score = 130 bits (327), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 161/333 (48%), Gaps = 41/333 (12%)
Query: 235 VDEAFKFLNGMR-----------------------------------SFGCSPDIVTYNT 259
V EA +FL+ +R S G +P ++N+
Sbjct: 2 VREALQFLSRLRKSSNLPDPFTCNKHIHQLINSNCGILSLKFLAYLVSRGYTPHRSSFNS 61
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
++ +C++ +V A D++ + + P+V SY ++I G+C+ ++ AS + + + S
Sbjct: 62 VVSFVCKLGQVKFAEDIVHSMP-RFGCEPDVISYNSLIDGHCRNGDIRSASLVLESLRAS 120
Query: 320 G---TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
KP+ +FNSL +GF K+ +D +Y ++ C P+VVT+++ I+ +C+ G++
Sbjct: 121 HGFICKPDIVSFNSLFNGFSKMKMLDEVF-VYMGVMLKCCSPNVVTYSTWIDTFCKSGEL 179
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
L +H M +S ++ TF+ LI CK+ L+ A L ++++R + Y +
Sbjct: 180 QLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTAL 239
Query: 437 IDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
IDG+CK G + A + M E++ +P+ +T +I G +G + +A+ KML G
Sbjct: 240 IDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIIDGFFQRGDSDNAMKFLAKMLNQGM 299
Query: 496 SPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
D ++ S L +G EA I E + ++
Sbjct: 300 RLDITAYGVIISGLCGNGKLKEATEIVEDMEKS 332
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 146/343 (42%), Gaps = 28/343 (8%)
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
+K + R LNV TY L+ C+KG A+ +Y M D P+S + ++
Sbjct: 221 YKEMRRVRMSLNV----VTYTALIDGFCKKGEMQRAEEMYSRMVEDRVEPNSLVYTTIID 276
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
F D + + LA+ ++++ Y ++S L + KL +A + ++ +S
Sbjct: 277 GFFQRGDSDNAMKFLAKMLNQGMRLDITAYGVIISGLCGNGKLKEATEIVEDMEKSDLVP 336
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE-------- 269
+ F +M +G + A + + G PD+V +T++ G+ + +
Sbjct: 337 DMVIFTTMMNAYFKSGRMKAAVNMYHKLIERGFEPDVVALSTMIDGIAKNGQLHEAIVYF 396
Query: 270 -VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+++A D++ YT +I CK E LF ++ +G P+ F +
Sbjct: 397 CIEKANDVM---------------YTVLIDALCKEGDFIEVERLFSKISEAGLVPDKFMY 441
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
S I G K GN+ A + +M+ G D++ +T+LI G G + ++ EM
Sbjct: 442 TSWIAGLCKQGNLVDAFKLKTRMVQEGLLLDLLAYTTLIYGLASKGLMVEARQVFDEMLN 501
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
IS F +LI K + A DLL ++R +V S
Sbjct: 502 SGISPDSAVFDLLIRAYEKEGNMAAASDLLLDMQRRGLVTAVS 544
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 27/225 (12%)
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G P+ +FNS++ K+G + A I M GC PDV+++ SLI+G+CR G +
Sbjct: 51 GYTPHRSSFNSVVSFVCKLGQVKFAEDIVHSMPRFGCEPDVISYNSLIDGHCRNGDI--- 107
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSN--RLQEARDLLRQLKRTDIV---------- 427
R+ S L + ++CK + + ++K D V
Sbjct: 108 ---------RSASLVLESLRASHGFICKPDIVSFNSLFNGFSKMKMLDEVFVYMGVMLKC 158
Query: 428 --PQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAI 484
P Y+ ID +CKSG + A M+ + P+ TFT LI G+C G A+
Sbjct: 159 CSPNVVTYSTWIDTFCKSGELQLALKSFHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAV 218
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
++ +M S + +T L K G A + + E++
Sbjct: 219 SLYKEMRRVRMSLNVVTYTALIDGFCKKGEMQRAEEMYSRMVEDR 263
>AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22768974-22771274 REVERSE
LENGTH=766
Length = 766
Score = 152 bits (383), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 213/427 (49%), Gaps = 19/427 (4%)
Query: 112 HSFWTYNMLLRSLCQKGLHSSA-KLLYDCMRFDGKLP-DSRLLGFLVSSFALVDRLDVSK 169
+S W + SLC+ ++A +L D M+ K P ++ L+S L +D+S+
Sbjct: 258 NSVW-LTRFISSLCKNARANAAWDILSDLMK--NKTPLEAPPFNALLS--CLGRNMDISR 312
Query: 170 --ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS------HLETST 221
+L+ + K++ + V L++ L K ++D+A+ +F ++ + ++
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKADSIH 372
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMR-SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
FN L+ GLC G + EA + L M+ C+P+ VTYN L+ G CR +++ A++++ +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+ + PNV + T++ G C+ + A F +M++ G K N T+ +LI V N
Sbjct: 433 K-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
++ A+ Y+KML GC PD + +LI G C+V + + + + ++ S L +++
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEK 459
LI C N ++ ++L +++ P YN +I + K + + ++ +M E+
Sbjct: 552 LIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM-LATGCSPDEITVRILSSCLLKSGMPGEA 518
P T+ +I +C G +A+ +F M L + +P+ + IL + K G G+A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 519 ARIKESL 525
+KE +
Sbjct: 672 LSLKEEM 678
Score = 142 bits (358), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 190/394 (48%), Gaps = 43/394 (10%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGK-LPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N L+ LC+ G A+ L M+ + + P++ L+ + +L+ +KE+++
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++++ N V + ++ + +H+ L+ A+ F ++ + T+ L+ CS +V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK---EVDRARDLLKEVGLKSKFSPNVRS 292
++A + M GCSPD Y L+ GLC+++ + R + LKE G FS ++ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG----FSLDLLA 548
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +I +C + ++ + +M++ G KP++ T+N+LI F K + +S + ++M
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P V T+ ++I+ YC VG+++ L L+ +M LH+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-------GLHS--------------- 646
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+ P IYN +I+ + K GN +A ++ EM+ K +P+ T+ L
Sbjct: 647 ------------KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
K + + + +M+ C P++IT+ IL
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEPNQITMEIL 728
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 107/431 (24%), Positives = 192/431 (44%), Gaps = 11/431 (2%)
Query: 118 NMLLRSLCQKGLHSSA-KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA--- 173
N+++ L + GL A K+L + ++ + P +R+ +V RL ++++A
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ V N+V +S L K+ + + A + +LM++ + LE FN L+ L
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS- 292
D+ + M PD+VT L++ LC+ + VD A ++ +++ K NV
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 293 ----YTTVISGYCKLSKMKEASSLFDEMD-RSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
+ T+I G CK+ ++KEA L M PNA T+N LIDG+ + G +++A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+M P+VVT +++ G CR +N + + +M + ++ T+ LI C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFT 466
+ +++A ++ P IY +I G C+ +A +V +++E D
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ +LI C K + M G PD IT L S K R+ E +
Sbjct: 549 YNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 527 ENQGDSLKKSY 537
E+ D +Y
Sbjct: 609 EDGLDPTVTTY 619
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/369 (28%), Positives = 165/369 (44%), Gaps = 59/369 (15%)
Query: 212 RSHSHLETSTF-NVLMGGLCSAGDVDEAFKFLNGM--RSFGCSPDIVTYNTLLHGLCRIK 268
R S+++ S NV++ L G VD+AFK L+ M + P+ +T + +LH
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH------ 230
Query: 269 EVDRARDLLKE--VGLKSKFS-----PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
EV + R L +E + L S+FS PN T IS CK ++ A + ++ ++ T
Sbjct: 231 EVWKGRLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKT 290
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
A FN+L+ + ++ + KM PDVVT LI C+ +V+ L+
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 382 LWHEMNTRN------ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD-IVPQPSIYN 434
++ +M + I A F+ LI LCK RL+EA +LL ++K + P YN
Sbjct: 351 VFEKMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYN 410
Query: 435 HVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHC------------------ 475
+IDGYC++G ++ A +V M E++ KP+ T ++ G C
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 476 -MKGRA----------------PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+KG A+ + KML GCSPD L S L + +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 519 ARIKESLHE 527
R+ E L E
Sbjct: 531 IRVVEKLKE 539
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 101 FQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA 160
F EK V + TY L+ + C A Y+ M G PD+++ L+S
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 161 LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS 220
V R + ++ + + ++ + Y+ L+ + N + + ++ + ++
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSI 582
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
T+N L+ D + + + MR G P + TY ++ C + E+D A L K++
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
GL SK +PN Y +I+ + KL +A SL +EM +PN T+N+L +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIE 368
++ L + +M+ C P+ +T L+E
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ + S + + + MR DG P G ++ ++ V LD + +L +
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 176 QC-NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+KV N V+Y+ L++ K A+ L E+ T+N L L
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS---KFSP 288
+ K ++ M C P+ +T L+ L E+ + R ++ + S K SP
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASP 759
>AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10332375-10334558 REVERSE
LENGTH=727
Length = 727
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 212/427 (49%), Gaps = 19/427 (4%)
Query: 112 HSFWTYNMLLRSLCQKGLHSSA-KLLYDCMRFDGKLP-DSRLLGFLVSSFALVDRLDVSK 169
+S W + SLC+ ++A +L D M+ K P ++ L+S L +D+S+
Sbjct: 258 NSVW-LTRFISSLCKNARANTAWDILSDLMK--NKTPLEAPPFNALLS--CLGRNMDISR 312
Query: 170 --ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS------HLETST 221
+L+ + K++ + V L++ L K ++D+A+ +F ++ + ++
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMR-SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
FN L+ GLC G + EA + L M+ C P+ VTYN L+ G CR +++ A++++ +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+ + PNV + T++ G C+ + A F +M++ G K N T+ +LI V N
Sbjct: 433 K-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
++ A+ Y+KML GC PD + +LI G C+V + + + + ++ S L +++
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEK 459
LI C N ++ ++L +++ P YN +I + K + + ++ +M E+
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM-LATGCSPDEITVRILSSCLLKSGMPGEA 518
P T+ +I +C G +A+ +F M L + +P+ + IL + K G G+A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 519 ARIKESL 525
+KE +
Sbjct: 672 LSLKEEM 678
Score = 139 bits (351), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 194/431 (45%), Gaps = 11/431 (2%)
Query: 118 NMLLRSLCQKGLHSSA-KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA--- 173
N+++ L + GL A K+L + ++ + P +R+ +V +RL ++++A
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ V N+V +S L K+ + + A + +LM++ + LE FN L+ L
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS- 292
D+ + M PD+VT L++ LC+ + VD A ++ +++ K NV
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 293 ----YTTVISGYCKLSKMKEASSLFDEMD-RSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
+ T+I G CK+ ++KEA L M PNA T+N LIDG+ + G +++A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+M P+VVT +++ G CR +N + + +M + ++ T+ LI C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFT 466
+ +++A ++ P IY +I G C+ +A +V +++E D
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ +LI C K A + M G PD IT L S K R+ E +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 527 ENQGDSLKKSY 537
E+ D +Y
Sbjct: 609 EDGLDPTVTTY 619
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 175/359 (48%), Gaps = 43/359 (11%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGK-LPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N L+ LC+ G A+ L M+ + + +P++ L+ + +L+ +KE+++
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++++ N V + ++ + +H+ L+ A+ F ++ + T+ L+ CS +V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK---EVDRARDLLKEVGLKSKFSPNVRS 292
++A + M GCSPD Y L+ GLC+++ + R + LKE G FS ++ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG----FSLDLLA 548
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +I +C + ++ + +M++ G KP++ T+N+LI F K + +S + ++M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P V T+ ++I+ YC VG+++ L L+ +M LH+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-------GLHS--------------- 646
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+ P IYN +I+ + K GN +A ++ EM+ K +P+ T+ L
Sbjct: 647 ------------KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 166/369 (44%), Gaps = 59/369 (15%)
Query: 212 RSHSHLETSTF-NVLMGGLCSAGDVDEAFKFLNGM--RSFGCSPDIVTYNTLLHGLCRIK 268
R S+++ S NV++ L G VD+AFK L+ M + P+ +T + +LH
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH------ 230
Query: 269 EVDRARDLLKE--VGLKSKFS-----PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
EV + R L +E + L S+FS PN T IS CK ++ A + ++ ++ T
Sbjct: 231 EVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
A FN+L+ + ++ + KM PDVVT LI C+ +V+ L+
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 382 LWHEMNTRN------ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD-IVPQPSIYN 434
++ +M + I A F+ LI LCK RL+EA +LL ++K + VP YN
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 435 HVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHC------------------ 475
+IDGYC++G ++ A +V M E++ KP+ T ++ G C
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 476 -MKGRA----------------PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+KG A+ + KML GCSPD L S L + +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 519 ARIKESLHE 527
R+ E L E
Sbjct: 531 IRVVEKLKE 539
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 43/290 (14%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS--------SFALVDRLDV 167
TYN L+ C+ G +AK + M+ D P+ + +V + A+V +D+
Sbjct: 408 TYNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDM 467
Query: 168 SKE----------LLAEAQCNKVQV-----------------NAVVYDNLLSVLVKHNKL 200
KE L A C+ V +A +Y L+S L + +
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRD 527
Query: 201 DDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTL 260
DAI + +L L+ +N+L+G C + ++ ++ L M G PD +TYNTL
Sbjct: 528 HDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTL 587
Query: 261 LHGLCRIKE---VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMD 317
+ + K+ V+R + ++E GL P V +Y VI YC + ++ EA LF +M
Sbjct: 588 ISFFGKHKDFESVERMMEQMREDGL----DPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 318 -RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
S PN +N LI+ F K+GN AL + ++M P+V T+ +L
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNAL 693
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 113/254 (44%)
Query: 101 FQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA 160
F EK V + TY L+ + C A Y+ M G PD+++ L+S
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 161 LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS 220
V R + ++ + + ++ + Y+ L+ + N + + ++ + ++
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
T+N L+ D + + + MR G P + TY ++ C + E+D A L K++
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
GL SK +PN Y +I+ + KL +A SL +EM +PN T+N+L +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 341 MDSALGIYKKMLFH 354
++ L + +M+ H
Sbjct: 703 GETLLKLMDEMVEH 716
>AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:10374927-10377227 FORWARD
LENGTH=766
Length = 766
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/427 (25%), Positives = 212/427 (49%), Gaps = 19/427 (4%)
Query: 112 HSFWTYNMLLRSLCQKGLHSSA-KLLYDCMRFDGKLP-DSRLLGFLVSSFALVDRLDVSK 169
+S W + SLC+ ++A +L D M+ K P ++ L+S L +D+S+
Sbjct: 258 NSVW-LTRFISSLCKNARANTAWDILSDLMK--NKTPLEAPPFNALLS--CLGRNMDISR 312
Query: 170 --ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS------HLETST 221
+L+ + K++ + V L++ L K ++D+A+ +F ++ + ++
Sbjct: 313 MNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKADSIH 372
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMR-SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
FN L+ GLC G + EA + L M+ C P+ VTYN L+ G CR +++ A++++ +
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+ + PNV + T++ G C+ + A F +M++ G K N T+ +LI V N
Sbjct: 433 K-EDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSN 491
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
++ A+ Y+KML GC PD + +LI G C+V + + + + ++ S L +++
Sbjct: 492 VEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLAYNM 551
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEK 459
LI C N ++ ++L +++ P YN +I + K + + ++ +M E+
Sbjct: 552 LIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMREDG 611
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM-LATGCSPDEITVRILSSCLLKSGMPGEA 518
P T+ +I +C G +A+ +F M L + +P+ + IL + K G G+A
Sbjct: 612 LDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVIYNILINAFSKLGNFGQA 671
Query: 519 ARIKESL 525
+KE +
Sbjct: 672 LSLKEEM 678
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 191/394 (48%), Gaps = 43/394 (10%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGK-LPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N L+ LC+ G A+ L M+ + + +P++ L+ + +L+ +KE+++
Sbjct: 373 FNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEVVSRM 432
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++++ N V + ++ + +H+ L+ A+ F ++ + T+ L+ CS +V
Sbjct: 433 KEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCSVSNV 492
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK---EVDRARDLLKEVGLKSKFSPNVRS 292
++A + M GCSPD Y L+ GLC+++ + R + LKE G FS ++ +
Sbjct: 493 EKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGG----FSLDLLA 548
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +I +C + ++ + +M++ G KP++ T+N+LI F K + +S + ++M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P V T+ ++I+ YC VG+++ L L+ +M LH+
Sbjct: 609 EDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM-------GLHS--------------- 646
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+ P IYN +I+ + K GN +A ++ EM+ K +P+ T+ L
Sbjct: 647 ------------KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALF 694
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
K + + + +M+ C P++IT+ IL
Sbjct: 695 KCLNEKTQGETLLKLMDEMVEQSCEPNQITMEIL 728
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/431 (25%), Positives = 194/431 (45%), Gaps = 11/431 (2%)
Query: 118 NMLLRSLCQKGLHSSA-KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA--- 173
N+++ L + GL A K+L + ++ + P +R+ +V +RL ++++A
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ V N+V +S L K+ + + A + +LM++ + LE FN L+ L
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS- 292
D+ + M PD+VT L++ LC+ + VD A ++ +++ K NV
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 293 ----YTTVISGYCKLSKMKEASSLFDEMD-RSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
+ T+I G CK+ ++KEA L M PNA T+N LIDG+ + G +++A +
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+M P+VVT +++ G CR +N + + +M + ++ T+ LI C
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFT 466
+ +++A ++ P IY +I G C+ +A +V +++E D
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLKEGGFSLDLLA 548
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ +LI C K A + M G PD IT L S K R+ E +
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 527 ENQGDSLKKSY 537
E+ D +Y
Sbjct: 609 EDGLDPTVTTY 619
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/369 (28%), Positives = 166/369 (44%), Gaps = 59/369 (15%)
Query: 212 RSHSHLETSTF-NVLMGGLCSAGDVDEAFKFLNGM--RSFGCSPDIVTYNTLLHGLCRIK 268
R S+++ S NV++ L G VD+AFK L+ M + P+ +T + +LH
Sbjct: 177 RLDSNMKNSQVRNVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLH------ 230
Query: 269 EVDRARDLLKE--VGLKSKFS-----PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
EV + R L +E + L S+FS PN T IS CK ++ A + ++ ++ T
Sbjct: 231 EVWKERLLTEEKIIALISRFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKT 290
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
A FN+L+ + ++ + KM PDVVT LI C+ +V+ L+
Sbjct: 291 PLEAPPFNALLSCLGRNMDISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALE 350
Query: 382 LWHEMNTRN------ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD-IVPQPSIYN 434
++ +M + I A F+ LI LCK RL+EA +LL ++K + VP YN
Sbjct: 351 VFEQMRGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYN 410
Query: 435 HVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHC------------------ 475
+IDGYC++G ++ A +V M E++ KP+ T ++ G C
Sbjct: 411 CLIDGYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKE 470
Query: 476 -MKGRA----------------PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+KG A+ + KML GCSPD L S L + +A
Sbjct: 471 GVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDA 530
Query: 519 ARIKESLHE 527
R+ E L E
Sbjct: 531 IRVVEKLKE 539
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 120/268 (44%)
Query: 101 FQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA 160
F EK V + TY L+ + C A Y+ M G PD+++ L+S
Sbjct: 463 FFMDMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLC 522
Query: 161 LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS 220
V R + ++ + + ++ + Y+ L+ + N + + ++ + ++
Sbjct: 523 QVRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSI 582
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
T+N L+ D + + + MR G P + TY ++ C + E+D A L K++
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
GL SK +PN Y +I+ + KL +A SL +EM +PN T+N+L +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIE 368
++ L + +M+ C P+ +T L+E
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILME 730
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 73/177 (41%), Gaps = 4/177 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ + S + + + MR DG P G ++ ++ V LD + +L +
Sbjct: 583 TYNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDM 642
Query: 176 QC-NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+KV N V+Y+ L++ K A+ L E+ T+N L L
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS---KFSP 288
+ K ++ M C P+ +T L+ L E+ + R ++ + S K SP
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQGYSVASPTEKASP 759
>AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28133933-28135381 FORWARD
LENGTH=453
Length = 453
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 150/291 (51%), Gaps = 3/291 (1%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
TF ++ SAG D+A K M GC D+ ++NT+L LC+ K V++A +L +
Sbjct: 128 TFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFR-- 185
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
L+ +FS + +Y +++G+C + + +A + EM G PN T+N+++ GF + G
Sbjct: 186 ALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQ 245
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ A + +M C DVVT+T+++ G+ G++ +++ EM + S+ T++
Sbjct: 246 IRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNA 305
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EK 459
+I LCK + ++ A + ++ R P + YN +I G +G ++ ME E
Sbjct: 306 MIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMENEG 365
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
C+P+ T+ ++I + A+ +F KM + C P+ T IL S +
Sbjct: 366 CEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGMF 416
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 203/423 (47%), Gaps = 19/423 (4%)
Query: 27 LARCFTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSL----DTRVLSYFGKHLTPS 82
+ R F+ + T A+ G+ KP ++ L L S + D +LS TP+
Sbjct: 1 MKRLFSKSLCTSAA---GANLKPPPADSAAIAKLILSSPNTTHQDDQFLLSTKTTPWTPN 57
Query: 83 LVLEVVKRL-NNPILGFKFFQFTREKLNVHHSFW-----TYNMLLRSLCQKGLHSSAKLL 136
LV V+KRL N+ +FF F L+ HH + ++++ + + LH + L
Sbjct: 58 LVNSVLKRLWNHGPKALQFFHF----LDNHHREYVHDASSFDLAIDIAARLHLHPTVWSL 113
Query: 137 YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
MR P + + +A + D + +L + + ++ +L VL K
Sbjct: 114 IHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCK 173
Query: 197 HNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVT 256
+++ A LFR L R ++T T+NV++ G C +A + L M G +P++ T
Sbjct: 174 SKRVEKAYELFRAL-RGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
YNT+L G R ++ A + E+ K +V +YTTV+ G+ ++K A ++FDEM
Sbjct: 233 YNTMLKGFFRAGQIRHAWEFFLEMK-KRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEM 291
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
R G P+ T+N++I K N+++A+ ++++M+ G P+V T+ LI G G+
Sbjct: 292 IREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEF 351
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ G +L M + T++++I Y + + +++A L ++ D +P YN +
Sbjct: 352 SRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNIL 411
Query: 437 IDG 439
I G
Sbjct: 412 ISG 414
Score = 89.0 bits (219), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 117/249 (46%), Gaps = 7/249 (2%)
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
+ P+ +++ V Y K +A LF M G + +FN+++D K ++ A
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+++ L D VT+ ++ G+C + + L++ EM R I+ +L T++ ++
Sbjct: 181 YELFRA-LRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPD 463
++ +++ A + ++K+ D Y V+ G+ +G + A + EM E P
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
T+ +I C K +A+V+F +M+ G P+ T +L L + GE +R +E
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHA---GEFSRGEE 356
Query: 524 SLH--ENQG 530
+ EN+G
Sbjct: 357 LMQRMENEG 365
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/132 (21%), Positives = 59/132 (44%)
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L H M + I S TF+++ + + +A L + + +N ++D C
Sbjct: 113 LIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLC 172
Query: 442 KSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
KS V++A + + + D T+ +++ G C+ R P A+ + +M+ G +P+ T
Sbjct: 173 KSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTT 232
Query: 502 VRILSSCLLKSG 513
+ ++G
Sbjct: 233 YNTMLKGFFRAG 244
>AT1G08610.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2733788-2735467 REVERSE
LENGTH=559
Length = 559
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 179/352 (50%), Gaps = 5/352 (1%)
Query: 189 NLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
NL+ L + ++LD A+C+ R ++ S +T T+N+++G LC G + A L M
Sbjct: 144 NLVRGLARIDQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLS 203
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G PD++TYNT++ + ++A K+ L++ P + +YT ++ C+
Sbjct: 204 GSPPDVITYNTVIRCMFDYGNAEQAIRFWKD-QLQNGCPPFMITYTVLVELVCRYCGSAR 262
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A + ++M G P+ T+NSL++ + GN++ + + +L HG + VT+ +L+
Sbjct: 263 AIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLH 322
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
C + ++ + M + ++ T+++LI+ LCK+ L A D Q+ +P
Sbjct: 323 SLCSHEYWDEVEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLP 382
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIF 487
YN V+ K G VD+A ++ ++ C P T+ +I G KG A+ ++
Sbjct: 383 DIVTYNTVLGAMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELY 442
Query: 488 YKMLATGCSPDEITVRILSSCLLKSGMPGEAARI-KESLHENQGDSLKKSYY 538
++ML G PD+IT R L ++ + EA ++ KE+ N+G+ ++ S Y
Sbjct: 443 HQMLDAGIFPDDITRRSLIYGFCRANLVEEAGQVLKET--SNRGNGIRGSTY 492
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/370 (25%), Positives = 175/370 (47%), Gaps = 2/370 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYNM++ +LC+KG +A +L + M G PD ++ + + +
Sbjct: 176 TYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNAEQAIRFWKDQ 235
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N + Y L+ ++ ++ AI + ++ + + T+N L+ C G++
Sbjct: 236 LQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVTYNSLVNYNCRRGNL 295
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+E + + S G + VTYNTLLH LC + D ++L + ++ + P V +Y
Sbjct: 296 EEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILN-IMYQTSYCPTVITYNI 354
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+G CK + A F +M P+ T+N+++ K G +D A+ + +
Sbjct: 355 LINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAIELLGLLKNTC 414
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
CPP ++T+ S+I+G + G + L+L+H+M I T LI C++N ++EA
Sbjct: 415 CPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGFCRANLVEEAG 474
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCKPDKFTFTILIAGH 474
+L++ + S Y VI G CK ++ A +V + + CKPD+ +T ++ G
Sbjct: 475 QVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDETIYTAIVKGV 534
Query: 475 CMKGRAPDAI 484
G +A+
Sbjct: 535 EEMGMGSEAV 544
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 146/305 (47%), Gaps = 2/305 (0%)
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ T N ++ LCS G + +A K + M P + + L+ GL RI ++D+A +L
Sbjct: 103 DEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCIL 162
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+ V + S P+ +Y +I CK ++ A L ++M SG+ P+ T+N++I
Sbjct: 163 R-VMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFD 221
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
GN + A+ +K L +GCPP ++T+T L+E CR +++ +M + T
Sbjct: 222 YGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCYPDIVT 281
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
++ L++Y C+ L+E +++ + + YN ++ C DE I+ M
Sbjct: 282 YNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMY 341
Query: 458 EKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPG 516
+ P T+ ILI G C AI FY+ML C PD +T + + K GM
Sbjct: 342 QTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVD 401
Query: 517 EAARI 521
+A +
Sbjct: 402 DAIEL 406
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/440 (22%), Positives = 198/440 (45%), Gaps = 37/440 (8%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T N +L +LC G + A L + M ++P LV A +D+LD + +L
Sbjct: 106 TNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMCILRVM 165
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + + Y+ ++ L K + A+ L ++ S S + T+N ++ + G+
Sbjct: 166 VMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITYNTVIRCMFDYGNA 225
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++A +F GC P ++TY L+ +CR RA ++L+++ ++ + P++ +Y +
Sbjct: 226 EQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAVEGCY-PDIVTYNS 284
Query: 296 VISGYCKLSKMKEASSL----------------------------FDEMD-------RSG 320
+++ C+ ++E +S+ +DE++ ++
Sbjct: 285 LVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDEVEEILNIMYQTS 344
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
P T+N LI+G K + A+ + +ML C PD+VT+ +++ + G V+ +
Sbjct: 345 YCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLGAMSKEGMVDDAI 404
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+L + L T++ +I L K +++A +L Q+ I P +I G+
Sbjct: 405 ELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFPDDITRRSLIYGF 464
Query: 441 CKSGNVDEANAIVVEMEEKCKPDK-FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
C++ V+EA ++ E + + T+ ++I G C K AI + ML GC PDE
Sbjct: 465 CRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVVEIMLTGGCKPDE 524
Query: 500 ITVRILSSCLLKSGMPGEAA 519
+ + + GM EA
Sbjct: 525 TIYTAIVKGVEEMGMGSEAV 544
>AT5G18390.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6090954-6092333 FORWARD
LENGTH=459
Length = 459
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 162/339 (47%), Gaps = 3/339 (0%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM- 245
Y+ L L H K + + +++ + T ++ G VD+A + NG+
Sbjct: 114 YEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAVELFNGVP 173
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
++ GC + YN+LLH LC +K A L++ + ++ P+ R+Y +++G+C K
Sbjct: 174 KTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRM-IRKGLKPDKRTYAILVNGWCSAGK 232
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
MKEA DEM R G P A + LI+G + G ++SA + KM G PD+ TF
Sbjct: 233 MKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPDIQTFNI 292
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
LIE + G+V + +++++ + + T+ LI + K ++ EA LL
Sbjct: 293 LIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLNNCVEDG 352
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAI 484
P PS+Y +I G C++G D+A + +M+ K P++ +T+LI G+ DA
Sbjct: 353 HKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRGGKFVDAA 412
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
+M G P +++ L G A RI++
Sbjct: 413 NYLVEMTEMGLVPISRCFDMVTDGLKNGGKHDLAMRIEQ 451
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/277 (23%), Positives = 108/277 (38%), Gaps = 1/277 (0%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
+ F + L + YN LL +LC + A L M G PD R LV+
Sbjct: 167 ELFNGVPKTLGCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAILVNG 226
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
+ ++ ++E L E A D L+ L+ L+ A + ++ + +
Sbjct: 227 WCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGFVPD 286
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
TFN+L+ + +G+V+ + G DI TY TL+ + +I ++D A LL
Sbjct: 287 IQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFRLLN 346
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
++ P Y +I G C+ +A S F +M PN + LI +
Sbjct: 347 NC-VEDGHKPFPSLYAPIIKGMCRNGMFDDAFSFFSDMKVKAHPPNRPVYTMLITMCGRG 405
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
G A +M G P F + +G GK
Sbjct: 406 GKFVDAANYLVEMTEMGLVPISRCFDMVTDGLKNGGK 442
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
++P Y + K + + +M + T +I+ + K G++D A+
Sbjct: 107 YTPTSMEYEELAKSLASHKKYESMWKILKQMKDLSLDISGETLCFIIEQYGKNGHVDQAV 166
Query: 346 ----GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
G+ K + GC V + SL+ C V + L M + + T+++L
Sbjct: 167 ELFNGVPKTL---GCQQTVDVYNSLLHALCDVKMFHGAYALIRRMIRKGLKPDKRTYAIL 223
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC- 460
++ C + +++EA++ L ++ R P + +I+G +G ++ A +V +M +
Sbjct: 224 VNGWCSAGKMKEAQEFLDEMSRRGFNPPARGRDLLIEGLLNAGYLESAKEMVSKMTKGGF 283
Query: 461 KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAAR 520
PD TF ILI G I ++Y G D T + L + K G EA R
Sbjct: 284 VPDIQTFNILIEAISKSGEVEFCIEMYYTACKLGLCVDIDTYKTLIPAVSKIGKIDEAFR 343
Query: 521 I 521
+
Sbjct: 344 L 344
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 116/445 (26%), Positives = 197/445 (44%), Gaps = 53/445 (11%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y L+ C +G S A L M GK PD + L A + E L +
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
V+ V ++ ++ L+ +LD A + L + S ++ G C+AG +D
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDAS----MVKGFCAAGCLD 549
Query: 237 EAFK---------------------------------FLNGMRSFGCSPDIVTYNTLLHG 263
AF+ L+ M G P+ Y L+
Sbjct: 550 HAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGA 609
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
CR+ V +AR+ E+ + K P++ +YT +I+ YC+L++ K+A +LF++M R KP
Sbjct: 610 WCRVNNVRKAREFF-EILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKP 668
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T++ L+ N D L + ++M PDVV +T +I YC + + L+
Sbjct: 669 DVVTYSVLL-------NSDPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYALF 721
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+M R I + T++VL+ + + R+L R++K D+ P Y +ID CK
Sbjct: 722 KDMKRREIVPDVVTYTVLL-------KNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKI 774
Query: 444 GNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
G++ EA I +M E PD +T LIA C G +A +IF +M+ +G PD +
Sbjct: 775 GDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPY 834
Query: 503 RILSSCLLKSGMPGEAARIKESLHE 527
L + ++G +A ++ + + E
Sbjct: 835 TALIAGCCRNGFVLKAVKLVKEMLE 859
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 108/466 (23%), Positives = 190/466 (40%), Gaps = 64/466 (13%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
+L+ CQ G S A L+ R D + + +++ + EL E
Sbjct: 367 ILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG 426
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
+ + + Y L+ K DA L E+ + + +NVL GGL + G EAF
Sbjct: 427 IAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAF 486
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-------------- 285
+ L M + G P VT+N ++ GL E+D+A + + KS+
Sbjct: 487 ETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAG 546
Query: 286 -----FSPNVR--------SYTTVISGYC-KLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
F +R Y T+ + C + + +A L D M + G +P + L
Sbjct: 547 CLDHAFERFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKL 606
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
I + +V N+ A ++ ++ PD+ T+T +I YCR+ + L+ +M R++
Sbjct: 607 IGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDV 666
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
+ T+SVL++ D+ R+++ D++P Y +I+ YC ++ + A
Sbjct: 667 KPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVYA 719
Query: 452 IVVEMEEK-----------------------------CKPDKFTFTILIAGHCMKGRAPD 482
+ +M+ + KPD F +T+LI C G +
Sbjct: 720 LFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLGE 779
Query: 483 AIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
A IF +M+ +G PD L +C K G EA I + + E+
Sbjct: 780 AKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIES 825
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/423 (23%), Positives = 179/423 (42%), Gaps = 35/423 (8%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF----LVSSFALVDRLDVSKELL 172
Y + LC + A L +R L D LG +V R++ ++ ++
Sbjct: 255 YLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDAESVV 314
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ + + + + VY ++ K+ + A+ +F ++++ + + ++ C
Sbjct: 315 LDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQM 374
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G+ EA+ R S D V YN L ++ +V+ A +L +E+ K +P+V +
Sbjct: 375 GNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKG-IAPDVIN 433
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
YTT+I G C K +A L EMD +G P+ +N L G G A K M
Sbjct: 434 YTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMME 493
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH--EMNTRNISASL-----------HTFS 399
G P VT +IEG G+++ + E +R AS+ H F
Sbjct: 494 NRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFE 553
Query: 400 ---------------VLISYLC-KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
L + LC + + + +A+DLL ++ + + P+ S+Y +I +C+
Sbjct: 554 RFIRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRV 613
Query: 444 GNVDEANAIV-VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
NV +A + + +K PD FT+TI+I +C A +F M PD +T
Sbjct: 614 NNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTY 673
Query: 503 RIL 505
+L
Sbjct: 674 SVL 676
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 149/314 (47%), Gaps = 8/314 (2%)
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV---- 224
++LL+ ++ + V Y N + L + D A L + L ++ ++ S +
Sbjct: 237 EKLLSRLLISETRNPCVFYLNFIEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRK 296
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
++ GLC +++A + M G PD+ Y+ ++ G + + +A D+ ++ LK
Sbjct: 297 VVRGLCYEMRIEDAESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKM-LKK 355
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
+ N ++++ YC++ EA LF E + + +N D K+G ++ A
Sbjct: 356 RKRINCVIVSSILQCYCQMGNFSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEA 415
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+ ++++M G PDV+ +T+LI G C GK + DL EM+ + + ++VL
Sbjct: 416 IELFREMTGKGIAPDVINYTTLIGGCCLQGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGG 475
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDK 464
L + QEA + L+ ++ + P +N VI+G +G +D+A A +E K + +
Sbjct: 476 LATNGLAQEAFETLKMMENRGVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSREND 535
Query: 465 FTFTILIAGHCMKG 478
+ ++ G C G
Sbjct: 536 AS---MVKGFCAAG 546
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 146/334 (43%), Gaps = 37/334 (11%)
Query: 96 LGFKFFQFTREKLNVHHSFWTYNMLLRSLC-QKGLHSSAKLLYDCMRFDGKLPDSRLLGF 154
L F +F R + + S Y L SLC +K S A+ L D M G P+ + G
Sbjct: 548 LDHAFERFIRLEFPLPKS--VYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGK 605
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+ ++ V+ + ++E K+ + Y +++ + N+ A LF ++ R
Sbjct: 606 LIGAWCRVNNVRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRD 665
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ T++VL+ D M +F PD+V Y +++ C + ++ +
Sbjct: 666 VKPDVVTYSVLLNS-------DPELDMKREMEAFDVIPDVVYYTIMINRYCHLNDLKKVY 718
Query: 275 DLLKE--------------VGLKSK-------------FSPNVRSYTTVISGYCKLSKMK 307
L K+ V LK+K P+V YT +I CK+ +
Sbjct: 719 ALFKDMKRREIVPDVVTYTVLLKNKPERNLSREMKAFDVKPDVFYYTVLIDWQCKIGDLG 778
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
EA +FD+M SG P+A + +LI K+G + A I+ +M+ G PDVV +T+LI
Sbjct: 779 EAKRIFDQMIESGVDPDAAPYTALIACCCKMGYLKEAKMIFDRMIESGVKPDVVPYTALI 838
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
G CR G V + L EM + I + + S +
Sbjct: 839 AGCCRNGFVLKAVKLVKEMLEKGIKPTKASLSAV 872
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/321 (22%), Positives = 124/321 (38%), Gaps = 32/321 (9%)
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCR--------------IKEVDRAR-----DLLK 278
A FL + P + Y T++ +C ++ D R DLLK
Sbjct: 74 ALSFLKRIEGNVTLPSVQAYATVIRIVCGWGLDKKLDTFLFELVRRGDEGRGFSVMDLLK 133
Query: 279 EVG-LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS-GTKPNAFTFNSLIDGFV 336
+G ++ +R T ++ Y L EA +F S G P+ N LI +
Sbjct: 134 AIGEMEQSLVLLIRVSTALVKAYANLDMFDEAIDIFFRAYYSLGRAPDIKALNFLISRMI 193
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM---NTRNISA 393
G D +G + ++ G D T+ +++ R L + TRN
Sbjct: 194 ASGRSDMVVGFFWEIERLGLDADAHTYVLVVQALWRNDDKEELEKLLSRLLISETRNPCV 253
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS----IYNHVIDGYCKSGNVDEA 449
F I LC + A LL+ L+ +I+ S Y V+ G C +++A
Sbjct: 254 FYLNF---IEGLCLNQMTDIAYFLLQPLRDANILVDKSDLGIAYRKVVRGLCYEMRIEDA 310
Query: 450 NAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
++V++ME+ PD + ++ +I GH P A+ +F KML + + V + C
Sbjct: 311 ESVVLDMEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQC 370
Query: 509 LLKSGMPGEAARIKESLHENQ 529
+ G EA + + E
Sbjct: 371 YCQMGNFSEAYDLFKEFRETN 391
>AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23451144-23452201 FORWARD
LENGTH=323
Length = 323
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 158/315 (50%), Gaps = 6/315 (1%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
TF LM GLC G V +A ++ M G P Y T+++GLC++ + + A +LL ++
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKM 67
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
++ +V Y +I CK A +LF EM G P+ T++ +ID F + G
Sbjct: 68 E-ETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGR 126
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
A + + M+ PDVVTF++LI + GKV+ +++ +M R I + T++
Sbjct: 127 WTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNS 186
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK- 459
+I CK +RL +A+ +L + P ++ +I+GYCK+ VD I EM +
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
+ T+T LI G C G A + M+++G +P+ IT + + + L +A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 520 RIKESLHENQGDSLK 534
I E L +++G L+
Sbjct: 307 AILEDLQKSEGHHLE 321
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 84/262 (32%), Positives = 139/262 (53%), Gaps = 6/262 (2%)
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M GC PD+VT+ TL++GLC V +A L+ + ++ P Y T+I+G CK+
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM-VEEGHQP----YGTIINGLCKMG 55
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ A +L +M+ + K + +N++ID K G+ A ++ +M G PDV+T++
Sbjct: 56 DTESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYS 115
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+I+ +CR G+ L +M R I+ + TFS LI+ L K ++ EA ++ + R
Sbjct: 116 GMIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRR 175
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDA 483
I P YN +IDG+CK +++A ++ M K C PD TF+ LI G+C R +
Sbjct: 176 GIFPTTITYNSMIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNG 235
Query: 484 IVIFYKMLATGCSPDEITVRIL 505
+ IF +M G + +T L
Sbjct: 236 MEIFCEMHRRGIVANTVTYTTL 257
Score = 147 bits (370), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 154/306 (50%), Gaps = 15/306 (4%)
Query: 153 GFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR 212
G ++ + ALVDR+ V+ Y +++ L K + A+ L ++
Sbjct: 24 GRVLQALALVDRM--------------VEEGHQPYGTIINGLCKMGDTESALNLLSKMEE 69
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDR 272
+H +N ++ LC G A M G PD++TY+ ++ CR
Sbjct: 70 THIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRWTD 129
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
A LL+++ ++ + +P+V +++ +I+ K K+ EA ++ +M R G P T+NS+I
Sbjct: 130 AEQLLRDM-IERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRGIFPTTITYNSMI 188
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
DGF K ++ A + M C PDVVTF++LI GYC+ +V+ G++++ EM+ R I
Sbjct: 189 DGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 248
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
A+ T++ LI C+ L A+DLL + + + P + ++ C + +A AI
Sbjct: 249 ANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAFAI 308
Query: 453 VVEMEE 458
+ ++++
Sbjct: 309 LEDLQK 314
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 159/310 (51%), Gaps = 5/310 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ L+ LC +G A L D M +G P G +++ + + + LL++
Sbjct: 12 TFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGDTESALNLLSKM 67
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ + V+Y+ ++ L K A LF E+ + T++ ++ C +G
Sbjct: 68 EETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSGMIDSFCRSGRW 127
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+A + L M +PD+VT++ L++ L + +V A ++ ++ L+ P +Y +
Sbjct: 128 TDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDM-LRRGIFPTTITYNS 186
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G+CK ++ +A + D M P+ TF++LI+G+ K +D+ + I+ +M G
Sbjct: 187 MIDGFCKQDRLNDAKRMLDSMASKSCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 246
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
+ VT+T+LI G+C+VG ++ DL + M + ++ + TF +++ LC L++A
Sbjct: 247 IVANTVTYTTLIHGFCQVGDLDAAQDLLNVMISSGVAPNYITFQSMLASLCSKKELRKAF 306
Query: 416 DLLRQLKRTD 425
+L L++++
Sbjct: 307 AILEDLQKSE 316
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 103/211 (48%), Gaps = 5/211 (2%)
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
M +G +P+ TF +L++G G + AL + +M+ G P + ++I G C++G
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRMVEEGHQP----YGTIINGLCKMGD 56
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
L+L +M +I A + ++ +I LCK A++L ++ I P Y+
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 436 VIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+ID +C+SG +A ++ +M E + PD TF+ LI +G+ +A I+ ML G
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEIYGDMLRRG 176
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESL 525
P IT + K +A R+ +S+
Sbjct: 177 IFPTTITYNSMIDGFCKQDRLNDAKRMLDSM 207
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 92/192 (47%), Gaps = 12/192 (6%)
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
M+ GC PDVVTFT+L+ G C G+V L L M + + +I+ LCK
Sbjct: 1 MVETGCRPDVVTFTTLMNGLCCEGRVLQALALVDRM----VEEGHQPYGTIINGLCKMGD 56
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTI 469
+ A +LL +++ T I IYN +ID CK G+ A + EM +K PD T++
Sbjct: 57 TESALNLLSKMEETHIKAHVVIYNAIIDRLCKDGHHIHAQNLFTEMHDKGIFPDVITYSG 116
Query: 470 LIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+I C GR DA + M+ +PD +T L + L+K G EA I
Sbjct: 117 MIDSFCRSGRWTDAEQLLRDMIERQINPDVVTFSALINALVKEGKVSEAEEI-------Y 169
Query: 530 GDSLKKSYYEGT 541
GD L++ + T
Sbjct: 170 GDMLRRGIFPTT 181
>AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675811 FORWARD
LENGTH=463
Length = 463
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 145/273 (53%), Gaps = 2/273 (0%)
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
N ++ + V D + L + ++D+A L +EL HS +T T+N L+ LC D+
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 238 AFKFLNGMRS-FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
++F++ MR F PD+V++ L+ +C K + A L+ ++G + F P+ Y T+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG-NAGFKPDCFLYNTI 271
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
+ G+C LSK EA ++ +M G +P+ T+N+LI G K G ++ A K M+ G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
PD T+TSL+ G CR G+ L L EM R + + T++ L+ LCK+ + + +
Sbjct: 332 EPDTATYTSLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLCKARLMDKGME 391
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
L +K + + + + Y ++ KSG V EA
Sbjct: 392 LYEMMKSSGVKLESNGYATLVRSLVKSGKVAEA 424
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 160/329 (48%), Gaps = 9/329 (2%)
Query: 200 LDDAICLFRELMRSHSHLET--STFNVLMGGLCSAGD--VDEAFKFLNGMRSFGCSPDIV 255
++D + LF+ +++S + STF +L+ C A D + + LN M + G PD V
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
T + + LC VD A+DL+KE+ K P+ +Y ++ CK + DE
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 316 M-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
M D KP+ +F LID N+ A+ + K+ G PD + ++++G+C +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
K + + ++ +M + T++ LI L K+ R++EAR L+ + P + Y
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKML-A 492
+++G C+ G A +++ EME + C P+ T+ L+ G C K R D + Y+M+ +
Sbjct: 340 SLMNGMCRKGESLGALSLLEEMEARGCAPNDCTYNTLLHGLC-KARLMDKGMELYEMMKS 398
Query: 493 TGCSPDEITVRILSSCLLKSGMPGEAARI 521
+G + L L+KSG EA +
Sbjct: 399 SGVKLESNGYATLVRSLVKSGKVAEAYEV 427
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 119/237 (50%), Gaps = 6/237 (2%)
Query: 115 WTYNMLLRSLCQ-KGLHSSAKLLYDCMR--FDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
+TYN LL+ LC+ K LH + + D MR FD K PD L+ + L + L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFV-DEMRDDFDVK-PDLVSFTILIDNVCNSKNLREAMYL 252
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+++ + + +Y+ ++ +K +A+ +++++ + T+N L+ GL
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
AG V+EA +L M G PD TY +L++G+CR E A LL+E+ + +PN
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEARG-CAPNDC 371
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
+Y T++ G CK M + L++ M SG K + + +L+ VK G + A ++
Sbjct: 372 TYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESNGYATLVRSLVKSGKVAEAYEVF 428
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 125/267 (46%), Gaps = 16/267 (5%)
Query: 68 DTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQK 127
DT ++ KHL L VV ++F R+ +V ++ +L+ ++C
Sbjct: 193 DTYTYNFLLKHLCKCKDLHVV---------YEFVDEMRDDFDVKPDLVSFTILIDNVCNS 243
Query: 128 GLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVY 187
A L + G PD L ++ F + + + + + + V+ + + Y
Sbjct: 244 KNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITY 303
Query: 188 DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRS 247
+ L+ L K ++++A + ++ + +T+T+ LM G+C G+ A L M +
Sbjct: 304 NTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCRKGESLGALSLLEEMEA 363
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLS 304
GC+P+ TYNTLLHGLC+ + +D+ +L +K G+K + + Y T++ K
Sbjct: 364 RGCAPNDCTYNTLLHGLCKARLMDKGMELYEMMKSSGVKLESN----GYATLVRSLVKSG 419
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSL 331
K+ EA +FD S + +A +++L
Sbjct: 420 KVAEAYEVFDYAVDSKSLSDASAYSTL 446
>AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 173/358 (48%), Gaps = 5/358 (1%)
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G+ ++ +L + + D ELL + ++ + V + + L K L +A
Sbjct: 266 GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEA 325
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ +L ++ + + ++ G C G +EA K ++ SF P+I Y++ L
Sbjct: 326 TSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSN 382
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
+C ++ RA + +E+ + P+ YTT+I GYC L + +A F + +SG P
Sbjct: 383 ICSTGDMLRASTIFQEI-FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T LI + G++ A +++ M G DVVT+ +L+ GY + ++N +L
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
EM + IS + T+++LI + + EA +++ +L R VP + VI G+ K
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 444 GNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
G+ EA + M + + KPD T + L+ G+C R AIV+F K+L G PD +
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 7/303 (2%)
Query: 106 EKLNVHHSF------WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
E + + HSF + Y+ L ++C G A ++ + G LPD ++ +
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
+ R D + + + + L+ + + DA +FR + L+
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
T+N LM G +++ F+ ++ MRS G SPD+ TYN L+H + +D A +++ E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ ++ F P+ ++T VI G+ K +EA L+ M KP+ T ++L+ G+ K
Sbjct: 539 L-IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
M+ A+ ++ K+L G PDVV + +LI GYC VG + +L M R + + T
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 400 VLI 402
L+
Sbjct: 658 ALV 660
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 165/362 (45%), Gaps = 11/362 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+ + + LC+ G A + ++ G DS + ++ F V + + + +L+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI--- 364
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+++ N VY + LS + + A +F+E+ + + ++ G C+ G
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRS 292
D+AF++ + G P + T L+ R + A + +K GLK +V +
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK----LDVVT 480
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y ++ GY K ++ + L DEM +G P+ T+N LI V G +D A I +++
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P + FT +I G+ + G LW M + + T S L+ CK+ R++
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILI 471
+A L +L + P +YN +I GYC G++++A ++ M ++ P++ T L+
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 472 AG 473
G
Sbjct: 661 LG 662
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 8/325 (2%)
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICL-FRELM--RSHSHLETSTFNVLMGGLCSAGDVDE 237
+N D LL ++ K + + ++CL ++L R + + F++L+ V+
Sbjct: 160 NMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNM 219
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A K + FG P +LL + R+ ++ AR+ ++ + L N + I
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM-LSRGRHLNAAVLSLFI 278
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
YC + L M G +P+ F ID K G + A + K+ G
Sbjct: 279 RKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
D V+ +S+I+G+C+VGK + L H R ++ +S +S +C + + A +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTI 395
Query: 418 LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMK 477
+++ ++P Y +IDGYC G D+A + + P T + ++ G C +
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 478 -GRAPDAIVIFYKMLATGCSPDEIT 501
G DA +F M G D +T
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVT 480
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S T +L+ + + G S A+ ++ M+ +G D L+ + +L+ EL+
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E + + + Y+ L+ +V +D+A + EL+R T F ++GG
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
GD EAF M PD+VT + LLHG C+ + +++A L ++ L + P+V
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL-LDAGLKPDVVL 620
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
Y T+I GYC + +++A L M + G PN T ++L+ G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
++ ++ A + M G NA + I + G D + M +G PD+V
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
FT I+ C+ G + + ++ IS + S +I CK + +EA L+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRA 480
+ + P +Y+ + C +G++ A+ I E+ E PD +T +I G+C GR
Sbjct: 368 R---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
A F +L +G P T IL + G +A +
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
F+ LI+ R KVN L L ++++ I S L+ + + + L+ AR+ + +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRA 480
++ + I YC G D+ +++ M+ +PD FT+ I C G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+A + +K+ G S D ++V + K G P EA ++ S
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
>AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:8362672-8364753 FORWARD
LENGTH=693
Length = 693
Score = 149 bits (375), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 173/358 (48%), Gaps = 5/358 (1%)
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G+ ++ +L + + D ELL + ++ + V + + L K L +A
Sbjct: 266 GRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEA 325
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ +L ++ + + ++ G C G +EA K ++ SF P+I Y++ L
Sbjct: 326 TSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIH---SFRLRPNIFVYSSFLSN 382
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
+C ++ RA + +E+ + P+ YTT+I GYC L + +A F + +SG P
Sbjct: 383 ICSTGDMLRASTIFQEI-FELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPP 441
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T LI + G++ A +++ M G DVVT+ +L+ GY + ++N +L
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
EM + IS + T+++LI + + EA +++ +L R VP + VI G+ K
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 444 GNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
G+ EA + M + + KPD T + L+ G+C R AIV+F K+L G PD +
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDAGLKPDVV 619
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 143/303 (47%), Gaps = 7/303 (2%)
Query: 106 EKLNVHHSF------WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
E + + HSF + Y+ L ++C G A ++ + G LPD ++ +
Sbjct: 359 EAIKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGY 418
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
+ R D + + + + L+ + + DA +FR + L+
Sbjct: 419 CNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDV 478
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
T+N LM G +++ F+ ++ MRS G SPD+ TYN L+H + +D A +++ E
Sbjct: 479 VTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISE 538
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ ++ F P+ ++T VI G+ K +EA L+ M KP+ T ++L+ G+ K
Sbjct: 539 L-IRRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQ 597
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
M+ A+ ++ K+L G PDVV + +LI GYC VG + +L M R + + T
Sbjct: 598 RMEKAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHH 657
Query: 400 VLI 402
L+
Sbjct: 658 ALV 660
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 165/362 (45%), Gaps = 11/362 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+ + + LC+ G A + ++ G DS + ++ F V + + + +L+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLI--- 364
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+++ N VY + LS + + A +F+E+ + + ++ G C+ G
Sbjct: 365 HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRS 292
D+AF++ + G P + T L+ R + A + +K GLK +V +
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLK----LDVVT 480
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y ++ GY K ++ + L DEM +G P+ T+N LI V G +D A I +++
Sbjct: 481 YNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELI 540
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P + FT +I G+ + G LW M + + T S L+ CK+ R++
Sbjct: 541 RRGFVPSTLAFTDVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRME 600
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILI 471
+A L +L + P +YN +I GYC G++++A ++ M ++ P++ T L+
Sbjct: 601 KAIVLFNKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALV 660
Query: 472 AG 473
G
Sbjct: 661 LG 662
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 139/325 (42%), Gaps = 8/325 (2%)
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICL-FRELM--RSHSHLETSTFNVLMGGLCSAGDVDE 237
+N D LL ++ K + + ++CL ++L R + + F++L+ V+
Sbjct: 160 NMNYRAVDMLLCLVKKCSGEERSLCLVMKDLFETRIDRRVLETVFSILIDCCIRERKVNM 219
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A K + FG P +LL + R+ ++ AR+ ++ + L N + I
Sbjct: 220 ALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM-LSRGRHLNAAVLSLFI 278
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
YC + L M G +P+ F ID K G + A + K+ G
Sbjct: 279 RKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGIS 338
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
D V+ +S+I+G+C+VGK + L H R ++ +S +S +C + + A +
Sbjct: 339 QDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTI 395
Query: 418 LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMK 477
+++ ++P Y +IDGYC G D+A + + P T + ++ G C +
Sbjct: 396 FQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSR 455
Query: 478 -GRAPDAIVIFYKMLATGCSPDEIT 501
G DA +F M G D +T
Sbjct: 456 FGSISDAESVFRNMKTEGLKLDVVT 480
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S T +L+ + + G S A+ ++ M+ +G D L+ + +L+ EL+
Sbjct: 442 SLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELI 501
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E + + + Y+ L+ +V +D+A + EL+R T F ++GG
Sbjct: 502 DEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFTDVIGGFSKR 561
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
GD EAF M PD+VT + LLHG C+ + +++A L ++ L + P+V
Sbjct: 562 GDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKL-LDAGLKPDVVL 620
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
Y T+I GYC + +++A L M + G PN T ++L+ G
Sbjct: 621 YNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLG 662
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 4/221 (1%)
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
++ ++ A + M G NA + I + G D + M +G PD+V
Sbjct: 248 RVHGLELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIV 307
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
FT I+ C+ G + + ++ IS + S +I CK + +EA L+
Sbjct: 308 AFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRA 480
+ + P +Y+ + C +G++ A+ I E+ E PD +T +I G+C GR
Sbjct: 368 R---LRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRT 424
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
A F +L +G P T IL + G +A +
Sbjct: 425 DKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSISDAESV 465
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 1/165 (0%)
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
F+ LI+ R KVN L L ++++ I S L+ + + + L+ AR+ + +
Sbjct: 203 VFSILIDCCIRERKVNMALKLTYKVDQFGIFPSRGVCISLLKEILRVHGLELAREFVEHM 262
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRA 480
++ + I YC G D+ +++ M+ +PD FT+ I C G
Sbjct: 263 LSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFL 322
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+A + +K+ G S D ++V + K G P EA ++ S
Sbjct: 323 KEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSF 367
>AT2G17525.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:7624178-7626058 FORWARD
LENGTH=626
Length = 626
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 130/463 (28%), Positives = 215/463 (46%), Gaps = 49/463 (10%)
Query: 112 HSFWTYNMLLRSLCQ-KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA---LVDRLDV 167
HS TY L LC + + +LL + G PD + ++ F L+ R+
Sbjct: 74 HSRSTYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVIS 133
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLF-RELMRSHSHLETSTFNVLM 226
+L+++ ++ + V++++L VLVK + +D A F R++M S H + T+ +LM
Sbjct: 134 VVDLVSKF---GIKPSLKVFNSILDVLVKED-IDIAREFFTRKMMASGIHGDVYTYGILM 189
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE------- 279
GL + + FK L M++ G +P+ V YNTLLH LC+ +V RAR L+ E
Sbjct: 190 KGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRARSLMSEMKEPNDV 249
Query: 280 -------------------VGLKSKFS----PNVRSYTTVISGYCKLSKMKEASSLFDEM 316
V L+ FS P+V + T V+ C ++ EA + + +
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERV 309
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
+ G K + N+L+ G+ +G M A + +M G P+V T+ LI GYC VG +
Sbjct: 310 ESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGML 369
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI--YN 434
+ LD +++M T I + TF+ LI L R + +L ++ +D V I YN
Sbjct: 370 DSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYN 429
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
VI G+ K ++A +++M EK P + + C KG D + +M+ G
Sbjct: 430 CVIYGFYKENRWEDALEFLLKM-EKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSY 537
P I+S CL+ + +I+ESL E D + + Y
Sbjct: 489 GVPS----IIVSHCLIHR--YSQHGKIEESL-ELINDMVTRGY 524
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 112/428 (26%), Positives = 185/428 (43%), Gaps = 41/428 (9%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K + S +N +L L ++ + + + M G D G L+ +L +R+
Sbjct: 140 KFGIKPSLKVFNSILDVLVKEDIDIAREFFTRKMMASGIHGDVYTYGILMKGLSLTNRIG 199
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+LL + + V NAVVY+ LL L K+ K+ A R LM TFN+L+
Sbjct: 200 DGFKLLQIMKTSGVAPNAVVYNTLLHALCKNGKVGRA----RSLMSEMKEPNDVTFNILI 255
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
C+ + ++ L S G PD+VT ++ LC V A ++L+ V K
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGG- 314
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
+V + T++ GYC L KM+ A F EM+R G PN T+N LI G+ VG +DSAL
Sbjct: 315 KVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALD 374
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI--SASLHTFSVLISY 404
+ M + TF +LI G G+ + GL + M + A + ++ +I
Sbjct: 375 TFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYG 434
Query: 405 LCKSNRLQEARDLLRQLKR---------------------TDI------------VPQPS 431
K NR ++A + L ++++ D+ VP
Sbjct: 435 FYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGVPSII 494
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
+ + +I Y + G ++E+ ++ +M + P TF +I G C + + + I M
Sbjct: 495 VSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKFVEDM 554
Query: 491 LATGCSPD 498
GC PD
Sbjct: 555 AERGCVPD 562
Score = 109 bits (273), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 175/418 (41%), Gaps = 15/418 (3%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
GFK Q + V + YN LL +LC+ G A+ L M K P+ L+
Sbjct: 201 GFKLLQIMKTS-GVAPNAVVYNTLLHALCKNGKVGRARSLMSEM----KEPNDVTFNILI 255
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
S++ +L S LL + + V ++ VL ++ +A+ + +
Sbjct: 256 SAYCNEQKLIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGK 315
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
++ N L+ G C+ G + A +F M G P++ TYN L+ G C + +D A D
Sbjct: 316 VDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGMLDSALDT 375
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT--FNSLIDG 334
++ + N ++ T+I G + + + + M S T A +N +I G
Sbjct: 376 FNDMKTDA-IRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPYNCVIYG 434
Query: 335 FVKVGNMDSALGIYKKM--LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
F K + AL KM LF P V + + C G ++ + +M
Sbjct: 435 FYKENRWEDALEFLLKMEKLF----PRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEGGV 490
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
S+ LI + +++E+ +L+ + +P+ S +N VI G+CK V
Sbjct: 491 PSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGIKF 550
Query: 453 VVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
V +M E+ C PD ++ L+ C+KG A ++F +M+ PD L CL
Sbjct: 551 VEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLMFCL 608
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 129/281 (45%), Gaps = 17/281 (6%)
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
SA E F++ + F S TY L H LC + D LL E+ P+
Sbjct: 55 SASGALETFRWASTFPGFIHSRS--TYRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDD 112
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY-K 349
+ T+I G+ + +K S+ D + + G KP+ FNS++D VK ++D A + +
Sbjct: 113 AIFVTIIRGFGRARLIKRVISVVDLVSKFGIKPSLKVFNSILDVLVK-EDIDIAREFFTR 171
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
KM+ G DV T+ L++G ++ G L M T ++ + ++ L+ LCK+
Sbjct: 172 KMMASGIHGDVYTYGILMKGLSLTNRIGDGFKLLQIMKTSGVAPNAVVYNTLLHALCKNG 231
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-----KPDK 464
++ AR L+ ++K P +N +I YC + ++ ++ EKC PD
Sbjct: 232 KVGRARSLMSEMKE----PNDVTFNILISAYCNEQKLIQSMVLL----EKCFSLGFVPDV 283
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
T T ++ C +GR +A+ + ++ + G D + L
Sbjct: 284 VTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNTL 324
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 152/363 (41%), Gaps = 38/363 (10%)
Query: 116 TYNMLLRSLC-QKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
T+N+L+ + C ++ L S LL C G +PD + ++ R+ + E+L
Sbjct: 250 TFNILISAYCNEQKLIQSMVLLEKCFSL-GFVPDVVTVTKVMEVLCNEGRVSEALEVLER 308
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ +V+ V + L+ K+ A F E+ R T+N+L+ G C G
Sbjct: 309 VESKGGKVDVVACNTLVKGYCALGKMRVAQRFFIEMERKGYLPNVETYNLLIAGYCDVGM 368
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC---------RIKEV--------------- 270
+D A N M++ + T+NTL+ GL +I E+
Sbjct: 369 LDSALDTFNDMKTDAIRWNFATFNTLIRGLSIGGRTDDGLKILEMMQDSDTVHGARIDPY 428
Query: 271 ----------DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
+R D L+ + K P + + C+ M + + +D+M G
Sbjct: 429 NCVIYGFYKENRWEDALEFLLKMEKLFPRAVDRSFKLISLCEKGGMDDLKTAYDQMIGEG 488
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
P+ + LI + + G ++ +L + M+ G P TF ++I G+C+ KV G+
Sbjct: 489 GVPSIIVSHCLIHRYSQHGKIEESLELINDMVTRGYLPRSSTFNAVIIGFCKQDKVMNGI 548
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+M R +++ L+ LC +Q+A L ++ IVP PS+++ ++ +
Sbjct: 549 KFVEDMAERGCVPDTESYNPLLEELCVKGDIQKAWLLFSRMVEKSIVPDPSMWSSLM--F 606
Query: 441 CKS 443
C S
Sbjct: 607 CLS 609
>AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29068620-29069828 REVERSE
LENGTH=402
Length = 402
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 147/287 (51%), Gaps = 3/287 (1%)
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
L +N L+ L G V+E + M SPDI T+NTL++G C++ V A+
Sbjct: 118 LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQY 177
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
+ + +++ P+ +YT+ I+G+C+ ++ A +F EM ++G N ++ LI G
Sbjct: 178 VTWL-IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLF 236
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
+ +D AL + KM C P+V T+T LI+ C G+ + ++L+ +M+ I
Sbjct: 237 EAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDC 296
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
++VLI C + L EA LL + ++P YN +I G+CK NV +A ++ +M
Sbjct: 297 MYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKK-NVHKAMGLLSKM 355
Query: 457 -EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
E+ PD T+ LIAG C G A + M +G P++ TV
Sbjct: 356 LEQNLVPDLITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRTV 402
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 175/380 (46%), Gaps = 14/380 (3%)
Query: 80 TPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGL-HSSAKLLYD 138
TPS V + +P F + N H+ +Y L+ LC + + + K+
Sbjct: 26 TPSHVSSLFSLNLDPQTALSFSDWISRIPNFKHNVTSYASLVTLLCSQEIPYEVPKITIL 85
Query: 139 CMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHN 198
++ + D+ V F R S E+ K ++ Y+NLLS L +
Sbjct: 86 MIKSCNSVRDA----LFVVDFCRTMRKGDSFEI-------KYKLTPKCYNNLLSSLARFG 134
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
+++ L+ E++ + TFN L+ G C G V EA +++ + GC PD TY
Sbjct: 135 LVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYT 194
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+ + G CR KEVD A + KE+ ++ N SYT +I G + K+ EA SL +M
Sbjct: 195 SFITGHCRRKEVDAAFKVFKEMT-QNGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKD 253
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
PN T+ LID G A+ ++K+M G PD +T LI+ +C ++
Sbjct: 254 DNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDE 313
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L M + ++ T++ LI CK N + +A LL ++ ++VP YN +I
Sbjct: 314 ASGLLEHMLENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIA 372
Query: 439 GYCKSGNVDEANAIVVEMEE 458
G C SGN+D A ++ MEE
Sbjct: 373 GQCSSGNLDSAYRLLSLMEE 392
Score = 139 bits (351), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/275 (32%), Positives = 140/275 (50%), Gaps = 4/275 (1%)
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
YN LL L R V+ + L E+ L+ SP++ ++ T+++GYCKL + EA +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEM-LEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWL 181
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
++G P+ FT+ S I G + +D+A ++K+M +GC + V++T LI G K+
Sbjct: 182 IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKI 241
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ L L +M N ++ T++VLI LC S + EA +L +Q+ + I P +Y +
Sbjct: 242 DEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVL 301
Query: 437 IDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I +C +DEA+ ++ M E P+ T+ LI G C K A+ + KML
Sbjct: 302 IQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFC-KKNVHKAMGLLSKMLEQNL 360
Query: 496 SPDEITVRILSSCLLKSGMPGEAARIKESLHENQG 530
PD IT L + SG A R+ SL E G
Sbjct: 361 VPDLITYNTLIAGQCSSGNLDSAYRLL-SLMEESG 394
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 120/260 (46%), Gaps = 1/260 (0%)
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
VD R + K + K+ + Y ++S + ++E L+ EM P+ +TFN
Sbjct: 100 VDFCRTMRKGDSFEIKYKLTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFN 159
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
+L++G+ K+G + A ++ GC PD T+TS I G+CR +V+ ++ EM
Sbjct: 160 TLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQN 219
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
+ +++ LI L ++ ++ EA LL ++K + P Y +ID C SG EA
Sbjct: 220 GCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEA 279
Query: 450 NAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
+ +M E KPD +T+LI C +A + ML G P+ IT L
Sbjct: 280 MNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKG 339
Query: 509 LLKSGMPGEAARIKESLHEN 528
K + + + L +N
Sbjct: 340 FCKKNVHKAMGLLSKMLEQN 359
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 1/138 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L+ +LC G S A L+ M G PD + L+ SF D LD + LL
Sbjct: 262 TYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHM 321
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N + N + Y+ L+ K N + A+ L +++ + + T+N L+ G CS+G++
Sbjct: 322 LENGLMPNVITYNALIKGFCKKN-VHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNL 380
Query: 236 DEAFKFLNGMRSFGCSPD 253
D A++ L+ M G P+
Sbjct: 381 DSAYRLLSLMEESGLVPN 398
>AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:26339876-26341789 REVERSE
LENGTH=637
Length = 637
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 193/422 (45%), Gaps = 40/422 (9%)
Query: 76 GKHLTPSLVLEVVKRLNNP-ILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAK 134
G L P L+ V+ R + LG++FF + ++ HS Y +++ L + +
Sbjct: 108 GVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVW 167
Query: 135 LLYDCMRFDG-KLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
L + MR + +L + L LV FA D + + E+L E + + V
Sbjct: 168 GLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYV------- 220
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
F L+ LC G V +A K MR +
Sbjct: 221 ----------------------------FGCLLDALCKHGSVKDAAKLFEDMR-MRFPVN 251
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
+ + +LL+G CR+ ++ A+ +L ++ ++ F P++ YT ++SGY KM +A L
Sbjct: 252 LRYFTSLLYGWCRVGKMMEAKYVLVQMN-EAGFEPDIVDYTNLLSGYANAGKMADAYDLL 310
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
+M R G +PNA + LI KV M+ A+ ++ +M + C DVVT+T+L+ G+C+
Sbjct: 311 RDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKW 370
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
GK++ + +M + + S T+ ++ K +E +L+ ++++ + P IY
Sbjct: 371 GKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIY 430
Query: 434 NHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
N VI CK G V EA + EMEE P TF I+I G +G +A F +M+
Sbjct: 431 NVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVT 490
Query: 493 TG 494
G
Sbjct: 491 RG 492
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 150/345 (43%), Gaps = 39/345 (11%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLNG 244
VY +++ +L K + L E+ + + L E F VL+ SA V +A + L+
Sbjct: 149 VYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDE 208
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M FG PD + LL L CK
Sbjct: 209 MPKFGFEPDEYVFGCLLDAL------------------------------------CKHG 232
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+K+A+ LF++M R N F SL+ G+ +VG M A + +M G PD+V +T
Sbjct: 233 SVKDAAKLFEDM-RMRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYT 291
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+L+ GY GK+ DL +M R + + ++VLI LCK +R++EA + +++R
Sbjct: 292 NLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERY 351
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDA 483
+ Y ++ G+CK G +D+ ++ +M +K P + T+ ++ H K +
Sbjct: 352 ECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEEC 411
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+ + KM PD ++ K G EA R+ + EN
Sbjct: 412 LELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEEN 456
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 125/249 (50%), Gaps = 2/249 (0%)
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
I Y +++ L ++++ L++E+ ++ + ++ + +K+A +
Sbjct: 147 IEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVL 206
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
DEM + G +P+ + F L+D K G++ A +++ M P ++ FTSL+ G+CRV
Sbjct: 207 DEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMR-FPVNLRYFTSLLYGWCRV 265
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
GK+ + +MN + ++ L+S + ++ +A DLLR ++R P + Y
Sbjct: 266 GKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCY 325
Query: 434 NHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
+I CK ++EA + VEME +C+ D T+T L++G C G+ ++ M+
Sbjct: 326 TVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIK 385
Query: 493 TGCSPDEIT 501
G P E+T
Sbjct: 386 KGLMPSELT 394
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/408 (25%), Positives = 186/408 (45%), Gaps = 22/408 (5%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTRE--KLNVHHSFWTYNMLLRSLCQKG-LHSSAKL 135
+ P L + +V+R + + K + E K + + LL +LC+ G + +AKL
Sbjct: 181 IEPELFVVLVQRFASADMVKKAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKL 240
Query: 136 LYDC-MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVL 194
D MRF L R L+ + V ++ +K +L + + + V Y NLLS
Sbjct: 241 FEDMRMRFPVNL---RYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGY 297
Query: 195 VKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDI 254
K+ DA L R++ R + + VL+ LC ++EA K M + C D+
Sbjct: 298 ANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADV 357
Query: 255 VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFD 314
VTY L+ G C+ ++D+ +L ++ +K P+ +Y ++ + K +E L +
Sbjct: 358 VTYTALVSGFCKWGKIDKCYIVLDDM-IKKGLMPSELTYMHIMVAHEKKESFEECLELME 416
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
+M + P+ +N +I K+G + A+ ++ +M +G P V TF +I G G
Sbjct: 417 KMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQG 476
Query: 375 KVNYGLDLWHEMNTRNI-SASLH-TFSVLISYLCKSNRLQEARDLLRQLKRTDI----VP 428
+ D + EM TR + S S + T +L++ + K +L+ A+D+ + V
Sbjct: 477 CLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKGACELNVL 536
Query: 429 QPSIYNHVI--DGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAG 473
+I+ H + GY K EA + +EM E P TF L+ G
Sbjct: 537 SWTIWIHALFSKGYEK-----EACSYCIEMIEMDFMPQPDTFAKLMKG 579
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 110/307 (35%), Gaps = 72/307 (23%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y LL G + A L MR G P++ L+ + VDR++ + ++ E +
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEME 349
Query: 177 CNKVQVNAVVYDNLLSVLVKHNK-------LDDAI------------------------- 204
+ + + V Y L+S K K LDD I
Sbjct: 350 RYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFE 409
Query: 205 -CL-FRELMRS-HSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
CL E MR H + +NV++ C G+V EA + N M G SP + T+ ++
Sbjct: 410 ECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMI 469
Query: 262 HGLC-------------------------------------RIKEVDRARDLLKEVGLKS 284
+GL + K+++ A+D+ + K
Sbjct: 470 NGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITSKG 529
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
NV S+T I KEA S EM P TF L+ G K+ N + A
Sbjct: 530 ACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFA 589
Query: 345 LGIYKKM 351
I +K+
Sbjct: 590 GEITEKV 596
>AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18445730-18447646 REVERSE
LENGTH=638
Length = 638
Score = 145 bits (366), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 163/336 (48%), Gaps = 5/336 (1%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V +++ +L K + L E+ +++ L E F VLM SA V +A + L+
Sbjct: 133 VCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDE 192
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M +G PD + LL LC+ V A + ++ ++ KF PN+R +T+++ G+C+
Sbjct: 193 MPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFED--MREKFPPNLRYFTSLLYGWCREG 250
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
K+ EA + +M +G +P+ F +L+ G+ G M A + M G P+V +T
Sbjct: 251 KLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDMRKRGFEPNVNCYT 310
Query: 365 SLIEGYCRVGK-VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
LI+ CR K ++ + ++ EM A + T++ LIS CK + + +L +++
Sbjct: 311 VLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRK 370
Query: 424 TDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPD 482
++P Y ++ + K +E ++ +M+ + C PD + ++I C G +
Sbjct: 371 KGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKE 430
Query: 483 AIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
A+ ++ +M A G SP T I+ + G EA
Sbjct: 431 AVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEA 466
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 174/366 (47%), Gaps = 12/366 (3%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K F+ REK + ++T LL C++G AK + M+ G PD + L+S
Sbjct: 223 KVFEDMREKFPPNLRYFTS--LLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSG 280
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK-LDDAICLFRELMRSHSHL 217
+A ++ + +L+ + + + N Y L+ L + K +D+A+ +F E+ R
Sbjct: 281 YAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEA 340
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ T+ L+ G C G +D+ + L+ MR G P VTY ++ + ++ + +L+
Sbjct: 341 DIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELI 400
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+++ + P++ Y VI CKL ++KEA L++EM+ +G P TF +I+GF
Sbjct: 401 EKMKRRG-CHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTS 459
Query: 338 VGNMDSALGIYKKMLFHG--CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
G + A +K+M+ G P T SL+ R K+ D+W ++ + S L
Sbjct: 460 QGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCEL 519
Query: 396 H--TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
+ +++ I L ++EA + D++PQP+ Y ++ G K N I
Sbjct: 520 NVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYN----RTIA 575
Query: 454 VEMEEK 459
E+ EK
Sbjct: 576 AEITEK 581
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/500 (23%), Positives = 210/500 (42%), Gaps = 49/500 (9%)
Query: 71 VLSYFGKHLTPSLVLEVVKRLNNP-ILGFKFFQFTREKLNVHHSFW---TYNMLLRSLCQ 126
L+ G L P L++ V+ R + LG++FF + ++ HS+ + M+L + Q
Sbjct: 87 ALNESGIDLRPGLIIRVLSRCGDAGNLGYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQ 146
Query: 127 KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVV 186
G + L+ + + + +L + L L+ FA + + + E+L E ++ + V
Sbjct: 147 FG--AVWGLIEEMRKTNPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYV 204
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
+ LL L K+ + +A +F E MR F L+ G C G + EA + L M+
Sbjct: 205 FGCLLDALCKNGSVKEASKVF-EDMREKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMK 263
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR--------------- 291
G PDIV + LL G ++ A DL+ ++ K F PNV
Sbjct: 264 EAGLEPDIVVFTNLLSGYAHAGKMADAYDLMNDM-RKRGFEPNVNCYTVLIQALCRTEKR 322
Query: 292 ---------------------SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
+YT +ISG+CK + + S+ D+M + G P+ T+
Sbjct: 323 MDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQ 382
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
++ K + L + +KM GC PD++ + +I C++G+V + LW+EM
Sbjct: 383 IMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANG 442
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI--VPQPSIYNHVIDGYCKSGNVDE 448
+S + TF ++I+ L EA + +++ I PQ +++ + ++
Sbjct: 443 LSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEM 502
Query: 449 ANAIVVEMEEK---CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
A + + K C+ + +TI I KG +A M+ P T L
Sbjct: 503 AKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKL 562
Query: 506 SSCLLKSGMPGEAARIKESL 525
L K AA I E +
Sbjct: 563 MKGLNKLYNRTIAAEITEKV 582
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 108/250 (43%), Gaps = 3/250 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ TY L+ C+ G+ + D MR G +P ++ + ++
Sbjct: 334 ERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQF 393
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ EL+ + + + ++Y+ ++ + K ++ +A+ L+ E+ + TF ++
Sbjct: 394 EECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIM 453
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFG--CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
+ G S G + EA M S G +P T +LL+ L R +++ A+D+ + K
Sbjct: 454 INGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNK 513
Query: 284 -SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
S NV ++T I +KEA S +M P T+ L+ G K+ N
Sbjct: 514 TSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRT 573
Query: 343 SALGIYKKML 352
A I +K++
Sbjct: 574 IAAEITEKVV 583
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 169/341 (49%), Gaps = 9/341 (2%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
++S L ++ K+ A +F F+ L+ +G +EA N M+ +G
Sbjct: 239 MISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYG 298
Query: 250 CSPDIVTYNTLL----HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
P++VTYN ++ G K+V + D ++ G++ P+ ++ ++++ +
Sbjct: 299 LRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQ----PDRITFNSLLAVCSRGGL 354
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ A +LFDEM + + F++N+L+D K G MD A I +M P+VV++++
Sbjct: 355 WEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYST 414
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
+I+G+ + G+ + L+L+ EM I+ +++ L+S K R +EA D+LR++
Sbjct: 415 VIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVG 474
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAI 484
I YN ++ GY K G DE + EM+ E P+ T++ LI G+ G +A+
Sbjct: 475 IKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAM 534
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
IF + + G D + L L K+G+ G A + + +
Sbjct: 535 EIFREFKSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEM 575
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 171/345 (49%), Gaps = 14/345 (4%)
Query: 112 HSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVD-------R 164
++ + ++ L+ + + GLH A +++ M+ G P+ LV+ A++D
Sbjct: 266 NTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPN------LVTYNAVIDACGKGGME 319
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
+ E Q N VQ + + +++LL+V + + A LF E+ + ++N
Sbjct: 320 FKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNT 379
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ +C G +D AF+ L M P++V+Y+T++ G + D A +L E+
Sbjct: 380 LLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLG 439
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
V SY T++S Y K+ + +EA + EM G K + T+N+L+ G+ K G D
Sbjct: 440 IALDRV-SYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
++ +M P+++T+++LI+GY + G ++++ E + + A + +S LI
Sbjct: 499 KKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDA 558
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
LCK+ + A L+ ++ + I P YN +ID + +S +D +
Sbjct: 559 LCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRS 603
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 146/305 (47%), Gaps = 8/305 (2%)
Query: 116 TYNMLLRSLCQKGLH-SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
TYN ++ + + G+ +D M+ +G PD L++ + + ++ L E
Sbjct: 305 TYNAVIDACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDE 364
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+++ + Y+ LL + K ++D A + ++ +++ ++ G AG
Sbjct: 365 MTNRRIEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGR 424
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE---VGLKSKFSPNVR 291
DEA MR G + D V+YNTLL ++ + A D+L+E VG+K +V
Sbjct: 425 FDEALNLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKK----DVV 480
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y ++ GY K K E +F EM R PN T+++LIDG+ K G A+ I+++
Sbjct: 481 TYNALLGGYGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREF 540
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
G DVV +++LI+ C+ G V + L EM IS ++ T++ +I +S +
Sbjct: 541 KSAGLRADVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATM 600
Query: 412 QEARD 416
+ D
Sbjct: 601 DRSAD 605
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/322 (22%), Positives = 127/322 (39%), Gaps = 63/322 (19%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
+ ++YN LL ++C+ G A + M +P+ ++ FA R D +
Sbjct: 370 IEQDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEAL 429
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
L E + + ++ V Y+ LLS+ K + ++A+ + RE+ + T+N L+GG
Sbjct: 430 NLFGEMRYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGY 489
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE---VGLKSKF 286
G DE K M+ P+++TY+TL+ G + A ++ +E GL++
Sbjct: 490 GKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRA-- 547
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP---------NAFTFNSLIDGFVK 337
+V Y+ +I CK + A SL DEM + G P +AF ++ +D
Sbjct: 548 --DVVLYSALIDALCKNGLVGSAVSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Query: 338 VGNMDS-----------------------------------------------ALGIYKK 350
N S L +++K
Sbjct: 606 YSNGGSLPFSSSALSALTETEGNRVIQLFGQLTTESNNRTTKDCEEGMQELSCILEVFRK 665
Query: 351 MLFHGCPPDVVTFTSLIEGYCR 372
M P+VVTF++++ R
Sbjct: 666 MHQLEIKPNVVTFSAILNACSR 687
>AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8531226-8533266 FORWARD
LENGTH=593
Length = 593
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 183/386 (47%), Gaps = 12/386 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN L++ LC A L++ M G P+ +V + + + + L E
Sbjct: 193 SYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEE 252
Query: 176 QCNKVQVNA----VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+ Q NA V+ L+ K+ + A+ +++E+ + + ++ +NV++ GLCS
Sbjct: 253 ILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCS 312
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
+G++ A+ F+ M G +PD+ TYNTL+ LC+ + D A DL + +P+
Sbjct: 313 SGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQ-NGGVAPDQI 371
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
SY +I G C + A+ M +S P +N +IDG+ + G+ SAL + M
Sbjct: 372 SYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLM 431
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW---HEMNTRNISASLHTFSVLISYLCKS 408
L +G P+V T +LI GY + G++ +D W +EM + I T+++L+ C
Sbjct: 432 LSYGVKPNVYTNNALIHGYVKGGRL---IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTL 488
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF 467
L+ A L ++ R P Y ++ G C G + +A +++ ++ D F
Sbjct: 489 GHLRLAFQLYDEMLRRGCQPDIITYTELVRGLCWKGRLKKAESLLSRIQATGITIDHVPF 548
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLAT 493
IL + R +A +++ K LAT
Sbjct: 549 LILAKKYTRLQRPGEAYLVYKKWLAT 574
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 188/408 (46%), Gaps = 6/408 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N LL LC+ G A L MR G P+ L+ V+ +D + L
Sbjct: 158 THNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLFNTM 217
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKL-DDAICLFRELM---RSHSHLETSTFNVLMGGLCS 231
++ N V + ++ L + + ++ L E++ ++++ L+ +LM
Sbjct: 218 NKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSCFK 277
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G+V +A + M D V YN ++ GLC + A + ++ +K +P+V
Sbjct: 278 NGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDM-VKRGVNPDVF 336
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y T+IS CK K EA L M G P+ ++ +I G G+++ A M
Sbjct: 337 TYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFLLSM 396
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
L P+V+ + +I+GY R G + L + + M + + +++T + LI K RL
Sbjct: 397 LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKGGRL 456
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+A + +++ T I P + YN ++ C G++ A + EM + C+PD T+T L
Sbjct: 457 IDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDIITYTEL 516
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+ G C KGR A + ++ ATG + D + IL+ + PGEA
Sbjct: 517 VRGLCWKGRLKKAESLLSRIQATGITIDHVPFLILAKKYTRLQRPGEA 564
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 177/362 (48%), Gaps = 6/362 (1%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
++ L +LD + L + + V + +++LL+ L K ++ A L RE+
Sbjct: 127 IMRDLCLQGKLDAALWLRKKMIYSGVIPGLITHNHLLNGLCKAGYIEKADGLVREMREMG 186
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV-DRA 273
++N L+ GLCS +VD+A N M +G P+ VT N ++H LC+ + +
Sbjct: 187 PSPNCVSYNTLIKGLCSVNNVDKALYLFNTMNKYGIRPNRVTCNIIVHALCQKGVIGNNN 246
Query: 274 RDLLKEVGLKSKF-SPNVRSYTTVISGYC-KLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
+ LL+E+ S+ +P T++ C K + +A ++ EM + ++ +N +
Sbjct: 247 KKLLEEILDSSQANAPLDIVICTILMDSCFKNGNVVQALEVWKEMSQKNVPADSVVYNVI 306
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
I G GNM +A G M+ G PDV T+ +LI C+ GK + DL M +
Sbjct: 307 IRGLCSSGNMVAAYGFMCDMVKRGVNPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGV 366
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
+ ++ V+I LC + A + L + ++ ++P+ ++N VIDGY + G+ A +
Sbjct: 367 APDQISYKVIIQGLCIHGDVNRANEFLLSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALS 426
Query: 452 IV-VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL--SSC 508
++ + + KP+ +T LI G+ GR DA + +M +T PD T +L ++C
Sbjct: 427 VLNLMLSYGVKPNVYTNNALIHGYVKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAAC 486
Query: 509 LL 510
L
Sbjct: 487 TL 488
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 170/377 (45%), Gaps = 13/377 (3%)
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSV-------LVKHNKLDDAICLFRELMRSHSHL 217
L S + LA + + Q + YD+ LS+ L KLD A+ L ++++ S
Sbjct: 95 LKSSLDRLASLRESVCQTKSFDYDDCLSIHSSIMRDLCLQGKLDAALWLRKKMIYSGVIP 154
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
T N L+ GLC AG +++A + MR G SP+ V+YNTL+ GLC + VD+A L
Sbjct: 155 GLITHNHLLNGLCKAGYIEKADGLVREMREMGPSPNCVSYNTLIKGLCSVNNVDKALYLF 214
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNA----FTFNSLID 333
+ K PN + ++ C+ + + E ++ NA L+D
Sbjct: 215 NTMN-KYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMD 273
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
K GN+ AL ++K+M P D V + +I G C G + +M R ++
Sbjct: 274 SCFKNGNVVQALEVWKEMSQKNVPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGVNP 333
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI- 452
+ T++ LIS LCK + EA DL ++ + P Y +I G C G+V+ AN
Sbjct: 334 DVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANEFL 393
Query: 453 VVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
+ ++ P+ + ++I G+ G A+ + ML+ G P+ T L +K
Sbjct: 394 LSMLKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGYVKG 453
Query: 513 GMPGEAARIKESLHENQ 529
G +A +K + +
Sbjct: 454 GRLIDAWWVKNEMRSTK 470
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 163/331 (49%), Gaps = 13/331 (3%)
Query: 104 TREKLNVHHSFWTYNMLLRSLCQKGL--HSSAKLL---YDCMRFDGKLPDSRLLGFLVSS 158
T K + + T N+++ +LCQKG+ +++ KLL D + + L + S
Sbjct: 216 TMNKYGIRPNRVTCNIIVHALCQKGVIGNNNKKLLEEILDSSQANAPLDIVICTILMDSC 275
Query: 159 FA---LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS 215
F +V L+V KE+ +Q N V ++VVY+ ++ L + A ++++
Sbjct: 276 FKNGNVVQALEVWKEM---SQKN-VPADSVVYNVIIRGLCSSGNMVAAYGFMCDMVKRGV 331
Query: 216 HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARD 275
+ + T+N L+ LC G DEA M++ G +PD ++Y ++ GLC +V+RA +
Sbjct: 332 NPDVFTYNTLISALCKEGKFDEACDLHGTMQNGGVAPDQISYKVIIQGLCIHGDVNRANE 391
Query: 276 LLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
L + LKS P V + VI GY + A S+ + M G KPN +T N+LI G+
Sbjct: 392 FLLSM-LKSSLLPEVLLWNVVIDGYGRYGDTSSALSVLNLMLSYGVKPNVYTNNALIHGY 450
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
VK G + A + +M PD T+ L+ C +G + L+ EM R +
Sbjct: 451 VKGGRLIDAWWVKNEMRSTKIHPDTTTYNLLLGAACTLGHLRLAFQLYDEMLRRGCQPDI 510
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
T++ L+ LC RL++A LL +++ T I
Sbjct: 511 ITYTELVRGLCWKGRLKKAESLLSRIQATGI 541
>AT5G08310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2672756-2675254 REVERSE
LENGTH=832
Length = 832
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 138/555 (24%), Positives = 239/555 (43%), Gaps = 76/555 (13%)
Query: 31 FTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSY--FGKHLTPSLVLEVV 88
FTLT + C+ G + + F +I+S +L + V+S+ +G+ ++E++
Sbjct: 215 FTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHISTILVVSFCKWGQVDKAFELIEML 274
Query: 89 K----RLNNP-----ILGF-------KFFQFTRE--KLNVHHSFWTYNMLLRSLCQKGLH 130
+ RLN I GF K FQ + ++ ++ Y++L+ LC+
Sbjct: 275 EERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDL 334
Query: 131 SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNL 190
A LY ++ G PD +LG L+ SF+ L E++ +K V ++Y +L
Sbjct: 335 EMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVII-GDIDKKSV-MLLYKSL 392
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
++++ + +A + LM ++ + V E K L
Sbjct: 393 FEGFIRNDLVHEAYSFIQNLMGNYE----------------SDGVSEIVKLLKDHNK-AI 435
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
PD + + +++ L + +VD A LL ++ +++ P Y +I G CK + +E+
Sbjct: 436 LPDSDSLSIVINCLVKANKVDMAVTLLHDI-VQNGLIPGPMMYNNIIEGMCKEGRSEESL 494
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
L EM +G +P+ FT N + + + AL + KKM F+G P + T L++
Sbjct: 495 KLLGEMKDAGVEPSQFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKL 554
Query: 371 CRVGK-----------------------------------VNYGLDLWHEMNTRNISASL 395
C G+ V+ GL+L+ ++ +
Sbjct: 555 CENGRAVDACKYLDDVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHCPDV 614
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
+ VLI LCK+ R EA L ++ + P + YN +IDG+CK G +D + +V
Sbjct: 615 IAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVR 674
Query: 456 M-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
M E++ PD T+T LI G C GR +AI + +M C P+ IT L L K G
Sbjct: 675 MYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGW 734
Query: 515 PGEAARIKESLHENQ 529
GEA + E +
Sbjct: 735 SGEALVYFREMEEKE 749
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 173/395 (43%), Gaps = 39/395 (9%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
F F R L VH ++ L+ + G+ KLL D + LPDS L +++
Sbjct: 393 FEGFIRNDL-VHEAYSFIQNLMGNYESDGVSEIVKLLKDHNK--AILPDSDSLSIVINCL 449
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
+++D++ LL + N + ++Y+N++ + K + ++++ L E+ +
Sbjct: 450 VKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPSQ 509
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDI------------------------- 254
T N + G L D A L MR +G P I
Sbjct: 510 FTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLDD 569
Query: 255 ----------VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
V + GL + + VDR +L +++ + P+V +Y +I CK
Sbjct: 570 VAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDI-CANGHCPDVIAYHVLIKALCKAC 628
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ EA LF+EM G KP T+NS+IDG+ K G +D L +M PDV+T+T
Sbjct: 629 RTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEGEIDRGLSCIVRMYEDEKNPDVITYT 688
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
SLI G C G+ + + W+EM ++ + TF LI LCK EA R+++
Sbjct: 689 SLIHGLCASGRPSEAIFRWNEMKGKDCYPNRITFMALIQGLCKCGWSGEALVYFREMEEK 748
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
++ P ++Y ++ + S N++ I EM K
Sbjct: 749 EMEPDSAVYLSLVSSFLSSENINAGFGIFREMVHK 783
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 114/517 (22%), Positives = 215/517 (41%), Gaps = 78/517 (15%)
Query: 55 KIVSTLFLHSNS--LDTRVLSYFGKH-----------LTPSLVLEVVKRLNNPI----LG 97
K+ +T FLH N L ++ F + L+P L +VV+ + N L
Sbjct: 30 KLDNTRFLHPNQSKLAQNLIVIFTRQPFSPDDPELLILSPELNTKVVETVLNGFKRWGLA 89
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
+ FF + ++ + + YN + L + ++S K L + GF +
Sbjct: 90 YLFFNWASKQEGYRNDMYAYNAMASILSRARQNASLKALVVDVLNSRCFMSPGAFGFFIR 149
Query: 158 SFALVDRLDVSKELLAEAQCNKVQV-NAVVYDNLLSVLVKHN--KLDDAICLFRELMRSH 214
+D + + + + V NA Y+ LL + K N ++ +E+
Sbjct: 150 CLGNAGLVDEASSVFDRVREMGLCVPNAYTYNCLLEAISKSNSSSVELVEARLKEMRDCG 209
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
H + T ++ C+ G + A N + S G + ++ L+ C+ +VD+A
Sbjct: 210 FHFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWLDEHIS-TILVVSFCKWGQVDKAF 268
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+L+ E+ + N ++Y +I G+ K S++ +A LF++M R G + ++ LI G
Sbjct: 269 ELI-EMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGG 327
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPD---------------------------------VV 361
K +++ AL +Y ++ G PPD ++
Sbjct: 328 LCKHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVML 387
Query: 362 TFTSLIEGYCRVGKV------------NYGLDLWHEM------NTRNISASLHTFSVLIS 403
+ SL EG+ R V NY D E+ + + I + S++I+
Sbjct: 388 LYKSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKAILPDSDSLSIVIN 447
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKP 462
L K+N++ A LL + + ++P P +YN++I+G CK G +E+ ++ EM++ +P
Sbjct: 448 CLVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEP 507
Query: 463 DKFTFTILIAGHCMKGRAP--DAIVIFYKMLATGCSP 497
+FT + C+ R A+ + KM G P
Sbjct: 508 SQFTLNCIYG--CLAERCDFVGALDLLKKMRFYGFEP 542
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 101/456 (22%), Positives = 185/456 (40%), Gaps = 56/456 (12%)
Query: 111 HHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKE 170
H +T +L+ C G A +++ + G L D + LV SF ++D + E
Sbjct: 211 HFDKFTLTPVLQVYCNTGKSERALSVFNEILSRGWL-DEHISTILVVSFCKWGQVDKAFE 269
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
L+ + +++N Y L+ VK +++D A LF ++ R + + + ++VL+GGLC
Sbjct: 270 LIEMLEERDIRLNYKTYCVLIHGFVKESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLC 329
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL------KEVGL-- 282
D++ A ++ G PD LL E+ R +++ K V L
Sbjct: 330 KHKDLEMALSLYLEIKRSGIPPDRGILGKLLCSFSEESELSRITEVIIGDIDKKSVMLLY 389
Query: 283 KSKFSPNVR--------SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
KS F +R S+ + G + + E L + +++ P++ + + +I+
Sbjct: 390 KSLFEGFIRNDLVHEAYSFIQNLMGNYESDGVSEIVKLLKDHNKA-ILPDSDSLSIVINC 448
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
VK +D A+ + ++ +G P + + ++IEG C+ G+ L L EM + S
Sbjct: 449 LVKANKVDMAVTLLHDIVQNGLIPGPMMYNNIIEGMCKEGRSEESLKLLGEMKDAGVEPS 508
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQL-----------------------------KRTD 425
T + + L + A DLL+++ K D
Sbjct: 509 QFTLNCIYGCLAERCDFVGALDLLKKMRFYGFEPWIKHTTFLVKKLCENGRAVDACKYLD 568
Query: 426 IVPQPSIYNHV------IDGYCKSGNVDEANAIVVEM--EEKCKPDKFTFTILIAGHCMK 477
V H+ IDG K+ VD + ++ C PD + +LI C
Sbjct: 569 DVAGEGFLGHMVASTAAIDGLIKNEGVDRGLELFRDICANGHC-PDVIAYHVLIKALCKA 627
Query: 478 GRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
R +A ++F +M++ G P T + K G
Sbjct: 628 CRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 113/245 (46%), Gaps = 13/245 (5%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL------DVSKELLA 173
L++ LC+ G A D + +G LG +V+S A +D L D EL
Sbjct: 550 LVKKLCENGRAVDACKYLDDVAGEG------FLGHMVASTAAIDGLIKNEGVDRGLELFR 603
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ N + + Y L+ L K + +A LF E++ +T+N ++ G C G
Sbjct: 604 DICANGHCPDVIAYHVLIKALCKACRTMEADILFNEMVSKGLKPTVATYNSMIDGWCKEG 663
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
++D + M +PD++TY +L+HGLC A E+ K + PN ++
Sbjct: 664 EIDRGLSCIVRMYEDEKNPDVITYTSLIHGLCASGRPSEAIFRWNEMKGKDCY-PNRITF 722
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
+I G CK EA F EM+ +P++ + SL+ F+ N+++ GI+++M+
Sbjct: 723 MALIQGLCKCGWSGEALVYFREMEEKEMEPDSAVYLSLVSSFLSSENINAGFGIFREMVH 782
Query: 354 HGCPP 358
G P
Sbjct: 783 KGRFP 787
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 144/335 (42%), Gaps = 20/335 (5%)
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLN-GMRSFGCSPDIVTYNTLLHGLCRI 267
EL+ L T ++ G G A+ F N + G D+ YN + L R
Sbjct: 63 ELLILSPELNTKVVETVLNGFKRWG---LAYLFFNWASKQEGYRNDMYAYNAMASILSRA 119
Query: 268 KEVDRARDLLKEVGLKSK--FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG-TKPN 324
++ + L+ +V L S+ SP + G L + EASS+FD + G PN
Sbjct: 120 RQNASLKALVVDV-LNSRCFMSPGAFGFFIRCLGNAGL--VDEASSVFDRVREMGLCVPN 176
Query: 325 AFTFNSLIDGFVKVGNMDSAL--GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
A+T+N L++ K + L K+M G D T T +++ YC GK L +
Sbjct: 177 AYTYNCLLEAISKSNSSSVELVEARLKEMRDCGFHFDKFTLTPVLQVYCNTGKSERALSV 236
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
++E+ +R H ++L+ CK ++ +A +L+ L+ DI Y +I G+ K
Sbjct: 237 FNEILSRGWLDE-HISTILVVSFCKWGQVDKAFELIEMLEERDIRLNYKTYCVLIHGFVK 295
Query: 443 SGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+D+A + +M D + +LI G C A+ ++ ++ +G PD
Sbjct: 296 ESRIDKAFQLFEKMRRMGMNADIALYDVLIGGLCKHKDLEMALSLYLEIKRSGIPPDR-- 353
Query: 502 VRILSSCLLKSGMPGEAARIKESLHENQGDSLKKS 536
IL L E +RI E + GD KKS
Sbjct: 354 -GILGKLLCSFSEESELSRITEVI---IGDIDKKS 384
>AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6666249-6668963 FORWARD
LENGTH=904
Length = 904
Score = 142 bits (357), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 113/486 (23%), Positives = 215/486 (44%), Gaps = 78/486 (16%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N L+ C+ G A+ ++ M PD LV + +D + +L + C
Sbjct: 370 NSLINGYCKSGQLVEAEQIFSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKL-CDQMC 428
Query: 178 NKVQVNAVV-YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
K V V+ Y+ LL + D + L++ +++ + + + + L+ L GD +
Sbjct: 429 QKEVVPTVMTYNILLKGYSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFN 488
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA K + + G D +T N ++ GLC++++V+ A+++L V + + P V++Y +
Sbjct: 489 EAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNI-FRCKPAVQTYQAL 547
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
GY K+ +KEA ++ + M+R G P +N+LI G K +++ + ++ G
Sbjct: 548 SHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIELRARGL 607
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P V T+ +LI G+C +G ++ EM + I+ +++ S + + L + +++ EA
Sbjct: 608 TPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACL 667
Query: 417 LLRQLKRTD--------------------------------------IVPQPSIYNHVID 438
LL+++ D +VP +YN I
Sbjct: 668 LLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIA 727
Query: 439 GYCKSGNVDEANAIVVEM--EEKCKPDKFTFTILIAG----------------HCMKGRA 480
G CK+G +++A + ++ ++ PD++T+TILI G +KG
Sbjct: 728 GLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGII 787
Query: 481 PDAIV-------------------IFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
P+ + + +K+ G +P+ IT L L+KSG EA R+
Sbjct: 788 PNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRL 847
Query: 522 KESLHE 527
KE + E
Sbjct: 848 KEKMIE 853
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 169/366 (46%), Gaps = 4/366 (1%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L++ +A++ ++ +L V N V Y +L+ K +++A +F L
Sbjct: 267 LINGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKK 326
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ + VLM G C G + +A + + M G + N+L++G C+ ++ A
Sbjct: 327 LVADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAE 386
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+ + S P+ +Y T++ GYC+ + EA L D+M + P T+N L+ G
Sbjct: 387 QIFSRMNDWS-LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKG 445
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
+ ++G L ++K ML G D ++ ++L+E ++G N + LW + R +
Sbjct: 446 YSRIGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTD 505
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
T +V+IS LCK ++ EA+++L + P Y + GY K GN+ EA A+
Sbjct: 506 TITLNVMISGLCKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKE 565
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIV-IFYKMLATGCSPDEITVRILSSCLLKS 512
ME K P + LI+G K R + + + ++ A G +P T L +
Sbjct: 566 YMERKGIFPTIEMYNTLISG-AFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNI 624
Query: 513 GMPGEA 518
GM +A
Sbjct: 625 GMIDKA 630
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/422 (25%), Positives = 190/422 (45%), Gaps = 15/422 (3%)
Query: 49 PEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEV-VKRLNNPILGF--------- 98
P+ + IV + S ++D ++ F K SL LE+ V N+ I G+
Sbjct: 223 PDVFTCSIVVNAYCRSGNVDKAMV--FAKETESSLGLELNVVTYNSLINGYAMIGDVEGM 280
Query: 99 -KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
+ + E+ V + TY L++ C+KGL A+ +++ ++ + D + G L+
Sbjct: 281 TRVLRLMSER-GVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGVLMD 339
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
+ ++ + + V+ N + ++L++ K +L +A +F +
Sbjct: 340 GYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWSLKP 399
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ T+N L+ G C AG VDEA K + M P ++TYN LL G RI L
Sbjct: 400 DHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVLSLW 459
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
K + LK + + S +T++ KL EA L++ + G + T N +I G K
Sbjct: 460 KMM-LKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCK 518
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
+ ++ A I + C P V T+ +L GY +VG + + M + I ++
Sbjct: 519 MEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEM 578
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
++ LIS K L + DL+ +L+ + P + Y +I G+C G +D+A A EM
Sbjct: 579 YNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMI 638
Query: 458 EK 459
EK
Sbjct: 639 EK 640
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 142/289 (49%), Gaps = 1/289 (0%)
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A + M SF SPD+ T + +++ CR VD+A KE NV +Y ++I
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
+GY + ++ + + M G N T+ SLI G+ K G M+ A +++ +
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
D + L++GYCR G++ + + M + + + LI+ CKS +L EA +
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 418 LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCM 476
++ + P YN ++DGYC++G VDEA + +M +++ P T+ IL+ G+
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSR 448
Query: 477 KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
G D + ++ ML G + DEI+ L L K G EA ++ E++
Sbjct: 449 IGAFHDVLSLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENV 497
Score = 129 bits (323), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 184/418 (44%), Gaps = 36/418 (8%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++M+L+ +KGL +A ++D M G++P L+S+ V+ + +
Sbjct: 157 VFDMILKVYAEKGLVKNALHVFDNMGNYGRIPSLLSCNSLLSNLVRKGENFVALHVYDQM 216
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGD 234
+V + +++ + +D A+ +E S L T+N L+ G GD
Sbjct: 217 ISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLINGYAMIGD 276
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEVDRARDLLKEVGL--------- 282
V+ + L M G S ++VTY +L+ G C+ ++E + +LLKE L
Sbjct: 277 VEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLVADQHMYGV 336
Query: 283 ------------------KSKFSPNVRSYTTV----ISGYCKLSKMKEASSLFDEMDRSG 320
+ VR+ TT+ I+GYCK ++ EA +F M+
Sbjct: 337 LMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQIFSRMNDWS 396
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
KP+ T+N+L+DG+ + G +D AL + +M P V+T+ L++GY R+G + L
Sbjct: 397 LKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKEVVPTVMTYNILLKGYSRIGAFHDVL 456
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
LW M R ++A + S L+ L K EA L + ++ N +I G
Sbjct: 457 SLWKMMLKRGVNADEISCSTLLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGL 516
Query: 441 CKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
CK V+EA I+ + +CKP T+ L G+ G +A + M G P
Sbjct: 517 CKMEKVNEAKEILDNVNIFRCKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFP 574
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/378 (24%), Positives = 162/378 (42%), Gaps = 38/378 (10%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
LL +L + G + A L++ + G L D+ L ++S +++++ +KE+L +
Sbjct: 477 LLEALFKLGDFNEAMKLWENVLARGLLTDTITLNVMISGLCKMEKVNEAKEILDNVNIFR 536
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
+ Y L K L +A + + R +N L+ G +++
Sbjct: 537 CKPAVQTYQALSHGYYKVGNLKEAFAVKEYMERKGIFPTIEMYNTLISGAFKYRHLNKVA 596
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA---------RDLLKEVGLKSKFS--- 287
+ +R+ G +P + TY L+ G C I +D+A + + V + SK +
Sbjct: 597 DLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEMIEKGITLNVNICSKIANSL 656
Query: 288 -------------PNVRSYTTVISGYCKLSKMKEASS--------LFDEMDRSGTK---- 322
+ + ++ GY L + EAS+ + + ++ S K
Sbjct: 657 FRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLV 716
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG-CPPDVVTFTSLIEGYCRVGKVNYGLD 381
PN +N I G K G ++ A ++ +L PD T+T LI G G +N
Sbjct: 717 PNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFT 776
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L EM + I ++ T++ LI LCK + A+ LL +L + I P YN +IDG
Sbjct: 777 LRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLV 836
Query: 442 KSGNVDEANAIVVEMEEK 459
KSGNV EA + +M EK
Sbjct: 837 KSGNVAEAMRLKEKMIEK 854
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 78/136 (57%), Gaps = 2/136 (1%)
Query: 221 TFNVLMGGLCSAGDVDEAFK-FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
+NV + GLC AG +++A K F + + S PD TY L+HG ++++A L E
Sbjct: 721 VYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDE 780
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ LK PN+ +Y +I G CKL + A L ++ + G PNA T+N+LIDG VK G
Sbjct: 781 MALKG-IIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSG 839
Query: 340 NMDSALGIYKKMLFHG 355
N+ A+ + +KM+ G
Sbjct: 840 NVAEAMRLKEKMIEKG 855
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 140/312 (44%), Gaps = 48/312 (15%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
+Y+ L+S K+ L+ L EL +T+ L+ G C+ G +D+A+ M
Sbjct: 578 MYNTLISGAFKYRHLNKVADLVIELRARGLTPTVATYGALITGWCNIGMIDKAYATCFEM 637
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV-----------------------GL 282
G + ++ + + + L R+ ++D A LL+++ L
Sbjct: 638 IEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIVDFDLLLPGYQSLKEFLEASATTCL 697
Query: 283 KSK--------------FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT-KPNAFT 327
K++ PN Y I+G CK K+++A LF ++ S P+ +T
Sbjct: 698 KTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLEDARKLFSDLLSSDRFIPDEYT 757
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
+ LI G G+++ A + +M G P++VT+ +LI+G C++G V+ L H++
Sbjct: 758 YTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLP 817
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
+ I+ + T++ LI L KS + EA L ++ I ++ G K G+VD
Sbjct: 818 QKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM----------IEKGLVRGSDKQGDVD 867
Query: 448 EANAIVVEMEEK 459
+V++ E K
Sbjct: 868 IPKEVVLDPEVK 879
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 109/223 (48%), Gaps = 2/223 (0%)
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH-GCPPDVVTFTSLI 367
A ++D+M P+ FT + +++ + + GN+D A+ K+ G +VVT+ SLI
Sbjct: 209 ALHVYDQMISFEVSPDVFTCSIVVNAYCRSGNVDKAMVFAKETESSLGLELNVVTYNSLI 268
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
GY +G V + M+ R +S ++ T++ LI CK ++EA + LK +V
Sbjct: 269 NGYAMIGDVEGMTRVLRLMSERGVSRNVVTYTSLIKGYCKKGLMEEAEHVFELLKEKKLV 328
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVI 486
+Y ++DGYC++G + +A + M E + + LI G+C G+ +A I
Sbjct: 329 ADQHMYGVLMDGYCRTGQIRDAVRVHDNMIEIGVRTNTTICNSLINGYCKSGQLVEAEQI 388
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
F +M PD T L ++G EA ++ + + + +
Sbjct: 389 FSRMNDWSLKPDHHTYNTLVDGYCRAGYVDEALKLCDQMCQKE 431
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 136/294 (46%), Gaps = 23/294 (7%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQ-KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR 164
E+ + + YN L+ + + L+ A L+ + +R G P G L++ + +
Sbjct: 568 ERKGIFPTIEMYNTLISGAFKYRHLNKVADLVIE-LRARGLTPTVATYGALITGWCNIGM 626
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
+D + E + +N + + + L + +K+D+A L ++++ F++
Sbjct: 627 IDKAYATCFEMIEKGITLNVNICSKIANSLFRLDKIDEACLLLQKIV---------DFDL 677
Query: 225 LMGGLCSAGDVDEA-----FKFLNGMRSFGCS-------PDIVTYNTLLHGLCRIKEVDR 272
L+ G S + EA K S S P+ + YN + GLC+ +++
Sbjct: 678 LLPGYQSLKEFLEASATTCLKTQKIAESVENSTPKKLLVPNNIVYNVAIAGLCKAGKLED 737
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
AR L ++ +F P+ +YT +I G + +A +L DEM G PN T+N+LI
Sbjct: 738 ARKLFSDLLSSDRFIPDEYTYTILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALI 797
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
G K+GN+D A + K+ G P+ +T+ +LI+G + G V + L +M
Sbjct: 798 KGLCKLGNVDRAQRLLHKLPQKGITPNAITYNTLIDGLVKSGNVAEAMRLKEKM 851
>AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:23195609-23198524 REVERSE
LENGTH=971
Length = 971
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 116/447 (25%), Positives = 209/447 (46%), Gaps = 26/447 (5%)
Query: 93 NPILGFKFFQFTREKLNVHHSF-----WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLP 147
N IL F + Q +++N++H W + L R + K + + P
Sbjct: 43 NCILQF-YSQLDSKQININHRIYSIVSWAFLNLNR------YEDAEKFINIHISKASIFP 95
Query: 148 DSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQ---VNAVVYDNLLSVLVKHNKLDDAI 204
+ +L L+ F+ + R D SK LL C + +++ + +L+ V+ ++D+AI
Sbjct: 96 RTHMLDSLIHGFS-ITRDDPSKGLLILRDCLRNHGAFPSSLTFCSLIYRFVEKGEMDNAI 154
Query: 205 CLFRELMRSHSHLETSTF--NVLMGGLCSAGDVDEAFKFLNGMRSFGC-SPDIVTYNTLL 261
+ + + + F + ++ G C G + A F G P++VTY TL+
Sbjct: 155 EVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLV 214
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
LC++ +VD RDL++ + F + Y+ I GY K + +A EM G
Sbjct: 215 SALCQLGKVDEVRDLVRRLE-DEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGM 273
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
+ +++ LIDG K GN++ ALG+ KM+ G P+++T+T++I G C++GK+
Sbjct: 274 NRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFV 333
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L++ + + I + LI +C+ L A +L +++ I P YN VI+G C
Sbjct: 334 LFNRILSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLC 393
Query: 442 KSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIV-IFYKMLATGCSPDEI 500
+G V EA+ E+ + D T++ L+ + +K + DA++ I + L D +
Sbjct: 394 MAGRVSEAD----EVSKGVVGDVITYSTLLDSY-IKVQNIDAVLEIRRRFLEAKIPMDLV 448
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHE 527
IL L G GEA + ++ E
Sbjct: 449 MCNILLKAFLLMGAYGEADALYRAMPE 475
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 179/394 (45%), Gaps = 25/394 (6%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
LVS+ + ++D ++L+ + + + V Y N + K L DA+ RE++
Sbjct: 213 LVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKG 272
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ + ++++L+ GL G+V+EA L M G P+++TY ++ GLC++ +++ A
Sbjct: 273 MNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAF 332
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L + L + Y T+I G C+ + A S+ +M++ G +P+ T+N++I+G
Sbjct: 333 VLFNRI-LSVGIEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVING 391
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
G + A + K G DV+T+++L++ Y +V ++ L++ I
Sbjct: 392 LCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPMD 446
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
L ++L+ EA L R + D+ P + Y +I GYCK+G ++EA +
Sbjct: 447 LVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFN 506
Query: 455 EMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
E+ + + +I C KG A + ++ G D T R L
Sbjct: 507 ELRKSSVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTL--------- 557
Query: 515 PGEAARIKESLHENQGDS--LKKSY-YEGTNSDV 545
S+H N GD L Y E NSDV
Sbjct: 558 -------LHSIHANGGDKGILGLVYGLEQLNSDV 584
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 131/263 (49%), Gaps = 20/263 (7%)
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEVD 271
S ++ + +++ GLC G + +A + +S G + + +TYN+L++GLC+ + E
Sbjct: 651 SSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEAL 710
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
R D L+ +GL P+ +Y +I CK +A L D M G PN +NS+
Sbjct: 711 RLFDSLENIGL----VPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSI 766
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+DG+ K+G + A+ + + + PD T +S+I+GYC+ G + L ++ E +NI
Sbjct: 767 VDGYCKLGQTEDAMRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNI 826
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQL----------KRTD--IVPQPSIYNHVIDG 439
SA F LI C R++EAR LLR++ R D + SI +++
Sbjct: 827 SADFFGFLFLIKGFCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVE- 885
Query: 440 YCKSGNVDEANAIVVEMEEKCKP 462
C+ G V +A I+ E+ P
Sbjct: 886 LCEQGRVPQAIKILDEISSTIYP 908
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/397 (24%), Positives = 167/397 (42%), Gaps = 34/397 (8%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N+LL++ G + A LY M PD+ ++ + +++ + E+ E +
Sbjct: 451 NILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
+ V AV Y+ ++ L K LD A + EL +L+ T L+ + + G
Sbjct: 511 SSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKG 569
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARD---LLKEVGLKSKFSP------ 288
+ G+ + N + LC+ + A + +++ GL F
Sbjct: 570 ILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTL 629
Query: 289 --NVRS---YTTVI-SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
N+RS Y V+ +G LS M + + +I+G K G +
Sbjct: 630 VDNLRSLDAYLLVVNAGETTLSSM-----------------DVIDYTIIINGLCKEGFLV 672
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
AL + G + +T+ SLI G C+ G + L L+ + + S T+ +LI
Sbjct: 673 KALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILI 732
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV-EMEEKCK 461
LCK +A LL + +VP IYN ++DGYCK G ++A +V +M +
Sbjct: 733 DNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMGRVT 792
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
PD FT + +I G+C KG +A+ +F + S D
Sbjct: 793 PDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISAD 829
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 195/492 (39%), Gaps = 64/492 (13%)
Query: 13 TLSLFTRIQASKIALARCFTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVL 72
L +F ++ S ++ A C+ ++ A C KG + ++ L L
Sbjct: 501 ALEMFNELRKSSVSAAVCYN--RIIDALCKKGMLDTATEVLIE------LWEKGL----- 547
Query: 73 SYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSS 132
Y H + +L+ + N G + E+LN N + LC++G +
Sbjct: 548 -YLDIHTSRTLLHSI--HANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEA 604
Query: 133 AKLLYDCMRFDG---KLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDN 189
A +Y MR G P S +L LV + LD ++ + ++ + Y
Sbjct: 605 AIEVYMIMRRKGLTVTFP-STILKTLVDNLR---SLDAYLLVVNAGETTLSSMDVIDYTI 660
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
+++ L K L A+ L L T T+N L+ GLC G + EA + + + + G
Sbjct: 661 IINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIG 720
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
P VTY L+ LC+ A LL + + PN+ Y +++ GYCKL + ++A
Sbjct: 721 LVPSEVTYGILIDNLCKEGLFLDAEKLLDSM-VSKGLVPNIIIYNSIVDGYCKLGQTEDA 779
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
+ P+AFT +S+I G+ K G+M+ AL ++ + D F LI+G
Sbjct: 780 MRVVSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKG 839
Query: 370 YCRVGKVNYGLDLWHEMNT--------RNISASL---HTFSVLISYLCKSNRLQEARDLL 418
+C G++ L EM + A L + + LC+ R+ +A +L
Sbjct: 840 FCTKGRMEEARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKIL 899
Query: 419 ----------------------------RQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
++K+ D V + + C SG +++AN
Sbjct: 900 DEISSTIYPSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQAN 959
Query: 451 AIVVEMEEKCKP 462
V+ + C P
Sbjct: 960 EFVMSV-LSCMP 970
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 186/454 (40%), Gaps = 48/454 (10%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E+ + S TYN ++ LC G S A + G + D L+ S+ V +
Sbjct: 374 EQRGIQPSILTYNTVINGLCMAGRVSEADEVSK-----GVVGDVITYSTLLDSYIKVQNI 428
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
D E+ K+ ++ V+ + LL + +A L+R + +T+T+ +
Sbjct: 429 DAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATM 488
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G C G ++EA + N +R S V YN ++ LC+ +D A ++L E+ K
Sbjct: 489 IKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIELWEKGL 547
Query: 286 FSPNVRSYTTVISGY----------------------------------CKLSKMKEASS 311
+ S T + S + CK + A
Sbjct: 548 YLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIE 607
Query: 312 LFDEMDRSG---TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
++ M R G T P+ +L+D + ++D+ L + DV+ +T +I
Sbjct: 608 VYMIMRRKGLTVTFPSTI-LKTLVD---NLRSLDAYLLVVNAGETTLSSMDVIDYTIIIN 663
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
G C+ G + L+L +R ++ + T++ LI+ LC+ L EA L L+ +VP
Sbjct: 664 GLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVP 723
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIF 487
Y +ID CK G +A ++ M K P+ + ++ G+C G+ DA+ +
Sbjct: 724 SEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVV 783
Query: 488 YKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ + +PD TV + K G EA +
Sbjct: 784 SRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV 817
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 124/572 (21%), Positives = 215/572 (37%), Gaps = 139/572 (24%)
Query: 90 RLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLL----------YDC 139
++ P L FF+ + + + TY L+ +LCQ G + L +DC
Sbjct: 183 KIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDC 242
Query: 140 MRF--------------DGKLPDSRLL--GF---LVSSFALVDRLDVSKE--------LL 172
+ + D + D ++ G +VS L+D L SKE LL
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGL--SKEGNVEEALGLL 300
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ V+ N + Y ++ L K KL++A LF ++ ++ + L+ G+C
Sbjct: 301 GKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRK 360
Query: 233 GDVDEAFKFLNGMRSFGCSP------------------------------DIVTYNTLLH 262
G+++ AF L M G P D++TY+TLL
Sbjct: 361 GNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSKGVVGDVITYSTLLD 420
Query: 263 GLCRIKEVDRARD-------------------LLKEVGLKSKF---------------SP 288
+++ +D + LLK L + +P
Sbjct: 421 SYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTP 480
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
+ +Y T+I GYCK +++EA +F+E+ +S A +N +ID K G +D+A +
Sbjct: 481 DTATYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVL 539
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
++ G D+ T +L+ G L L + + N L + I LCK
Sbjct: 540 IELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKR 599
Query: 409 NRLQEARDLLRQLKRTDI-VPQPSI---------------------------------YN 434
+ A ++ ++R + V PS Y
Sbjct: 600 GSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYT 659
Query: 435 HVIDGYCKSGNVDEA-NAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
+I+G CK G + +A N + T+ LI G C +G +A+ +F +
Sbjct: 660 IIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENI 719
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
G P E+T IL L K G+ +A ++ +S+
Sbjct: 720 GLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 182/398 (45%), Gaps = 11/398 (2%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
+L V+ R N L + F TR + V YN ++ + G S A+ L D MR
Sbjct: 197 ILGVLGRWNQESLAVEIF--TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQR 254
Query: 144 GKLPD----SRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
G +PD + L+ + S L L V ELL + + ++ +A+ Y+ LLS + +
Sbjct: 255 GCVPDLISFNTLINARLKSGGLTPNLAV--ELLDMVRNSGLRPDAITYNTLLSACSRDSN 312
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
LD A+ +F ++ + T+N ++ G EA + + G PD VTYN+
Sbjct: 313 LDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR- 318
LL+ R + ++ +++ +++ K F + +Y T+I Y K ++ A L+ +M
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQ-KMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGL 431
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
SG P+A T+ LID K A + +ML G P + T+++LI GY + GK
Sbjct: 432 SGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREE 491
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
D + M +SV++ L + N ++A L R + P ++Y +I
Sbjct: 492 AEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMIL 551
Query: 439 GYCKSGNVDEANAIVVEMEEKCKPDKFTF-TILIAGHC 475
G K D+ + +MEE C + ++L+ G C
Sbjct: 552 GLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC 589
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 152/340 (44%), Gaps = 41/340 (12%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL--ETSTFNVLMGGLCSAGDVDEAFK 240
NA + +L VL + N+ A+ +F R+ + +N +MG +G +A +
Sbjct: 190 NARMVAAILGVLGRWNQESLAVEIF---TRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQE 246
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
++ MR GC PD++++NTL++ AR LK GL +PN+
Sbjct: 247 LVDAMRQRGCVPDLISFNTLIN----------AR--LKSGGL----TPNL---------- 280
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
A L D + SG +P+A T+N+L+ + N+D A+ +++ M H C PD+
Sbjct: 281 --------AVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDL 332
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
T+ ++I Y R G L+ E+ + T++ L+ + ++ +++ +Q
Sbjct: 333 WTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQ 392
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME--EKCKPDKFTFTILIAGHCMKG 478
+++ YN +I Y K G +D A + +M+ PD T+T+LI
Sbjct: 393 MQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKAN 452
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
R +A + +ML G P T L K+G EA
Sbjct: 453 RTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/333 (21%), Positives = 136/333 (40%), Gaps = 35/333 (10%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
+Y +++ K A + L +S + T+N LM G + A N M
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 246 RSFGCSPDIVTYNTLLHGLC---RIKEVDRARDLLKEVGLK------------------- 283
G SP + + N LLH LC R++E+ + L+++G K
Sbjct: 814 MRDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNI 873
Query: 284 ------------SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
+ + P +R Y +I CK ++++A + EM+ + K +NS+
Sbjct: 874 FEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSM 933
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+ + + + + +Y+++ G PD T+ +LI YCR + G L +M +
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
L T+ LIS K L++A L +L + S Y+ ++ SG+ +A
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 452 IVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDA 483
++ M+ +P T +L+ + G +A
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEA 1086
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/361 (21%), Positives = 161/361 (44%), Gaps = 10/361 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+ + Q G + A+ +++ M DG P + L+ + + RL+ ++ E
Sbjct: 789 TWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL 848
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET-STFNVLMGGLCSAGD 234
Q +++ +L + + + ++ M++ +L T + +++ LC
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNIFEVKKIYSS-MKAAGYLPTIRLYRMMIELLCKGKR 907
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVR 291
V +A ++ M ++ +N++L I++ + + +KE GL+ P+
Sbjct: 908 VRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLE----PDET 963
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y T+I YC+ + +E L +M G P T+ SLI F K ++ A +++++
Sbjct: 964 TYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL 1023
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
L G D + ++++ G + L M I +L T +L+ S
Sbjct: 1024 LSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNP 1083
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTIL 470
QEA +L LK T++ Y+ VID Y +S + + ++EM +E +PD +T
Sbjct: 1084 QEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCF 1143
Query: 471 I 471
+
Sbjct: 1144 V 1144
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/383 (18%), Positives = 163/383 (42%), Gaps = 2/383 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y ++ + ++ L A+ + +R G+ PD + L+S++A + ++ +
Sbjct: 755 YTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMM 814
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + LL L +L++ + EL + S+ +++ AG++
Sbjct: 815 RDGPSPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIF 874
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
E K + M++ G P I Y ++ LC+ K V A ++ E+ ++ F + + ++
Sbjct: 875 EVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME-EANFKVELAIWNSM 933
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
+ Y + K+ ++ + +G +P+ T+N+LI + + + + ++M G
Sbjct: 934 LKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGL 993
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P + T+ SLI + + + L+ E+ ++ + + ++ S +A
Sbjct: 994 DPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEK 1053
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHC 475
LL+ +K I P + + ++ Y SGN EA ++ +++ + + ++ +I +
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 476 MKGRAPDAIVIFYKMLATGCSPD 498
I +M G PD
Sbjct: 1114 RSKDYNSGIERLLEMKKEGLEPD 1136
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/338 (20%), Positives = 133/338 (39%), Gaps = 37/338 (10%)
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + + +R GC +++ C++ + A ++ + K YT +
Sbjct: 699 EASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDI 758
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I Y K ++A S+ + +SG P+ T+NSL+ + + G + A I+ M+ G
Sbjct: 759 IEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGP 818
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P V + L+ C G++ + E+ S + +++ ++ + E +
Sbjct: 819 SPTVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKK 878
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK----------------- 459
+ +K +P +Y +I+ CK V +A +V EMEE
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYT 938
Query: 460 -------------------CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
+PD+ T+ LI +C R + ++ +M G P
Sbjct: 939 AIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLD 998
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
T + L S K +A ++ E L ++G L +S+Y
Sbjct: 999 TYKSLISAFGKQKCLEQAEQLFEELL-SKGLKLDRSFY 1035
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/340 (18%), Positives = 137/340 (40%), Gaps = 8/340 (2%)
Query: 119 MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCN 178
++L + + G K +Y M+ G LP RL ++ R+ ++ +++E +
Sbjct: 862 LMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEA 921
Query: 179 KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEA 238
+V +++++L + + +++ + + + +T+N L+ C +E
Sbjct: 922 NFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEG 981
Query: 239 FKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS 298
+ + MR+ G P + TY +L+ + K +++A L +E+ L + Y T++
Sbjct: 982 YLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEEL-LSKGLKLDRSFYHTMMK 1040
Query: 299 GYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP 358
+A L M +G +P T + L+ + GN A + +
Sbjct: 1041 ISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVEL 1100
Query: 359 DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLL 418
+ ++S+I+ Y R N G++ EM + ++ + S E LL
Sbjct: 1101 TTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLL 1160
Query: 419 RQLKRTD-------IVPQPSIYNHVIDGYCKSGNVDEANA 451
+ L+ + +P + +DG+ + E NA
Sbjct: 1161 KALEDIGFDLPIRLLAGRPELLVSEVDGWFEKLKSIEDNA 1200
>AT4G20740.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:11126151-11128334 FORWARD
LENGTH=727
Length = 727
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/455 (23%), Positives = 197/455 (43%), Gaps = 9/455 (1%)
Query: 77 KHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLL 136
+ +TPS+V EV+K N+ + KFF + ++ H F YN L + G +A L
Sbjct: 121 RRVTPSIVAEVLKLGNDAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQL 180
Query: 137 YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
+ M G+ P + L+ A R + + + + +Y+ ++ LVK
Sbjct: 181 PELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALVK 240
Query: 197 HNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVT 256
+ D A+ ++ + E++TF +L+ GLC AG ++E + L MR C PD+
Sbjct: 241 NGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFA 300
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
Y ++ L +D + + E+ + + P+V +Y T++ G CK +++ LF EM
Sbjct: 301 YTAMIKTLVSEGNLDASLRVWDEM-RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEM 359
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
+ + LI+GFV G + SA +++ ++ G D+ + ++I+G C V +V
Sbjct: 360 KGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQV 419
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ L+ + T S ++ NRL + ++L ++ P
Sbjct: 420 DKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVLERIGELG-YPVSDYLTQF 478
Query: 437 IDGYCKSGNVDEANAIVVE----MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
C +E NA+ ++ ++ K + IL+ G ++ +FY+M
Sbjct: 479 FKLLCAD---EEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMGDIQKSLSLFYEMRK 535
Query: 493 TGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
G PD + I C ++ G A E + E
Sbjct: 536 LGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIE 570
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 176/396 (44%), Gaps = 35/396 (8%)
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
+ Q RE L + Y ++++L +G ++ ++D MR D PD G LV
Sbjct: 283 LEILQRMRENL-CKPDVFAYTAMIKTLVSEGNLDASLRVWDEMRRDEIKPDVMAYGTLVV 341
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
R++ EL E + ++ ++ +Y L+ V K+ A L+ +L+ S
Sbjct: 342 GLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKVRSACNLWEDLVDSGYIA 401
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ +N ++ GLCS VD+A+K PD T + ++ + + ++L
Sbjct: 402 DIGIYNAVIKGLCSVNQVDKAYKLFQVAIEEELEPDFETLSPIMVAYVVMNRLSDFSNVL 461
Query: 278 KEVG---------------------------------LKSKFSPNVRSYTTVISGYCKLS 304
+ +G LK+K +V Y ++ K+
Sbjct: 462 ERIGELGYPVSDYLTQFFKLLCADEEKNAMALDVFYILKTKGHGSVSVYNILMEALYKMG 521
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
++++ SLF EM + G +P++ +++ I FV+ G++ +A ++K++ C P + +
Sbjct: 522 DIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEKGDVKAACSFHEKIIEMSCVPSIAAYL 581
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLH-TFSVLISYLCKSNRLQEARDLLRQLKR 423
SL +G C++G+++ + L E S + +++ + ++CK + ++ ++ ++ +
Sbjct: 582 SLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFKYALTVCHVCKGSNAEKVMKVVDEMNQ 641
Query: 424 TDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+ IY +I G K G + A + E++++
Sbjct: 642 EGVFINEVIYCAIISGMSKHGTIKVAREVFTELKKR 677
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 82/408 (20%), Positives = 171/408 (41%), Gaps = 23/408 (5%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ +L++ LC+ G + MR + PD ++ + LD S + E
Sbjct: 265 TFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVFAYTAMIKTLVSEGNLDASLRVWDEM 324
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++++ + + Y L+ L K +++ LF E+ ++ + VL+ G + G V
Sbjct: 325 RRDEIKPDVMAYGTLVVGLCKDGRVERGYELFMEMKGKQILIDREIYRVLIEGFVADGKV 384
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
A + G DI YN ++ GLC + +VD+A L +V ++ + P+ + +
Sbjct: 385 RSACNLWEDLVDSGYIADIGIYNAVIKGLCSVNQVDKAYKLF-QVAIEEELEPDFETLSP 443
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS-----ALGIYK- 349
++ Y ++++ + S++ + + G + + + F K+ D AL ++
Sbjct: 444 IMVAYVVMNRLSDFSNVLERIGELG-----YPVSDYLTQFFKLLCADEEKNAMALDVFYI 498
Query: 350 -KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
K HG V + L+E ++G + L L++EM ++S+ I +
Sbjct: 499 LKTKGHG---SVSVYNILMEALYKMGDIQKSLSLFYEMRKLGFEPDSSSYSIAICCFVEK 555
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM--EEKCKPDKFT 466
++ A ++ VP + Y + G C+ G +D +V E + P +F
Sbjct: 556 GDVKAACSFHEKIIEMSCVPSIAAYLSLTKGLCQIGEIDAVMLLVRECLGNVESGPMEFK 615
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
+ + + C A + + +M G +E+ C + SGM
Sbjct: 616 YALTVCHVCKGSNAEKVMKVVDEMNQEGVFINEVIY-----CAIISGM 658
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 15/209 (7%)
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFH------GCPPDVVTFTSLIEGYC--RVGKVNYGLD 381
S++ +K+GN D+A+ FH G D + + YC R G
Sbjct: 126 SIVAEVLKLGN-DAAVA---AKFFHWAGKQKGYKHDFAAYNAF--AYCLNRNGHFRAADQ 179
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L M+++ S F +LI + R + ++K+ P+ +YN ++D
Sbjct: 180 LPELMDSQGRPPSEKQFEILIRMHADNRRGLRVYYVYEKMKKFGFKPRVFLYNRIMDALV 239
Query: 442 KSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
K+G D A A+ + E+ + TF IL+ G C GR + + I +M C PD
Sbjct: 240 KNGYFDLALAVYEDFKEDGLVEESTTFMILVKGLCKAGRIEEMLEILQRMRENLCKPDVF 299
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQ 529
+ L+ G + R+ + + ++
Sbjct: 300 AYTAMIKTLVSEGNLDASLRVWDEMRRDE 328
>AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26805651-26807183 REVERSE
LENGTH=510
Length = 510
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 112/443 (25%), Positives = 197/443 (44%), Gaps = 54/443 (12%)
Query: 79 LTPSLVLEVVKRLNNP-ILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLY 137
L+P+L+ EV+K+L+N +L F++ + H+ YN L+ SL
Sbjct: 92 LSPALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESL------------- 138
Query: 138 DCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKH 197
GK+ +L+ ++LVD + K L E + + +
Sbjct: 139 ------GKIKQFKLI------WSLVDDMKAKKLLSKE-----------TFALISRRYARA 175
Query: 198 NKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTY 257
K+ +AI F ++ +E+S FN ++ L + +V +A K + M+ PDI +Y
Sbjct: 176 RKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSY 235
Query: 258 NTLLHG------LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
LL G L R+ EV+R +K+ G F P+V +Y +I+ +CK K +EA
Sbjct: 236 TILLEGWGQELNLLRVDEVNRE---MKDEG----FEPDVVAYGIIINAHCKAKKYEEAIR 288
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
F+EM++ KP+ F SLI+G ++ AL +++ G P + T+ +L+ YC
Sbjct: 289 FFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYC 348
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
++ EM + + + T+ +++ +L + R +EA ++ + + P S
Sbjct: 349 WSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SCEPTVS 405
Query: 432 IYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
Y ++ +C +D A I EM+ K P F+ LI C + + +A F +M
Sbjct: 406 TYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEM 465
Query: 491 LATGCSPDEITVRILSSCLLKSG 513
L G P L LL G
Sbjct: 466 LDVGIRPPGHMFSRLKQTLLDEG 488
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 140/314 (44%), Gaps = 7/314 (2%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N +L +L + A+ ++D M+ PD + L+ + L E+ E +
Sbjct: 200 FNRMLDTLSKSRNVGDAQKVFDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMK 259
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + V Y +++ K K ++AI F E+ + + F L+ GL S ++
Sbjct: 260 DEGFEPDVVAYGIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLN 319
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
+A +F +S G + TYN L+ C + ++ A + E+ LK PN R+Y +
Sbjct: 320 DALEFFERSKSSGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKG-VGPNARTYDII 378
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
+ ++ + KEA ++ M +P T+ ++ F +D A+ I+ +M G
Sbjct: 379 LHHLIRMQRSKEAYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGV 435
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P + F+SLI C K++ + ++EM I H FS L L R + D
Sbjct: 436 LPGMHMFSSLITALCHENKLDEACEYFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTD 495
Query: 417 L---LRQLKRTDIV 427
L + +L++T +V
Sbjct: 496 LVVKMDRLRKTQLV 509
>AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:13490251-13491458 FORWARD
LENGTH=369
Length = 369
Score = 141 bits (355), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 173/340 (50%), Gaps = 2/340 (0%)
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
++ + V +L++ N + DA+ + ++ + + +L+ LC V A
Sbjct: 9 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 68
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ L M+ G SP++VTY++L+ GLC+ + A L E+ K K +PNV +++ +I
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSK-KINPNVITFSALIDA 127
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
Y K K+ + S++ M + PN FT++SLI G +D A+ + M+ GC P+
Sbjct: 128 YAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPN 187
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VVT+++L G+ + +V+ G+ L +M R ++A+ + + LI ++ ++ A +
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKG 478
+ ++P YN V+ G +G V++A + M++ + D T+TI+I G C
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+A +FYK+ PD I+ + L ++GM EA
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 347
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 154/329 (46%), Gaps = 1/329 (0%)
Query: 91 LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSR 150
L+N I + EK+ + +L+ +LC+ L A + M+ G P+
Sbjct: 25 LSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVV 84
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
L++ RL ++ L E K+ N + + L+ K KL +++ +
Sbjct: 85 TYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMM 144
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
++ T++ L+ GLC VDEA K L+ M S GC+P++VTY+TL +G + V
Sbjct: 145 IQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRV 204
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D LL ++ + + N S T+I GY + K+ A +F M +G PN ++N
Sbjct: 205 DDGIKLLDDMPQRG-VAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNI 263
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
++ G G ++ AL ++ M D++T+T +I G C+ V DL++++ +
Sbjct: 264 VLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKR 323
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLR 419
+ ++++I+ L ++ EA L R
Sbjct: 324 VEPDFKAYTIMIAELNRAGMRTEADALNR 352
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 141/283 (49%), Gaps = 1/283 (0%)
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
E+L + + N V Y +L++ L K +L DA E+ + TF+ L+
Sbjct: 69 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 128
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
G + + M P++ TY++L++GLC VD A +L ++ + +PN
Sbjct: 129 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKML-DLMISKGCTPN 187
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V +Y+T+ +G+ K S++ + L D+M + G N + N+LI G+ + G +D ALG++
Sbjct: 188 VVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFG 247
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
M +G P++ ++ ++ G G+V L + M + T++++I +CK+
Sbjct: 248 YMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKAC 307
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
++EA DL +LK + P Y +I ++G EA+A+
Sbjct: 308 MVKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEADAL 350
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 140/309 (45%), Gaps = 35/309 (11%)
Query: 245 MRSFGCSPDIVTYNTLLHGLC---RIKEVDRARDLLKEVGLKSK---------------- 285
M G PDIVT ++L++G C IK+ ++++G+K
Sbjct: 4 MMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRL 63
Query: 286 ---------------FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
SPNV +Y+++I+G CK ++ +A EMD PN TF++
Sbjct: 64 VVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSA 123
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
LID + K G + +YK M+ P+V T++SLI G C +V+ + + M ++
Sbjct: 124 LIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKG 183
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
+ ++ T+S L + KS+R+ + LL + + + N +I GY ++G +D A
Sbjct: 184 CTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLAL 243
Query: 451 AIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
+ M P+ ++ I++AG G A+ F M T D IT I+ +
Sbjct: 244 GVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGM 303
Query: 510 LKSGMPGEA 518
K+ M EA
Sbjct: 304 CKACMVKEA 312
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 123/243 (50%), Gaps = 8/243 (3%)
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
+M + G +P+ T +SL++GF ++ A+ + +M G DVV T LI+ C+
Sbjct: 3 KMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNR 62
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
V L++ M R IS ++ T+S LI+ LCKS RL +A L ++ I P ++
Sbjct: 63 LVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFS 122
Query: 435 HVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
+ID Y K G + + +++ M + P+ FT++ LI G CM R +AI + M++
Sbjct: 123 ALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISK 182
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN-------QGDSLKKSYYEGTNSDVP 546
GC+P+ +T L++ KS + ++ + + + ++L K Y++ D+
Sbjct: 183 GCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLA 242
Query: 547 FSV 549
V
Sbjct: 243 LGV 245
>AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587298-23588220 FORWARD
LENGTH=257
Length = 257
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 132/247 (53%), Gaps = 1/247 (0%)
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD 271
+SH + ++ LC G+ A M G P+++TYN ++ C
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
A LL+ + ++ + +P++ +++ +I+ + K K+ EA ++ EM R P T+NS+
Sbjct: 63 DADQLLRHM-IEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSM 121
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
IDGF K +D A + M GC PDVVTF++LI GYC+ +V+ G++++ EM+ R I
Sbjct: 122 IDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGI 181
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
A+ T++ LI C+ L A+DLL ++ + P ++ ++ G C + +A A
Sbjct: 182 VANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFA 241
Query: 452 IVVEMEE 458
I+ ++++
Sbjct: 242 ILEDLQK 248
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 132/246 (53%), Gaps = 1/246 (0%)
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
++ + V+ ++ L K +A LF E+ T+N ++ C +G +A
Sbjct: 6 IKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDAD 65
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ L M +PDIVT++ L++ + ++V A ++ KE+ L+ P +Y ++I G
Sbjct: 66 QLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEM-LRWSIFPTTITYNSMIDG 124
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+CK ++ +A + D M G P+ TF++LI+G+ K +D+ + I+ +M G +
Sbjct: 125 FCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVAN 184
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VT+T+LI G+C+VG ++ DL +EM + ++ TF +++ LC L++A +L
Sbjct: 185 TVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILE 244
Query: 420 QLKRTD 425
L++++
Sbjct: 245 DLQKSE 250
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 120/232 (51%), Gaps = 1/232 (0%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
++ LC+ G H +A+ L+ M G P+ ++ SF R + +LL +
Sbjct: 16 IVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWSDADQLLRHMIEKQ 75
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
+ + V + L++ VK K+ +A +++E++R T T+N ++ G C VD+A
Sbjct: 76 INPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAK 135
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ L+ M S GCSPD+VT++TL++G C+ K VD ++ E+ + N +YTT+I G
Sbjct: 136 RMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG-IVANTVTYTTLIHG 194
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+C++ + A L +EM G P+ TF+ ++ G + A I + +
Sbjct: 195 FCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 121/253 (47%), Gaps = 1/253 (0%)
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+S +V T ++ CK A +LF EM G PN T+N +ID F G
Sbjct: 3 QSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGRWS 62
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A + + M+ PD+VTF++LI + + KV+ +++ EM +I + T++ +I
Sbjct: 63 DADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMI 122
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CK 461
CK +R+ +A+ +L + P ++ +I+GYCK+ VD I EM +
Sbjct: 123 DGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIV 182
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ T+T LI G C G A + +M++ G +PD IT + + L +A I
Sbjct: 183 ANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAI 242
Query: 522 KESLHENQGDSLK 534
E L +++ L+
Sbjct: 243 LEDLQKSEDHHLE 255
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 1/191 (0%)
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
M +S K + +++D K GN +A ++ +M G P+V+T+ +I+ +C G+
Sbjct: 1 MGQSHIKADVVISTAIVDRLCKDGNHINAQNLFTEMHEKGIFPNVLTYNCMIDSFCHSGR 60
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
+ L M + I+ + TFS LI+ K ++ EA ++ +++ R I P YN
Sbjct: 61 WSDADQLLRHMIEKQINPDIVTFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNS 120
Query: 436 VIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+IDG+CK VD+A ++ M K C PD TF+ LI G+C R + + IF +M G
Sbjct: 121 MIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRG 180
Query: 495 CSPDEITVRIL 505
+ +T L
Sbjct: 181 IVANTVTYTTL 191
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T++ L+ + ++ S A+ +Y M P + ++ F DR+D +K +L
Sbjct: 82 TFSALINAFVKERKVSEAEEIYKEMLRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSM 141
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V + L++ K ++D+ + +F E+ R T T+ L+ G C GD+
Sbjct: 142 ASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDL 201
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
D A LN M S G +PD +T++ +L GLC KE+ +A +L+++
Sbjct: 202 DAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKELRKAFAILEDL 246
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN ++ C++ AK + D M G PD L++ + R+D E+ E
Sbjct: 117 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 176
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N V Y L+ + LD A L E++ + TF+ ++ GLCS ++
Sbjct: 177 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 236
Query: 236 DEAFKFLNGMR 246
+AF L ++
Sbjct: 237 RKAFAILEDLQ 247
>AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7029701-7031314 FORWARD
LENGTH=537
Length = 537
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 144/287 (50%), Gaps = 5/287 (1%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
Y+ ++ + K + D A L +LM+S + + TF +L+ AG EA N M
Sbjct: 154 YNEMIDLSGKVRQFDLAWHLI-DLMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRM 212
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
+GC PD + ++ ++ L R + A+ LK +F P+V YT ++ G+C+ +
Sbjct: 213 EDYGCVPDKIAFSIVISNLSRKRRASEAQSFFD--SLKDRFEPDVIVYTNLVRGWCRAGE 270
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ EA +F EM +G +PN +T++ +ID + G + A ++ ML GC P+ +TF +
Sbjct: 271 ISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNN 330
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
L+ + + G+ L ++++M T++ LI C+ L+ A +L + +
Sbjct: 331 LMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKK 390
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTILI 471
S +N + K +V+ A+ + + ME KC+P+ T+ IL+
Sbjct: 391 CEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILM 437
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 170/355 (47%), Gaps = 9/355 (2%)
Query: 109 NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
NV S T+ +L+R + GL S A ++ M G +PD ++S+ + R +
Sbjct: 181 NVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEA 240
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+ + ++ + + +VY NL+ + ++ +A +F+E+ + T+++++
Sbjct: 241 QSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDA 299
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH---GLCRIKEVDRARDLLKEVGLKSK 285
LC G + A M GC+P+ +T+N L+ R ++V + + +K++G +
Sbjct: 300 LCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCE-- 357
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
P+ +Y +I +C+ ++ A + + M + + NA TFN++ K +++ A
Sbjct: 358 --PDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAH 415
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+Y KM+ C P+ VT+ L+ + + L + EM+ + + +++T+ +L++
Sbjct: 416 RMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMF 475
Query: 406 CKSNRLQEARDLLRQLKRTD-IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
C A L +++ + P S+Y V+ ++G + + +V +M +K
Sbjct: 476 CGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQK 530
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 155/315 (49%), Gaps = 3/315 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+++++ +L +K S A+ +D ++ D PD + LV + + ++++ E +
Sbjct: 224 FSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMK 282
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
++ N Y ++ L + ++ A +F +++ S TFN LM AG +
Sbjct: 283 LAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTE 342
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
+ + N M+ GC PD +TYN L+ CR + ++ A +L + +K K N ++ T+
Sbjct: 343 KVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM-IKKKCEVNASTFNTI 401
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
K + A ++ +M + +PN T+N L+ FV + D L + K+M
Sbjct: 402 FRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEV 461
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEM-NTRNISASLHTFSVLISYLCKSNRLQEAR 415
P+V T+ L+ +C +G N L+ EM + ++ SL + ++++ L ++ +L++
Sbjct: 462 EPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHE 521
Query: 416 DLLRQLKRTDIVPQP 430
+L+ ++ + +V +P
Sbjct: 522 ELVEKMIQKGLVARP 536
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 93/205 (45%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N L+R + G +Y+ M+ G PD+ FL+ + + L+ + ++L
Sbjct: 327 TFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTM 386
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
K +VNA ++ + + K ++ A ++ ++M + T T+N+LM +
Sbjct: 387 IKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKST 446
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D K M P++ TY L+ C + + A L KE+ + +P++ Y
Sbjct: 447 DMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEM 506
Query: 296 VISGYCKLSKMKEASSLFDEMDRSG 320
V++ + ++K+ L ++M + G
Sbjct: 507 VLAQLRRAGQLKKHEELVEKMIQKG 531
>AT3G62540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23133514-23135313 REVERSE
LENGTH=599
Length = 599
Score = 137 bits (344), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 192/426 (45%), Gaps = 8/426 (1%)
Query: 37 TYASCDKGSITKPEAWFV-KIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPI 95
T SC + S E V K++ LF +++ VL L+ L++EV++R +
Sbjct: 117 TGVSCVESSTNPEEVERVCKVIDELFALDRNMEA-VLDEMKLDLSHDLIVEVLERFRHAR 175
Query: 96 L-GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF 154
F+FF + E+ H+ TYN ++ L + + + + M G L
Sbjct: 176 KPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTI 234
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
+ +FA + + + K ++ + LL L + +A LF +L
Sbjct: 235 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF 294
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ T+ VL+ G C ++ EA + N M G PDIV +N +L GL R + A
Sbjct: 295 TP-NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 353
Query: 275 DLLKEVGLKSKFS-PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
L +KSK PNVRSYT +I +CK S M+ A FD+M SG +P+A + LI
Sbjct: 354 KLFH--VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
GF +D+ + K+M G PPD T+ +LI+ +G ++++M I
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
S+HTF++++ + + R + ++ + I P + Y +I G G EA +
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 454 VEMEEK 459
EM +K
Sbjct: 532 EEMLDK 537
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 158/341 (46%), Gaps = 4/341 (1%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
Y++++S+L K + + + + E M + L TF + M +A + +A M
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEE-MGTKGLLTMETFTIAMKAFAAAKERKKAVGIFELM 255
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
+ + + T N LL L R K A+ L + LK +F+PN+ +YT +++G+C++
Sbjct: 256 KKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK--LKERFTPNMMTYTVLLNGWCRVRN 313
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ EA+ ++++M G KP+ N +++G ++ A+ ++ M G P+V ++T
Sbjct: 314 LIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTI 373
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
+I +C+ + ++ + +M + ++ LI+ +L +LL++++
Sbjct: 374 MIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKG 433
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAI 484
P YN +I + I +M + + +P TF +++ + +
Sbjct: 434 HPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGR 493
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
++ +M+ G PD+ + +L L+ G EA R E +
Sbjct: 494 AVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 534
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 134/304 (44%), Gaps = 15/304 (4%)
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
TYN+++ L + ++ + +L+E+G K + + ++T + + + K+A +F+
Sbjct: 197 TYNSMMSILAKTRQFETMVSVLEEMGTKGLLT--METFTIAMKAFAAAKERKKAVGIFEL 254
Query: 316 MDRSGTKPNAFTFNSLID--GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
M + K T N L+D G K+G L K F P+++T+T L+ G+CRV
Sbjct: 255 MKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF---TPNMMTYTVLLNGWCRV 311
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
+ +W++M + + +V++ L +S + +A L +K P Y
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 434 NHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
+I +CK +++ A +M + +PD +T LI G + + + +M
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 493 TGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDS-------LKKSYYEGTNSDV 545
G PD T L + MP RI + +N+ + + KSY+ N ++
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEM 491
Query: 546 PFSV 549
+V
Sbjct: 492 GRAV 495
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 1/240 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N++L L + S A L+ M+ G P+ R ++ F ++ + E +
Sbjct: 335 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ +Q +A VY L++ KLD L +E+ + T+N L+ + +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ + N M P I T+N ++ + + R + E+ +K P+ SYT
Sbjct: 455 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM-IKKGICPDDNSYTV 513
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G K +EA +EM G K +N F + G + + ++ F G
Sbjct: 514 LIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 120/294 (40%), Gaps = 35/294 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T N LL SL + L A++L+D ++ + P+ L++ + V L + + +
Sbjct: 266 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 324
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ + V ++ +L L++ K DAI LF + ++ +++ C +
Sbjct: 325 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 384
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG-------------- 281
+ A ++ + M G PD Y L+ G K++D +LLKE+
Sbjct: 385 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 444
Query: 282 --------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
++++ P++ ++ ++ Y + +++DEM + G
Sbjct: 445 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 504
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
P+ ++ LI G + G A ++ML G ++ + + R G+
Sbjct: 505 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:679487-681904 FORWARD
LENGTH=805
Length = 805
Score = 136 bits (343), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 212/457 (46%), Gaps = 28/457 (6%)
Query: 49 PEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLN-NPILGFKFFQFTRE- 106
P+ V +V++L + TR L ++ +VL++++R + +P FF++
Sbjct: 25 PQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVVLQILRRNSIDPSKKLDFFRWCYSL 84
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
+ HS Y+ + R++C+ GL L M+ DG D + L+ S + +
Sbjct: 85 RPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKFE 144
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC-LFRELMRSHSHLETST---- 221
+ +L + +N VYD++L LVK ++L A+ LF+ L S +H + T
Sbjct: 145 SALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRVI 204
Query: 222 ----------FNVLMGGLCSA---GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
N L+ GL A + F+ L GM+ F D +YN +HG
Sbjct: 205 IVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKGMKRFKF--DTWSYNICIHGFGCWG 262
Query: 269 EVDRARDLLKEVGLKSK-----FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
++D A L KE+ +S F P++ +Y ++I C K K+A ++DE+ SG +P
Sbjct: 263 DLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEP 322
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ T+ LI G K MD A+ IY +M ++G PD + + L++G + KV L+
Sbjct: 323 DNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+M + AS T+++LI L ++ R + L LK+ ++ V C+
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCRE 442
Query: 444 GNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGR 479
G ++ A +V EME + D T + L+ G +GR
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGR 479
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 117/249 (46%), Gaps = 7/249 (2%)
Query: 200 LDDAICLFRELMRSHSHLETS------TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
LD A+ LF+E+ S +S T+N L+ LC G +A + ++ G PD
Sbjct: 264 LDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGHEPD 323
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
TY L+ G C+ +D A + E+ F P+ Y ++ G K K+ EA LF
Sbjct: 324 NSTYRILIQGCCKSYRMDDAMRIYGEMQYNG-FVPDTIVYNCLLDGTLKARKVTEACQLF 382
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
++M + G + + +T+N LIDG + G ++ ++ + G D +TF+ + CR
Sbjct: 383 EKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCRE 442
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
GK+ + L EM TR S L T S L+ K R L++ ++ ++VP +
Sbjct: 443 GKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHIREGNLVPNVLRW 502
Query: 434 NHVIDGYCK 442
N ++ K
Sbjct: 503 NAGVEASLK 511
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 178/432 (41%), Gaps = 28/432 (6%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +L++ C+ A +Y M+++G +PD+ + L+ ++ + +L +
Sbjct: 326 TYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTIVYNCLLDGTLKARKVTEACQLFEKM 385
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V+ + Y+ L+ L ++ + + LF +L + ++ TF+++ LC G +
Sbjct: 386 VQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKL 445
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ A K + M + G S D+VT ++LL G + D L+K + + PNV +
Sbjct: 446 EGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRWDWKEKLMKHI-REGNLVPNVLRWNA 504
Query: 296 VISGYCKLSKMKE---------ASSLFDEMDRSGTKPNA-------------FTFNSLID 333
+ K + K+ S D M G++ + ++ + +D
Sbjct: 505 GVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSSPYMD 564
Query: 334 GFVKVGNMDSAL-GIYKKMLFHGCPP--DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
N L G+ + P DV + + Y G ++ L+ N
Sbjct: 565 QLAHQRNQPKPLFGLARGQRVEAKPDSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMG 624
Query: 391 ISA-SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
++ + +T++ ++S K Q AR +L Q+ + YN +I G K G D A
Sbjct: 625 VTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLA 684
Query: 450 NAIVVEMEEKCKP-DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
+A++ + ++ D + LI R +A +F M + G +PD ++ +
Sbjct: 685 SAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEV 744
Query: 509 LLKSGMPGEAAR 520
K+G EA +
Sbjct: 745 NSKAGKLKEAYK 756
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 161/407 (39%), Gaps = 66/407 (16%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
V S WTYN+L+ L + G + L+ ++ G+ D+ + +L+ +
Sbjct: 390 VRASCWTYNILIDGLFRNGRAEAGFTLFCDLKKKGQFVDAITFSIVGLQLCREGKLEGAV 449
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
+L+ E + V+ V +LL K + D ++E + H NVL
Sbjct: 450 KLVEEMETRGFSVDLVTISSLLIGFHKQGRWD-----WKEKLMKHIREGNLVPNVLR--- 501
Query: 230 CSAGDVDEAFK------------------FLNGMRSFGCSPDIVTYNTL----------- 260
+AG V+ + K FL+ M G D + +
Sbjct: 502 WNAG-VEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSEDDGASAEEVSPMEDDPWSSS 560
Query: 261 ---------------LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
L GL R + V+ D S +V T +S Y
Sbjct: 561 PYMDQLAHQRNQPKPLFGLARGQRVEAKPD-----------SFDVDMMNTFLSIYLSKGD 609
Query: 306 MKEASSLFDEMDRSG-TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ A LF+ + G T ++T+NS++ FVK G +A G+ +M + C D+ T+
Sbjct: 610 LSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYN 669
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+I+G ++G+ + + + + + ++ LI+ L K+ RL EA L +K
Sbjct: 670 VIIQGLGKMGRADLASAVLDRLTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSN 729
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTIL 470
I P YN +I+ K+G + EA + M + C P+ T TIL
Sbjct: 730 GINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDAGCLPNHVTDTIL 776
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 114/273 (41%), Gaps = 29/273 (10%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
L+ + + +Y+ + C+ + E L M G + L+D ++ G
Sbjct: 84 LRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKEDGVNLDQTMAKILLDSLIRSGKF 143
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM--NTRNISASLHTFS 399
+SALG+ M G + + S++ + ++ L + ++ + N S
Sbjct: 144 ESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRLALSILFKLLEASDNHSDDDTGRV 203
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQ-----------------PSIYNHVIDGYCK 442
+++SYL + + E LL L+R D+ + YN I G+
Sbjct: 204 IIVSYLPGTVAVNE---LLVGLRRADMRSEFKRVFEKLKGMKRFKFDTWSYNICIHGFGC 260
Query: 443 SGNVDEANAIVVEMEEKCK-------PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
G++D A ++ EM+E+ PD T+ LI C+ G+A DA++++ ++ +G
Sbjct: 261 WGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLCLFGKAKDALIVWDELKVSGH 320
Query: 496 SPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
PD T RIL KS +A RI + N
Sbjct: 321 EPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYN 353
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 82/160 (51%), Gaps = 3/160 (1%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TYN ++ S +KG +A+ + D M + D ++ + R D++ +L
Sbjct: 631 YTYNSMMSSFVKKGYFQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDR 690
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
++ V+Y+ L++ L K +LD+A LF + + + + ++N ++ AG
Sbjct: 691 LTKQGGYLDIVMYNTLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGK 750
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ EA+K+L M GC P+ VT +T+L L KE+++AR
Sbjct: 751 LKEAYKYLKAMLDAGCLPNHVT-DTILDYLG--KEMEKAR 787
>AT5G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4792072-4793868 REVERSE
LENGTH=598
Length = 598
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 115/426 (26%), Positives = 191/426 (44%), Gaps = 8/426 (1%)
Query: 37 TYASCDKGSITKPEAWFV-KIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPI 95
T SC + S E V K++ LF +++ VL L+ L++EV++R +
Sbjct: 116 TGVSCVESSTNPEEVERVCKVIDELFALDRNMEA-VLDEMKLDLSHDLIVEVLERFRHAR 174
Query: 96 L-GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF 154
F+FF + E+ H TYN ++ L + + + + M G L
Sbjct: 175 KPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTI 233
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
+ +FA + + + K ++ + LL L + +A LF +L
Sbjct: 234 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF 293
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ T+ VL+ G C ++ EA + N M G PDIV +N +L GL R + A
Sbjct: 294 TP-NMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAI 352
Query: 275 DLLKEVGLKSKFS-PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
L +KSK PNVRSYT +I +CK S M+ A FD+M SG +P+A + LI
Sbjct: 353 KLFH--VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
GF +D+ + K+M G PPD T+ +LI+ +G ++++M I
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
S+HTF++++ + + R + ++ + I P + Y +I G G EA +
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 454 VEMEEK 459
EM +K
Sbjct: 531 EEMLDK 536
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 160/344 (46%), Gaps = 4/344 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
++ Y++++S+L K + + + + E M + L TF + M +A + +A
Sbjct: 193 DSRTYNSMMSILAKTRQFETMVSVLEE-MGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 251
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
M+ + + T N LL L R K A+ L + LK +F+PN+ +YT +++G+C+
Sbjct: 252 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK--LKERFTPNMMTYTVLLNGWCR 309
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
+ + EA+ ++++M G KP+ N +++G ++ A+ ++ M G P+V +
Sbjct: 310 VRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRS 369
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+T +I +C+ + ++ + +M + ++ LI+ +L +LL++++
Sbjct: 370 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 429
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAP 481
P YN +I + I +M + + +P TF +++ + +
Sbjct: 430 EKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYE 489
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
++ +M+ G PD+ + +L L+ G EA R E +
Sbjct: 490 MGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEM 533
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 141/323 (43%), Gaps = 16/323 (4%)
Query: 238 AFKFL-NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
AF+F G + D TYN+++ L + ++ + +L+E+G K + + ++T
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT--METFTIA 234
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID--GFVKVGNMDSALGIYKKMLFH 354
+ + + K+A +F+ M + K T N L+D G K+G L K F
Sbjct: 235 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF- 293
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
P+++T+T L+ G+CRV + +W++M + + +V++ L +S + +A
Sbjct: 294 --TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 351
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAG 473
L +K P Y +I +CK +++ A +M + +PD +T LI G
Sbjct: 352 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 411
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDS- 532
+ + + +M G PD T L + MP RI + +N+ +
Sbjct: 412 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 471
Query: 533 ------LKKSYYEGTNSDVPFSV 549
+ KSY+ N ++ +V
Sbjct: 472 IHTFNMIMKSYFVARNYEMGRAV 494
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 97/240 (40%), Gaps = 1/240 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N++L L + S A L+ M+ G P+ R ++ F ++ + E +
Sbjct: 334 AHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 393
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ +Q +A VY L++ KLD L +E+ + T+N L+ + +
Sbjct: 394 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 453
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ + N M P I T+N ++ + + R + E+ +K P+ SYT
Sbjct: 454 EHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEM-IKKGICPDDNSYTV 512
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G K +EA +EM G K +N F + G + + ++ F G
Sbjct: 513 LIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 572
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/294 (18%), Positives = 120/294 (40%), Gaps = 35/294 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T N LL SL + L A++L+D ++ + P+ L++ + V L + + +
Sbjct: 265 TINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDM 323
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ + V ++ +L L++ K DAI LF + ++ +++ C +
Sbjct: 324 IDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSM 383
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG-------------- 281
+ A ++ + M G PD Y L+ G K++D +LLKE+
Sbjct: 384 ETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNAL 443
Query: 282 --------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
++++ P++ ++ ++ Y + +++DEM + G
Sbjct: 444 IKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGI 503
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
P+ ++ LI G + G A ++ML G ++ + + R G+
Sbjct: 504 CPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQ 557
>AT3G62470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23106600-23108399 REVERSE
LENGTH=599
Length = 599
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/426 (26%), Positives = 191/426 (44%), Gaps = 8/426 (1%)
Query: 37 TYASCDKGSITKPEAWFV-KIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPI 95
T SC + S E V K++ LF +++ VL L+ L++EV++R +
Sbjct: 117 TGVSCVESSTNPEEVERVCKVIDELFALDRNMEA-VLDEMKLDLSHDLIVEVLERFRHAR 175
Query: 96 L-GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF 154
F+FF + E+ H TYN ++ L + + + + M G L
Sbjct: 176 KPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTI 234
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
+ +FA + + + K ++ + LL L + +A LF +L
Sbjct: 235 AMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF 294
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ T+ VL+ G C ++ EA + N M G PDIV +N +L GL R ++ A
Sbjct: 295 TP-NMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAI 353
Query: 275 DLLKEVGLKSKFS-PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
L +KSK PNVRSYT +I +CK S M+ A FD+M SG +P+A + LI
Sbjct: 354 KLFH--VMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
GF +D+ + K+M G PPD T+ +LI+ + ++++M I
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
S+HTF++++ + + R + ++ + I P + Y +I G G EA +
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 454 VEMEEK 459
EM +K
Sbjct: 532 EEMLDK 537
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/344 (21%), Positives = 161/344 (46%), Gaps = 4/344 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
++ Y++++S+L K + + + + E M + L TF + M +A + +A
Sbjct: 194 DSRTYNSMMSILAKTRQFETMVSVLEE-MGTKGLLTMETFTIAMKAFAAAKERKKAVGIF 252
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
M+ + + T N LL L R K A+ L + LK +F+PN+ +YT +++G+C+
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDK--LKERFTPNMMTYTVLLNGWCR 310
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
+ + EA+ ++++M G KP+ N +++G ++ A+ ++ M G P+V +
Sbjct: 311 VRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRS 370
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+T +I +C+ + ++ + +M + ++ LI+ +L +LL++++
Sbjct: 371 YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQ 430
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAP 481
P YN +I + A I +M + + +P TF +++ + M
Sbjct: 431 EKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYE 490
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
++ +M+ G PD+ + +L L+ G EA R E +
Sbjct: 491 MGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEM 534
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 143/323 (44%), Gaps = 16/323 (4%)
Query: 238 AFKFL-NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
AF+F G + D TYN+++ L + ++ + +L+E+G K + + ++T
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT--METFTIA 235
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID--GFVKVGNMDSALGIYKKMLFH 354
+ + + K+A +F+ M + K T N L+D G K+G L K F
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERF- 294
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
P+++T+T L+ G+CRV + +W++M + + + +V++ L +S + +A
Sbjct: 295 --TPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDA 352
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAG 473
L +K P Y +I +CK +++ A +M + +PD +T LI G
Sbjct: 353 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 412
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDS- 532
+ + + +M G PD T L + MP A RI + +N+ +
Sbjct: 413 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPS 472
Query: 533 ------LKKSYYEGTNSDVPFSV 549
+ KSY+ N ++ +V
Sbjct: 473 IHTFNMIMKSYFMARNYEMGRAV 495
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 99/240 (41%), Gaps = 1/240 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N++L L + S A L+ M+ G P+ R ++ F ++ + E +
Sbjct: 335 AHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM 394
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ +Q +A VY L++ KLD L +E+ + T+N L+ + +
Sbjct: 395 VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMP 454
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ A + N M P I T+N ++ + + R + +E+ +K P+ SYT
Sbjct: 455 EHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEM-IKKGICPDDNSYTV 513
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I G K +EA +EM G K +N F + G + + ++ F G
Sbjct: 514 LIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYNKFAADFHRGGQPEIFEELAQRAKFSG 573
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/265 (20%), Positives = 119/265 (44%), Gaps = 11/265 (4%)
Query: 116 TYNMLLRSLCQ-KGLHSSAKLLYDCMRFDGKLPD----SRLLGFLVSSFALVDRLDVSKE 170
TY +LL C+ + L +A++ D M G PD + +L L+ S D + +
Sbjct: 300 TYTVLLNGWCRVRNLIEAARIWND-MIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHV 358
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
+ ++ C V+ Y ++ K + ++ AI F +++ S + + + L+ G
Sbjct: 359 MKSKGPCPNVRS----YTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFG 414
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
+ +D ++ L M+ G PD TYN L+ + K + A + ++ ++++ P++
Sbjct: 415 TQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKM-IQNEIEPSI 473
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
++ ++ Y + ++++EM + G P+ ++ LI G + G A ++
Sbjct: 474 HTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEE 533
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGK 375
ML G ++ + + R G+
Sbjct: 534 MLDKGMKTPLIDYNKFAADFHRGGQ 558
>AT1G07740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2399117-2400496 REVERSE
LENGTH=459
Length = 459
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 154/329 (46%), Gaps = 4/329 (1%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y +L+ L K D + R + + S F L+ AG VD+A + +
Sbjct: 84 YSSLIYKLAKSRNFDAVDQILRLVRYRNVRCRESLFMGLIQHYGKAGSVDKAIDVFHKIT 143
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS-KFSPNVRSYTTVISGYCKLSK 305
SF C I + NTL++ L E+++A+ G K + PN S+ +I G+
Sbjct: 144 SFDCVRTIQSLNTLINVLVDNGELEKAKSFFD--GAKDMRLRPNSVSFNILIKGFLDKCD 201
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ A +FDEM +P+ T+NSLI + +M A + + M+ P+ VTF
Sbjct: 202 WEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGL 261
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
L++G C G+ N L +M R L + +L+S L K R+ EA+ LL ++K+
Sbjct: 262 LMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRR 321
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAI 484
I P IYN +++ C V EA ++ EM+ K CKP+ T+ ++I G C +
Sbjct: 322 IKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGL 381
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSG 513
+ MLA+ P T + + L+K G
Sbjct: 382 NVLNAMLASRHCPTPATFVCMVAGLIKGG 410
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 139/295 (47%), Gaps = 1/295 (0%)
Query: 112 HSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
+ + N L+ L G AK +D + P+S L+ F + + ++
Sbjct: 149 RTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKV 208
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
E +VQ + V Y++L+ L +++ + A L ++++ TF +LM GLC
Sbjct: 209 FDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCC 268
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G+ +EA K + M GC P +V Y L+ L + +D A+ LL E+ K + P+V
Sbjct: 269 KGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMK-KRRIKPDVV 327
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
Y +++ C ++ EA + EM G KPNA T+ +IDGF ++ + DS L + M
Sbjct: 328 IYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM 387
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
L P TF ++ G + G +++ + M +N+S + L+S LC
Sbjct: 388 LASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLC 442
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 159/372 (42%), Gaps = 2/372 (0%)
Query: 88 VKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLP 147
+K + +P F +E + H + +Y+ L+ L + + + +R+
Sbjct: 56 LKEIEDPEEALSLFHQYQE-MGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRC 114
Query: 148 DSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLF 207
L L+ + +D + ++ + + L++VLV + +L+ A F
Sbjct: 115 RESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFF 174
Query: 208 RELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI 267
+ +FN+L+ G D + A K + M P +VTYN+L+ LCR
Sbjct: 175 DGAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRN 234
Query: 268 KEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
++ +A+ LL+++ +K + PN ++ ++ G C + EA L +M+ G KP
Sbjct: 235 DDMGKAKSLLEDM-IKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVN 293
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
+ L+ K G +D A + +M PDVV + L+ C +V + EM
Sbjct: 294 YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQ 353
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
+ + T+ ++I C+ ++L + + P P+ + ++ G K GN+D
Sbjct: 354 MKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLD 413
Query: 448 EANAIVVEMEEK 459
A ++ M +K
Sbjct: 414 HACFVLEVMGKK 425
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 143/311 (45%), Gaps = 8/311 (2%)
Query: 137 YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
+DC+R L + L+ LV + L+ +K A+ +++ N+V ++ L+ +
Sbjct: 145 FDCVRTIQSL--NTLINVLVDN----GELEKAKSFFDGAKDMRLRPNSVSFNILIKGFLD 198
Query: 197 HNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVT 256
+ A +F E++ T+N L+G LC D+ +A L M P+ VT
Sbjct: 199 KCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVT 258
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
+ L+ GLC E + A+ L+ ++ + P + +Y ++S K ++ EA L EM
Sbjct: 259 FGLLMKGLCCKGEYNEAKKLMFDMEYRG-CKPGLVNYGILMSDLGKRGRIDEAKLLLGEM 317
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
+ KP+ +N L++ + A + +M GC P+ T+ +I+G+CR+
Sbjct: 318 KKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDF 377
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+ GL++ + M + TF +++ L K L A +L + + ++ + ++
Sbjct: 378 DSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNL 437
Query: 437 IDGYC-KSGNV 446
+ C K G V
Sbjct: 438 LSDLCIKDGGV 448
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 7/247 (2%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
++ V S TYN L+ LC+ AK L + M P++ G L+ +
Sbjct: 214 EMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYN 273
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+K+L+ + + + V Y L+S L K ++D+A L E+ + + +N+L+
Sbjct: 274 EAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILV 333
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
LC+ V EA++ L M+ GC P+ TY ++ G CRI++ D ++L + L S+
Sbjct: 334 NHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAM-LASRH 392
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDR------SGTKPNAFTFNSLIDGFVKVGN 340
P ++ +++G K + A + + M + SG N + + DG V
Sbjct: 393 CPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIKDGGVYCEA 452
Query: 341 MDSALGI 347
+ + I
Sbjct: 453 LSEVISI 459
>AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16915860-16918238 FORWARD
LENGTH=709
Length = 709
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/436 (24%), Positives = 188/436 (43%), Gaps = 39/436 (8%)
Query: 114 FWTYNMLLRSLCQKGLHSSAKLL--YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
F Y+++++SL + S LL Y + D D +L+ ++ FA + +L
Sbjct: 232 FVNYSLVIQSLTRSNKIDSVMLLRLYKEIERDKLELDVQLVNDIIMGFAKSGDPSKALQL 291
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
L AQ + +++S L + +A LF EL +S T +N L+ G
Sbjct: 292 LGMAQATGLSAKTATLVSIISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVK 351
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G + +A ++ M G SPD TY+ L+ + AR +LKE+ PN
Sbjct: 352 TGPLKDAESMVSEMEKRGVSPDEHTYSLLIDAYVNAGRWESARIVLKEME-AGDVQPNSF 410
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
++ +++G+ + ++ + EM G KP+ +N +ID F K +D A+ + +M
Sbjct: 411 VFSRLLAGFRDRGEWQKTFQVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM 470
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGK--------------------------VN-YG-LDLW 383
L G PD VT+ +LI+ +C+ G+ +N YG + W
Sbjct: 471 LSEGIEPDRVTWNTLIDCHCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERW 530
Query: 384 HEMN-------TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
+M ++ I ++ T + L+ KS R +A + L ++K + P ++YN +
Sbjct: 531 DDMKRLLGKMKSQGILPNVVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNAL 590
Query: 437 IDGYCKSGNVDEA-NAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
I+ Y + G ++A NA V + KP LI R +A + M G
Sbjct: 591 INAYAQRGLSEQAVNAFRVMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGV 650
Query: 496 SPDEITVRILSSCLLK 511
PD +T L L++
Sbjct: 651 KPDVVTYTTLMKALIR 666
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 175/391 (44%), Gaps = 2/391 (0%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
++ +L G A+ L++ +R G P +R L+ + L ++ +++E +
Sbjct: 310 IISALADSGRTLEAEALFEELRQSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRG 369
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
V + Y L+ V + + A + +E+ + F+ L+ G G+ + F
Sbjct: 370 VSPDEHTYSLLIDAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTF 429
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ L M+S G PD YN ++ + +D A + L P+ ++ T+I
Sbjct: 430 QVLKEMKSIGVKPDRQFYNVVIDTFGKFNCLDHAMTTFDRM-LSEGIEPDRVTWNTLIDC 488
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+CK + A +F+ M+R G P A T+N +I+ + D + KM G P+
Sbjct: 489 HCKHGRHIVAEEMFEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPN 548
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VVT T+L++ Y + G+ N ++ EM + + S ++ LI+ + ++A + R
Sbjct: 549 VVTHTTLVDVYGKSGRFNDAIECLEEMKSVGLKPSSTMYNALINAYAQRGLSEQAVNAFR 608
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKG 478
+ + P N +I+ + + EA A++ M+E KPD T+T L+
Sbjct: 609 VMTSDGLKPSLLALNSLINAFGEDRRDAEAFAVLQYMKENGVKPDVVTYTTLMKALIRVD 668
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
+ V++ +M+ +GC PD +L S L
Sbjct: 669 KFQKVPVVYEEMIMSGCKPDRKARSMLRSAL 699
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 175/385 (45%), Gaps = 7/385 (1%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICL--FRELMR 212
L+ + A + ++ + L+A+ + + Q + V Y ++ L + NK+D + L ++E+ R
Sbjct: 203 LIGACARNNDIEKALNLIAKMRQDGYQSDFVNYSLVIQSLTRSNKIDSVMLLRLYKEIER 262
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDR 272
L+ N ++ G +GD +A + L ++ G S T +++ L
Sbjct: 263 DKLELDVQLVNDIIMGFAKSGDPSKALQLLGMAQATGLSAKTATLVSIISALADSGRTLE 322
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
A L +E+ +S P R+Y ++ GY K +K+A S+ EM++ G P+ T++ LI
Sbjct: 323 AEALFEELR-QSGIKPRTRAYNALLKGYVKTGPLKDAESMVSEMEKRGVSPDEHTYSLLI 381
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
D +V G +SA + K+M P+ F+ L+ G+ G+ + EM + +
Sbjct: 382 DAYVNAGRWESARIVLKEMEAGDVQPNSFVFSRLLAGFRDRGEWQKTFQVLKEMKSIGVK 441
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
++V+I K N L A ++ I P +N +ID +CK G A +
Sbjct: 442 PDRQFYNVVIDTFGKFNCLDHAMTTFDRMLSEGIEPDRVTWNTLIDCHCKHGRHIVAEEM 501
Query: 453 VVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLK 511
ME + C P T+ I+I + + R D + KM + G P+ +T L K
Sbjct: 502 FEAMERRGCLPCATTYNIMINSYGDQERWDDMKRLLGKMKSQGILPNVVTHTTLVDVYGK 561
Query: 512 SGMPGEAARIKESLHENQGDSLKKS 536
SG +A E L E + LK S
Sbjct: 562 SGRFNDAI---ECLEEMKSVGLKPS 583
>AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active 2 |
chr1:28119237-28122314 REVERSE LENGTH=862
Length = 862
Score = 133 bits (334), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/447 (22%), Positives = 190/447 (42%), Gaps = 38/447 (8%)
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
+ F++ + ++ + Y +++ L ++GL ++D M G L++
Sbjct: 125 LRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALIN 184
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHN-KLDDAICLFRELMRSHSH 216
++ R + S ELL + K+ + + Y+ +++ + + + LF E+
Sbjct: 185 AYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQ 244
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
+ T+N L+ G DEA M G PD+ TY+ L+ +++ +++ DL
Sbjct: 245 PDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDL 304
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
L E+ P++ SY ++ Y K +KEA +F +M +G PNA T++ L++ F
Sbjct: 305 LGEMASGGSL-PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFG 363
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
+ G D ++ +M PD T+ LIE + G + L+H+M NI +
Sbjct: 364 QSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDME 423
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG----------------- 439
T+ +I K ++AR +L+ + DIVP Y VI+
Sbjct: 424 TYEGIIFACGKGGLHEDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTM 483
Query: 440 ------------------YCKSGNVDEANAIVVEMEEKCKP-DKFTFTILIAGHCMKGRA 480
+ + G V E+ AI+ + + P ++ TF I + G+
Sbjct: 484 HEVGSNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKF 543
Query: 481 PDAIVIFYKMLATGCSPDEITVRILSS 507
+A+ + M + C PDE T+ + S
Sbjct: 544 EEAVKTYVDMEKSRCDPDERTLEAVLS 570
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/453 (22%), Positives = 190/453 (41%), Gaps = 49/453 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN LL + +GL A++++ M G +PD LV +F + RL+ +LL E
Sbjct: 249 TYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEM 308
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ Y+ LL K + +A+ +F ++ + +T++VL+ +G
Sbjct: 309 ASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRY 368
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEV---------------------- 270
D+ + M+S PD TYN L+ KEV
Sbjct: 369 DDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGI 428
Query: 271 ----------DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
+ AR +L+ + + P+ ++YT VI + + + +EA F+ M G
Sbjct: 429 IFACGKGGLHEDARKILQYM-TANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVG 487
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
+ P+ TF+SL+ F + G + + I +++ G P + TF + IE Y + GK +
Sbjct: 488 SNPSIETFHSLLYSFARGGLVKESEAILSRLVDSGIPRNRDTFNAQIEAYKQGGKFEEAV 547
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+ +M T ++S + + E R+ ++K +DI+P Y ++ Y
Sbjct: 548 KTYVDMEKSRCDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMCYCMMLAVY 607
Query: 441 CKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPD----AIV--IFYKMLATG 494
K+ D+ N ++ EM ++ + + G +KG D IV + K+ + G
Sbjct: 608 GKTERWDDVNELLEEM----LSNRVSNIHQVIGQMIKGDYDDDSNWQIVEYVLDKLNSEG 663
Query: 495 CSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
C + +R ++ L G+ R L+E
Sbjct: 664 CG---LGIRFYNALLDALWWLGQKERAARVLNE 693
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 141/300 (47%), Gaps = 4/300 (1%)
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGM-RSFGCSPDIVTYNTLLHGLCRIKEVDRARD 275
L + F ++ GD + + M R C P+ Y ++ L R +D+ +
Sbjct: 103 LSLNDFALVFKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLE 162
Query: 276 LLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
+ E+ + S +V SYT +I+ Y + + + + L D M P+ T+N++I+
Sbjct: 163 VFDEMPSQG-VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINAC 221
Query: 336 VKVG-NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
+ G + + LG++ +M G PD+VT+ +L+ G + ++ MN I
Sbjct: 222 ARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPD 281
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
L T+S L+ K RL++ DLL ++ +P + YN +++ Y KSG++ EA +
Sbjct: 282 LTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFH 341
Query: 455 EMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+M+ C P+ T+++L+ GR D +F +M ++ PD T IL + G
Sbjct: 342 QMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGG 401
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 149/318 (46%), Gaps = 3/318 (0%)
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
+ +++ L G +D+ + + M S G S + +Y L++ R + + +LL +
Sbjct: 144 YTIMISLLGREGLLDKCLEVFDEMPSQGVSRSVFSYTALINAYGRNGRYETSLELLDRMK 203
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEAS-SLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
K SP++ +Y TVI+ + E LF EM G +P+ T+N+L+ G
Sbjct: 204 -NEKISPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTLLSACAIRGL 262
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
D A +++ M G PD+ T++ L+E + ++ ++ DL EM + + +++V
Sbjct: 263 GDEAEMVFRTMNDGGIVPDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNV 322
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-K 459
L+ KS ++EA + Q++ P + Y+ +++ + +SG D+ + +EM+
Sbjct: 323 LLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSN 382
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
PD T+ ILI G + + +F+ M+ PD T + K G+ +A
Sbjct: 383 TDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLHEDAR 442
Query: 520 RIKESLHENQGDSLKKSY 537
+I + + N K+Y
Sbjct: 443 KILQYMTANDIVPSSKAY 460
>AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 |
chr1:19312078-19314145 REVERSE LENGTH=650
Length = 650
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 167/321 (52%), Gaps = 12/321 (3%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPD----SRLLGFLVSSFALVDRLDVSKELL 172
YN L++ L + + A ++ M G P+ S LL LV+ LV RLD E+
Sbjct: 308 YNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLV-RLDGVVEI- 365
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+K + +Y L+ L K + +A LF ++ E ++ ++ LC A
Sbjct: 366 -----SKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGA 420
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G EA + L+ + G D + YNT+ L ++K++ DL +++ K SP++ +
Sbjct: 421 GKTIEAIEMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMK-KDGPSPDIFT 479
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +I+ + ++ ++ EA ++F+E++RS KP+ ++NSLI+ K G++D A +K+M
Sbjct: 480 YNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQ 539
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G PDVVT+++L+E + + +V L+ EM + ++ T+++L+ L K+ R
Sbjct: 540 EKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTA 599
Query: 413 EARDLLRQLKRTDIVPQPSIY 433
EA DL ++K+ + P Y
Sbjct: 600 EAVDLYSKMKQQGLTPDSITY 620
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 201/426 (47%), Gaps = 9/426 (2%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+K ++ + +TY LL++ + +S A +Y +R G D L+ + A ++
Sbjct: 195 KKWDLKMNSFTYKCLLQAYLRSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDALAKDEKA 254
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
E + + C + + Y ++ + + K D+A+ LF E++ L +N L
Sbjct: 255 CQVFEDMKKRHCRR---DEYTYTIMIRTMGRIGKCDEAVGLFNEMITEGLTLNVVGYNTL 311
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
M L VD+A + + M GC P+ TY+ LL+ L ++ R D + E+ K
Sbjct: 312 MQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEGQLVRL-DGVVEIS-KRY 369
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
+ + SY ++ KL + EA LF +M K ++ S+++ G A+
Sbjct: 370 MTQGIYSY--LVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAI 427
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+ K+ G D + + ++ ++ ++++ DL+ +M S + T+++LI+
Sbjct: 428 EMLSKIHEKGVVTDTMMYNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASF 487
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDK 464
+ + EA ++ +L+R+D P YN +I+ K+G+VDEA+ EM+EK PD
Sbjct: 488 GRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHVRFKEMQEKGLNPDV 547
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKES 524
T++ L+ R A +F +ML GC P+ +T IL CL K+G EA +
Sbjct: 548 VTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLEKNGRTAEAVDLYSK 607
Query: 525 LHENQG 530
+ + QG
Sbjct: 608 MKQ-QG 612
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 173/390 (44%), Gaps = 37/390 (9%)
Query: 114 FWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
+ YNMLL +L + A +++ M+ D ++ + + + D + L
Sbjct: 238 IFAYNMLLDALAKD---EKACQVFEDMKKRHCRRDEYTYTIMIRTMGRIGKCDEAVGLFN 294
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR--------------------- 212
E + +N V Y+ L+ VL K +D AI +F ++
Sbjct: 295 EMITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSRMVETGCRPNEYTYSLLLNLLVAEG 354
Query: 213 -----------SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
S ++ ++ L+ L G V EA + M SF + +Y ++L
Sbjct: 355 QLVRLDGVVEISKRYMTQGIYSYLVRTLSKLGHVSEAHRLFCDMWSFPVKGERDSYMSML 414
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
LC + A ++L ++ K + + Y TV S KL ++ LF++M + G
Sbjct: 415 ESLCGAGKTIEAIEMLSKIHEKGVVT-DTMMYNTVFSALGKLKQISHIHDLFEKMKKDGP 473
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
P+ FT+N LI F +VG +D A+ I++++ C PD++++ SLI + G V+
Sbjct: 474 SPDIFTYNILIASFGRVGEVDEAINIFEELERSDCKPDIISYNSLINCLGKNGDVDEAHV 533
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ EM + ++ + T+S L+ K+ R++ A L ++ P YN ++D
Sbjct: 534 RFKEMQEKGLNPDVVTYSTLMECFGKTERVEMAYSLFEEMLVKGCQPNIVTYNILLDCLE 593
Query: 442 KSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
K+G EA + +M+++ PD T+T+L
Sbjct: 594 KNGRTAEAVDLYSKMKQQGLTPDSITYTVL 623
Score = 119 bits (297), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 203/453 (44%), Gaps = 22/453 (4%)
Query: 80 TPSLVLEVVKRLNNPILGFKFFQFTREKLNV-HHSFWTYNMLLRSLCQKGL---HSSAKL 135
TP E++K LN+P+L +FF+ + + YN ++ L + L +
Sbjct: 98 TPDEASEILKSLNSPLLAVEFFKLVPSLCPYSQNDPFLYNRIILILSRSNLPDRFDRVRS 157
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV 195
+ D M + + L+ F + L + L+ + +++N+ Y LL +
Sbjct: 158 ILDSMVKSNVHGNISTVNILIGFFGNTEDLQMCLRLVKKWD---LKMNSFTYKCLLQAYL 214
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
+ A ++ E+ R L+ +N+L+ L A D ++A + M+ C D
Sbjct: 215 RSRDYSKAFDVYCEIRRGGHKLDIFAYNMLLDAL--AKD-EKACQVFEDMKKRHCRRDEY 271
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
TY ++ + RI + D A L E+ + + NV Y T++ K + +A +F
Sbjct: 272 TYTIMIRTMGRIGKCDEAVGLFNEM-ITEGLTLNVVGYNTLMQVLAKGKMVDKAIQVFSR 330
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNM---DSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
M +G +PN +T++ L++ V G + D + I K+ + G ++ L+ +
Sbjct: 331 MVETGCRPNEYTYSLLLNLLVAEGQLVRLDGVVEISKRYMTQG------IYSYLVRTLSK 384
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
+G V+ L+ +M + + ++ ++ LC + + EA ++L ++ +V +
Sbjct: 385 LGHVSEAHRLFCDMWSFPVKGERDSYMSMLESLCGAGKTIEAIEMLSKIHEKGVVTDTMM 444
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
YN V K + + + +M++ PD FT+ ILIA G +AI IF ++
Sbjct: 445 YNTVFSALGKLKQISHIHDLFEKMKKDGPSPDIFTYNILIASFGRVGEVDEAINIFEELE 504
Query: 492 ATGCSPDEITVRILSSCLLKSGMPGEA-ARIKE 523
+ C PD I+ L +CL K+G EA R KE
Sbjct: 505 RSDCKPDIISYNSLINCLGKNGDVDEAHVRFKE 537
>AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:25041901-25044849 REVERSE
LENGTH=982
Length = 982
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 175/389 (44%), Gaps = 42/389 (10%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y++++ L + N ++D L + + T+ +++ LC D D AF ++ M
Sbjct: 515 YNSVIKCLFQENIIEDLASLVNIIQELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAME 574
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
G P + Y++++ L + V A + ++ L+S P+ +Y +I+ Y + ++
Sbjct: 575 ELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM-LESGIQPDEIAYMIMINTYARNGRI 633
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
EA+ L +E+ + +P++FT+ LI GFVK+G M+ KML G P+VV +T+L
Sbjct: 634 DEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTAL 693
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD---------L 417
I + + G + L+ M +I + L+S L ++ ++ R L
Sbjct: 694 IGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITLLSGLWRAMARKKKRQVIVEPGKEKL 753
Query: 418 LRQLKRT----------------------------DIVPQPSIYNHVIDGYCKSGNVDEA 449
L++L RT I+P ++N +I GYC +G +DEA
Sbjct: 754 LQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKKSIIPNLYLHNTIITGYCAAGRLDEA 813
Query: 450 -NAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
N + +E P+ T+TIL+ H G AI +F T C PD++ L
Sbjct: 814 YNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESAIDLFE---GTNCEPDQVMYSTLLKG 870
Query: 509 LLKSGMPGEAARIKESLHENQGDSLKKSY 537
L P +A + + ++ + K SY
Sbjct: 871 LCDFKRPLDALALMLEMQKSGINPNKDSY 899
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/412 (21%), Positives = 171/412 (41%), Gaps = 74/412 (17%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY +++ LC+K +A + D M G P + ++ S R+ ++E A+
Sbjct: 549 TYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAEETFAKM 608
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ +Q + + Y +++ ++ ++D+A L E+++ + T+ VL+ G G +
Sbjct: 609 LESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGFVKMGMM 668
Query: 236 DEAFKFLNGMRSFGCSPDIVTYN-----------------------------------TL 260
++ ++L+ M G SP++V Y TL
Sbjct: 669 EKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDHIAYITL 728
Query: 261 LHGLCRIKEVDRARDLLKEVG------------------------------------LKS 284
L GL R + R ++ E G +K
Sbjct: 729 LSGLWRAMARKKKRQVIVEPGKEKLLQRLIRTKPLVSIPSSLGNYGSKSFAMEVIGKVKK 788
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
PN+ + T+I+GYC ++ EA + + M + G PN T+ L+ ++ G+++SA
Sbjct: 789 SIIPNLYLHNTIITGYCAAGRLDEAYNHLESMQKEGIVPNLVTYTILMKSHIEAGDIESA 848
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
+ +++ C PD V +++L++G C + L L EM I+ + ++ L+
Sbjct: 849 IDLFEGT---NCEPDQVMYSTLLKGLCDFKRPLDALALMLEMQKSGINPNKDSYEKLLQC 905
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
LC S EA +++ + DI P+ + +I C+ + EA A+ M
Sbjct: 906 LCYSRLTMEAVKVVKDMAALDIWPRSINHTWLIYILCEEKKLREARALFAIM 957
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 180/463 (38%), Gaps = 67/463 (14%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y L C++G + A+ L+D M DG D + L+ + + + ++ L
Sbjct: 240 YKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMV 299
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+++ +++ L+ +K LD +F ++++ T+++++G C G+VD
Sbjct: 300 ERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVD 359
Query: 237 EAFK-FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
A + F+N S S ++ Y L+ G + +D+A DLL + L + P+ +Y
Sbjct: 360 YALRLFVNNTGSEDISRNVHCYTNLIFGFYKKGGMDKAVDLLMRM-LDNGIVPDHITYFV 418
Query: 296 VISGYCKLSKMKEA-----------------------------SSLFDEMDRSGTKPNAF 326
++ K ++K A SL E+ R A
Sbjct: 419 LLKMLPKCHELKYAMVILQSILDNGCGINPPVIDDLGNIEVKVESLLGEIARKDANLAAV 478
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKMLFHGCP----------------------------- 357
+ N +AL +KM+ GC
Sbjct: 479 GLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNII 538
Query: 358 ------PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
PDV T+ ++ C+ + + M + ++ +S +I L K R+
Sbjct: 539 QELDFVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRV 598
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
EA + ++ + I P Y +I+ Y ++G +DEAN +V E+ + +P FT+T+L
Sbjct: 599 VEAEETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVL 658
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
I+G G KML G SP+ + L LK G
Sbjct: 659 ISGFVKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKG 701
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 161/369 (43%), Gaps = 18/369 (4%)
Query: 109 NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
NVH Y L+ +KG A L M +G +PD L+ L +
Sbjct: 377 NVH----CYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYA 432
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+L N +N V D+L ++ VK L E+ R ++L V+
Sbjct: 433 MVILQSILDNGCGINPPVIDDLGNIEVKVESL------LGEIARKDANLAAVGLAVVTTA 486
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR---IKEVDRARDLLKEVGLKSK 285
LCS + A + M + GC+P +YN+++ L + I+++ ++++E+
Sbjct: 487 LCSQRNYIAALSRIEKMVNLGCTPLPFSYNSVIKCLFQENIIEDLASLVNIIQEL----D 542
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
F P+V +Y V++ CK + A ++ D M+ G +P ++S+I K G + A
Sbjct: 543 FVPDVDTYLIVVNELCKKNDRDAAFAIIDAMEELGLRPTVAIYSSIIGSLGKQGRVVEAE 602
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+ KML G PD + + +I Y R G+++ +L E+ + S T++VLIS
Sbjct: 603 ETFAKMLESGIQPDEIAYMIMINTYARNGRIDEANELVEEVVKHFLRPSSFTYTVLISGF 662
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDK 464
K +++ L ++ + P +Y +I + K G+ + + M E K D
Sbjct: 663 VKMGMMEKGCQYLDKMLEDGLSPNVVLYTALIGHFLKKGDFKFSFTLFGLMGENDIKHDH 722
Query: 465 FTFTILIAG 473
+ L++G
Sbjct: 723 IAYITLLSG 731
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 102/448 (22%), Positives = 185/448 (41%), Gaps = 42/448 (9%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRF-DGKLPDSRLLGFLVSSFALVDRLDVSK----EL 171
Y L+R L + G A+ Y+ +G +PDS +L +V + R D ++ +
Sbjct: 98 YGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDSMVFCLVKLRRFDEARAHLDRI 157
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+A +++V D L + ++ +A F ++ S L L GLC
Sbjct: 158 IASGYAPSRNSSSLVVDELCN----QDRFLEAFHCFEQVKERGSGLWLWCCKRLFKGLCG 213
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVT-YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
G ++EA L+ + P V Y +L + C+ A L + + + V
Sbjct: 214 HGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEAEALFDHMEVDGYYVDKV 273
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
YT ++ YCK + M A L+ M + + FN+LI GF+K+G +D ++ +
Sbjct: 274 M-YTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHGFMKLGMLDKGRVMFSQ 332
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW-HEMNTRNISASLHTFSVLISYLCKSN 409
M+ G +V T+ +I YC+ G V+Y L L+ + + +IS ++H ++ LI K
Sbjct: 333 MIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISRNVHCYTNLIFGFYKKG 392
Query: 410 RLQEARDLLRQLKRTDIVPQPSIY--------------------NHVIDGYC--KSGNVD 447
+ +A DLL ++ IVP Y ++D C +D
Sbjct: 393 GMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVILQSILDNGCGINPPVID 452
Query: 448 EANAIVVEME----EKCKPDK----FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
+ I V++E E + D ++ C + A+ KM+ GC+P
Sbjct: 453 DLGNIEVKVESLLGEIARKDANLAAVGLAVVTTALCSQRNYIAALSRIEKMVNLGCTPLP 512
Query: 500 ITVRILSSCLLKSGMPGEAARIKESLHE 527
+ + CL + + + A + + E
Sbjct: 513 FSYNSVIKCLFQENIIEDLASLVNIIQE 540
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 174/394 (44%), Gaps = 4/394 (1%)
Query: 131 SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC-NKVQVNAVVYDN 189
S A L+ D +G DS G L+ + + V++ + N + ++ V D+
Sbjct: 77 SEAALVADFAVDNGIELDSSCYGALIRKLTEMGQPGVAETFYNQRVIGNGIVPDSSVLDS 136
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
++ LVK + D+A ++ S ++ ++++ LC+ EAF ++ G
Sbjct: 137 MVFCLVKLRRFDEARAHLDRIIASGYAPSRNSSSLVVDELCNQDRFLEAFHCFEQVKERG 196
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
+ L GLC ++ A +L + ++ V Y ++ +CK EA
Sbjct: 197 SGLWLWCCKRLFKGLCGHGHLNEAIGMLDTLCGMTRMPLPVNLYKSLFYCFCKRGCAAEA 256
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
+LFD M+ G + + L+ + K NM A+ +Y +M+ D F +LI G
Sbjct: 257 EALFDHMEVDGYYVDKVMYTCLMKEYCKDNNMTMAMRLYLRMVERSFELDPCIFNTLIHG 316
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA-RDLLRQLKRTDIVP 428
+ ++G ++ G ++ +M + + +++ T+ ++I CK + A R + DI
Sbjct: 317 FMKLGMLDKGRVMFSQMIKKGVQSNVFTYHIMIGSYCKEGNVDYALRLFVNNTGSEDISR 376
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
Y ++I G+ K G +D+A +++ M + PD T+ +L+ A+VI
Sbjct: 377 NVHCYTNLIFGFYKKGGMDKAVDLLMRMLDNGIVPDHITYFVLLKMLPKCHELKYAMVIL 436
Query: 488 YKMLATGCSPDEITVRILSSCLLK-SGMPGEAAR 520
+L GC + + L + +K + GE AR
Sbjct: 437 QSILDNGCGINPPVIDDLGNIEVKVESLLGEIAR 470
>AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3948886-3950859 FORWARD
LENGTH=657
Length = 657
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/365 (24%), Positives = 184/365 (50%), Gaps = 9/365 (2%)
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE-TSTFNV 224
+V ++ AE C V V+A+ +N + L+ N++D +++E M S ++E +TFN+
Sbjct: 169 EVIEQTRAEGFC--VSVHAL--NNFMGCLLNVNEIDRFWKVYKE-MDSLGYVENVNTFNL 223
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
++ C + EA M G P++V++N ++ G C+ ++ A LL ++G+ S
Sbjct: 224 VIYSFCKESKLFEALSVFYRMLKCGVWPNVVSFNMMIDGACKTGDMRFALQLLGKMGMMS 283
Query: 285 K--FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
SPN +Y +VI+G+CK ++ A + +M +SG N T+ +L+D + + G+ D
Sbjct: 284 GNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGRAGSSD 343
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
AL + +M G + V + S++ G + + + +MN++N+ T ++++
Sbjct: 344 EALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKNMQIDRFTQAIVV 403
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCK 461
LC++ ++EA + RQ+ +V +N ++ + + + A+ I+ M +
Sbjct: 404 RGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSMLVQGLS 463
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
D +F LI G+ +G+ A+ I+ M+ + + + + + L K GM G A +
Sbjct: 464 LDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMAGAAEAV 523
Query: 522 KESLH 526
++
Sbjct: 524 VNAME 528
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 186/393 (47%), Gaps = 13/393 (3%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
T+N+++ S C++ L + + Y ++ G P+ ++ + + +LL +
Sbjct: 220 TFNLVIYSFCKESKLFEALSVFYRMLKC-GVWPNVVSFNMMIDGACKTGDMRFALQLLGK 278
Query: 175 A---QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
N V NAV Y+++++ K +LD A + ++++S T+ L+
Sbjct: 279 MGMMSGNFVSPNAVTYNSVINGFCKAGRLDLAERIRGDMVKSGVDCNERTYGALVDAYGR 338
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
AG DEA + + M S G + V YN++++ L +++ A +L+++ K+ +
Sbjct: 339 AGSSDEALRLCDEMTSKGLVVNTVIYNSIVYWLFMEGDIEGAMSVLRDMNSKN-MQIDRF 397
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+ V+ G C+ +KEA ++ + N+L+ FV+ + A I M
Sbjct: 398 TQAIVVRGLCRNGYVKEAVEFQRQISEKKLVEDIVCHNTLMHHFVRDKKLACADQILGSM 457
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
L G D ++F +LI+GY + GK+ L+++ M N +++L ++ +++ L K
Sbjct: 458 LVQGLSLDAISFGTLIDGYLKEGKLERALEIYDGMIKMNKTSNLVIYNSIVNGLSKRGMA 517
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDK---FTFT 468
A ++ ++ DIV YN +++ K+GNV+EA+ I+ +M+++ TF
Sbjct: 518 GAAEAVVNAMEIKDIVT----YNTLLNESLKTGNVEEADDILSKMQKQDGEKSVSLVTFN 573
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
I+I C G A + M+ G PD IT
Sbjct: 574 IMINHLCKFGSYEKAKEVLKFMVERGVVPDSIT 606
>AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:6129255-6130775 REVERSE
LENGTH=506
Length = 506
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/430 (24%), Positives = 198/430 (46%), Gaps = 14/430 (3%)
Query: 77 KHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLL 136
K ++ + ++KR +P F ++ +H+ TY++LL +L + + +
Sbjct: 52 KFISHESAVSLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAI 111
Query: 137 YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
M+++ L L+ F+ D D E+ N +QV A V +L ++
Sbjct: 112 LHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMF-----NLIQVIARVKPSLNAISTC 166
Query: 197 HNKLDDA--ICLFRELMRSHSH-----LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
N L D+ + L R+L+ H T FN+L+ C GD++ AF + M+ G
Sbjct: 167 LNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSG 226
Query: 250 CS-PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
S P+ +TY+TL+ L A +L +++ K SP+ ++ +I+G+C+ +++
Sbjct: 227 ISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVER 286
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A + D M ++G PN + +++L++GF KVG + A + ++ G D V +T+L+
Sbjct: 287 AKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMN 346
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
+CR G+ + + L EM A T++V++ L R +EA +L Q +
Sbjct: 347 CFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHL 406
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIF 487
Y +++ C +G +++A + M E+ P T+ L+ C G + +
Sbjct: 407 NKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVL 466
Query: 488 YKMLATGCSP 497
L G P
Sbjct: 467 IGFLRIGLIP 476
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 166/349 (47%), Gaps = 4/349 (1%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N Y LL LV+H K + ++ + S F LM + D+ +
Sbjct: 88 NNATYSVLLDNLVRHKKFLAVDAILHQMKYETCRFQESLFLNLMRHFSRSDLHDKVMEMF 147
Query: 243 NGMRSFG-CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
N ++ P + +T L+ L EV+ +R LL PN + ++ +C
Sbjct: 148 NLIQVIARVKPSLNAISTCLNLLIDSGEVNLSRKLLLYAKHNLGLQPNTCIFNILVKHHC 207
Query: 302 KLSKMKEASSLFDEMDRSG-TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF-HGCPPD 359
K + A + +EM RSG + PN+ T+++L+D A+ +++ M+ G PD
Sbjct: 208 KNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPD 267
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
VTF +I G+CR G+V + M + +++ +S L++ CK ++QEA+
Sbjct: 268 PVTFNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFD 327
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKG 478
++K+T + Y +++ +C++G DEA ++ EM+ +C+ D T+ +++ G +G
Sbjct: 328 EVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEG 387
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
R+ +A+ + + + G ++ + RI+ + L +G +A + + E
Sbjct: 388 RSEEALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSE 436
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 130/261 (49%), Gaps = 2/261 (0%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKF 241
N++ Y L+ L H++ +A+ LF +++ + TFNV++ G C AG+V+ A K
Sbjct: 231 NSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKI 290
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
L+ M+ GC+P++ Y+ L++G C++ ++ A+ EV K+ + YTT+++ +C
Sbjct: 291 LDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK-KTGLKLDTVGYTTLMNCFC 349
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
+ + EA L EM S + + T+N ++ G G + AL + + G +
Sbjct: 350 RNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKG 409
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
++ ++ C G++ + M+ R I T++ L+ LC+S + +L
Sbjct: 410 SYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGF 469
Query: 422 KRTDIVPQPSIYNHVIDGYCK 442
R ++P P + V++ CK
Sbjct: 470 LRIGLIPGPKSWGAVVESICK 490
>AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:8017771-8019459 REVERSE
LENGTH=562
Length = 562
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/454 (24%), Positives = 202/454 (44%), Gaps = 49/454 (10%)
Query: 79 LTPSLVLEVVKRLNNPI-LGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLY 137
+T SLVL+V++R +N + FF + + HS TYN ++ +L
Sbjct: 130 VTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMV------------DVLG 177
Query: 138 DCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV---L 194
C FD + EL+ E N+ + V D + V L
Sbjct: 178 KCRNFD-----------------------LMWELVNEMNKNE-ESKLVTLDTMSKVMRRL 213
Query: 195 VKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC-SP 252
K K + A+ F E+ +S+ +T N LM L ++ A + ++ F P
Sbjct: 214 AKSGKYNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVF--LKLFDTIKP 271
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
D T+N L+HG C+ ++ D AR ++ + + ++F+P+V +YT+ + YCK + + +
Sbjct: 272 DARTFNILIHGFCKARKFDDARAMMDLMKV-TEFTPDVVTYTSFVEAYCKEGDFRRVNEM 330
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
+EM +G PN T+ ++ K + ALG+Y+KM GC PD ++SLI +
Sbjct: 331 LEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSK 390
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD---IVPQ 429
G+ +++ +M + + + ++ +IS +R + A LL++++ + P
Sbjct: 391 TGRFKDAAEIFEDMTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPN 450
Query: 430 PSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
Y ++ C + ++ M + D T+ +LI G CM G+ +A + F
Sbjct: 451 VETYAPLLKMCCHKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFE 510
Query: 489 KMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
+ + G P + T ++L L K M +I+
Sbjct: 511 EAVRKGMVPRDSTCKMLVDELEKKNMAEAKLKIQ 544
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 42/279 (15%)
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP--NVRSYTTVISGYCKLSKMKEASSLF 313
TYN ++ L + + D +L+ E+ K++ S + + + V+ K K +A F
Sbjct: 168 TYNAMVDVLGKCRNFDLMWELVNEMN-KNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAF 226
Query: 314 DEMDRS-GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
EM++S G K + NSL+D VK +++ A ++ K LF PD
Sbjct: 227 LEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLK-LFDTIKPDA------------ 273
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
TF++LI CK+ + +AR ++ +K T+ P
Sbjct: 274 -----------------------RTFNILIHGFCKARKFDDARAMMDLMKVTEFTPDVVT 310
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
Y ++ YCK G+ N ++ EM E C P+ T+TI++ + +A+ ++ KM
Sbjct: 311 YTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMK 370
Query: 492 ATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQG 530
GC PD L L K+G +AA I E + NQG
Sbjct: 371 EDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDM-TNQG 408
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 100/215 (46%), Gaps = 5/215 (2%)
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV--TFTSLIEGYCRVGK 375
++G + T+N+++D K N D + +M + V T + ++ + GK
Sbjct: 159 QTGYVHSGHTYNAMVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGK 218
Query: 376 VNYGLDLWHEMN-TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
N +D + EM + + + L+ L K N ++ A ++ +L T I P +N
Sbjct: 219 YNKAVDAFLEMEKSYGVKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDT-IKPDARTFN 277
Query: 435 HVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
+I G+CK+ D+A A++ M+ + PD T+T + +C +G + +M
Sbjct: 278 ILIHGFCKARKFDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMREN 337
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
GC+P+ +T I+ L KS EA + E + E+
Sbjct: 338 GCNPNVVTYTIVMHSLGKSKQVAEALGVYEKMKED 372
>AT2G26790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:11425270-11427669 REVERSE
LENGTH=799
Length = 799
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 190/394 (48%), Gaps = 10/394 (2%)
Query: 150 RLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRE 209
R+ G LV ++ + D + ++L +++ V+ + L++ + + K+ + LF++
Sbjct: 147 RVSGALVKAYVSLGMFDEATDVLFQSKRLDCVVDIKACNFLMNRMTEFGKIGMLMTLFKQ 206
Query: 210 LMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE 269
L + T+ +++ LC G+++EA L S + Y T ++GLC E
Sbjct: 207 LKQLGLCANEYTYAIVVKALCRKGNLEEAAMLLIENES------VFGYKTFINGLCVTGE 260
Query: 270 VDRARDLLKE-VGLKSKFSPNVRSYT-TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
++A L+ E + K ++R+ V+ G+C KMK A S+ EM+ G + +
Sbjct: 261 TEKAVALILELIDRKYLAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYA 320
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
++ID + K N+ ALG KML G + V + +++ YC++ L+ + E
Sbjct: 321 CLAVIDRYCKNMNLPEALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFR 380
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
NI ++V L K R++EA +LL+++K IVP Y +IDGYC G V
Sbjct: 381 DMNIFLDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVV 440
Query: 448 EANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILS 506
+A ++ EM PD T+ +L++G G + + I+ +M A G P+ +T ++
Sbjct: 441 DALDLIDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVII 500
Query: 507 SCLLKSGMPGEAARIKESLHENQGDSLKKSYYEG 540
L + EA SL + ++ K S+ +G
Sbjct: 501 EGLCFARKVKEAEDFFSSLEQKCPEN-KASFVKG 533
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 195/458 (42%), Gaps = 62/458 (13%)
Query: 115 WTYNMLLRSLCQKG-LHSSAKLLYD--------------CMRFDGKLPDSRLLGFLVSSF 159
+TY +++++LC+KG L +A LL + C+ + + + +L + +
Sbjct: 217 YTYAIVVKALCRKGNLEEAAMLLIENESVFGYKTFINGLCVTGETEKAVALILELIDRKY 276
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAV---------------VYDNLLSV--LVKHNKLDD 202
D L ++ CN++++ A VY L + K+ L +
Sbjct: 277 LAGDDLRAVLGMVVRGFCNEMKMKAAESVIIEMEEIGFGLDVYACLAVIDRYCKNMNLPE 336
Query: 203 AICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH 262
A+ +++ + ++++ C EA + R D V YN
Sbjct: 337 ALGFLDKMLGKGLKVNCVIVSLILQCYCKMDMCLEALEKFKEFRDMNIFLDRVCYNVAFD 396
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
L ++ V+ A +LL+E+ + P+V +YTT+I GYC K+ +A L DEM +G
Sbjct: 397 ALSKLGRVEEAFELLQEMKDRG-IVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMS 455
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P+ T+N L+ G + G+ + L IY++M G P+ VT + +IEG C KV D
Sbjct: 456 PDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDF 515
Query: 383 WHEMNTR---------------NISASLHTFSVLISY-------------LCKSNRLQEA 414
+ + + +S + V + Y LC L++A
Sbjct: 516 FSSLEQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKA 575
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAG 473
D+L+++ + P S+ +I +CK NV EA + M E+ PD FT+TI+I
Sbjct: 576 HDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHT 635
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLK 511
+C A +F M G PD +T +L LK
Sbjct: 636 YCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLK 673
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 159/392 (40%), Gaps = 77/392 (19%)
Query: 164 RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFN 223
R++ + ELL E + + + + Y L+ K+ DA+ L E++ + + T+N
Sbjct: 403 RVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDLIDEMIGNGMSPDLITYN 462
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK----- 278
VL+ GL G +E + M++ G P+ VT + ++ GLC ++V A D
Sbjct: 463 VLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSLEQK 522
Query: 279 -------------EVGLKSK---------------------FSPNVRSYTT--------- 295
E GL K FS + Y
Sbjct: 523 CPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVLKKM 582
Query: 296 --------------VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+I +CKL+ ++EA LFD M G P+ FT+ +I + ++ +
Sbjct: 583 SAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRLNEL 642
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCR--------------VGKVNYGLDLWHEMN 387
A +++ M G PDVVT+T L++ Y + VGK ++ E +
Sbjct: 643 QKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPEHHETCSVQGEVGK-RKASEVLREFS 701
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
I + ++VLI CK N L++A +L ++ + + P Y +I Y + G +D
Sbjct: 702 AAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYFRKGYID 761
Query: 448 EANAIVVEMEEKCKPDKFTFTILIAGHCMKGR 479
A +V E+ +K +F + +K +
Sbjct: 762 MAVTLVTELSKKYNIPSESFEAAVKSAALKAK 793
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 151/381 (39%), Gaps = 57/381 (14%)
Query: 182 VNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKF 241
++ V Y+ L K ++++A L +E+ + + L+ G C G V +A
Sbjct: 386 LDRVCYNVAFDALSKLGRVEEAFELLQEMKDRGIVPDVINYTTLIDGYCLQGKVVDALDL 445
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCR---IKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS 298
++ M G SPD++TYN L+ GL R +EV + +K G K PN + + +I
Sbjct: 446 IDEMIGNGMSPDLITYNVLVSGLARNGHEEEVLEIYERMKAEGPK----PNAVTNSVIIE 501
Query: 299 GYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV-------------------- 338
G C K+KEA F +++ + A S + G+ +
Sbjct: 502 GLCFARKVKEAEDFFSSLEQKCPENKA----SFVKGYCEAGLSKKAYKAFVRLEYPLRKS 557
Query: 339 ------------GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
G ++ A + KKM + P +I +C++ V L+ M
Sbjct: 558 VYIKLFFSLCIEGYLEKAHDVLKKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTM 617
Query: 387 NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK---- 442
R + L T++++I C+ N LQ+A L +K+ I P Y ++D Y K
Sbjct: 618 VERGLIPDLFTYTIMIHTYCRLNELQKAESLFEDMKQRGIKPDVVTYTVLLDRYLKLDPE 677
Query: 443 -------SGNVDEANAIVVEMEEKCKP---DKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
G V + A V E D +T+LI C A +F +M+
Sbjct: 678 HHETCSVQGEVGKRKASEVLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMID 737
Query: 493 TGCSPDEITVRILSSCLLKSG 513
+G PD + L S + G
Sbjct: 738 SGLEPDMVAYTTLISSYFRKG 758
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 151/341 (44%), Gaps = 48/341 (14%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA-- 173
TYN+L+ L + G +Y+ M+ +G P++ ++ ++ +++ +
Sbjct: 460 TYNVLVSGLARNGHEEEVLEIYERMKAEGPKPNAVTNSVIIEGLCFARKVKEAEDFFSSL 519
Query: 174 EAQCNKVQVNAV--------------VYDNLLSVLVK--HNKLDDAICLFRELMRSHSHL 217
E +C + + + V + L L K + KL ++C+ L ++H L
Sbjct: 520 EQKCPENKASFVKGYCEAGLSKKAYKAFVRLEYPLRKSVYIKLFFSLCIEGYLEKAHDVL 579
Query: 218 ET-STFNV---------LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI 267
+ S + V ++G C +V EA + M G PD+ TY ++H CR+
Sbjct: 580 KKMSAYRVEPGRSMCGKMIGAFCKLNNVREAQVLFDTMVERGLIPDLFTYTIMIHTYCRL 639
Query: 268 KEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSK-------------MKEASS 311
E+ +A L +K+ G+K P+V +YT ++ Y KL ++AS
Sbjct: 640 NELQKAESLFEDMKQRGIK----PDVVTYTVLLDRYLKLDPEHHETCSVQGEVGKRKASE 695
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+ E +G + + LID K+ N++ A ++ +M+ G PD+V +T+LI Y
Sbjct: 696 VLREFSAAGIGLDVVCYTVLIDRQCKMNNLEQAAELFDRMIDSGLEPDMVAYTTLISSYF 755
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
R G ++ + L E++ + S + + S K+ R Q
Sbjct: 756 RKGYIDMAVTLVTELSKKYNIPSESFEAAVKSAALKAKRFQ 796
>AT5G11310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:3606490-3608409 FORWARD
LENGTH=602
Length = 602
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 183/409 (44%), Gaps = 18/409 (4%)
Query: 129 LHSSAKLLYDCMRFDGKLP----DSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNA 184
L SS LL+ ++ P L +V+S +++ L+ + + N
Sbjct: 111 LSSSPMLLHSVFKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNL 170
Query: 185 VVYDNLLSVLVKHNK---LDDAICLFRELMRSH-----SHLETSTFNVLMGGLCSAGDVD 236
V D + ++ ++ + + AI F E RS+ S E VL+ LC G V
Sbjct: 171 VSADTFIVLIRRYARAGMVQQAIRAF-EFARSYEPVCKSATELRLLEVLLDALCKEGHVR 229
Query: 237 EAFKFLN---GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
EA +L G P + +N LL+G R +++ +A L +E+ + P V +Y
Sbjct: 230 EASMYLERIGGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMN-VKPTVVTY 288
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
T+I GYC++ +++ A + +EM + + N FN +IDG + G + ALG+ ++
Sbjct: 289 GTLIEGYCRMRRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFV 348
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
P +VT+ SL++ +C+ G + + M TR + + T++ Y K N+ +E
Sbjct: 349 CESGPTIVTYNSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEE 408
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIA 472
+L +L P Y+ ++ C+ G + A + EM+ + PD T T+LI
Sbjct: 409 GMNLYFKLIEAGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIH 468
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
C +A F + G P IT +++ + L GM A R+
Sbjct: 469 LLCRLEMLEEAFEEFDNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRL 517
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 75/332 (22%), Positives = 156/332 (46%), Gaps = 15/332 (4%)
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL-NGMRSFGCSPDIVTYNTLLHGLCRIKE 269
M+ L S F+ ++ LC A + + A+ + + +RS S ++V+ +T + + R
Sbjct: 127 MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGS-NLVSADTFIVLIRRYAR 185
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYT------TVISGYCKLSKMKEASSLFDE----MDRS 319
+ ++ + P +S T ++ CK ++EAS + MD S
Sbjct: 186 AGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREASMYLERIGGTMD-S 244
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
P+ FN L++G+ + + A ++++M P VVT+ +LIEGYCR+ +V
Sbjct: 245 NWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIA 304
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+++ EM + + F+ +I L ++ RL EA ++ + + P YN ++
Sbjct: 305 MEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKN 364
Query: 440 YCKSGNVDEANAIV-VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+CK+G++ A+ I+ + M P T+ + + + +++K++ G SPD
Sbjct: 365 FCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSPD 424
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHENQG 530
+T ++ L + G A ++ + + +N+G
Sbjct: 425 RLTYHLILKMLCEDGKLSLAMQVNKEM-KNRG 455
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S +N+LL + A+ L++ M+ P G L+ + + R+ ++ E+L
Sbjct: 249 SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQIAMEVL 308
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E + ++++N +V++ ++ L + +L +A+ + S T+N L+ C A
Sbjct: 309 EEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVKNFCKA 368
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
GD+ A K L M + G P TYN + + + +L ++ +++ SP+ +
Sbjct: 369 GDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKL-IEAGHSPDRLT 427
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y ++ C+ K+ A + EM G P+ T LI ++ ++ A + +
Sbjct: 428 YHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEFDNAV 487
Query: 353 FHGCPPDVVTFTSLIEG 369
G P +TF + G
Sbjct: 488 RRGIIPQYITFKMIDNG 504
>AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:20459238-20461504 FORWARD
LENGTH=723
Length = 723
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 171/399 (42%), Gaps = 10/399 (2%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN + L + A +Y+ M PD+ L+++ R + E
Sbjct: 276 YNAAISGLSASQRYDDAWEVYEAMDKINVYPDNVTCAILITTLRKAGRSAKEVWEIFEKM 335
Query: 177 CNK-VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
K V+ + V+ L+ ++A+ + E+ + T +N LM + +
Sbjct: 336 SEKGVKWSQDVFGGLVKSFCDEGLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHI 395
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV---GLKSKFSPNVRS 292
+E MR G P TYN L+ R + D LL+E+ GL+ PNV+S
Sbjct: 396 EEVEGLFTEMRDKGLKPSAATYNILMDAYARRMQPDIVETLLREMEDLGLE----PNVKS 451
Query: 293 YTTVISGYCKLSKMKE-ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
YT +IS Y + KM + A+ F M + G KP++ ++ +LI + G + A +++M
Sbjct: 452 YTCLISAYGRTKKMSDMAADAFLRMKKVGLKPSSHSYTALIHAYSVSGWHEKAYASFEEM 511
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
G P V T+TS+++ + R G +++W M I + T++ L+ K
Sbjct: 512 CKEGIKPSVETYTSVLDAFRRSGDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLY 571
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTIL 470
EARD++ + + + P YN +++ Y + G + ++ EM KPD T++ +
Sbjct: 572 IEARDVVSEFSKMGLQPSVMTYNMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTM 631
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
I A M+ +G PD + L + L
Sbjct: 632 IYAFVRVRDFKRAFFYHKMMVKSGQVPDPRSYEKLRAIL 670
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/414 (24%), Positives = 171/414 (41%), Gaps = 60/414 (14%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDC---MRFDGKLPDSRLLGFLVSSFALV 162
+K+NV+ T +L+ +L + G SAK +++ M G + G LV SF
Sbjct: 300 DKINVYPDNVTCAILITTLRKAG--RSAKEVWEIFEKMSEKGVKWSQDVFGGLVKSFCDE 357
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+ + + E + ++ N +VY+ L+ K N +++ LF E+ +T+
Sbjct: 358 GLKEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATY 417
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV-DRARDL---LK 278
N+LM D L M G P++ +Y L+ R K++ D A D +K
Sbjct: 418 NILMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMK 477
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP---------NAF--- 326
+VGLK P+ SYT +I Y ++A + F+EM + G KP +AF
Sbjct: 478 KVGLK----PSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRS 533
Query: 327 -----------------------TFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTF 363
T+N+L+DGF K G A + + G P V+T+
Sbjct: 534 GDTGKLMEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEARDVVSEFSKMGLQPSVMTY 593
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
L+ Y R G+ L EM N+ T+S +I + + A + + +
Sbjct: 594 NMLMNAYARGGQDAKLPQLLKEMAALNLKPDSITYSTMIYAFVRVRDFKRAFFYHKMMVK 653
Query: 424 TDIVPQPSIYNH---VIDGYCKSGNVDEANAIV---------VEMEEKCKPDKF 465
+ VP P Y +++ K+ N + AI+ V+ + K K D+F
Sbjct: 654 SGQVPDPRSYEKLRAILEDKAKTKNRKDKTAILGIINSKFGRVKAKTKGKKDEF 707
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/335 (23%), Positives = 147/335 (43%), Gaps = 10/335 (2%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
L ++L + D + L L + +N + GL ++ D+A++ M
Sbjct: 244 LFTLLGRERMADYILLLLSNLPDKEEFRDVRLYNAAISGLSASQRYDDAWEVYEAMDKIN 303
Query: 250 CSPDIVTYNTLLHGLCR----IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
PD VT L+ L + KEV + + E G+ K+S +V + ++ +C
Sbjct: 304 VYPDNVTCAILITTLRKAGRSAKEVWEIFEKMSEKGV--KWSQDV--FGGLVKSFCDEGL 359
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+EA + EM++ G + N +N+L+D + K +++ G++ +M G P T+
Sbjct: 360 KEEALVIQTEMEKKGIRSNTIVYNTLMDAYNKSNHIEEVEGLFTEMRDKGLKPSAATYNI 419
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE-ARDLLRQLKRT 424
L++ Y R + + L EM + ++ +++ LIS ++ ++ + A D ++K+
Sbjct: 420 LMDAYARRMQPDIVETLLREMEDLGLEPNVKSYTCLISAYGRTKKMSDMAADAFLRMKKV 479
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDA 483
+ P Y +I Y SG ++A A EM +E KP T+T ++ G
Sbjct: 480 GLKPSSHSYTALIHAYSVSGWHEKAYASFEEMCKEGIKPSVETYTSVLDAFRRSGDTGKL 539
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+ I+ ML IT L K G+ EA
Sbjct: 540 MEIWKLMLREKIKGTRITYNTLLDGFAKQGLYIEA 574
>AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:18941118-18942524 FORWARD
LENGTH=468
Length = 468
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/402 (25%), Positives = 180/402 (44%), Gaps = 48/402 (11%)
Query: 118 NMLLRSLCQ-KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
N+ + SLC+ + L + LL D +R G LPD L+ + +D + + +
Sbjct: 17 NISVNSLCKFRNLERAETLLIDGIRL-GVLPDVITYNTLIKGYTRFIGIDEAYAVTRRMR 75
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
++ + Y++L+S K+ L+ + LF E++ S + ++N LM G
Sbjct: 76 EAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHG 135
Query: 237 EAFKFLN-GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EAFK L+ + G P I TYN LL LC+ D A +L K LKS+ P + +Y
Sbjct: 136 EAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKH--LKSRVKPELMTYNI 193
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+G CK ++ + E+ +SG PNA T+ +++ + K ++ L ++ KM G
Sbjct: 194 LINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMKKEG 253
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM---NTRNISASLHTFSVLISYLCKSNRLQ 412
D +++ + G+ + HE+ TR S + +++ L++ K L
Sbjct: 254 YTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTR--SQDIVSYNTLLNLYFKDGNLD 311
Query: 413 EARDLLRQLKRTDIVP---------------------------------QPSIY--NHVI 437
DLL +++ + P QPS+ N +I
Sbjct: 312 AVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLI 371
Query: 438 DGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGR 479
DG CK+G+VD A + ME + D+FT+T ++ C GR
Sbjct: 372 DGLCKAGHVDRAMRLFASMEVR---DEFTYTSVVHNLCKDGR 410
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 180/389 (46%), Gaps = 5/389 (1%)
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
M+F G ++LL V+S L+ ++ LL + V + + Y+ L+ +
Sbjct: 6 MKFPG--ISTKLLNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIKGYTRFIG 63
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
+D+A + R + + + +T+N L+ G ++ + + M G SPD+ +YNT
Sbjct: 64 IDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNT 123
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L+ ++ A +L E + P + +Y ++ CK A LF + +S
Sbjct: 124 LMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KS 182
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
KP T+N LI+G K + S + +++ G P+ VT+T++++ Y + ++ G
Sbjct: 183 RVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKG 242
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI-YNHVID 438
L L+ +M + ++S L K+ R +EA + + +L R+ Q + YN +++
Sbjct: 243 LQLFLKMKKEGYTFDGFANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLN 302
Query: 439 GYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
Y K GN+D + ++ E+E K KPD +T TI++ G G A + G P
Sbjct: 303 LYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQP 362
Query: 498 DEITVRILSSCLLKSGMPGEAARIKESLH 526
+T L L K+G A R+ S+
Sbjct: 363 SVVTCNCLIDGLCKAGHVDRAMRLFASME 391
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 113/229 (49%), Gaps = 7/229 (3%)
Query: 274 RDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
R L+K G+ +K ++ CK ++ A +L + R G P+ T+N+LI
Sbjct: 3 RGLMKFPGISTKL------LNISVNSLCKFRNLERAETLLIDGIRLGVLPDVITYNTLIK 56
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
G+ + +D A + ++M G PDV T+ SLI G + +N L L+ EM +S
Sbjct: 57 GYTRFIGIDEAYAVTRRMREAGIEPDVTTYNSLISGAAKNLMLNRVLQLFDEMLHSGLSP 116
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQ-LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
+ +++ L+S K R EA +L + + +VP YN ++D CKSG+ D A +
Sbjct: 117 DMWSYNTLMSCYFKLGRHGEAFKILHEDIHLAGLVPGIDTYNILLDALCKSGHTDNAIEL 176
Query: 453 VVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
++ + KP+ T+ ILI G C R + ++ +G +P+ +T
Sbjct: 177 FKHLKSRVKPELMTYNILINGLCKSRRVGSVDWMMRELKKSGYTPNAVT 225
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 16/337 (4%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ + + + L+D M G PD L+S + + R + ++L E
Sbjct: 85 TYNSLISGAAKNLMLNRVLQLFDEMLHSGLSPDMWSYNTLMSCYFKLGRHGEAFKILHE- 143
Query: 176 QCNKVQVNAVV-----YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
+ + +V Y+ LL L K D+AI LF+ L +S E T+N+L+ GLC
Sbjct: 144 ---DIHLAGLVPGIDTYNILLDALCKSGHTDNAIELFKHL-KSRVKPELMTYNILINGLC 199
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
+ V + ++ G +P+ VTY T+L + K +++ L ++ K ++ +
Sbjct: 200 KSRRVGSVDWMMRELKKSGYTPNAVTYTTMLKMYFKTKRIEKGLQLFLKMK-KEGYTFDG 258
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP-NAFTFNSLIDGFVKVGNMDSALGIYK 349
+ V+S K + +EA E+ RSGT+ + ++N+L++ + K GN+D+ + +
Sbjct: 259 FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQDIVSYNTLLNLYFKDGNLDAVDDLLE 318
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
++ G PD T T ++ G +G + + S+ T + LI LCK+
Sbjct: 319 EIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACIGEMGMQPSVVTCNCLIDGLCKAG 378
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNV 446
+ A L ++ V Y V+ CK G +
Sbjct: 379 HVDRAMRLFASME----VRDEFTYTSVVHNLCKDGRL 411
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 9/210 (4%)
Query: 126 QKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAV 185
+KGL K+ + FDG + ++ L+ + + + EL+ ++ + V
Sbjct: 240 EKGLQLFLKMKKEGYTFDG-FANCAVVSALIKTGRAEEAYECMHELVRSGTRSQ---DIV 295
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
Y+ LL++ K LD L E+ + T +++ GL + G+ A K L +
Sbjct: 296 SYNTLLNLYFKDGNLDAVDDLLEEIEMKGLKPDDYTHTIIVNGLLNIGNTGGAEKHLACI 355
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
G P +VT N L+ GLC+ VDRA L + ++ +F+ YT+V+ CK +
Sbjct: 356 GEMGMQPSVVTCNCLIDGLCKAGHVDRAMRLFASMEVRDEFT-----YTSVVHNLCKDGR 410
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
+ AS L G K + +++ G
Sbjct: 411 LVCASKLLLSCYNKGMKIPSSARRAVLSGI 440
>AT3G18020.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6165449-6167515 FORWARD
LENGTH=688
Length = 688
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/456 (22%), Positives = 199/456 (43%), Gaps = 44/456 (9%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE- 174
T+ L+ C+ A ++D MR G P+S L L+ F + ++ ++L+ E
Sbjct: 199 TFTTLIGGYCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKEL 258
Query: 175 ----------------------AQCNKVQVNAV--VYDNL-----LSVLVKHNKLDDAIC 205
+ C + N + + +N+ ++V + + D++C
Sbjct: 259 WEYMKNETDTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLC 318
Query: 206 LFRE---------LMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
+R +M+S +++N ++ GLC G A++ L F P
Sbjct: 319 RYRRNHGAARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEY 378
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
TY L+ LC+ + +AR++L E+ L+ + + R Y + G C + E ++
Sbjct: 379 TYKLLMESLCKELDTGKARNVL-ELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVS 437
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG-CPPDVVTFTSLIEGYCRVG 374
M + +P+ +T N++I+G K+G +D A+ + M+ C PD VT +++ G G
Sbjct: 438 MLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDMMTGKFCAPDAVTLNTVMCGLLAQG 497
Query: 375 KVNYGLDLWHEMNTRN-ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
+ LD+ + + N I + ++ +I L K ++ EA + QL++ + + Y
Sbjct: 498 RAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGDEAMSVFGQLEKASVTADSTTY 557
Query: 434 NHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
+IDG C + VD A + + + D F + + G C G DA Y +
Sbjct: 558 AIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFLKGLCQSGYLSDACHFLYDLAD 617
Query: 493 TGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+G P+ + + + +SG+ EA +I E + +N
Sbjct: 618 SGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKN 653
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 187/417 (44%), Gaps = 28/417 (6%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFL----------VSSFALVDRLDVSK 169
++ SLC G A + G +PD R + VS+ ++ RL K
Sbjct: 96 VIHSLCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFK 155
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGG 228
+ + N Y+ L++ L ++ DA L + MR+ HL + TF L+GG
Sbjct: 156 KEFVPSLTN--------YNRLMNQLCTIYRVIDAHKLVFD-MRNRGHLPDVVTFTTLIGG 206
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG--LKSKF 286
C +++ A K + MR G P+ +T + L+ G ++++V+ R L+KE+ +K++
Sbjct: 207 YCEIRELEVAHKVFDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNET 266
Query: 287 SPNVRS--YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
++++ + ++ C+ + + + M + F + +ID + A
Sbjct: 267 DTSMKAAAFANLVDSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGA 326
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
I M G P ++ ++I G C+ G L E + S +T+ +L+
Sbjct: 327 ARIVYIMKSKGLKPRRTSYNAIIHGLCKDGGCMRAYQLLEEGSEFEFFPSEYTYKLLMES 386
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA-NAIVVEMEEKCKPD 463
LCK +AR++L + R + + IYN + G C N E N +V ++ C+PD
Sbjct: 387 LCKELDTGKARNVLELMLRKEGADRTRIYNIYLRGLCVMDNPTEILNVLVSMLQGDCRPD 446
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATG--CSPDEITVRILSSCLLKSGMPGEA 518
++T +I G C GR DA+ + M+ TG C+PD +T+ + LL G EA
Sbjct: 447 EYTLNTVINGLCKMGRVDDAMKVLDDMM-TGKFCAPDAVTLNTVMCGLLAQGRAEEA 502
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 164/373 (43%), Gaps = 9/373 (2%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQ-KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR 164
E +NV + Y ++ SLC+ + H +A+++Y M+ G P ++
Sbjct: 302 ESVNVE---FAYGHMIDSLCRYRRNHGAARIVY-IMKSKGLKPRRTSYNAIIHGLCKDGG 357
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
+ +LL E + + Y L+ L K A + ++R T +N+
Sbjct: 358 CMRAYQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGKARNVLELMLRKEGADRTRIYNI 417
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
+ GLC + E L M C PD T NT+++GLC++ VD A +L ++ +
Sbjct: 418 YLRGLCVMDNPTEILNVLVSMLQGDCRPDEYTLNTVINGLCKMGRVDDAMKVLDDM-MTG 476
Query: 285 KF-SPNVRSYTTVISGYCKLSKMKEASSLFDE-MDRSGTKPNAFTFNSLIDGFVKVGNMD 342
KF +P+ + TV+ G + +EA + + M + KP +N++I G K+ D
Sbjct: 477 KFCAPDAVTLNTVMCGLLAQGRAEEALDVLNRVMPENKIKPGVVAYNAVIRGLFKLHKGD 536
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A+ ++ ++ D T+ +I+G C KV+ W ++ + ++ +
Sbjct: 537 EAMSVFGQLEKASVTADSTTYAIIIDGLCVTNKVDMAKKFWDDVIWPSGRHDAFVYAAFL 596
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK- 461
LC+S L +A L L + +P YN VI +SG EA I+ EM + +
Sbjct: 597 KGLCQSGYLSDACHFLYDLADSGAIPNVVCYNTVIAECSRSGLKREAYQILEEMRKNGQA 656
Query: 462 PDKFTFTILIAGH 474
PD T+ IL H
Sbjct: 657 PDAVTWRILDKLH 669
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 15/320 (4%)
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE-VDRARDLLKEVGLKSKFS 287
LC AG DEA + + G PD T N ++ L + V + + +G K +F
Sbjct: 100 LCDAGRFDEAHRRFLLFLASGFIPDERTCNVIIARLLYSRSPVSTLGVIHRLIGFKKEFV 159
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P++ +Y +++ C + ++ +A L +M G P+ TF +LI G+ ++ ++ A +
Sbjct: 160 PSLTNYNRLMNQLCTIYRVIDAHKLVFDMRNRGHLPDVVTFTTLIGGYCEIRELEVAHKV 219
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL----DLWHEM-NTRNISASLHTFSVLI 402
+ +M G P+ +T + LI G+ ++ V G +LW M N + S F+ L+
Sbjct: 220 FDEMRVCGIRPNSLTLSVLIGGFLKMRDVETGRKLMKELWEYMKNETDTSMKAAAFANLV 279
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CK 461
+C+ + ++ + + V Y H+ID C+ A IV M+ K K
Sbjct: 280 DSMCREGYFNDIFEIAENMSLCESVNVEFAYGHMIDSLCRYRRNHGAARIVYIMKSKGLK 339
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS----PDEITVRILSSCLLKSGMPGE 517
P + ++ +I G C G A Y++L G P E T ++L L K G+
Sbjct: 340 PRRTSYNAIIHGLCKDGGCMRA----YQLLEEGSEFEFFPSEYTYKLLMESLCKELDTGK 395
Query: 518 AARIKESLHENQGDSLKKSY 537
A + E + +G + Y
Sbjct: 396 ARNVLELMLRKEGADRTRIY 415
>AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16166444-16168276 FORWARD
LENGTH=610
Length = 610
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 145/301 (48%), Gaps = 3/301 (0%)
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
++D ++ + R H T TFN+L C+ + E FL M G PD+VTYNT
Sbjct: 217 MEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNT 276
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L+ CR + A L K + + + P++ +YT++I G CK +++EA F M
Sbjct: 277 LVSSYCRRGRLKEAFYLYK-IMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDR 335
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G KP+ ++N+LI + K G M + + +ML + PD T ++EG+ R G++
Sbjct: 336 GIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGNSVVPDRFTCKVIVEGFVREGRLLSA 395
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLL-RQLKRTDIVPQPSIYNHVID 438
++ E+ + LI LC+ + A+ LL R ++ +P YN++I+
Sbjct: 396 VNFVVELRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPETYNNLIE 455
Query: 439 GYCKSGNVDEANAIVVEMEEKCKP-DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
+ ++EA + +++ + + D T+ LI C GR +A + +M + P
Sbjct: 456 SLSRCDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKP 515
Query: 498 D 498
D
Sbjct: 516 D 516
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 142/299 (47%), Gaps = 12/299 (4%)
Query: 189 NLLSVLVKHNKLDDAICLFRELMRS--HSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
L L++ + + +FR L+ + + + F++L+ G G V+E F+ +
Sbjct: 134 QFLCELIELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFREVL 193
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK--EVGLKSKFSPNVRSYTTVISGYCKLS 304
G S +VT N H L + ++D D + V + PN ++ + + +C S
Sbjct: 194 DSGFSVSVVTCN---HLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDS 250
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+E ++M+ G +P+ T+N+L+ + + G + A +YK M PD+VT+T
Sbjct: 251 NFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYT 310
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
SLI+G C+ G+V +H M R I +++ LI CK +Q+++ LL ++
Sbjct: 311 SLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKLLHEMLGN 370
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTI---LIAGHCMKGRA 480
+VP +++G+ + G + A VVE+ + K D F + LI C +G+
Sbjct: 371 SVVPDRFTCKVIVEGFVREGRLLSAVNFVVEL-RRLKVD-IPFEVCDFLIVSLCQEGKP 427
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 171/387 (44%), Gaps = 10/387 (2%)
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV 195
+Y M G P++ L + F + L + + + + V Y+ L+S
Sbjct: 223 VYSVMCRVGIHPNTYTFNILTNVFCNDSNFREVDDFLEKMEEEGFEPDLVTYNTLVSSYC 282
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
+ +L +A L++ + R + T+ L+ GLC G V EA + + M G PD +
Sbjct: 283 RRGRLKEAFYLYKIMYRRRVVPDLVTYTSLIKGLCKDGRVREAHQTFHRMVDRGIKPDCM 342
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
+YNTL++ C+ + +++ LL E+ L + P+ + ++ G+ + ++ A + E
Sbjct: 343 SYNTLIYAYCKEGMMQQSKKLLHEM-LGNSVVPDRFTCKVIVEGFVREGRLLSAVNFVVE 401
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF---HGCPPDVVTFTSLIEGYCR 372
+ R + LI + G +A + +++ H P+ T+ +LIE R
Sbjct: 402 LRRLKVDIPFEVCDFLIVSLCQEGKPFAAKHLLDRIIEEEGHEAKPE--TYNNLIESLSR 459
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
+ L L ++ +N T+ LI LC+ R +EA L+ ++ +++ P I
Sbjct: 460 CDAIEEALVLKGKLKNQNQVLDAKTYRALIGCLCRIGRNREAESLMAEMFDSEVKPDSFI 519
Query: 433 YNHVIDGYCKSGNVDEANAI--VVEMEEKCKPDKFTFTILIAGHCMKGRA-PDAIVIFYK 489
++ GYCK + D+A + + ME + D ++ L+ C G A+ + +
Sbjct: 520 CGALVYGYCKELDFDKAERLLSLFAMEFRIF-DPESYNSLVKAVCETGCGYKKALELQER 578
Query: 490 MLATGCSPDEITVRILSSCLLKSGMPG 516
M G P+ +T + L L + +P
Sbjct: 579 MQRLGFVPNRLTCKYLIQVLEQPSLPN 605
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 133/305 (43%), Gaps = 27/305 (8%)
Query: 233 GDVDEAFKFLNGMR-SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
D A F ++ G P++ Y LLH L K+ A L E+
Sbjct: 91 SDASRAITFFKWVKFDLGKRPNVGNYCLLLHILVSSKKFPLAMQFLCEL----------- 139
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN--AFTFNSLIDGFVKVGNMDSALGIYK 349
+L+ KE +F + + + N F+ L+ G++K+G ++ +++
Sbjct: 140 ---------IELTSKKEEVDVFRVLVSATDECNWDPVVFDMLVKGYLKLGLVEEGFRVFR 190
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
++L G VVT L+ G ++ + ++ M I + +TF++L + C +
Sbjct: 191 EVLDSGFSVSVVTCNHLLNGLLKLDLMEDCWQVYSVMCRVGIHPNTYTFNILTNVFCNDS 250
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFT 468
+E D L +++ P YN ++ YC+ G + EA + M + PD T+T
Sbjct: 251 NFREVDDFLEKMEEEGFEPDLVTYNTLVSSYCRRGRLKEAFYLYKIMYRRRVVPDLVTYT 310
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
LI G C GR +A F++M+ G PD ++ L K GM ++ ++ LHE
Sbjct: 311 SLIKGLCKDGRVREAHQTFHRMVDRGIKPDCMSYNTLIYAYCKEGMMQQSKKL---LHEM 367
Query: 529 QGDSL 533
G+S+
Sbjct: 368 LGNSV 372
>AT3G15200.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5117489-5119060 REVERSE
LENGTH=523
Length = 523
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 178/384 (46%), Gaps = 37/384 (9%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
++++Y+ +L VL K + ++ +F E+ + + T+ VL+ +A VDEA
Sbjct: 142 SSMLYNEILDVLGKMRRFEEFHQVFDEMSKRDGFVNEKTYEVLLNRYAAAHKVDEAVGVF 201
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
+ FG D+V ++ LL LCR K V+ A L + +F ++++ +++G+C
Sbjct: 202 ERRKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF--CSRRREFGCDIKAMNMILNGWCV 259
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
L + EA + ++ S +P+ ++ ++I+ K G + A+ +Y+ M PDV
Sbjct: 260 LGNVHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKI 319
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL- 421
++I+ C ++ L+++ E++ + ++ T++ L+ +LCK R ++ +L+ ++
Sbjct: 320 CNNVIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEME 379
Query: 422 -----------------------KRTDIVPQ----------PSIYNHVIDGYCKSGNVDE 448
K DIV + +YN + Y + ++
Sbjct: 380 LKGGSCSPNDVTFSYLLKYSQRSKDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 449 ANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
I EME PD+ T+TI I G KG+ +A+ F +M++ G P+ T +L+
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQ 499
Query: 508 CLLKSGMPGEAARIKESLHENQGD 531
K + + R + E++ D
Sbjct: 500 NKTKPRVEDKMLRSNLTSEESESD 523
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 140/298 (46%), Gaps = 5/298 (1%)
Query: 105 REKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR 164
R++ + ++ LL LC+ A+ L+ C R D + + +++ + ++
Sbjct: 204 RKEFGIDDDLVAFHGLLMWLCRYKHVEFAETLF-CSRRREFGCDIKAMNMILNGWCVLGN 262
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
+ +K + +K + + V Y +++ L K KL A+ L+R + + + + N
Sbjct: 263 VHEAKRFWKDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNN 322
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK- 283
++ LC + EA + + G P++VTYN+LL LC+I+ ++ +L++E+ LK
Sbjct: 323 VIDALCFKKRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKG 382
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
SPN +++ ++ Y + S K+ + + M ++ + + +N + +V+ +
Sbjct: 383 GSCSPNDVTFSYLLK-YSQRS--KDVDIVLERMAKNKCEMTSDLYNLMFRLYVQWDKEEK 439
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
I+ +M G PD T+T I G GK+ L + EM ++ + T +L
Sbjct: 440 VREIWSEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLL 497
>AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:15195663-15197156 FORWARD LENGTH=497
Length = 497
Score = 127 bits (320), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/430 (24%), Positives = 186/430 (43%), Gaps = 31/430 (7%)
Query: 95 ILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF 154
+LGF + L H+ F +N +A L D R D DS L +
Sbjct: 78 LLGFLRSKIRNHPLYAHYDFAVFNW------------AATL--DTFRHDH---DSFL--W 118
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNA---------VVYDNLLSVLVKHNKLDDAIC 205
+ S A R D LL+ N ++ ++ + + + K+D A+
Sbjct: 119 MSRSLAATHRFDDLYRLLSFVAANPCPCSSGIFSCPELEPIFRSAIDAYCRARKMDYALL 178
Query: 206 LFRELMR-SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGL 264
F + R +N ++ G +GD+D+A +F M PD+ T+N L++G
Sbjct: 179 AFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGY 238
Query: 265 CRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN 324
CR + D A DL +E+ K PNV S+ T+I G+ K++E + EM G + +
Sbjct: 239 CRSSKFDLALDLFREMKEKG-CEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFS 297
Query: 325 AFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH 384
T L+DG + G +D A G+ +L P + SL+E C K +++
Sbjct: 298 EATCEILVDGLCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMME 357
Query: 385 EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
E+ + + + L+ L KS R ++A + ++ I+P +N ++ C S
Sbjct: 358 ELWKKGQTPCFIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSD 417
Query: 445 NVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
+ +AN + + K +PD+ T+ +L++G +GR + V+ +ML PD T
Sbjct: 418 HSTDANRLRLLASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYN 477
Query: 504 ILSSCLLKSG 513
L L +G
Sbjct: 478 RLMDGLSCTG 487
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 128/276 (46%), Gaps = 1/276 (0%)
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMK 307
F C + + + CR +++D A + PNV Y TV++GY K M
Sbjct: 151 FSCPELEPIFRSAIDAYCRARKMDYALLAFDTMKRLIDGKPNVGVYNTVVNGYVKSGDMD 210
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
+A + M + KP+ TFN LI+G+ + D AL ++++M GC P+VV+F +LI
Sbjct: 211 KALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALDLFREMKEKGCEPNVVSFNTLI 270
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
G+ GK+ G+ + +EM S T +L+ LC+ R+ +A L+ L ++
Sbjct: 271 RGFLSSGKIEEGVKMAYEMIELGCRFSEATCEILVDGLCREGRVDDACGLVLDLLNKRVL 330
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVI 486
P Y +++ C A ++ E+ +K + P T L+ G GR A
Sbjct: 331 PSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPCFIACTTLVEGLRKSGRTEKASGF 390
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIK 522
KM+ G PD +T +L L S +A R++
Sbjct: 391 MEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLR 426
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 138/301 (45%), Gaps = 4/301 (1%)
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
+ N VY+ +++ VK +D A+ ++ + + + + TFN+L+ G C + D A
Sbjct: 190 KPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGYCRSSKFDLALD 249
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE-VGLKSKFSPNVRSYTTVISG 299
M+ GC P++V++NTL+ G +++ + E + L +FS + ++ G
Sbjct: 250 LFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIELGCRFSEA--TCEILVDG 307
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
C+ ++ +A L ++ P+ F + SL++ A+ + +++ G P
Sbjct: 308 LCREGRVDDACGLVLDLLNKRVLPSEFDYGSLVEKLCGENKAVRAMEMMEELWKKGQTPC 367
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
+ T+L+EG + G+ +M I TF++L+ LC S+ +A L
Sbjct: 368 FIACTTLVEGLRKSGRTEKASGFMEKMMNAGILPDSVTFNLLLRDLCSSDHSTDANRLRL 427
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKG 478
P + Y+ ++ G+ K G E +V EM +K PD FT+ L+ G G
Sbjct: 428 LASSKGYEPDETTYHVLVSGFTKEGRRKEGEVLVNEMLDKDMLPDIFTYNRLMDGLSCTG 487
Query: 479 R 479
+
Sbjct: 488 K 488
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 35/173 (20%)
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
CP F S I+ YCR K++Y L A
Sbjct: 153 CPELEPIFRSAIDAYCRARKMDYAL--------------------------------LAF 180
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGH 474
D +++L D P +YN V++GY KSG++D+A M +E+ KPD TF ILI G+
Sbjct: 181 DTMKRL--IDGKPNVGVYNTVVNGYVKSGDMDKALRFYQRMGKERAKPDVCTFNILINGY 238
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
C + A+ +F +M GC P+ ++ L L SG E ++ + E
Sbjct: 239 CRSSKFDLALDLFREMKEKGCEPNVVSFNTLIRGFLSSGKIEEGVKMAYEMIE 291
>AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810072 REVERSE
LENGTH=613
Length = 613
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 186/398 (46%), Gaps = 7/398 (1%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N+L+ + QK + A+ LY + +P L+ ++ + ++ ++ +L E Q
Sbjct: 180 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 239
Query: 177 CNKVQ---VNAVVYDNLLSVLVKH-NKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ V + VY+ + L+K ++AI +F+ + R T T+N+++ A
Sbjct: 240 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 299
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
++K MRS C P+I TY L++ R ++A ++ +++ + P+V
Sbjct: 300 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQ-EDGLEPDVYV 358
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y ++ Y + A+ +F M G +P+ ++N ++D + + G A ++++M
Sbjct: 359 YNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEEMK 418
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P + + L+ Y + V + EM+ + + +++ + +
Sbjct: 419 RLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQFT 478
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+ +L +++ S YN +I+ Y K+G ++ + VE++EK +PD T+T I
Sbjct: 479 KMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWTSRI 538
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRI-LSSC 508
+ K + +F +M+ +GC+PD T ++ LS+C
Sbjct: 539 GAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 576
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 111/248 (44%), Gaps = 5/248 (2%)
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
KS F P+V + +I Y + + KEA SL+ ++ S P T+ LI + G ++
Sbjct: 170 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 229
Query: 343 SALGIYKKMLFHGCPPD---VVTFTSLIEGYC-RVGKVNYGLDLWHEMNTRNISASLHTF 398
A + +M H P V + + IEG R G +D++ M + T+
Sbjct: 230 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 289
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+++I+ K+++ + L +++ P Y +++ + + G ++A I +++E
Sbjct: 290 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 349
Query: 459 K-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGE 517
+PD + + L+ + G A IF M GC PD + I+ ++G+ +
Sbjct: 350 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 409
Query: 518 AARIKESL 525
A + E +
Sbjct: 410 AEAVFEEM 417
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 92/220 (41%), Gaps = 1/220 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ YN L+ S + G A ++ M+ G PD +V ++ ++ + E
Sbjct: 357 YVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE 416
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + LLS K + + +E+ + +T N ++ G
Sbjct: 417 MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 476
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ K L M + C+ DI TYN L++ + ++R +L E+ K+ F P+V ++T
Sbjct: 477 FTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN-FRPDVVTWT 535
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+ I Y + + +F+EM SG P+ T L+
Sbjct: 536 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSA 575
>AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=574
Length = 574
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 146/305 (47%), Gaps = 9/305 (2%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR-DLLKE 279
TFNVL+ C V+EA++ + M G PD VTYNT+ + E RA +++++
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ +K K PN R+ V+ GYC+ ++++ M + N FNSLI+GFV+V
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
+ D + M DV+T+++++ + G + ++ EM + H +S
Sbjct: 310 DRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYS 369
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+L ++ ++A +LL L + P I+ VI G+C +G++D+A + +M
Sbjct: 370 ILAKGYVRAKEPKKAEELLETLI-VESRPNVVIFTTVISGWCSNGSMDDAMRVFNKM--- 425
Query: 460 CK----PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
CK P+ TF L+ G+ + A + M G P+ T +L+ +G+
Sbjct: 426 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLT 485
Query: 516 GEAAR 520
E+ +
Sbjct: 486 DESNK 490
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 6/209 (2%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P++ SYTT+++ + SS+ E+++SGTK ++ FN++I+ F + GNM+ A+
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG---LDLWHEMNTRNISASLHTFSVLISY 404
KM G P T+ +LI+GY GK LDL E ++ ++ TF+VL+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE---MEEKCK 461
CK +++EA +++++++ + P YN + Y + G A + VVE M+EK K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK 257
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
P+ T I++ G+C +GR D + +M
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/363 (20%), Positives = 163/363 (44%), Gaps = 46/363 (12%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL---PDSRLLGFLVSSFALV 162
++L ++ + TYN L++ G + L D M +G + P+ R LV ++
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKL--DDAICLFRELMRSHSHLETS 220
+++ + E++ + + V+ + V Y+ + + V+ + ++ + + +M+ +
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE---VDRARDLL 277
T +++GG C G V + +F+ M+ ++V +N+L++G + + +D L+
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVLTLM 321
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
KE +K+ +V +Y+TV++ + M++A+ +F EM ++G KP+A ++ L G+V+
Sbjct: 322 KECNVKA----DVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVR 377
Query: 338 V----------------------------------GNMDSALGIYKKMLFHGCPPDVVTF 363
G+MD A+ ++ KM G P++ TF
Sbjct: 378 AKEPKKAEELLETLIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTF 437
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
+L+ GY V + ++ M + TF +L + E+ + LK
Sbjct: 438 ETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKC 497
Query: 424 TDI 426
DI
Sbjct: 498 KDI 500
>AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29087145-29088521 FORWARD
LENGTH=458
Length = 458
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 132/279 (47%), Gaps = 18/279 (6%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH---LETSTFNVLMGGLCSAGDVDEAF 239
N + ++ +L K N R++ R + + T++ LM L G V EA
Sbjct: 126 NEITCRDMACLLAKGNDFKGLWDFLRQVSRRENGKNVVTTASITCLMKCLGEEGFVKEAL 185
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS-KFSPNVRSYTTVIS 298
M+ + C PD+ YNT+++ LCR+ +AR LL ++ L ++ P+ +YT +IS
Sbjct: 186 ATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILIS 245
Query: 299 GYCKLS-----------KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
YC+ +M EA+ +F EM G P+ T+N LIDG K + AL +
Sbjct: 246 SYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKTNRIGRALEL 305
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT--RNISASLHTFSVLISYL 405
++ M GC P+ VT+ S I Y ++ +++ M + S T++ LI L
Sbjct: 306 FEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGS-STYTPLIHAL 364
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
++ R EARDL+ ++ +VP+ Y V D G
Sbjct: 365 VETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 93/227 (40%), Gaps = 26/227 (11%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDG--KLPDSRLLGFLVSSFALVDRLDVSKELL 172
+ YN ++ +LC+ G A+ L D M+ G PD+ L+SS+
Sbjct: 201 YAYNTIINALCRVGNFKKARFLLDQMQLPGFRYPPDTYTYTILISSYCRYG--------- 251
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ C K ++ +A +FRE++ + T+N L+ G C
Sbjct: 252 MQTGCRK---------------AIRRRMWEANRMFREMLFRGFVPDVVTYNCLIDGCCKT 296
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
+ A + M++ GC P+ VTYN+ + E++ A ++++ + P +
Sbjct: 297 NRIGRALELFEDMKTKGCVPNQVTYNSFIRYYSVTNEIEGAIEMMRTMKKLGHGVPGSST 356
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
YT +I + + EA L EM +G P +T+ + D G
Sbjct: 357 YTPLIHALVETRRAAEARDLVVEMVEAGLVPREYTYKLVCDALSSEG 403
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 69/155 (44%), Gaps = 14/155 (9%)
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
+ T L++ G V L ++ M + ++ ++ +I+ LC+ ++AR LL Q
Sbjct: 166 ASITCLMKCLGEEGFVKEALATFYRMKEYHCKPDVYAYNTIINALCRVGNFKKARFLLDQ 225
Query: 421 LKRTDIVPQPSIYNH--VIDGYCKSG-----------NVDEANAIVVEMEEKC-KPDKFT 466
++ P Y + +I YC+ G + EAN + EM + PD T
Sbjct: 226 MQLPGFRYPPDTYTYTILISSYCRYGMQTGCRKAIRRRMWEANRMFREMLFRGFVPDVVT 285
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ LI G C R A+ +F M GC P+++T
Sbjct: 286 YNCLIDGCCKTNRIGRALELFEDMKTKGCVPNQVT 320
>AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403744-17407127
REVERSE LENGTH=822
Length = 822
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 193/485 (39%), Gaps = 72/485 (14%)
Query: 103 FTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALV 162
F +K + TY+ L+ + + G A L D M P L+++
Sbjct: 167 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 226
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+ E+ + N V + V ++ +LS + A+ F + + +T+TF
Sbjct: 227 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 286
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRS--FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
N+++ L G +A N MR C PD+VT+ +++H E++ R + + +
Sbjct: 287 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 346
Query: 281 ---GLKSKFS-------------------------------PNVRSYTTVISGYCKLSKM 306
GLK P+V SYT +++ Y + +
Sbjct: 347 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 406
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT---- 362
+A +F M + KPN T+N+LID + G + A+ I+++M G P+VV+
Sbjct: 407 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 466
Query: 363 -------------------------------FTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+ S I Y ++ + L+ M + +
Sbjct: 467 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 526
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
A TF++LIS C+ ++ EA L++++ I +Y+ V+ Y K G V EA +
Sbjct: 527 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 586
Query: 452 IVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
I +M+ C+PD +T ++ + + A +F +M A G PD I L
Sbjct: 587 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 646
Query: 511 KSGMP 515
K G P
Sbjct: 647 KGGQP 651
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 186/448 (41%), Gaps = 73/448 (16%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL-PDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ +L+R L ++G ++ M+ + + ++ A + +D ++ L E
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDIYNMMIRLHARHNWVDQARGLFFE 168
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
Q + +A YD L++ + + A+ L +++R+ ST+N L+ S+G+
Sbjct: 169 MQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSGN 228
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHG------------------------------- 263
EA + M G PD+VT+N +L
Sbjct: 229 WREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNI 288
Query: 264 ----LCRIKEVDRARDLLKEVGLK-SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
L ++ + +A DL + K ++ P+V ++T+++ Y +++ ++F+ M
Sbjct: 289 IIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAMVA 348
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G KPN ++N+L+ + G +AL + + +G PDVV++T L+ Y R +
Sbjct: 349 EGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGK 408
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP---------- 428
+++ M ++ T++ LI + L EA ++ RQ+++ I P
Sbjct: 409 AKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLA 468
Query: 429 -------------------------QPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKP 462
+ YN I Y + +++A A+ M +K K
Sbjct: 469 ACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKA 528
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKM 490
D TFTILI+G C + P+AI +M
Sbjct: 529 DSVTFTILISGSCRMSKYPEAISYLKEM 556
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 178/439 (40%), Gaps = 54/439 (12%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV--------SSFALVDRLDV 167
T+N++L + +S A ++ M+ PD+ ++ SS AL D +
Sbjct: 250 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL-DLFNS 308
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+E AE + + V ++++ L SV ++++ +F ++ ++N LMG
Sbjct: 309 MREKRAECRPDVVTFTSIMH--LYSV---KGEIENCRAVFEAMVAEGLKPNIVSYNALMG 363
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
G A L ++ G PD+V+Y LL+ R ++ +A+++ + K +
Sbjct: 364 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-RKERRK 422
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT-------------------- 327
PNV +Y +I Y + EA +F +M++ G KPN +
Sbjct: 423 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 482
Query: 328 ---------------FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
+NS I ++ ++ A+ +Y+ M D VTFT LI G CR
Sbjct: 483 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 542
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
+ K + EM +I + +S ++ K ++ EA + Q+K P
Sbjct: 543 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 602
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
Y ++ Y S +A + +EME +PD + L+ KG P + + ++
Sbjct: 603 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN-KGGQPSNVFVLMDLM 661
Query: 492 ATGCSP--DEITVRILSSC 508
P + I S+C
Sbjct: 662 REKEIPFTGAVFFEIFSAC 680
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 141/307 (45%), Gaps = 9/307 (2%)
Query: 221 TFNVLMGGLCSAGDVD---EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
F VL+ L G ++ FK++ +++ DI YN ++ R VD+AR L
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI--YNMMIRLHARHNWVDQARGLF 166
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
E+ K P+ +Y +I+ + + + + A +L D+M R+ P+ T+N+LI+
Sbjct: 167 FEMQ-KWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGS 225
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
GN AL + KKM +G PD+VT ++ Y + + L + M + T
Sbjct: 226 SGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTT 285
Query: 398 FSVLISYLCKSNRLQEARDLLRQL--KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
F+++I L K + +A DL + KR + P + ++ Y G ++ A+
Sbjct: 286 FNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEA 345
Query: 456 M-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
M E KP+ ++ L+ + + G + A+ + + G PD ++ L + +S
Sbjct: 346 MVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQ 405
Query: 515 PGEAARI 521
PG+A +
Sbjct: 406 PGKAKEV 412
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 173/403 (42%), Gaps = 10/403 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN L+ + G+ +A + ++ +G +PD L++S+ + +KE+
Sbjct: 357 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 416
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + + N V Y+ L+ + L +A+ +FR++ + + L+ +
Sbjct: 417 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 476
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
L+ +S G + + YN+ + E+++A L + + K K + ++T
Sbjct: 477 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSVTFTI 535
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+ISG C++SK EA S EM+ ++S++ + K G + A I+ +M G
Sbjct: 536 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 595
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
C PDV+ +TS++ Y K +L+ EM I S L+ K +
Sbjct: 596 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 655
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHC 475
L+ ++ +I +++ + C + + +++M + P + +I +
Sbjct: 656 VLMDLMREKEIPFTGAVFFEIFSA-CNTLQEWKRAIDLIQMMDPYLP---SLSIGLTNQM 711
Query: 476 M-----KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+ G+ + +FYK++A+G + T IL LL G
Sbjct: 712 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVG 754
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 158/422 (37%), Gaps = 86/422 (20%)
Query: 69 TRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKG 128
T +L+ +G+ P EV F + R K NV TYN L+ + G
Sbjct: 394 TCLLNSYGRSRQPGKAKEV----------FLMMRKERRKPNVV----TYNALIDAYGSNG 439
Query: 129 LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYD 188
+ A ++ M DG P+ + L+++ + + +L+ AQ + +N Y+
Sbjct: 440 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 499
Query: 189 NLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC------------------ 230
+ + + +L+ AI L++ + + ++ TF +L+ G C
Sbjct: 500 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 559
Query: 231 -----------------SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
G V EA N M+ GC PD++ Y ++LH ++ +A
Sbjct: 560 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 619
Query: 274 RDLLKEVGLKSKFSPNVRSYTTVISGYCK------------------------------- 302
+L E+ P+ + + ++ + K
Sbjct: 620 CELFLEMEANG-IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 678
Query: 303 ----LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP 358
L + K A L MD + N ++ F K G +++ + ++ K++ G
Sbjct: 679 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 738
Query: 359 DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLL 418
++ T+ L+E VG +++ M+ I S + +IS+ +S + E L+
Sbjct: 739 NLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGI-EFEPLI 797
Query: 419 RQ 420
RQ
Sbjct: 798 RQ 799
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 90/208 (43%), Gaps = 4/208 (1%)
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKMLFHG--CPPDVVTFTSLIEGYCRVGKVNYGLDLWH 384
F LI + G ++ + ++K M C + + + +I + R V+ L+
Sbjct: 109 NFPVLIRELSRRGCIELCVNVFKWMKIQKNYCARNDI-YNMMIRLHARHNWVDQARGLFF 167
Query: 385 EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
EM + T+ LI+ ++ + + A +L+ + R I P S YN++I+ SG
Sbjct: 168 EMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSSG 227
Query: 445 NVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
N EA + +M + PD T I+++ + + A+ F M PD T
Sbjct: 228 NWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFN 287
Query: 504 ILSSCLLKSGMPGEAARIKESLHENQGD 531
I+ CL K G +A + S+ E + +
Sbjct: 288 IIIYCLSKLGQSSQALDLFNSMREKRAE 315
>AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14807589-14810164 REVERSE
LENGTH=591
Length = 591
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/401 (22%), Positives = 188/401 (46%), Gaps = 13/401 (3%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N+L+ + QK + A+ LY + +P L+ ++ + ++ ++ +L E Q
Sbjct: 158 FNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIERAEVVLVEMQ 217
Query: 177 CNKVQ---VNAVVYDNLLSVLVKH-NKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ V + VY+ + L+K ++AI +F+ + R T T+N+++ A
Sbjct: 218 NHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETYNLMINLYGKA 277
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPN 289
++K MRS C P+I TY L++ R ++A ++ L+E GL+ P+
Sbjct: 278 SKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQEDGLE----PD 333
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
V Y ++ Y + A+ +F M G +P+ ++N ++D + + G A +++
Sbjct: 334 VYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFE 393
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+M G P + + L+ Y + V + EM+ + + +++ +
Sbjct: 394 EMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLG 453
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFT 468
+ + +L +++ S YN +I+ Y K+G ++ + VE++EK +PD T+T
Sbjct: 454 QFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKNFRPDVVTWT 513
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRI-LSSC 508
I + K + +F +M+ +GC+PD T ++ LS+C
Sbjct: 514 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSAC 554
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 109/255 (42%), Gaps = 40/255 (15%)
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT--------------- 327
KS F P+V + +I Y + + KEA SL+ ++ S P T
Sbjct: 148 KSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLIE 207
Query: 328 -----------------------FNSLIDGFVK-VGNMDSALGIYKKMLFHGCPPDVVTF 363
+N+ I+G +K GN + A+ ++++M C P T+
Sbjct: 208 RAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTTETY 267
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
+I Y + K L+ EM + ++ T++ L++ + ++A ++ QL+
Sbjct: 268 NLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQLQE 327
Query: 424 TDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPD 482
+ P +YN +++ Y ++G A I M+ C+PD+ ++ I++ + G D
Sbjct: 328 DGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSD 387
Query: 483 AIVIFYKMLATGCSP 497
A +F +M G +P
Sbjct: 388 AEAVFEEMKRLGIAP 402
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 92/218 (42%), Gaps = 1/218 (0%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ YN L+ S + G A ++ M+ G PD +V ++ ++ + E
Sbjct: 335 YVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHSDAEAVFEE 394
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + LLS K + + +E+ + +T N ++ G
Sbjct: 395 MKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTFVLNSMLNLYGRLGQ 454
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ K L M + C+ DI TYN L++ + ++R +L E+ K+ F P+V ++T
Sbjct: 455 FTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVELKEKN-FRPDVVTWT 513
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
+ I Y + + +F+EM SG P+ T L+
Sbjct: 514 SRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLL 551
>AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:22180231-22181652 REVERSE
LENGTH=473
Length = 473
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 11/331 (3%)
Query: 96 LGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFL 155
L ++FF ++ E+ H+ +Y++L++ + G + + L D M DG +R L
Sbjct: 131 LAYRFFLWSGEQECFRHTVNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLL 190
Query: 156 VSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVL--VKHNKLDDAICLFRELMRS 213
+ S + +++ + Y+ +L+ L VK KL + + +++++
Sbjct: 191 ICSCGEAGLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWV--YKQMLED 248
Query: 214 HSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
+ T+N+L+ G +D + + M G SPD TYN LLH L + + A
Sbjct: 249 GFSPDVLTYNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAA 308
Query: 274 RDLL---KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
L KEVG+ P+V YTT+I G + ++ DEM ++G +P+ +
Sbjct: 309 LTTLNHMKEVGI----DPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTV 364
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
+I G+V G +D A ++++M G P+V T+ S+I G C G+ L EM +R
Sbjct: 365 MITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRG 424
Query: 391 ISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
+ + +S L+SYL K+ +L EAR ++R++
Sbjct: 425 CNPNFVVYSTLVSYLRKAGKLSEARKVIREM 455
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 150/323 (46%), Gaps = 4/323 (1%)
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E +C + VN+ Y L+ + + + L E+++ TFN+L+ A
Sbjct: 140 GEQECFRHTVNS--YHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLICSCGEA 197
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G +A ++F P +YN +L+ L +K+ + K++ L+ FSP+V +
Sbjct: 198 GLAKQAVVQFMKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQM-LEDGFSPDVLT 256
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y ++ +L KM LFDEM R G P+++T+N L+ K +AL M
Sbjct: 257 YNILLWTNYRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMK 316
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G P V+ +T+LI+G R G + EM + ++V+I+ S L
Sbjct: 317 EVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELD 376
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+A+++ R++ +P YN +I G C +G EA ++ EME + C P+ ++ L+
Sbjct: 377 KAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLV 436
Query: 472 AGHCMKGRAPDAIVIFYKMLATG 494
+ G+ +A + +M+ G
Sbjct: 437 SYLRKAGKLSEARKVIREMVKKG 459
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 140/307 (45%), Gaps = 8/307 (2%)
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
+++++LM G+ ++ ++ M G T+N L+ C E A+ +
Sbjct: 149 VNSYHLLMKIFAECGEYKAMWRLVDEMVQDGFPTTARTFNLLI---CSCGEAGLAKQAVV 205
Query: 279 EVGLKSK---FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
+ +KSK + P SY +++ + + K ++ +M G P+ T+N L+
Sbjct: 206 QF-MKSKTFNYRPFKHSYNAILNSLLGVKQYKLIEWVYKQMLEDGFSPDVLTYNILLWTN 264
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
++G MD ++ +M G PD T+ L+ + K L + M I S+
Sbjct: 265 YRLGKMDRFDRLFDEMARDGFSPDSYTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSV 324
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
++ LI L ++ L+ + L ++ + P Y +I GY SG +D+A + E
Sbjct: 325 LHYTTLIDGLSRAGNLEACKYFLDEMVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFRE 384
Query: 456 MEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
M K + P+ FT+ +I G CM G +A + +M + GC+P+ + L S L K+G
Sbjct: 385 MTVKGQLPNVFTYNSMIRGLCMAGEFREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGK 444
Query: 515 PGEAARI 521
EA ++
Sbjct: 445 LSEARKV 451
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 81/172 (47%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TYN+LL L + +A + M+ G P L+ + L+ K L E
Sbjct: 290 YTYNILLHILGKGNKPLAALTTLNHMKEVGIDPSVLHYTTLIDGLSRAGNLEACKYFLDE 349
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + V Y +++ V +LD A +FRE+ T+N ++ GLC AG+
Sbjct: 350 MVKAGCRPDVVCYTVMITGYVVSGELDKAKEMFREMTVKGQLPNVFTYNSMIRGLCMAGE 409
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
EA L M S GC+P+ V Y+TL+ L + ++ AR +++E+ K +
Sbjct: 410 FREACWLLKEMESRGCNPNFVVYSTLVSYLRKAGKLSEARKVIREMVKKGHY 461
>AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr2:17403861-17406648
REVERSE LENGTH=683
Length = 683
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 108/485 (22%), Positives = 193/485 (39%), Gaps = 72/485 (14%)
Query: 103 FTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALV 162
F +K + TY+ L+ + + G A L D M P L+++
Sbjct: 35 FEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDMLRAAIAPSRSTYNNLINACGSS 94
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF 222
+ E+ + N V + V ++ +LS + A+ F + + +T+TF
Sbjct: 95 GNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTF 154
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRS--FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
N+++ L G +A N MR C PD+VT+ +++H E++ R + + +
Sbjct: 155 NIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTSIMHLYSVKGEIENCRAVFEAM 214
Query: 281 ---GLKSKFS-------------------------------PNVRSYTTVISGYCKLSKM 306
GLK P+V SYT +++ Y + +
Sbjct: 215 VAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQP 274
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT---- 362
+A +F M + KPN T+N+LID + G + A+ I+++M G P+VV+
Sbjct: 275 GKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTL 334
Query: 363 -------------------------------FTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+ S I Y ++ + L+ M + +
Sbjct: 335 LAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKV 394
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
A TF++LIS C+ ++ EA L++++ I +Y+ V+ Y K G V EA +
Sbjct: 395 KADSVTFTILISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAES 454
Query: 452 IVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
I +M+ C+PD +T ++ + + A +F +M A G PD I L
Sbjct: 455 IFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFN 514
Query: 511 KSGMP 515
K G P
Sbjct: 515 KGGQP 519
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 86/411 (20%), Positives = 180/411 (43%), Gaps = 37/411 (9%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YNM++R + A+ L+ M+ PD+ L+++ + + L+ +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + Y+NL++ +A+ + +++ + + T N+++ S
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK-SKFSPNVRSYTT 295
+A + M+ PD T+N +++ L ++ + +A DL + K ++ P+V ++T+
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFTS 193
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ Y +++ ++F+ M G KPN ++N+L+ + G +AL + + +G
Sbjct: 194 IMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQNG 253
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PDVV++T L+ Y R + +++ M ++ T++ LI + L EA
Sbjct: 254 IIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAEAV 313
Query: 416 DLLRQLKRTDIVP-----------------------------------QPSIYNHVIDGY 440
++ RQ+++ I P + YN I Y
Sbjct: 314 EIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYNSAIGSY 373
Query: 441 CKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
+ +++A A+ M ++K K D TFTILI+G C + P+AI +M
Sbjct: 374 INAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEM 424
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 154/327 (47%), Gaps = 5/327 (1%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
+Y+ ++ + +HN +D A LF E+ + + T++ L+ AG A ++ M
Sbjct: 13 IYNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
+P TYN L++ A ++ K++ + P++ ++ V+S Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKM-TDNGVGPDLVTHNIVLSAYKSGRQ 131
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH--GCPPDVVTF 363
+A S F+ M + +P+ TFN +I K+G AL ++ M C PDVVTF
Sbjct: 132 YSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTF 191
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
TS++ Y G++ ++ M + ++ +++ L+ A +L +K+
Sbjct: 192 TSIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQ 251
Query: 424 TDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPD 482
I+P Y +++ Y +S +A + + M +E+ KP+ T+ LI + G +
Sbjct: 252 NGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMMRKERRKPNVVTYNALIDAYGSNGFLAE 311
Query: 483 AIVIFYKMLATGCSPDEITV-RILSSC 508
A+ IF +M G P+ ++V +L++C
Sbjct: 312 AVEIFRQMEQDGIKPNVVSVCTLLAAC 338
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/439 (21%), Positives = 178/439 (40%), Gaps = 54/439 (12%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV--------SSFALVDRLDV 167
T+N++L + +S A ++ M+ PD+ ++ SS AL D +
Sbjct: 118 THNIVLSAYKSGRQYSKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQAL-DLFNS 176
Query: 168 SKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMG 227
+E AE + + V ++++ L SV ++++ +F ++ ++N LMG
Sbjct: 177 MREKRAECRPDVVTFTSIMH--LYSV---KGEIENCRAVFEAMVAEGLKPNIVSYNALMG 231
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
G A L ++ G PD+V+Y LL+ R ++ +A+++ + K +
Sbjct: 232 AYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM-RKERRK 290
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT-------------------- 327
PNV +Y +I Y + EA +F +M++ G KPN +
Sbjct: 291 PNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTV 350
Query: 328 ---------------FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
+NS I ++ ++ A+ +Y+ M D VTFT LI G CR
Sbjct: 351 LSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCR 410
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
+ K + EM +I + +S ++ K ++ EA + Q+K P
Sbjct: 411 MSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIA 470
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
Y ++ Y S +A + +EME +PD + L+ KG P + + ++
Sbjct: 471 YTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAF-NKGGQPSNVFVLMDLM 529
Query: 492 ATGCSP--DEITVRILSSC 508
P + I S+C
Sbjct: 530 REKEIPFTGAVFFEIFSAC 548
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 124/268 (46%), Gaps = 4/268 (1%)
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
YN ++ R VD+AR L E+ K P+ +Y +I+ + + + + A +L D+M
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQ-KWSCKPDAETYDALINAHGRAGQWRWAMNLMDDM 72
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
R+ P+ T+N+LI+ GN AL + KKM +G PD+VT ++ Y +
Sbjct: 73 LRAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQY 132
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL--KRTDIVPQPSIYN 434
+ L + M + TF+++I L K + +A DL + KR + P +
Sbjct: 133 SKALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAECRPDVVTFT 192
Query: 435 HVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
++ Y G ++ A+ M E KP+ ++ L+ + + G + A+ + +
Sbjct: 193 SIMHLYSVKGEIENCRAVFEAMVAEGLKPNIVSYNALMGAYAVHGMSGTALSVLGDIKQN 252
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARI 521
G PD ++ L + +S PG+A +
Sbjct: 253 GIIPDVVSYTCLLNSYGRSRQPGKAKEV 280
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 173/403 (42%), Gaps = 10/403 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN L+ + G+ +A + ++ +G +PD L++S+ + +KE+
Sbjct: 225 SYNALMGAYAVHGMSGTALSVLGDIKQNGIIPDVVSYTCLLNSYGRSRQPGKAKEVFLMM 284
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + + N V Y+ L+ + L +A+ +FR++ + + L+ +
Sbjct: 285 RKERRKPNVVTYNALIDAYGSNGFLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKK 344
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
L+ +S G + + YN+ + E+++A L + + K K + ++T
Sbjct: 345 VNVDTVLSAAQSRGINLNTAAYNSAIGSYINAAELEKAIALYQSM-RKKKVKADSVTFTI 403
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+ISG C++SK EA S EM+ ++S++ + K G + A I+ +M G
Sbjct: 404 LISGSCRMSKYPEAISYLKEMEDLSIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAG 463
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
C PDV+ +TS++ Y K +L+ EM I S L+ K +
Sbjct: 464 CEPDVIAYTSMLHAYNASEKWGKACELFLEMEANGIEPDSIACSALMRAFNKGGQPSNVF 523
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHC 475
L+ ++ +I +++ + C + + +++M + P + +I +
Sbjct: 524 VLMDLMREKEIPFTGAVFFEIFSA-CNTLQEWKRAIDLIQMMDPYLP---SLSIGLTNQM 579
Query: 476 M-----KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+ G+ + +FYK++A+G + T IL LL G
Sbjct: 580 LHLFGKSGKVEAMMKLFYKIIASGVGINLKTYAILLEHLLAVG 622
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 81/422 (19%), Positives = 158/422 (37%), Gaps = 86/422 (20%)
Query: 69 TRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKG 128
T +L+ +G+ P EV F + R K NV TYN L+ + G
Sbjct: 262 TCLLNSYGRSRQPGKAKEV----------FLMMRKERRKPNVV----TYNALIDAYGSNG 307
Query: 129 LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYD 188
+ A ++ M DG P+ + L+++ + + +L+ AQ + +N Y+
Sbjct: 308 FLAEAVEIFRQMEQDGIKPNVVSVCTLLAACSRSKKKVNVDTVLSAAQSRGINLNTAAYN 367
Query: 189 NLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC------------------ 230
+ + + +L+ AI L++ + + ++ TF +L+ G C
Sbjct: 368 SAIGSYINAAELEKAIALYQSMRKKKVKADSVTFTILISGSCRMSKYPEAISYLKEMEDL 427
Query: 231 -----------------SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
G V EA N M+ GC PD++ Y ++LH ++ +A
Sbjct: 428 SIPLTKEVYSSVLCAYSKQGQVTEAESIFNQMKMAGCEPDVIAYTSMLHAYNASEKWGKA 487
Query: 274 RDLLKEVGLKSKFSPNVRSYTTVISGYCK------------------------------- 302
+L E+ P+ + + ++ + K
Sbjct: 488 CELFLEMEANG-IEPDSIACSALMRAFNKGGQPSNVFVLMDLMREKEIPFTGAVFFEIFS 546
Query: 303 ----LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP 358
L + K A L MD + N ++ F K G +++ + ++ K++ G
Sbjct: 547 ACNTLQEWKRAIDLIQMMDPYLPSLSIGLTNQMLHLFGKSGKVEAMMKLFYKIIASGVGI 606
Query: 359 DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLL 418
++ T+ L+E VG +++ M+ I S + +IS+ +S + E L+
Sbjct: 607 NLKTYAILLEHLLAVGNWRKYIEVLEWMSGAGIQPSNQMYRDIISFGERSAGI-EFEPLI 665
Query: 419 RQ 420
RQ
Sbjct: 666 RQ 667
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 1/170 (0%)
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+ +I + R V+ L+ EM + T+ LI+ ++ + + A +L+ +
Sbjct: 14 YNMMIRLHARHNWVDQARGLFFEMQKWSCKPDAETYDALINAHGRAGQWRWAMNLMDDML 73
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAP 481
R I P S YN++I+ SGN EA + +M + PD T I+++ + +
Sbjct: 74 RAAIAPSRSTYNNLINACGSSGNWREALEVCKKMTDNGVGPDLVTHNIVLSAYKSGRQYS 133
Query: 482 DAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGD 531
A+ F M PD T I+ CL K G +A + S+ E + +
Sbjct: 134 KALSYFELMKGAKVRPDTTTFNIIIYCLSKLGQSSQALDLFNSMREKRAE 183
>AT5G14080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4543265-4545256 REVERSE
LENGTH=634
Length = 634
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 112/464 (24%), Positives = 201/464 (43%), Gaps = 41/464 (8%)
Query: 75 FGKHLTPSLVLEVVKR--LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSS 132
F ++PSLV V+ LN+ L FF + ++ H +Y+ + +SL S+
Sbjct: 41 FRHSISPSLVARVIDPFLLNHHSLALGFFNWAAQQPGYSHDSISYHSIFKSLSLSRQFSA 100
Query: 133 AKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLS 192
L+ ++ + L DS + L+ + L + + +L EA +++ V + LL+
Sbjct: 101 MDALFKQVKSNKILLDSSVYRSLIDTLVLGRKAQSAFWVLEEAFSTGQEIHPDVCNRLLA 160
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD-------VDE-------- 237
L D A LF ++ L T F V +G C + + VDE
Sbjct: 161 GLTSDGCYDYAQKLFVKMRHKGVSLNTLGFGVYIGWFCRSSETNQLLRLVDEVKKANLNI 220
Query: 238 ---------------------AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
AF L +R+ C PD + Y + + + +
Sbjct: 221 NGSIIALLILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVVTGNLYERQVV 280
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
LK+ K +P Y I ++ EA + E+ SG P + G V
Sbjct: 281 LKK-KRKLGVAPRSSDYRAFILDLISAKRLTEAKEV-AEVIVSGKFPMDNDILDALIGSV 338
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
+ DSA+ M+ G P + T + L + CR K ++ + + ++++ + L
Sbjct: 339 SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLSSKGYFSELQ 398
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
++S++IS+LCK+ R++E+ L+++K+ + P S+YN +I+ CK+ + A + EM
Sbjct: 399 SYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKAEMIRPAKKLWDEM 458
Query: 457 -EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
E CK + T+ +LI +G A +++ +F KML G PDE
Sbjct: 459 FVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDE 502
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 182/419 (43%), Gaps = 26/419 (6%)
Query: 102 QFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFAL 161
+ + LN++ S ++L SLC+ A + + +R PD + +F +
Sbjct: 212 EVKKANLNINGSIIAL-LILHSLCKCSREMDAFYILEELRNIDCKPDFMAYRVIAEAFVV 270
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
L + +L + + V + Y + L+ +L +A + ++ ++
Sbjct: 271 TGNLYERQVVLKKKRKLGVAPRSSDYRAFILDLISAKRLTEAKEVAEVIVSGKFPMDNDI 330
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD---RARDLLK 278
+ L+G + SA D D A +FL M S G P I T + L LCR + D +A +LL
Sbjct: 331 LDALIGSV-SAVDPDSAVEFLVYMVSTGKLPAIRTLSKLSKNLCRHDKSDHLIKAYELLS 389
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
G + ++SY+ +IS CK +++E+ + EM + G P+ +N+LI+ K
Sbjct: 390 SKG----YFSELQSYSLMISFLCKAGRVRESYTALQEMKKEGLAPDVSLYNALIEACCKA 445
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
+ A ++ +M GC ++ T+ LI G+ L L+ +M R I +
Sbjct: 446 EMIRPAKKLWDEMFVEGCKMNLTTYNVLIRKLSEEGEAEESLRLFDKMLERGIEPDETIY 505
Query: 399 SVLISYLCKSNRLQEARDLLRQ-LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
LI LCK +++ A ++ R+ ++R + + + C +G+ EA+ ++ E E
Sbjct: 506 MSLIEGLCKETKIEAAMEVFRKCMERDHKTVTRRVLSEFVLNLCSNGHSGEASQLLRERE 565
Query: 458 E-----------KCKPDKFTFTILIAG-HCMKGRAPDAI-VIFYKMLATGCS---PDEI 500
KC D I I +K +P + I +LA+ CS PD I
Sbjct: 566 HLEHTGAHVVLLKCVADAKEVEIGIRHMQWIKEVSPSLVHTISSDLLASFCSSSDPDSI 624
>AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28086800-28089367 FORWARD
LENGTH=855
Length = 855
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 153/321 (47%), Gaps = 9/321 (2%)
Query: 193 VLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS 251
VL + + +A+ F L R + T+ ++G L A E K L+ M GC
Sbjct: 332 VLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCK 391
Query: 252 PDIVTYNTLLHGLCR---IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
P+ VTYN L+H R +KE + ++E G + P+ +Y T+I + K +
Sbjct: 392 PNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCE----PDRVTYCTLIDIHAKAGFLDI 447
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A ++ M +G P+ FT++ +I+ K G++ +A ++ +M+ GC P++VTF +I
Sbjct: 448 AMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIA 507
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
+ + L L+ +M T+S+++ L L+EA + +++R + VP
Sbjct: 508 LHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVP 567
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
+Y ++D + K+GNVD+A M + +P+ T L++ R +A +
Sbjct: 568 DEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLL 627
Query: 488 YKMLATGCSPDEITVRILSSC 508
MLA G P T +L SC
Sbjct: 628 QSMLALGLHPSLQTYTLLLSC 648
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 160/335 (47%), Gaps = 5/335 (1%)
Query: 71 VLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLH 130
L FG + +V+K+++N FF + + + H TY ++ +L +
Sbjct: 316 ALHNFGFRMDAYQANQVLKQMDNYANALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQF 375
Query: 131 SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNL 190
L D M DG P++ L+ S+ + L + + + Q + + V Y L
Sbjct: 376 GEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTL 435
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
+ + K LD A+ +++ + + +T T++V++ L AG + A + M GC
Sbjct: 436 IDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGC 495
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS--GYCKLSKMKE 308
+P++VT+N ++ + + + A L +++ + F P+ +Y+ V+ G+C ++E
Sbjct: 496 TPNLVTFNIMIALHAKARNYETALKLYRDM-QNAGFQPDKVTYSIVMEVLGHCGF--LEE 552
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A +F EM R P+ + L+D + K GN+D A Y+ ML G P+V T SL+
Sbjct: 553 AEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNVPTCNSLLS 612
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
+ RV +++ +L M + SL T+++L+S
Sbjct: 613 TFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS 647
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 117/234 (50%), Gaps = 5/234 (2%)
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+ F + +YTT++ + + E + L DEM R G KPN T+N LI + + +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A+ ++ +M GC PD VT+ +LI+ + + G ++ +D++ M +S T+SV+I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-K 461
+ L K+ L A L ++ P +N +I + K+ N + A + +M+ +
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 462 PDKFTFTIL--IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
PDK T++I+ + GHC G +A +F +M PDE +L K+G
Sbjct: 532 PDKVTYSIVMEVLGHC--GFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAG 583
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 93/205 (45%), Gaps = 1/205 (0%)
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+ G K + T+ +++ + + +M+ GC P+ VT+ LI Y R +
Sbjct: 352 QPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIHSYGRANYLK 411
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
++++++M T+ LI K+ L A D+ ++++ + P Y+ +I
Sbjct: 412 EAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSPDTFTYSVII 471
Query: 438 DGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
+ K+G++ A+ + EM + C P+ TF I+IA H A+ ++ M G
Sbjct: 472 NCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQ 531
Query: 497 PDEITVRILSSCLLKSGMPGEAARI 521
PD++T I+ L G EA +
Sbjct: 532 PDKVTYSIVMEVLGHCGFLEEAEGV 556
>AT1G79080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29747102-29748832 REVERSE
LENGTH=576
Length = 576
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 177/438 (40%), Gaps = 44/438 (10%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K NV HS LL LC+ A + + M G +PD+ +LV+ +
Sbjct: 103 KPNVAHS----TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ +L+ + + + N V Y+ L+ L L+ ++ LM+ T++ L+
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
DEA K L+ + G P++V+YN LL G C+ D A L +E+ K F
Sbjct: 219 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKG-F 277
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
NV SY ++ C + +EA+SL EMD P+ T+N LI+ G + AL
Sbjct: 278 KANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQ 337
Query: 347 IYKKML--FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL--- 401
+ K+M H ++ +I C+ GKV+ + EM R + T++ +
Sbjct: 338 VLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSL 397
Query: 402 --------------------------------ISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
I+ LC+ A LL ++ R P
Sbjct: 398 CEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPD 457
Query: 430 PSIYNHVIDGYCKSGNVDEANAI--VVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
Y+ +I G C G A + ++E E CKP F +I G C R A+ +F
Sbjct: 458 AHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVF 517
Query: 488 YKMLATGCSPDEITVRIL 505
M+ P+E T IL
Sbjct: 518 EMMVEKKRMPNETTYAIL 535
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 167/379 (44%), Gaps = 39/379 (10%)
Query: 189 NLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
LL L K N+L AI + ++ S + S + L+ LC G+V A + + M
Sbjct: 111 QLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKMEDH 170
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G + VTYN L+ GLC + ++++ ++ + ++ +PN +Y+ ++ K E
Sbjct: 171 GYPSNTVTYNALVRGLCMLGSLNQSLQFVERL-MQKGLAPNAFTYSFLLEAAYKERGTDE 229
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A L DE+ G +PN ++N L+ GF K G D A+ +++++ G +VV++ L+
Sbjct: 230 AVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLR 289
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD--I 426
C G+ L EM+ + + S+ T+++LI+ L R ++A +L+++ + +
Sbjct: 290 CLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQF 349
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTIL--------------- 470
+ YN VI CK G VD + EM +CKP++ T+ +
Sbjct: 350 RVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLCEHNSKVQEAFY 409
Query: 471 --------------------IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
I C KG A + Y+M G PD T L L
Sbjct: 410 IIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLC 469
Query: 511 KSGMPGEAARIKESLHENQ 529
GM A + + E++
Sbjct: 470 LEGMFTGAMEVLSIMEESE 488
Score = 122 bits (306), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 119/446 (26%), Positives = 190/446 (42%), Gaps = 23/446 (5%)
Query: 34 TQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNN 93
TQL Y C + K +VS+ + S T +++ K +++V+++
Sbjct: 110 TQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQLVEKM-- 167
Query: 94 PILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLL 152
E + TYN L+R LC G L+ S + + M+ G P++
Sbjct: 168 ------------EDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQ-KGLAPNAFTY 214
Query: 153 GFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR 212
FL+ + D + +LL E + N V Y+ LL+ K + DDA+ LFREL
Sbjct: 215 SFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPA 274
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDR 272
++N+L+ LC G +EA L M +P +VTYN L++ L ++
Sbjct: 275 KGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQ 334
Query: 273 ARDLLKEVGLKS-KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
A +LKE+ + +F SY VI+ CK K+ DEM KPN T+N++
Sbjct: 335 ALQVLKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAI 394
Query: 332 IDGFVKVGNMDSALGIYKKMLFHG--CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
+ A I + + C D + S+I CR G L +EM
Sbjct: 395 GSLCEHNSKVQEAFYIIQSLSNKQKCCTHDF--YKSVITSLCRKGNTFAAFQLLYEMTRC 452
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD-IVPQPSIYNHVIDGYCKSGNVDE 448
HT+S LI LC A ++L ++ ++ P +N +I G CK D
Sbjct: 453 GFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDL 512
Query: 449 ANAIVVEMEEKCK-PDKFTFTILIAG 473
A + M EK + P++ T+ IL+ G
Sbjct: 513 AMEVFEMMVEKKRMPNETTYAILVEG 538
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 116/235 (49%), Gaps = 1/235 (0%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
PNV T ++ CK +++K+A + + M SG P+A + L++ K GN+ A+ +
Sbjct: 104 PNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYAMQL 163
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+KM HG P + VT+ +L+ G C +G +N L + + ++ + T+S L+ K
Sbjct: 164 VEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEAAYK 223
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFT 466
EA LL ++ P YN ++ G+CK G D+A A+ E+ K K + +
Sbjct: 224 ERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVS 283
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ IL+ C GR +A + +M +P +T IL + L G +A ++
Sbjct: 284 YNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 149/321 (46%), Gaps = 6/321 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+YN+LL C++G A L+ + G + L+ R + + LLAE
Sbjct: 248 SYNVLLTGFCKEGRTDDAMALFRELPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEM 307
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE--TSTFNVLMGGLCSAG 233
+ V Y+ L++ L H + + A+ + +E+ + + +++N ++ LC G
Sbjct: 308 DGGDRAPSVVTYNILINSLAFHGRTEQALQVLKEMSKGNHQFRVTATSYNPVIARLCKEG 367
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK-EVDRARDLLKEVGLKSKFSPNVRS 292
VD K L+ M C P+ TYN + LC +V A +++ + K K +
Sbjct: 368 KVDLVVKCLDEMIYRRCKPNEGTYNAI-GSLCEHNSKVQEAFYIIQSLSNKQKCCTH-DF 425
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +VI+ C+ A L EM R G P+A T+++LI G G A+ + M
Sbjct: 426 YKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIME 485
Query: 353 -FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
C P V F ++I G C++ + + ++++ M + + T+++L+ + + L
Sbjct: 486 ESENCKPTVDNFNAMILGLCKIRRTDLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDEL 545
Query: 412 QEARDLLRQLKRTDIVPQPSI 432
+ A+++L +L+ ++ Q ++
Sbjct: 546 ELAKEVLDELRLRKVIGQNAV 566
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 94/200 (47%), Gaps = 1/200 (0%)
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
G KPN L+ K + A+ + + M+ G PD +T L+ C+ G V Y
Sbjct: 101 GHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVGYA 160
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+ L +M ++ T++ L+ LC L ++ + +L + + P Y+ +++
Sbjct: 161 MQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLLEA 220
Query: 440 YCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
K DEA ++ E+ K +P+ ++ +L+ G C +GR DA+ +F ++ A G +
Sbjct: 221 AYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFKAN 280
Query: 499 EITVRILSSCLLKSGMPGEA 518
++ IL CL G EA
Sbjct: 281 VVSYNILLRCLCCDGRWEEA 300
>AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:8947426-8949424 FORWARD
LENGTH=599
Length = 599
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 146/306 (47%), Gaps = 19/306 (6%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR-DLLKE 279
TFNVL+ C V+EA++ + M G PD VTYNT+ + E RA +++++
Sbjct: 190 TFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEK 249
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ +K K PN R+ V+ GYC+ ++++ M + N FNSLI+GFV+V
Sbjct: 250 MVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVM 309
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR----VGKVNYGLDLWHEMNTRNISASL 395
+ D GI D VT T L+ + VG + + M N+ A +
Sbjct: 310 DRD---GI-----------DEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADV 355
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
T+S +++ + +++A + +++ + + P Y+ + GY ++ +A ++
Sbjct: 356 ITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLET 415
Query: 456 MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
+ + +P+ FT +I+G C G DA+ +F KM G SP+ T L L+ P
Sbjct: 416 LIVESRPNVVIFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQP 475
Query: 516 GEAARI 521
+A +
Sbjct: 476 WKAEEV 481
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 114/209 (54%), Gaps = 6/209 (2%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P++ SYTT+++ + SS+ E+++SGTK ++ FN++I+ F + GNM+ A+
Sbjct: 78 PSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFSESGNMEDAVQA 137
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG---LDLWHEMNTRNISASLHTFSVLISY 404
KM G P T+ +LI+GY GK LDL E ++ ++ TF+VL+
Sbjct: 138 LLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQA 197
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE---MEEKCK 461
CK +++EA +++++++ + P YN + Y + G A + VVE M+EK K
Sbjct: 198 WCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAK 257
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
P+ T I++ G+C +GR D + +M
Sbjct: 258 PNGRTCGIVVGGYCREGRVRDGLRFVRRM 286
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 187/389 (48%), Gaps = 40/389 (10%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL---PDSRLLGFLVSSFALV 162
++L ++ + TYN L++ G + L D M +G + P+ R LV ++
Sbjct: 142 KELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGPNIRTFNVLVQAWCKK 201
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKL--DDAICLFRELMRSHSHLETS 220
+++ + E++ + + V+ + V Y+ + + V+ + ++ + + +M+ +
Sbjct: 202 KKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMVMKEKAKPNGR 261
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVD--------- 271
T +++GG C G V + +F+ M+ ++V +N+L++G + + D
Sbjct: 262 TCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDRDGIDEVTLTL 321
Query: 272 -------------------RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
+ L+KE +K+ +V +Y+TV++ + M++A+ +
Sbjct: 322 LLMSFNEEVELVGNQKMKVQVLTLMKECNVKA----DVITYSTVMNAWSSAGYMEKAAQV 377
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
F EM ++G KP+A ++ L G+V+ A + + ++ P+VV FT++I G+C
Sbjct: 378 FKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCS 436
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
G ++ + ++++M +S ++ TF L+ + + +A ++L+ ++ + P+ S
Sbjct: 437 NGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENST 496
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEKCK 461
+ + + + +G DE+N + + KCK
Sbjct: 497 FLLLAEAWRVAGLTDESNKAINAL--KCK 523
>AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19608857-19610428 REVERSE
LENGTH=523
Length = 523
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 143/321 (44%), Gaps = 39/321 (12%)
Query: 212 RSHSHLETST--FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE 269
R +++ E S+ F ++ A EA + N M FG P + + LLH LC K
Sbjct: 129 REYNYFEISSKVFWIVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKH 188
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN 329
V+ A++ F + G P+A T++
Sbjct: 189 VNHAQEF------------------------------------FGKAKGFGIVPSAKTYS 212
Query: 330 SLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
L+ G+ ++ + A ++ +ML C D++ + +L++ C+ G V+ G ++ EM
Sbjct: 213 ILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNL 272
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
+ ++F++ I C + + A +L ++KR D+VP +NH+I CK+ VD+A
Sbjct: 273 GLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDA 332
Query: 450 NAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSC 508
++ EM +K PD +T+ ++A HC A + +M T C PD T ++
Sbjct: 333 YLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKL 392
Query: 509 LLKSGMPGEAARIKESLHENQ 529
L++ G A I E + E +
Sbjct: 393 LIRIGRFDRATEIWEGMSERK 413
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 129/255 (50%), Gaps = 1/255 (0%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
+ LL SLC K + A+ + + G +P ++ LV +A + ++++ E
Sbjct: 177 DQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE 236
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
V+ + Y+ LL L K +D +F+E+ + +F + + C AGDV
Sbjct: 237 RNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHS 296
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A+K L+ M+ + P++ T+N ++ LC+ ++VD A LL E+ ++ +P+ +Y +++
Sbjct: 297 AYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEM-IQKGANPDTWTYNSIM 355
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
+ +C ++ A+ L MDR+ P+ T+N ++ +++G D A I++ M
Sbjct: 356 AYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFY 415
Query: 358 PDVVTFTSLIEGYCR 372
P V T+T +I G R
Sbjct: 416 PTVATYTVMIHGLVR 430
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 100/445 (22%), Positives = 187/445 (42%), Gaps = 45/445 (10%)
Query: 55 KIVSTLFLHSNSLD--TRVLSYFGKHLTPSLVLEVVKRLNNPILGF---KFFQFTREKLN 109
+I L H N D L + ++ +LV +V+KR N LGF +FF + R +
Sbjct: 40 EISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKN--LGFPAHRFFLWARRIPD 97
Query: 110 VHHSFWTYNMLL------------------------------------RSLCQKGLHSSA 133
HS +Y++L+ R+ + L S A
Sbjct: 98 FAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEA 157
Query: 134 KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
++ M G P L L+ S ++ ++E +A+ + +A Y L+
Sbjct: 158 CRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRG 217
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
+ A +F E++ + ++ +N L+ LC +GDVD +K M + G PD
Sbjct: 218 WARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPD 277
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
++ +H C +V A +L + + PNV ++ +I CK K+ +A L
Sbjct: 278 AYSFAIFIHAYCDAGDVHSAYKVLDRMK-RYDLVPNVYTFNHIIKTLCKNEKVDDAYLLL 336
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
DEM + G P+ +T+NS++ ++ A + +M C PD T+ +++ R+
Sbjct: 337 DEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRI 396
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLC-KSNRLQEARDLLRQLKRTDIVPQPSI 432
G+ + ++W M+ R ++ T++V+I L K +L+EA + I P +
Sbjct: 397 GRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTT 456
Query: 433 YNHVIDGYCKSGNVDEANAIVVEME 457
+ + G +D + + +ME
Sbjct: 457 VEMLRNRLVGWGQMDVVDVLAGKME 481
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 139/311 (44%), Gaps = 16/311 (5%)
Query: 33 LTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLN 92
L QL ++ CDK + + +F K + S T S+++ R+
Sbjct: 176 LDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAK-------------TYSILVRGWARIR 222
Query: 93 NPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLL 152
+ K F E+ N YN LL +LC+ G ++ M G PD+
Sbjct: 223 DASGARKVFDEMLER-NCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSF 281
Query: 153 GFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR 212
+ ++ + + ++L + + N +++++ L K+ K+DDA L E+++
Sbjct: 282 AIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQ 341
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDR 272
++ +T T+N +M C +V+ A K L+ M C PD TYN +L L RI DR
Sbjct: 342 KGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIGRFDR 401
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYC-KLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
A ++ + + + KF P V +YT +I G K K++EA F+ M G P + T L
Sbjct: 402 ATEIWEGMS-ERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTVEML 460
Query: 332 IDGFVKVGNMD 342
+ V G MD
Sbjct: 461 RNRLVGWGQMD 471
>AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7674420-7675575 FORWARD
LENGTH=349
Length = 349
Score = 122 bits (306), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 109/198 (55%), Gaps = 2/198 (1%)
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
N ++ + V D + L + ++D+A L +EL HS +T T+N L+ LC D+
Sbjct: 153 NGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHV 212
Query: 238 AFKFLNGMRS-FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
++F++ MR F PD+V++ L+ +C K + A L+ ++G + F P+ Y T+
Sbjct: 213 VYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLG-NAGFKPDCFLYNTI 271
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
+ G+C LSK EA ++ +M G +P+ T+N+LI G K G ++ A K M+ G
Sbjct: 272 MKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGY 331
Query: 357 PPDVVTFTSLIEGYCRVG 374
PD T+TSL+ G CR G
Sbjct: 332 EPDTATYTSLMNGMCRKG 349
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 200 LDDAICLFRELMRSHSHLET--STFNVLMGGLCSAGD--VDEAFKFLNGMRSFGCSPDIV 255
++D + LF+ +++S + STF +L+ C A D + + LN M + G PD V
Sbjct: 101 VNDTVKLFQHILKSQPNFRPGRSTFLILLSHACRAPDSSISNVHRVLNLMVNNGLEPDQV 160
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
T + + LC VD A+DL+KE+ K P+ +Y ++ CK + DE
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHS-PPDTYTYNFLLKHLCKCKDLHVVYEFVDE 219
Query: 316 M-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
M D KP+ +F LID N+ A+ + K+ G PD + ++++G+C +
Sbjct: 220 MRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLS 279
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
K + + ++ +M + T++ LI L K+ R++EAR L+ + P + Y
Sbjct: 280 KGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTMVDAGYEPDTATYT 339
Query: 435 HVIDGYCKSG 444
+++G C+ G
Sbjct: 340 SLMNGMCRKG 349
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 124/267 (46%), Gaps = 7/267 (2%)
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK--FSPNVRSYTTVISGYCKL--SKMKE 308
D+ +N++L I V+ L + + LKS+ F P ++ ++S C+ S +
Sbjct: 84 DLKFHNSVLQSYGSIAVVNDTVKLFQHI-LKSQPNFRPGRSTFLILLSHACRAPDSSISN 142
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
+ + M +G +P+ T + + + G +D A + K++ PPD T+ L++
Sbjct: 143 VHRVLNLMVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLK 202
Query: 369 GYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
C+ ++ + EM ++ L +F++LI +C S L+EA L+ +L
Sbjct: 203 HLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFK 262
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
P +YN ++ G+C EA + +M EE +PD+ T+ LI G GR +A +
Sbjct: 263 PDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMY 322
Query: 487 FYKMLATGCSPDEITVRILSSCLLKSG 513
M+ G PD T L + + + G
Sbjct: 323 LKTMVDAGYEPDTATYTSLMNGMCRKG 349
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 118/255 (46%), Gaps = 12/255 (4%)
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT--KPNAFTFNS 330
A+ L + S+ +++ + +V+ Y ++ + + LF + +S +P TF
Sbjct: 68 AKSLFNSIAATSRIPLDLKFHNSVLQSYGSIAVVNDTVKLFQHILKSQPNFRPGRSTFLI 127
Query: 331 LIDGFVK-----VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHE 385
L+ + + N+ L + M+ +G PD VT + C G+V+ DL E
Sbjct: 128 LLSHACRAPDSSISNVHRVLNL---MVNNGLEPDQVTTDIAVRSLCETGRVDEAKDLMKE 184
Query: 386 MNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT-DIVPQPSIYNHVIDGYCKSG 444
+ ++ +T++ L+ +LCK L + + +++ D+ P + +ID C S
Sbjct: 185 LTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEMRDDFDVKPDLVSFTILIDNVCNSK 244
Query: 445 NVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
N+ EA +V ++ KPD F + ++ G C + +A+ ++ KM G PD+IT
Sbjct: 245 NLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYN 304
Query: 504 ILSSCLLKSGMPGEA 518
L L K+G EA
Sbjct: 305 TLIFGLSKAGRVEEA 319
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T ++ +RSLC+ G AK L + PD+ FL+ L V E + E
Sbjct: 161 TTDIAVRSLCETGRVDEAKDLMKELTEKHSPPDTYTYNFLLKHLCKCKDLHVVYEFVDEM 220
Query: 176 QCN-KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + V+ + V + L+ + L +A+ L +L + + +N +M G C+
Sbjct: 221 RDDFDVKPDLVSFTILIDNVCNSKNLREAMYLVSKLGNAGFKPDCFLYNTIMKGFCTLSK 280
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
EA M+ G PD +TYNTL+ GL + V+ AR LK + + + + P+ +YT
Sbjct: 281 GSEAVGVYKKMKEEGVEPDQITYNTLIFGLSKAGRVEEARMYLKTM-VDAGYEPDTATYT 339
Query: 295 TVISGYCK 302
++++G C+
Sbjct: 340 SLMNGMCR 347
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 115 WTYNMLLRSLCQ-KGLHSSAKLLYDCMR--FDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
+TYN LL+ LC+ K LH + + D MR FD K PD L+ + L + L
Sbjct: 195 YTYNFLLKHLCKCKDLHVVYEFV-DEMRDDFDVK-PDLVSFTILIDNVCNSKNLREAMYL 252
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+++ + + +Y+ ++ +K +A+ +++++ + T+N L+ GL
Sbjct: 253 VSKLGNAGFKPDCFLYNTIMKGFCTLSKGSEAVGVYKKMKEEGVEPDQITYNTLIFGLSK 312
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR 266
AG V+EA +L M G PD TY +L++G+CR
Sbjct: 313 AGRVEEARMYLKTMVDAGYEPDTATYTSLMNGMCR 347
>AT5G43820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17618948-17620588 FORWARD
LENGTH=546
Length = 546
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/454 (22%), Positives = 198/454 (43%), Gaps = 41/454 (9%)
Query: 62 LHSNSLDTRVLSYFGKHLTPSLVLEVVKRLN-NPILGFKFFQFTREKLNVHHSFWTYNML 120
L S + LS G L+ +V +V+ R N + FF + + V +Y+++
Sbjct: 98 LKGKSAIQKSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVI 157
Query: 121 LRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKV 180
LR+L ++ L S + M +G PD L + SF V + + EL E++ V
Sbjct: 158 LRALGRRKLFSFMMDVLKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGV 217
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
+ + ++ LL L + RSH S FN G +
Sbjct: 218 KCSTESFNALLRCLCE---------------RSHVSAAKSVFNAKKGNI----------- 251
Query: 241 FLNGMRSFGCSP-DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
P D +YN ++ G ++ EV+ +LKE+ ++S F P+ SY+ +I G
Sbjct: 252 -----------PFDSCSYNIMISGWSKLGEVEEMEKVLKEM-VESGFGPDCLSYSHLIEG 299
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+ ++ ++ +FD + G P+A +N++I F+ + D ++ Y++ML C P+
Sbjct: 300 LGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEPN 359
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
+ T++ L+ G + KV+ L+++ EM +R + + + + LC A + +
Sbjct: 360 LETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQ 419
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKP-DKFTFTILIAGHCMKG 478
+ ++ S Y ++ + G + EM+E P D + ++ G C+ G
Sbjct: 420 KSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIG 479
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
+A+++ + + G P+ LSS L+ S
Sbjct: 480 HLENAVLVMEEAMRKGFCPNRFVYSRLSSKLMAS 513
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 152/320 (47%), Gaps = 4/320 (1%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLP-DSRLLGFLVSSFALVDR 164
E V S ++N LLR LC++ S+AK +++ + G +P DS ++S ++ +
Sbjct: 213 ESFGVKCSTESFNALLRCLCERSHVSAAKSVFNAKK--GNIPFDSCSYNIMISGWSKLGE 270
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
++ +++L E + + + Y +L+ L + +++D++ +F + + + + +N
Sbjct: 271 VEEMEKVLKEMVESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNA 330
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
++ SA D DE+ ++ M C P++ TY+ L+ GL + ++V A ++ +E+ L
Sbjct: 331 MICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEM-LSR 389
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
P T+ + C A ++ + ++G + + + L+ + G
Sbjct: 390 GVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGML 449
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
L ++ +M G P DV + +++G C +G + + + E + + +S L S
Sbjct: 450 LNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSK 509
Query: 405 LCKSNRLQEARDLLRQLKRT 424
L SN+ + A L ++K+
Sbjct: 510 LMASNKTELAYKLFLKIKKA 529
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 131/292 (44%), Gaps = 11/292 (3%)
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE---VGLKSKFSPNVRSYTTVIS 298
L GM G +PD+ + R+ V RA +L +E G+K + S+ ++
Sbjct: 174 LKGMVCEGVNPDLECLTIAMDSFVRVHYVRRAIELFEESESFGVKC----STESFNALLR 229
Query: 299 GYCKLSKMKEASSLFDEMDRSGTKP-NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
C+ S + A S+F+ + G P ++ ++N +I G+ K+G ++ + K+M+ G
Sbjct: 230 CLCERSHVSAAKSVFNA--KKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMVESGFG 287
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
PD ++++ LIEG R G++N ++++ + + + ++ +I + E+
Sbjct: 288 PDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFDESMRY 347
Query: 418 LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCM 476
R++ + P Y+ ++ G K V +A I EM + P T + C
Sbjct: 348 YRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFLKPLCS 407
Query: 477 KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
G A+VI+ K GC E ++L L + G G + + + E+
Sbjct: 408 YGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQES 459
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 209/452 (46%), Gaps = 23/452 (5%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
+L V + KFF+ RE+ + +N +L + CQ G H A L M +
Sbjct: 222 ILAVYAKCGELDFATKFFRRMRERDVI-----AWNSVLLAYCQNGKHEEAVELVKEMEKE 276
Query: 144 GKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA 203
G P L+ + + + D + +L+ + + + + + ++S L+ + A
Sbjct: 277 GISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRYQA 336
Query: 204 ICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHG 263
+ +FR++ + T + +++ + + G D++ N+L+
Sbjct: 337 LDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDM 396
Query: 264 LCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
+ +++ AR + V K +V ++ ++I+GYC+ +A LF M + +P
Sbjct: 397 YSKCGKLEDARKVFDSVKNK-----DVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRP 451
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG-CPPDVVTFTSLIEGYCRVGKVNYGLDL 382
N T+N++I G++K G+ A+ ++++M G + T+ +I GY + GK + L+L
Sbjct: 452 NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALEL 511
Query: 383 WHEMN-TRNISASLHTFSVLISYLCKSNRL--QEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+ +M +R + S+ S+L + C +N L + R++ + R ++ ++ N + D
Sbjct: 512 FRKMQFSRFMPNSVTILSLLPA--C-ANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDT 568
Query: 440 YCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
Y KSG+++ + I + ME K D T+ LI G+ + G A+ +F +M G +P+
Sbjct: 569 YAKSGDIEYSRTIFLGMETK---DIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNR 625
Query: 500 ITVRILSSCLLKSGMPGEAARIKESLHENQGD 531
T LSS +L G+ G K+ + D
Sbjct: 626 GT---LSSIILAHGLMGNVDEGKKVFYSIAND 654
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 105/422 (24%), Positives = 204/422 (48%), Gaps = 35/422 (8%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K F RE+ + +T++ ++ + ++ L+ M DG LPD L ++
Sbjct: 136 KVFDSMRER-----NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQG 190
Query: 159 FALVDRLDVSKEL------LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR 212
A ++ K + L + C +V +++L+V K +LD A FR MR
Sbjct: 191 CANCGDVEAGKVIHSVVIKLGMSSCLRVS------NSILAVYAKCGELDFATKFFRR-MR 243
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDR 272
+ +N ++ C G +EA + + M G SP +VT+N L+ G ++ + D
Sbjct: 244 ER---DVIAWNSVLLAYCQNGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDA 300
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
A DL++++ + +V ++T +ISG +A +F +M +G PNA T S +
Sbjct: 301 AMDLMQKMETFG-ITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAV 359
Query: 333 DGF--VKVGNMDSAL-GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR 389
+KV N S + I KM G DV+ SL++ Y + GK+ ++ + +
Sbjct: 360 SACSCLKVINQGSEVHSIAVKM---GFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK 416
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
++ +T++ +I+ C++ +A +L +++ ++ P +N +I GY K+G+ EA
Sbjct: 417 DV----YTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEA 472
Query: 450 NAIVVEMEE--KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV-RILS 506
+ ME+ K + + T+ ++IAG+ G+ +A+ +F KM + P+ +T+ +L
Sbjct: 473 MDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLP 532
Query: 507 SC 508
+C
Sbjct: 533 AC 534
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/346 (22%), Positives = 157/346 (45%), Gaps = 8/346 (2%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N + ++ + N+ + LFR +M+ + F ++ G + GDV+
Sbjct: 145 NLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVIH 204
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
+ + G S + N++L + E+D A + + + +V ++ +V+ YC+
Sbjct: 205 SVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRER-----DVIAWNSVLLAYCQ 259
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
K +EA L EM++ G P T+N LI G+ ++G D+A+ + +KM G DV T
Sbjct: 260 NGKHEEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFT 319
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+T++I G G LD++ +M + + T +S + + ++
Sbjct: 320 WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAV 379
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPD 482
+ + + N ++D Y K G +++A + ++ K D +T+ +I G+C G
Sbjct: 380 KMGFIDDVLVGNSLVDMYSKCGKLEDARKVFDSVKNK---DVYTWNSMITGYCQAGYCGK 436
Query: 483 AIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
A +F +M P+ IT + S +K+G GEA + + + ++
Sbjct: 437 AYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKD 482
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 168/388 (43%), Gaps = 46/388 (11%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E + +T+ ++ L G+ A ++ M G +P++ + VS+ + + +
Sbjct: 309 ETFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVI 368
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ E+ + A + +V ++L+ + K KL+DA R++ S + + T+N +
Sbjct: 369 NQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDA----RKVFDSVKNKDVYTWNSM 424
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
+ G C AG +A++ M+ P+I+T+NT++ G + + A DL + + K
Sbjct: 425 ITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMISGYIKNGDEGEAMDLFQRMEKDGK 484
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF----------------- 328
N ++ +I+GY + K EA LF +M S PN+ T
Sbjct: 485 VQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVTILSLLPACANLLGAKMVR 544
Query: 329 ------------------NSLIDGFVKVGNMDSALGIYKKMLFHGCP-PDVVTFTSLIEG 369
N+L D + K G+++ Y + +F G D++T+ SLI G
Sbjct: 545 EIHGCVLRRNLDAIHAVKNALTDTYAKSGDIE-----YSRTIFLGMETKDIITWNSLIGG 599
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT-DIVP 428
Y G L L+++M T+ I+ + T S +I + E + + + I+P
Sbjct: 600 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP 659
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+ ++ Y ++ ++EA + EM
Sbjct: 660 ALEHCSAMVYLYGRANRLEEALQFIQEM 687
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 120/290 (41%), Gaps = 24/290 (8%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
FQ + V + T+N+++ Q G A L+ M+F SR F+ +S
Sbjct: 475 LFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQF------SR---FMPNSV 525
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS---H 216
++ L LL ++ V+ NL ++ N L D ++ S +
Sbjct: 526 TILSLLPACANLLGAKMVREIH-GCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLG 584
Query: 217 LETS---TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL--HGLCRIKEVD 271
+ET T+N L+GG G A N M++ G +P+ T ++++ HGL + VD
Sbjct: 585 METKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGL--MGNVD 642
Query: 272 RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
+ + + P + + ++ Y + ++++EA EM+ P + S
Sbjct: 643 EGKKVFYSIANDYHIIPALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETP---IWESF 699
Query: 332 IDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
+ G G++D A+ + LF P + T + + + Y K+ L+
Sbjct: 700 LTGCRIHGDIDMAIHAAEN-LFSLEPENTATESIVSQIYALGAKLGRSLE 748
>AT2G15980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6951349-6952845 REVERSE
LENGTH=498
Length = 498
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/440 (25%), Positives = 189/440 (42%), Gaps = 50/440 (11%)
Query: 79 LTPSLVLEVVKRL-NNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLY 137
TPS E+ L NNP L +FF FTR SLC HS + L++
Sbjct: 69 FTPSQFSEITLCLRNNPHLSLRFFLFTRRY---------------SLCSHDTHSCSTLIH 113
Query: 138 DCMRFDGKLPDS---RLLGFLVSSFALVDR-LDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
R K S RL L ++ DR L V + L+ N+ V+D L+
Sbjct: 114 ILSRSRLKSHASEIIRLALRLAATDEDEDRVLKVFRSLIKSY--NRCGSAPFVFDLLIKS 171
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL-----CSAG-------------DV 235
+ ++D A+ + R+L + + ST N L+ + S G V
Sbjct: 172 CLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLDDVSV 231
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA K + ++ P+ T+N+++ R E + + +E+ + SPNV SY
Sbjct: 232 DEAKKMIGKIK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNV 286
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ YC M EA +++EM G + +N++I G + A +++ M G
Sbjct: 287 LMEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKG 346
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC---KSNRLQ 412
+T+ L+ GYC+ G V+ GL ++ EM + A T L+ LC R+
Sbjct: 347 IECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVV 406
Query: 413 EARDLLRQLKRTDIV-PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTIL 470
EA D+++ R + P + Y ++ C+ G +D A I EM K KP + T+
Sbjct: 407 EAADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAF 466
Query: 471 IAGHCMKGRAPDAIVIFYKM 490
I G+ + G + ++ +M
Sbjct: 467 IDGYGIVGDEETSALLAIEM 486
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/260 (21%), Positives = 108/260 (41%), Gaps = 38/260 (14%)
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
FL R CS D + +TL+H L R + A ++++ L + + V+ +
Sbjct: 92 FLFTRRYSLCSHDTHSCSTLIHILSRSRLKSHASEIIR---LALRLAATDEDEDRVLKVF 148
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
SL +R G+ P F F+ LI + +D A+ + +K+ G +
Sbjct: 149 ---------RSLIKSYNRCGSAP--FVFDLLIKSCLDSKEIDGAVMVMRKLRSRGINAQI 197
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
T +LI R + G ++ E+ L SV EA+ ++ +
Sbjct: 198 STCNALITEVSRRRGASNGYKMYREV------FGLDDVSV-----------DEAKKMIGK 240
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKPDKFTFTILIAGHCMKG 478
+K P + +N ++ + + G + I EMEE+ C P+ +++ +L+ +C +G
Sbjct: 241 IK-----PNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVLMEAYCARG 295
Query: 479 RAPDAIVIFYKMLATGCSPD 498
+A ++ +M G D
Sbjct: 296 LMSEAEKVWEEMKVRGVVYD 315
>AT5G06400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily
protein | chr5:1955959-1959051 FORWARD LENGTH=1030
Length = 1030
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 172/379 (45%), Gaps = 13/379 (3%)
Query: 78 HLTPSLVLEVVKRLN---NPILGFKFFQFTREKLNVHHSFWTYNMLLR-SLCQKGLHSSA 133
TP LV+EV++ N +L +FF + ++ H+ YNM ++ + C K
Sbjct: 641 QFTPELVVEVLRHAKIQGNAVL--RFFSWVGKRNGYKHNSEAYNMSIKVAGCGKDFKQMR 698
Query: 134 KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSV 193
L Y+ MR G L ++ + +++ E + + ++ + L++V
Sbjct: 699 SLFYE-MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITV 757
Query: 194 LV--KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS 251
L K +++A FRE++RS + +G LC G+ +A L+ + G
Sbjct: 758 LCEKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF- 816
Query: 252 PDIVTYNTLLHGLCRIKEVDRA-RDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
P V Y+ + LCRI +++ A +L G +S + +Y +++ G + +++A
Sbjct: 817 PVTVAYSIYIRALCRIGKLEEALSELASFEGERSLL--DQYTYGSIVHGLLQRGDLQKAL 874
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
+ M GTKP + SLI F K ++ L +KM C P VVT+T++I GY
Sbjct: 875 DKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGY 934
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
+GKV + + M R S T+S I+ LC++ + ++A LL ++ I P
Sbjct: 935 MSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPST 994
Query: 431 SIYNHVIDGYCKSGNVDEA 449
+ V G + G D A
Sbjct: 995 INFRTVFYGLNREGKHDLA 1013
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/412 (22%), Positives = 176/412 (42%), Gaps = 40/412 (9%)
Query: 78 HLTPSLVLEVVKR-LNNPILGFKFFQFTREKLNVHHSFWTYNMLL------RSL------ 124
P +V V+KR P L +FF + ++K H YN +L R+L
Sbjct: 152 RFEPEIVENVLKRCFKVPHLAMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDEL 211
Query: 125 --------CQKGL---------HSSAK------LLYDCMRFDGKLPDSRLLGFLVSSFAL 161
C K + + AK L+++ MR G D+ ++ S +
Sbjct: 212 VSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCI 271
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
R D++ E E + Y LL + K K+D + +++R E
Sbjct: 272 AGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDA 331
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
F L+ C +G + EA + + +++ D + L+ GLCR +R D L+ V
Sbjct: 332 FGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCR---ANRMVDALEIVD 388
Query: 282 -LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+K + + Y +ISGY + + + +A F+ + +SG P T+ ++ K+
Sbjct: 389 IMKRRKLDDSNVYGIIISGYLRQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQ 448
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ ++ +M+ +G PD V T+++ G+ +V ++ M + I + ++S+
Sbjct: 449 FEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSYSI 508
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
+ LC+S+R E + Q+ + IV + I++ VI K+G ++ + I
Sbjct: 509 FVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEKNGEKEKIHLI 560
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/345 (22%), Positives = 146/345 (42%), Gaps = 3/345 (0%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
+Y+ +LS+ + LD L E+ ++ + T+ +L+ A + + M
Sbjct: 191 IYNTMLSIAGEARNLDMVDELVSEMEKNGCDKDIRTWTILISVYGKAKKIGKGLLVFEKM 250
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
R G D YN ++ LC D A + KE+ ++ + +R+Y ++ K K
Sbjct: 251 RKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEM-MEKGITFGLRTYKMLLDCIAKSEK 309
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+ S+ D+M R F L+ F G + AL + +++ D F
Sbjct: 310 VDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEI 369
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
L++G CR ++ L++ M R + S + + ++IS + N + +A + +K++
Sbjct: 370 LVKGLCRANRMVDALEIVDIMKRRKLDDS-NVYGIIISGYLRQNDVSKALEQFEVIKKSG 428
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAI 484
P+ S Y ++ K ++ + EM E +PD T ++AGH + R +A
Sbjct: 429 RPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAW 488
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+F M G P + I L +S E +I +H ++
Sbjct: 489 KVFSSMEEKGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASK 533
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 148/337 (43%), Gaps = 39/337 (11%)
Query: 238 AFKFLNGMRSF-GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
A +F N ++ G S + YNT+L + +D +L+ E+ K+ ++R++T +
Sbjct: 172 AMRFFNWVKQKDGFSHRVGIYNTMLSIAGEARNLDMVDELVSEME-KNGCDKDIRTWTIL 230
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
IS Y K K+ + +F++M +SG + +A +N +I G D AL YK+M+ G
Sbjct: 231 ISVYGKAKKIGKGLLVFEKMRKSGFELDATAYNIMIRSLCIAGRGDLALEFYKEMMEKGI 290
Query: 357 ------------------PPDVV-----------------TFTSLIEGYCRVGKVNYGLD 381
DVV F L++ +C GK+ L+
Sbjct: 291 TFGLRTYKMLLDCIAKSEKVDVVQSIADDMVRICEISEHDAFGYLLKSFCVSGKIKEALE 350
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L E+ + + F +L+ LC++NR+ +A +++ +KR + ++Y +I GY
Sbjct: 351 LIRELKNKEMCLDAKYFEILVKGLCRANRMVDALEIVDIMKRRKL-DDSNVYGIIISGYL 409
Query: 442 KSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRA-PDAIVIFYKMLATGCSPDEI 500
+ +V +A +++ +P + + I H K + +F +M+ G PD +
Sbjct: 410 RQNDVSKALEQFEVIKKSGRPPRVSTYTEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSV 469
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSY 537
+ + + L EA ++ S+ E KSY
Sbjct: 470 AITAVVAGHLGQNRVAEAWKVFSSMEEKGIKPTWKSY 506
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 145/310 (46%), Gaps = 7/310 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
YN+++RSLC G A Y M G R L+ A +++DV + + +
Sbjct: 261 AYNIMIRSLCIAGRGDLALEFYKEMMEKGITFGLRTYKMLLDCIAKSEKVDVVQSIADDM 320
Query: 176 Q--CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
C + +A Y LL K+ +A+ L REL L+ F +L+ GLC A
Sbjct: 321 VRICEISEHDAFGY--LLKSFCVSGKIKEALELIRELKNKEMCLDAKYFEILVKGLCRAN 378
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
+ +A + ++ M+ D Y ++ G R +V +A + EV KS P V +Y
Sbjct: 379 RMVDALEIVDIMKRRKLD-DSNVYGIIISGYLRQNDVSKALEQF-EVIKKSGRPPRVSTY 436
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
T ++ KL + ++ +LF+EM +G +P++ +++ G + + A ++ M
Sbjct: 437 TEIMQHLFKLKQFEKGCNLFNEMIENGIEPDSVAITAVVAGHLGQNRVAEAWKVFSSMEE 496
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
G P +++ ++ CR + + + ++++M+ I FS +IS + K N +E
Sbjct: 497 KGIKPTWKSYSIFVKELCRSSRYDEIIKIFNQMHASKIVIRDDIFSWVISSMEK-NGEKE 555
Query: 414 ARDLLRQLKR 423
L++++++
Sbjct: 556 KIHLIKEIQK 565
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 132/311 (42%), Gaps = 5/311 (1%)
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
LF E+ R + T+ +++ G + A + M+ G P T+ L+ LC
Sbjct: 700 LFYEMRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGLIPSSSTFKCLITVLC 759
Query: 266 RIK--EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
K V+ A +E+ ++S F P+ + C++ K+A S D + + G P
Sbjct: 760 EKKGRNVEEATRTFREM-IRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGF-P 817
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
++ I ++G ++ AL D T+ S++ G + G + LD
Sbjct: 818 VTVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKV 877
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+ M +H ++ LI Y K +L++ + ++++ P Y +I GY
Sbjct: 878 NSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSL 937
Query: 444 GNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
G V+EA MEE+ PD T++ I C ++ DA+ + +ML G +P I
Sbjct: 938 GKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKLLSEMLDKGIAPSTINF 997
Query: 503 RILSSCLLKSG 513
R + L + G
Sbjct: 998 RTVFYGLNREG 1008
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 11/283 (3%)
Query: 245 MRSFGC--SPDIVTYNTLLHGLCRIKEVD-RARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
MR GC + D + +G + + R +K++GL P+ ++ +I+ C
Sbjct: 704 MRRQGCLITQDTWAIMIMQYGRTGLTNIAIRTFKEMKDMGL----IPSSSTFKCLITVLC 759
Query: 302 --KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
K ++EA+ F EM RSG P+ + +VGN A + G P
Sbjct: 760 EKKGRNVEEATRTFREMIRSGFVPDRELVQDYLGCLCEVGNTKDAKSCLDSLGKIGFPV- 818
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
V ++ I CR+GK+ L +T+ ++ L + LQ+A D +
Sbjct: 819 TVAYSIYIRALCRIGKLEEALSELASFEGERSLLDQYTYGSIVHGLLQRGDLQKALDKVN 878
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKG 478
+K P +Y +I + K +++ +ME E C+P T+T +I G+ G
Sbjct: 879 SMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQKMEGESCEPSVVTYTAMICGYMSLG 938
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ +A F M G SPD T +CL ++ +A ++
Sbjct: 939 KVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACKSEDALKL 981
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 74/165 (44%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
+TY ++ L Q+G A + M+ G P + L+ F +L+ E +
Sbjct: 855 YTYGSIVHGLLQRGDLQKALDKVNSMKEIGTKPGVHVYTSLIVYFFKEKQLEKVLETCQK 914
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + V Y ++ + K+++A FR + + + T++ + LC A
Sbjct: 915 MEGESCEPSVVTYTAMICGYMSLGKVEEAWNAFRNMEERGTSPDFKTYSKFINCLCQACK 974
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
++A K L+ M G +P + + T+ +GL R + D AR L++
Sbjct: 975 SEDALKLLSEMLDKGIAPSTINFRTVFYGLNREGKHDLARIALQK 1019
>AT1G53330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:19896027-19897442 FORWARD
LENGTH=471
Length = 471
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 144/303 (47%), Gaps = 2/303 (0%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
+A Y+ L+ + DDA+ LF E+++ TF L+ GLC V EA K
Sbjct: 151 DACTYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMK 210
Query: 243 NGM-RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
+ M + +G P + Y +L+ LC+I E+ A L K+ + K + Y+T+IS
Sbjct: 211 HDMLKVYGVRPTVHIYASLIKALCQIGELSFAFKL-KDEAYEGKIKVDAAIYSTLISSLI 269
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
K + E S + +EM G KP+ T+N LI+GF + +SA + +M+ G PDV+
Sbjct: 270 KAGRSNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVI 329
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
++ ++ + R+ K L+ +M R S ++ ++ LC+ + +EA +L ++
Sbjct: 330 SYNMILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAP 481
P+ + C+SG ++ + ++ + D ++++I C +
Sbjct: 390 LFKGYKPRRDRLEGFLQKLCESGKLEILSKVISSLHRGIAGDADVWSVMIPTMCKEPVIS 449
Query: 482 DAI 484
D+I
Sbjct: 450 DSI 452
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 4/290 (1%)
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A + M + C + + N+LL L + E+++ ++ L + K P+ +Y +I
Sbjct: 102 ALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFGK--PDACTYNILI 159
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML-FHGC 356
G + +A LFDEM + KP TF +LI G K + AL + ML +G
Sbjct: 160 HGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDMLKVYGV 219
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P V + SLI+ C++G++++ L E I +S LIS L K+ R E
Sbjct: 220 RPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRSNEVSM 279
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHC 475
+L ++ P YN +I+G+C + + AN ++ EM EK KPD ++ +++
Sbjct: 280 ILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEMVEKGLKPDVISYNMILGVFF 339
Query: 476 MKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
+ +A +F M GCSPD ++ RI+ L + EAA I + +
Sbjct: 340 RIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEM 389
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 141/311 (45%), Gaps = 3/311 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+L+ Q G A L+D M P G L+ R+ + ++ +
Sbjct: 154 TYNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDM 213
Query: 176 -QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ V+ +Y +L+ L + +L A L E ++ + ++ L+ L AG
Sbjct: 214 LKVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGR 273
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+E L M GC PD VTYN L++G C + + A +L E+ ++ P+V SY
Sbjct: 274 SNEVSMILEEMSEKGCKPDTVTYNVLINGFCVENDSESANRVLDEM-VEKGLKPDVISYN 332
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++ + ++ K +EA+ LF++M R G P+ ++ + DG + + A I +MLF
Sbjct: 333 MILGVFFRIKKWEEATYLFEDMPRRGCSPDTLSYRIVFDGLCEGLQFEEAAVILDEMLFK 392
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G P ++ C GK+ + ++ R I+ +SV+I +CK + ++
Sbjct: 393 GYKPRRDRLEGFLQKLCESGKLEILSKVISSLH-RGIAGDADVWSVMIPTMCKEPVISDS 451
Query: 415 RDLLRQLKRTD 425
DLL + D
Sbjct: 452 IDLLLNTVKED 462
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 5/265 (1%)
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
N R F S ++ Y+ ++ L K D +L + ++ P + VI+ + +
Sbjct: 38 NPKRPFRYS--LLCYDIIITKLGGSKMFDELDQVLLHLKTDTRIVPTEIIFCNVINFFGR 95
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
A +FDEM + + + NSL+ +K G ++ + G PD T
Sbjct: 96 GKLPSRALHMFDEMPQYRCQRTVKSLNSLLSALLKCGELEKMKERLSSIDEFG-KPDACT 154
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ-L 421
+ LI G + G + L L+ EM + + + TF LI LCK +R++EA + L
Sbjct: 155 YNILIHGCSQSGCFDDALKLFDEMVKKKVKPTGVTFGTLIHGLCKDSRVKEALKMKHDML 214
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRA 480
K + P IY +I C+ G + A + E E K K D ++ LI+ GR+
Sbjct: 215 KVYGVRPTVHIYASLIKALCQIGELSFAFKLKDEAYEGKIKVDAAIYSTLISSLIKAGRS 274
Query: 481 PDAIVIFYKMLATGCSPDEITVRIL 505
+ +I +M GC PD +T +L
Sbjct: 275 NEVSMILEEMSEKGCKPDTVTYNVL 299
>AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532541 FORWARD
LENGTH=886
Length = 886
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 156/320 (48%), Gaps = 5/320 (1%)
Query: 86 EVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGK 145
+V+K++N+ FF + + + H TY ++ +L + + L D M DG
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
P++ L+ S+ + L+ + + + Q + + V Y L+ + K LD A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
+++ + +T T++V++ L AG + A K M GC+P++VTYN ++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 266 RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS--GYCKLSKMKEASSLFDEMDRSGTKP 323
+ + A L +++ + F P+ +Y+ V+ G+C ++EA ++F EM + P
Sbjct: 516 KARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGY--LEEAEAVFTEMQQKNWIP 572
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ + L+D + K GN++ A Y+ ML G P+V T SL+ + RV K+ +L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 384 HEMNTRNISASLHTFSVLIS 403
M + SL T+++L+S
Sbjct: 633 QNMLALGLRPSLQTYTLLLS 652
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 152/321 (47%), Gaps = 9/321 (2%)
Query: 193 VLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS 251
VL + N +A+ F L R + T+ ++G L A K L+ M GC
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
P+ VTYN L+H R ++ A ++ ++E G K P+ +Y T+I + K +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK----PDRVTYCTLIDIHAKAGFLDI 452
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A ++ M G P+ FT++ +I+ K G++ +A ++ +M+ GC P++VT+ +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
+ + L L+ +M T+S+++ L L+EA + ++++ + +P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
+Y ++D + K+GNV++A M +P+ T L++ + +A +
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 488 YKMLATGCSPDEITVRILSSC 508
MLA G P T +L SC
Sbjct: 633 QNMLALGLRPSLQTYTLLLSC 653
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
F + +YTT++ + + + L DEM R G +PN T+N LI + + ++ A+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++ +M GC PD VT+ +LI+ + + G ++ +D++ M +S T+SV+I+ L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDK 464
K+ L A L ++ P YN ++D + K+ N A + +M+ +PDK
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 465 FTFTIL--IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
T++I+ + GHC G +A +F +M PDE +L K+G
Sbjct: 540 VTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+ G K + T+ +++ + + + +M+ GC P+ VT+ LI Y R +N
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
++++++M T+ LI K+ L A D+ ++++ + P Y+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 438 DGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
+ K+G++ A+ + EM ++ C P+ T+ I++ H +A+ ++ M G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 497 PDEITVRILSSCLLKSGMPGEAARI 521
PD++T I+ L G EA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAV 561
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 107/461 (23%), Positives = 193/461 (41%), Gaps = 39/461 (8%)
Query: 73 SYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSS 132
+Y + L+ ++ ++ R N+ + E+ S + YN++LR++ +
Sbjct: 114 TYKDRQLSIRFMVSLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDI 173
Query: 133 AKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLS 192
A L+D MR PD L++SF D + L + + ++V + V+Y NL+
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSP 252
+ + AI +F L RS + +N ++ A EA + M G P
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293
Query: 253 DIVTYNTLL------HG-------LCRIKEVDRARDL---------------LKEVG--- 281
+ V+Y+TLL H +KEV+ A DL +KE
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLF 353
Query: 282 ---LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
K PNV SY T++ Y + EA LF M R + N T+N++I + K
Sbjct: 354 WSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIYGKT 413
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
+ A + ++M G P+ +T++++I + + GK++ L+ ++ + + +
Sbjct: 414 MEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEIDQVLY 473
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+I + + A+ LL +LK D +P+ + I K+G +EA + + E
Sbjct: 474 QTMIVAYERVGLMGHAKRLLHELKLPDNIPRET----AITILAKAGRTEEATWVFRQAFE 529
Query: 459 KCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+ D F +I + R + I +F KM G PD
Sbjct: 530 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPD 570
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 166/342 (48%), Gaps = 5/342 (1%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y+ +L +++ + D A LF E+ + + T++ L+ G D A +L M
Sbjct: 158 YNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKME 217
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
S D+V Y+ L+ R+ + +A + + +S +P++ +Y ++I+ Y K
Sbjct: 218 QDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLK-RSGITPDLVAYNSMINVYGKAKLF 276
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+EA L EM+ +G PN ++++L+ +V+ AL ++ +M C D+ T +
Sbjct: 277 REARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIM 336
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I+ Y ++ V L+ + +I ++ +++ ++ ++ EA L R ++R DI
Sbjct: 337 IDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDI 396
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIV 485
YN +I Y K+ ++A +V EM+ + +P+ T++ +I+ G+ A
Sbjct: 397 EQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAAT 456
Query: 486 IFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+F K+ ++G D++ + + + G+ G A R+ LHE
Sbjct: 457 LFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRL---LHE 495
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/318 (23%), Positives = 146/318 (45%), Gaps = 13/318 (4%)
Query: 209 ELMRSHSHLETSTF---NV----LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
+ +R H + S F NV L+ + + E F L+ + S ++
Sbjct: 72 QALRKHRRYQRSAFLDHNVDMDELLASIHQTQNEKELFSLLSTYKDRQLSIRF-----MV 126
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
L R + R+ LL V ++K++P+V +Y V+ + + A LFDEM +
Sbjct: 127 SLLSRENDWQRSLALLDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRAL 186
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
P+ +T+++LI F K G DSAL +KM D+V +++LIE R+ + +
Sbjct: 187 APDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAIS 246
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
++ + I+ L ++ +I+ K+ +EAR L++++ ++P Y+ ++ Y
Sbjct: 247 IFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYV 306
Query: 442 KSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
++ EA ++ EM+E C D T I+I + +A +F+ + P+ +
Sbjct: 307 ENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVV 366
Query: 501 TVRILSSCLLKSGMPGEA 518
+ + ++ + GEA
Sbjct: 367 SYNTILRVYGEAELFGEA 384
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/404 (18%), Positives = 165/404 (40%), Gaps = 70/404 (17%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
L R LC +S A ++ ++ G PD +++ + ++ L+ E
Sbjct: 234 LSRRLCD---YSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAG 290
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
V N V Y LLSV V+++K +A+ +F E+ + L+ +T N+++ V EA
Sbjct: 291 VLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYGQLDMVKEAD 350
Query: 240 KFLNGMRSFGCSPDIVTYNTLLH---------------GLCRIKEVD------------- 271
+ +R P++V+YNT+L L + K+++
Sbjct: 351 RLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIKIY 410
Query: 272 -------RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN 324
+A +L++E+ + PN +Y+T+IS + K K+ A++LF ++ SG + +
Sbjct: 411 GKTMEHEKATNLVQEMQSRG-IEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEID 469
Query: 325 AFTFNSLIDGFVKVGNM-------------------------------DSALGIYKKMLF 353
+ ++I + +VG M + A ++++
Sbjct: 470 QVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAFE 529
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
G D+ F +I Y R + ++++ +M T + +++++ K ++
Sbjct: 530 SGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNVIAMVLNAYGKQREFEK 589
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
A + R+++ V ++ ++ Y + + ++ +E
Sbjct: 590 ADTVYREMQEEGCVFPDEVHFQMLSLYSSKKDFEMVESLFQRLE 633
>AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 204/465 (43%), Gaps = 51/465 (10%)
Query: 86 EVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGK 145
+V+K++N+ FF + + + H TY ++ +L + + L D M DG
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
P++ L+ S+ + L+ + + + Q + + V Y L+ + K LD A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
+++ + +T T++V++ L AG + A K M GC+P++VTYN ++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 266 RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS--GYCKLSKMKEASSLFDEMDRSGTKP 323
+ + A L +++ + F P+ +Y+ V+ G+C ++EA ++F EM + P
Sbjct: 516 KARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGY--LEEAEAVFTEMQQKNWIP 572
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ + L+D + K GN++ A Y+ ML G P+V T SL+ + RV K+ +L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 384 HEMNTRNISASLHTFSVLIS---------------------------YLCK--------S 408
M + SL T+++L+S +L K
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE 692
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCKPD---- 463
N A + L + D + + + V+D KSG +EA ++ V ++ PD
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALRE 752
Query: 464 KFTFTILIAGHCM-KGRAPDA----IVIFYK-MLATGCSPDEITV 502
K LI H M +G A A + F K MLA+G P I +
Sbjct: 753 KSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDI 797
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 152/321 (47%), Gaps = 9/321 (2%)
Query: 193 VLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS 251
VL + N +A+ F L R + T+ ++G L A K L+ M GC
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
P+ VTYN L+H R ++ A ++ ++E G K P+ +Y T+I + K +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK----PDRVTYCTLIDIHAKAGFLDI 452
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A ++ M G P+ FT++ +I+ K G++ +A ++ +M+ GC P++VT+ +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
+ + L L+ +M T+S+++ L L+EA + ++++ + +P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
+Y ++D + K+GNV++A M +P+ T L++ + +A +
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 488 YKMLATGCSPDEITVRILSSC 508
MLA G P T +L SC
Sbjct: 633 QNMLALGLRPSLQTYTLLLSC 653
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
F + +YTT++ + + + L DEM R G +PN T+N LI + + ++ A+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++ +M GC PD VT+ +LI+ + + G ++ +D++ M +S T+SV+I+ L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDK 464
K+ L A L ++ P YN ++D + K+ N A + +M+ +PDK
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 465 FTFTIL--IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
T++I+ + GHC G +A +F +M PDE +L K+G
Sbjct: 540 VTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+ G K + T+ +++ + + + +M+ GC P+ VT+ LI Y R +N
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
++++++M T+ LI K+ L A D+ ++++ + P Y+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 438 DGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
+ K+G++ A+ + EM ++ C P+ T+ I++ H +A+ ++ M G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 497 PDEITVRILSSCLLKSGMPGEAARI 521
PD++T I+ L G EA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAV 561
>AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6529778-6532360 FORWARD
LENGTH=860
Length = 860
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 113/465 (24%), Positives = 204/465 (43%), Gaps = 51/465 (10%)
Query: 86 EVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGK 145
+V+K++N+ FF + + + H TY ++ +L + + L D M DG
Sbjct: 336 QVLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGC 395
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
P++ L+ S+ + L+ + + + Q + + V Y L+ + K LD A+
Sbjct: 396 QPNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMD 455
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
+++ + +T T++V++ L AG + A K M GC+P++VTYN ++
Sbjct: 456 MYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHA 515
Query: 266 RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVIS--GYCKLSKMKEASSLFDEMDRSGTKP 323
+ + A L +++ + F P+ +Y+ V+ G+C ++EA ++F EM + P
Sbjct: 516 KARNYQNALKLYRDM-QNAGFEPDKVTYSIVMEVLGHCGY--LEEAEAVFTEMQQKNWIP 572
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+ + L+D + K GN++ A Y+ ML G P+V T SL+ + RV K+ +L
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 384 HEMNTRNISASLHTFSVLIS---------------------------YLCK--------S 408
M + SL T+++L+S +L K
Sbjct: 633 QNMLALGLRPSLQTYTLLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGE 692
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEEKCKPD---- 463
N A + L + D + + + V+D KSG +EA ++ V ++ PD
Sbjct: 693 NVRNHANNFLDLMHSEDRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDALRE 752
Query: 464 KFTFTILIAGHCM-KGRAPDA----IVIFYK-MLATGCSPDEITV 502
K LI H M +G A A + F K MLA+G P I +
Sbjct: 753 KSCSYWLINLHVMSEGTAVTALSRTLAWFRKQMLASGTCPSRIDI 797
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 152/321 (47%), Gaps = 9/321 (2%)
Query: 193 VLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS 251
VL + N +A+ F L R + T+ ++G L A K L+ M GC
Sbjct: 337 VLKQMNDYGNALGFFYWLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQ 396
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
P+ VTYN L+H R ++ A ++ ++E G K P+ +Y T+I + K +
Sbjct: 397 PNTVTYNRLIHSYGRANYLNEAMNVFNQMQEAGCK----PDRVTYCTLIDIHAKAGFLDI 452
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A ++ M G P+ FT++ +I+ K G++ +A ++ +M+ GC P++VT+ +++
Sbjct: 453 AMDMYQRMQAGGLSPDTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMD 512
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
+ + L L+ +M T+S+++ L L+EA + ++++ + +P
Sbjct: 513 LHAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP 572
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
+Y ++D + K+GNV++A M +P+ T L++ + +A +
Sbjct: 573 DEPVYGLLVDLWGKAGNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELL 632
Query: 488 YKMLATGCSPDEITVRILSSC 508
MLA G P T +L SC
Sbjct: 633 QNMLALGLRPSLQTYTLLLSC 653
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 116/231 (50%), Gaps = 5/231 (2%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
F + +YTT++ + + + L DEM R G +PN T+N LI + + ++ A+
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLNEAM 419
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
++ +M GC PD VT+ +LI+ + + G ++ +D++ M +S T+SV+I+ L
Sbjct: 420 NVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIINCL 479
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDK 464
K+ L A L ++ P YN ++D + K+ N A + +M+ +PDK
Sbjct: 480 GKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEPDK 539
Query: 465 FTFTIL--IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
T++I+ + GHC G +A +F +M PDE +L K+G
Sbjct: 540 VTYSIVMEVLGHC--GYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAG 588
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 96/205 (46%), Gaps = 1/205 (0%)
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+ G K + T+ +++ + + + +M+ GC P+ VT+ LI Y R +N
Sbjct: 357 QPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIHSYGRANYLN 416
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
++++++M T+ LI K+ L A D+ ++++ + P Y+ +I
Sbjct: 417 EAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVII 476
Query: 438 DGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
+ K+G++ A+ + EM ++ C P+ T+ I++ H +A+ ++ M G
Sbjct: 477 NCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFE 536
Query: 497 PDEITVRILSSCLLKSGMPGEAARI 521
PD++T I+ L G EA +
Sbjct: 537 PDKVTYSIVMEVLGHCGYLEEAEAV 561
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 176/365 (48%), Gaps = 66/365 (18%)
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
+ N V ++ LLS V+++K+++A LF+ S + ++N L+GG + EA +
Sbjct: 185 EKNDVSWNALLSAYVQNSKMEEACMLFK----SRENWALVSWNCLLGGFVKKKKIVEARQ 240
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
F + M D+V++NT++ G + ++D AR L E ++ F+ +T ++SGY
Sbjct: 241 FFDSMNV----RDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFT-----WTAMVSGY 291
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP-PD 359
+ ++EA LFD+M + N ++N+++ G+V+ M+ A K LF P +
Sbjct: 292 IQNRMVEEARELFDKM----PERNEVSWNAMLAGYVQGERMEMA-----KELFDVMPCRN 342
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
V T+ ++I GY + GK++ +L+ +M R+ +++ +I+ +S EA L
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPV----SWAAMIAGYSQSGHSFEALRLFV 398
Query: 420 QLKR-----------------TDIVP---QPSIYNHVIDG---------------YCKSG 444
Q++R D+V ++ ++ G YCK G
Sbjct: 399 QMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCG 458
Query: 445 NVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VR 503
+++EAN + EM K D ++ +IAG+ G A+ F M G PD+ T V
Sbjct: 459 SIEEANDLFKEMAGK---DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVA 515
Query: 504 ILSSC 508
+LS+C
Sbjct: 516 VLSAC 520
Score = 92.0 bits (227), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/343 (22%), Positives = 162/343 (47%), Gaps = 42/343 (12%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
++S + +++++L E + + V ++ ++ V++ L A REL
Sbjct: 101 MISGYLRNGEFELARKLFDEMP----ERDLVSWNVMIKGYVRNRNLGKA----RELFEIM 152
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+ ++N ++ G G VD+A + M + V++N LL + +++ A
Sbjct: 153 PERDVCSWNTMLSGYAQNGCVDDARSVFDRM----PEKNDVSWNALLSAYVQNSKMEEAC 208
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L KS+ + + S+ ++ G+ K K+ EA FD M+ + ++N++I G
Sbjct: 209 ML-----FKSRENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVR----DVVSWNTIITG 259
Query: 335 FVKVGNMDSALGIYKKMLFHGCP-PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
+ + G +D A + LF P DV T+T+++ GY + V +L+ +M RN
Sbjct: 260 YAQSGKIDEA-----RQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKMPERNEV- 313
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP--QPSIYNHVIDGYCKSGNVDEANA 451
+++ +++ + R++ A++L D++P S +N +I GY + G + EA
Sbjct: 314 ---SWNAMLAGYVQGERMEMAKELF------DVMPCRNVSTWNTMITGYAQCGKISEAKN 364
Query: 452 IVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+ +M K D ++ +IAG+ G + +A+ +F +M G
Sbjct: 365 LFDKMP---KRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREG 404
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 116/266 (43%), Gaps = 49/266 (18%)
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
DI +N + R + A + K + S S Y +ISGY + + + A L
Sbjct: 63 DIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVS-----YNGMISGYLRNGEFELARKL 117
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP-DVVTFTSLIEGYC 371
FDEM + + ++N +I G+V+ N+ A + LF P DV ++ +++ GY
Sbjct: 118 FDEM----PERDLVSWNVMIKGYVRNRNLGKA-----RELFEIMPERDVCSWNTMLSGYA 168
Query: 372 RVGKVNYGLDLWHEMNTRN-------ISA--------------------SLHTFSVLISY 404
+ G V+ ++ M +N +SA +L +++ L+
Sbjct: 169 QNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGG 228
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDK 464
K ++ EAR + D+V +N +I GY +SG +DEA + +E D
Sbjct: 229 FVKKKKIVEARQFFDSMNVRDVVS----WNTIITGYAQSGKIDEARQL---FDESPVQDV 281
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKM 490
FT+T +++G+ +A +F KM
Sbjct: 282 FTWTAMVSGYIQNRMVEEARELFDKM 307
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/474 (18%), Positives = 194/474 (40%), Gaps = 71/474 (14%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++N LL +K A+ +D M + D +++ +A ++D +++L E+
Sbjct: 221 SWNCLLGGFVKKKKIVEARQFFDSM----NVRDVVSWNTIITGYAQSGKIDEARQLFDES 276
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V + ++S +++ +++A REL ++N ++ G +
Sbjct: 277 PVQDV----FTWTAMVSGYIQNRMVEEA----RELFDKMPERNEVSWNAMLAGYVQGERM 328
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ A + + M C ++ T+NT++ G + ++ A++L ++ + S +
Sbjct: 329 EMAKELFDVM---PCR-NVSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVS-----WAA 379
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS--------------------LIDG- 334
+I+GY + EA LF +M+R G + N +F+S L+ G
Sbjct: 380 MIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGG 439
Query: 335 --------------FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
+ K G+++ A ++K+M D+V++ ++I GY R G L
Sbjct: 440 YETGCFVGNALLLMYCKCGSIEEANDLFKEM----AGKDIVSWNTMIAGYSRHGFGEVAL 495
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT-DIVPQPSIYNHVIDG 439
+ M + T ++S + + + R + + ++P Y ++D
Sbjct: 496 RFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDL 555
Query: 440 YCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
++G +++A+ ++ M +PD + L+ + G A K+ A
Sbjct: 556 LGRAGLLEDAHNLMKNM--PFEPDAAIWGTLLGASRVHGNTELAETAADKIFAMEPENSG 613
Query: 500 ITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKK----SYYEGTNSDVPFSV 549
+ V +LS+ SG G+ +++ + + +KK S+ E N FSV
Sbjct: 614 MYV-LLSNLYASSGRWGDVGKLRVRMRDK---GVKKVPGYSWIEIQNKTHTFSV 663
>AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Pentatricopeptide repeat (PPR) superfamily
protein (TAIR:AT5G46100.1); Has 40053 Blast hits to
12380 proteins in 263 species: Archae - 4; Bacteria -
27; Metazoa - 366; Fungi - 374; Plants - 38347; Viruses
- 0; Other Eukaryotes - 935 (source: NCBI BLink). |
chr4:575843-577243 REVERSE LENGTH=466
Length = 466
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 172/388 (44%), Gaps = 11/388 (2%)
Query: 80 TPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDC 139
+P+ V +++ ++P+L + F + ++ N HS ++ +L+ L G L+ D
Sbjct: 50 SPTRVQKLIASQSDPLLAKEIFDYASQQPNFRHSRSSHLILILKL---GRGRYFNLIDDV 106
Query: 140 M---RFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVK 196
+ R G + +L+ +A + + + +L VLV
Sbjct: 107 LAKHRSSGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVS 166
Query: 197 HNK-LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
H L A LF+ T ++N+LM C D+ A++ M PD+
Sbjct: 167 HRGYLQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVD 226
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
+Y L+ G CR +V+ A +LL ++ L F P+ SYTT+++ C+ ++++EA L
Sbjct: 227 SYKILIQGFCRKGQVNGAMELLDDM-LNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCR 285
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
M G P+ +N++I GF + A + ML +GC P+ V++ +LI G C G
Sbjct: 286 MKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGM 345
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
+ G EM ++ S + L+ C +++EA D++ + + +
Sbjct: 346 FDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNGETLHSDTWEM 405
Query: 436 VIDGYCKSGNVDEANAIVVEMEEKCKPD 463
VI C N DE+ I + +E+ K +
Sbjct: 406 VIPLIC---NEDESEKIKLFLEDAVKEE 430
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 120/239 (50%), Gaps = 10/239 (4%)
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
+++A LF G PN ++N L+ F ++ A ++ KML PDV ++
Sbjct: 171 LQKAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKI 230
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
LI+G+CR G+VN ++L +M + +++ L++ LC+ +L+EA LL ++K
Sbjct: 231 LIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKG 290
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAI 484
P YN +I G+C+ +A ++ +M C P+ ++ LI G C +G +
Sbjct: 291 CNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGK 350
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKS----GMPGEAARIKESLHENQGDSLKKSYYE 539
+M++ G SP +V S+CL+K G EA + E + +N G++L +E
Sbjct: 351 KYLEEMISKGFSP-HFSV---SNCLVKGFCSFGKVEEACDVVEVVMKN-GETLHSDTWE 404
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 108/235 (45%), Gaps = 2/235 (0%)
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK-VGNMDSALGIYKKM 351
+T +I Y + ++ S F +M P N ++D V G + A ++K
Sbjct: 122 FTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQKAFELFKSS 181
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
HG P+ ++ L++ +C ++ L+ +M R++ + ++ +LI C+ ++
Sbjct: 182 RLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILIQGFCRKGQV 241
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
A +LL + VP Y +++ C+ + EA ++ M+ K C PD + +
Sbjct: 242 NGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCNPDLVHYNTM 301
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
I G C + RA DA + ML+ GCSP+ ++ R L L GM E + E +
Sbjct: 302 ILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTLIGGLCDQGMFDEGKKYLEEM 356
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 123/299 (41%), Gaps = 6/299 (2%)
Query: 198 NKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTY 257
N +DD + R S L F L+ A ++ M F +P
Sbjct: 101 NLIDDVLAKHRS---SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHL 157
Query: 258 NTLLHGLCRIKE-VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
N +L L + + +A +L K L PN RSY ++ +C + A LF +M
Sbjct: 158 NRILDVLVSHRGYLQKAFELFKSSRLHG-VMPNTRSYNLLMQAFCLNDDLSIAYQLFGKM 216
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
P+ ++ LI GF + G ++ A+ + ML G PD +++T+L+ CR ++
Sbjct: 217 LERDVVPDVDSYKILIQGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQL 276
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
L M + + L ++ +I C+ +R +AR +L + P Y +
Sbjct: 277 REAYKLLCRMKLKGCNPDLVHYNTMILGFCREDRAMDARKVLDDMLSNGCSPNSVSYRTL 336
Query: 437 IDGYCKSGNVDEANAIVVEMEEKCKPDKFTFT-ILIAGHCMKGRAPDAIVIFYKMLATG 494
I G C G DE + EM K F+ + L+ G C G+ +A + ++ G
Sbjct: 337 IGGLCDQGMFDEGKKYLEEMISKGFSPHFSVSNCLVKGFCSFGKVEEACDVVEVVMKNG 395
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 2/182 (1%)
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC-RVGKVN 377
SG F LI + + + L + KML P +++ G +
Sbjct: 113 SGYPLTGEIFTYLIKVYAEAKLPEKVLSTFYKMLEFNFTPQPKHLNRILDVLVSHRGYLQ 172
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
+L+ + + ++++L+ C ++ L A L ++ D+VP Y +I
Sbjct: 173 KAFELFKSSRLHGVMPNTRSYNLLMQAFCLNDDLSIAYQLFGKMLERDVVPDVDSYKILI 232
Query: 438 DGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
G+C+ G V+ A ++ +M K PD+ ++T L+ C K + +A + +M GC+
Sbjct: 233 QGFCRKGQVNGAMELLDDMLNKGFVPDRLSYTTLLNSLCRKTQLREAYKLLCRMKLKGCN 292
Query: 497 PD 498
PD
Sbjct: 293 PD 294
>AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20901364-20902560 FORWARD
LENGTH=398
Length = 398
Score = 119 bits (298), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 20/345 (5%)
Query: 93 NPILGFKFFQFTREKLNVHHSFWTYNMLLRSL-CQKGLHSSAKLLYDCMRFDGKLPDSRL 151
NP + F+ E + Y+ +R L K LH ++L + ++ D
Sbjct: 53 NPKRIVEKFKKACESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEEQKKYR----DMSK 108
Query: 152 LGF---LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
GF ++S + + ++++ E + + + ++ LLS K D LF
Sbjct: 109 EGFAARIISLYGKAGMFENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFN 168
Query: 209 ELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL-----H 262
EL S + ++N L+ LC + EA L+ + + G PDIVT+NTLL
Sbjct: 169 ELPGKLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTLLLSSYLK 228
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
G + E A+ + K V + ++R+Y + G +K KE +LF E+ SG K
Sbjct: 229 GQFELGEEIWAKMVEKNVAI------DIRTYNARLLGLANEAKSKELVNLFGELKASGLK 282
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P+ F+FN++I G + G MD A YK+++ HG PD TF L+ C+ G ++L
Sbjct: 283 PDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAMCKAGDFESAIEL 342
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
+ E ++ T L+ L K ++ +EA ++++ K D +
Sbjct: 343 FKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEIVKIAKTNDFL 387
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 146/348 (41%), Gaps = 38/348 (10%)
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL-CSAGD 234
+ + + N VYD + LV +L + E + + + F + L AG
Sbjct: 66 ESERFRTNIAVYDRTVRRLVAAKRLHYVEEILEE-QKKYRDMSKEGFAARIISLYGKAGM 124
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ A K M + C ++++N LL K+ D +L E+ K P++ SY
Sbjct: 125 FENAQKVFEEMPNRDCKRSVLSFNALLSAYRLSKKFDVVEELFNELPGKLSIKPDIVSYN 184
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+I C+ + EA +L DE++ G KP+ TFN+L
Sbjct: 185 TLIKALCEKDSLPEAVALLDEIENKGLKPDIVTFNTL----------------------- 221
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
L+ Y + G+ G ++W +M +N++ + T++ + L + +E
Sbjct: 222 -----------LLSSYLK-GQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKEL 269
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAG 473
+L +LK + + P +N +I G G +DEA A E+ + +PDK TF +L+
Sbjct: 270 VNLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPA 329
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
C G AI +F + + + T++ L L+K EA I
Sbjct: 330 MCKAGDFESAIELFKETFSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 101/228 (44%), Gaps = 10/228 (4%)
Query: 85 LEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDG 144
+VV+ L N + G KL++ +YN L+++LC+K A L D + G
Sbjct: 160 FDVVEELFNELPG---------KLSIKPDIVSYNTLIKALCEKDSLPEAVALLDEIENKG 210
Query: 145 KLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAI 204
PD L+ S L + ++ +E+ A+ V ++ Y+ L L K + +
Sbjct: 211 LKPDIVTFNTLLLSSYLKGQFELGEEIWAKMVEKNVAIDIRTYNARLLGLANEAKSKELV 270
Query: 205 CLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGL 264
LF EL S + +FN ++ G + G +DEA + + G PD T+ LL +
Sbjct: 271 NLFGELKASGLKPDVFSFNAMIRGSINEGKMDEAEAWYKEIVKHGYRPDKATFALLLPAM 330
Query: 265 CRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
C+ + + A +L KE ++ + ++ K SK +EA +
Sbjct: 331 CKAGDFESAIELFKET-FSKRYLVGQTTLQQLVDELVKGSKREEAEEI 377
>AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR)
repeat-containing protein | chr4:9257985-9260093 FORWARD
LENGTH=702
Length = 702
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 150/318 (47%), Gaps = 5/318 (1%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
++Y+ + V K L+ + LF E++ + +TF ++ G A ++
Sbjct: 176 ILYNVTMKVFRKSKDLEKSEKLFDEMLERGIKPDNATFTTIISCARQNGVPKRAVEWFEK 235
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M SFGC PD VT ++ R VD A L + K+ + +++T+I Y
Sbjct: 236 MSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTE-KWRIDAVTFSTLIRIYGVSG 294
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
++++EM G KPN +N LID + A IYK ++ +G P+ T+
Sbjct: 295 NYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLITNGFTPNWSTYA 354
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR-LQEARDLLRQLKR 423
+L+ Y R + L ++ EM + +S ++ ++ L+S +C NR + EA ++ + +K
Sbjct: 355 ALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLS-MCADNRYVDEAFEIFQDMKN 413
Query: 424 TDIV-PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAP 481
+ P ++ +I Y SG V EA A +++M E +P F T +I + +
Sbjct: 414 CETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEPTLFVLTSVIQCYGKAKQVD 473
Query: 482 DAIVIFYKMLATGCSPDE 499
D + F ++L G +PD+
Sbjct: 474 DVVRTFDQVLELGITPDD 491
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 135/304 (44%), Gaps = 41/304 (13%)
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
N + + S +++ YN + + K+++++ L E+ L+ P+ ++TT+IS +
Sbjct: 164 NLLETMKPSREVILYNVTMKVFRKSKDLEKSEKLFDEM-LERGIKPDNATFTTIISCARQ 222
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
K A F++M G +P+ T ++ID + + GN+D AL +Y + D VT
Sbjct: 223 NGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMALSLYDRARTEKWRIDAVT 282
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
F++LI Y G + L+++ EM + +L ++ LI + ++ R +A+ + + L
Sbjct: 283 FSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMGRAKRPWQAKIIYKDLI 342
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK----------------------- 459
P S Y ++ Y ++ D+A AI EM+EK
Sbjct: 343 TNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVILYNTLLSMCADNRYVD 402
Query: 460 --------------CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
C PD +TF+ LI + GR +A +M G P T+ +L
Sbjct: 403 EAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQMREAGFEP---TLFVL 459
Query: 506 SSCL 509
+S +
Sbjct: 460 TSVI 463
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 101/224 (45%)
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV 195
LYD R + D+ L+ + + D + E + V+ N V+Y+ L+ +
Sbjct: 267 LYDRARTEKWRIDAVTFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLIDSMG 326
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
+ + A ++++L+ + ST+ L+ A D+A M+ G S ++
Sbjct: 327 RAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLSLTVI 386
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
YNTLL + VD A ++ +++ P+ +++++I+ Y ++ EA + +
Sbjct: 387 LYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEAALLQ 446
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
M +G +P F S+I + K +D + + ++L G PD
Sbjct: 447 MREAGFEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 121/292 (41%), Gaps = 23/292 (7%)
Query: 48 KPE-AWFVKIVSTLFLHSNSLDTRVLSYFGK---------HLTPSLVLEVVKRLNNPILG 97
KP+ A F I+S N + R + +F K ++T + +++ R N +
Sbjct: 207 KPDNATFTTIISCA--RQNGVPKRAVEWFEKMSSFGCEPDNVTMAAMIDAYGRAGNVDMA 264
Query: 98 FKFFQFTR-EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
+ R EK + T++ L+R G + +Y+ M+ G P+ + L+
Sbjct: 265 LSLYDRARTEKWRIDAV--TFSTLIRIYGVSGNYDGCLNIYEEMKALGVKPNLVIYNRLI 322
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
S R +K + + N N Y L+ + DDA+ ++RE+
Sbjct: 323 DSMGRAKRPWQAKIIYKDLITNGFTPNWSTYAALVRAYGRARYGDDALAIYREMKEKGLS 382
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF-GCSPDIVTYNTLLHGLC---RIKEVDR 272
L +N L+ VDEAF+ M++ C PD T+++L+ R+ E +
Sbjct: 383 LTVILYNTLLSMCADNRYVDEAFEIFQDMKNCETCDPDSWTFSSLITVYACSGRVSEAEA 442
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN 324
A ++E G F P + T+VI Y K ++ + FD++ G P+
Sbjct: 443 ALLQMREAG----FEPTLFVLTSVIQCYGKAKQVDDVVRTFDQVLELGITPD 490
>AT1G55630.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:20791817-20793250 REVERSE
LENGTH=477
Length = 477
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 161/334 (48%), Gaps = 17/334 (5%)
Query: 96 LGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFL 155
L +KFF + + N H+ Y++L++ + G + + L D M DG + L
Sbjct: 134 LAYKFFVWCGGQENFRHTANCYHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLL 193
Query: 156 VSSFALVD-RLDVSKELLAEAQCN----KVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
+ + DV ++ + N K NA+++ +LL V K KL D + + ++
Sbjct: 194 ICTCGEAGLARDVVEQFIKSKTFNYRPYKHSYNAILH-SLLGV--KQYKLIDWV--YEQM 248
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEV 270
+ + T+N++M G D ++ L+ M G SPD+ TYN LLH L +
Sbjct: 249 LEDGFTPDVLTYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKP 308
Query: 271 DRARDLL---KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
A +LL +EVG++ P V +TT+I G + K++ DE + G P+
Sbjct: 309 LAALNLLNHMREVGVE----PGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVC 364
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
+ +I G++ G ++ A ++K+M G P+V T+ S+I G+C GK L EM
Sbjct: 365 YTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEME 424
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
+R + + +S L++ L + ++ EA ++++ +
Sbjct: 425 SRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDM 458
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 113/211 (53%), Gaps = 1/211 (0%)
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G +PD++TYN ++ R+ + DR LL E+ +K FSP++ +Y ++ +K
Sbjct: 252 GFTPDVLTYNIVMFANFRLGKTDRLYRLLDEM-VKDGFSPDLYTYNILLHHLATGNKPLA 310
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A +L + M G +P F +LIDG + G +++ + + GC PDVV +T +I
Sbjct: 311 ALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMIT 370
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
GY G++ +++ EM + ++ T++ +I C + + +EA LL++++ P
Sbjct: 371 GYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNP 430
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+Y+ +++ +G V EA+ +V +M EK
Sbjct: 431 NFVVYSTLVNNLKNAGKVLEAHEVVKDMVEK 461
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 15/321 (4%)
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
+++LM G+ + ++ M G T+N L+ C E ARD++++
Sbjct: 155 YHLLMKIFAECGEYKAMCRLIDEMIKDGYPTTACTFNLLI---CTCGEAGLARDVVEQF- 210
Query: 282 LKSK---FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
+KSK + P SY ++ + + K ++++M G P+ T+N ++ ++
Sbjct: 211 IKSKTFNYRPYKHSYNAILHSLLGVKQYKLIDWVYEQMLEDGFTPDVLTYNIVMFANFRL 270
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
G D + +M+ G PD+ T+ L+ K L+L + M + + F
Sbjct: 271 GKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHF 330
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+ LI L ++ +L+ + + + + P Y +I GY G +++A + EM E
Sbjct: 331 TTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTE 390
Query: 459 KCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGE 517
K + P+ FT+ +I G CM G+ +A + +M + GC+P+ + L + L +G E
Sbjct: 391 KGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLE 450
Query: 518 AARIKESLHENQGDSLKKSYY 538
A HE D ++K +Y
Sbjct: 451 A-------HEVVKDMVEKGHY 464
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 79/173 (45%)
Query: 114 FWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
+TYN+LL L +A L + MR G P L+ + +L+ K +
Sbjct: 292 LYTYNILLHHLATGNKPLAALNLLNHMREVGVEPGVIHFTTLIDGLSRAGKLEACKYFMD 351
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
E + V Y +++ + +L+ A +F+E+ T+N ++ G C AG
Sbjct: 352 ETVKVGCTPDVVCYTVMITGYISGGELEKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAG 411
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
EA L M S GC+P+ V Y+TL++ L +V A +++K++ K +
Sbjct: 412 KFKEACALLKEMESRGCNPNFVVYSTLVNNLKNAGKVLEAHEVVKDMVEKGHY 464
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 1/205 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+++ + + G L D M DG PD L+ A ++ + LL
Sbjct: 259 TYNIVMFANFRLGKTDRLYRLLDEMVKDGFSPDLYTYNILLHHLATGNKPLAALNLLNHM 318
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V+ + + L+ L + KL+ E ++ + + V++ G S G++
Sbjct: 319 REVGVEPGVIHFTTLIDGLSRAGKLEACKYFMDETVKVGCTPDVVCYTVMITGYISGGEL 378
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++A + M G P++ TYN+++ G C + A LLKE+ + +PN Y+T
Sbjct: 379 EKAEEMFKEMTEKGQLPNVFTYNSMIRGFCMAGKFKEACALLKEMESRG-CNPNFVVYST 437
Query: 296 VISGYCKLSKMKEASSLFDEMDRSG 320
+++ K+ EA + +M G
Sbjct: 438 LVNNLKNAGKVLEAHEVVKDMVEKG 462
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 108/480 (22%), Positives = 196/480 (40%), Gaps = 84/480 (17%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL--LA 173
TYN LL+ + G+++ A + M + DS LV+++ R SKE +
Sbjct: 318 TYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYV---RAGFSKEAAGVI 374
Query: 174 EAQCNK-VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
E K V NA+ Y ++ K K D+A+ LF + + T T+N ++ L
Sbjct: 375 EMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKK 434
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
+E K L M+S GCSP+ T+NT+L LC K +D+ + + F P+ +
Sbjct: 435 SRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDT 493
Query: 293 YTTVISGYCKLSKMKEASSLF-----------------------------------DEMD 317
+ T+IS Y + +AS ++ +M
Sbjct: 494 FNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMK 553
Query: 318 RSGTKPNAFTFNSLIDGFVKVGNM------------------------------------ 341
G KP +++ ++ + K GN
Sbjct: 554 SKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALA 613
Query: 342 --DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
+ A ++KK HG PD+V F S++ + R + + + +S L T++
Sbjct: 614 GSERAFTLFKK---HGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYN 670
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
L+ + +A ++L+ L+++ + P YN VI G+C+ G + EA ++ EM E+
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 460 -CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+P FT+ ++G+ G + + M C P+E+T +++ ++G EA
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEA 790
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 116/555 (20%), Positives = 224/555 (40%), Gaps = 74/555 (13%)
Query: 31 FTLTQLTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKR 90
FT + + A +G + + + +F ++ S + +L FGK + L V+K
Sbjct: 282 FTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKE 341
Query: 91 L------------NNPILGFKFFQFTRE---------KLNVHHSFWTYNMLLRSLCQKGL 129
+ N + + F++E K V + TY ++ + + G
Sbjct: 342 MEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGK 401
Query: 130 HSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDN 189
A L+ M+ G +P++ ++S R + ++L + + N N ++
Sbjct: 402 EDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNT 461
Query: 190 LLSVLVKHNKLDDAIC-LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
+L+ L + +D + +FRE+ + TFN L+ G +A K M
Sbjct: 462 MLA-LCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRA 520
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-FSPNVRSYTTVISGYCK----- 302
G + + TYN LL+ L R + +++ + +KSK F P SY+ ++ Y K
Sbjct: 521 GFNACVTTYNALLNALARKGDWRSGENVISD--MKSKGFKPTETSYSLMLQCYAKGGNYL 578
Query: 303 -----LSKMKE-------------------------ASSLFDEMDRSGTKPNAFTFNSLI 332
+++KE + F + G KP+ FNS++
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
F + D A GI + + G PD+VT+ SL++ Y R G+ ++ + +
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
L +++ +I C+ +QEA +L ++ I P YN + GY G E +
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758
Query: 453 VVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLK 511
+ M + C+P++ TF +++ G+C G+ +A+ K ++ C
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSK------------IKTFDPCFDD 806
Query: 512 SGMPGEAARIKESLH 526
+ A R++E+L
Sbjct: 807 QSIQRLALRVRENLE 821
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 158/357 (44%), Gaps = 11/357 (3%)
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
L+ + ++++ V + + +L + ++ A L ++ L+ + ++
Sbjct: 162 LVLSSNSGALKLDHQVIEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYS 221
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI----KEVDRARDLLKEVGLK-SK 285
G ++A M+ G SP +VTYN +L ++ +++ D ++ GLK +
Sbjct: 222 RTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDE 281
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
F+ +TV+S + ++EA F E+ G +P T+N+L+ F K G AL
Sbjct: 282 FT-----CSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 336
Query: 346 GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYL 405
+ K+M + CP D VT+ L+ Y R G + M + + + T++ +I
Sbjct: 337 SVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAY 396
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDK 464
K+ + EA L +K VP YN V+ K +E ++ +M+ C P++
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNR 456
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
T+ ++A KG +F +M + G PD T L S + G +A+++
Sbjct: 457 ATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKM 513
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 181/417 (43%), Gaps = 11/417 (2%)
Query: 119 MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCN 178
+ +R L ++ +S A L D + L D R ++ +++ + + + +L +
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 179 KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDE 237
V Y+ +L V K + I + MRS + T + ++ G + E
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A +F ++S G P VTYN LL + A +LKE+ S + +V +Y ++
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSV-TYNELV 358
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
+ Y + KEA+ + + M + G PNA T+ ++ID + K G D AL ++ M GC
Sbjct: 359 AAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCV 418
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE-ARD 416
P+ T+ +++ + + N + + +M + S + T++ +++ LC + + +
Sbjct: 419 PNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLA-LCGNKGMDKFVNR 477
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE----KCKPDKFTFTILIA 472
+ R++K P +N +I Y + G+ +A+ + EM C T+ L+
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVT---TYNALLN 534
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
KG + M + G P E + ++ C K G RI+ + E Q
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQ 591
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 185/456 (40%), Gaps = 48/456 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLL--YDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
TYN++L + G S K+L D MR G D ++S+ A L +KE A
Sbjct: 247 TYNVILDVFGKMG-RSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFA 305
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
E + + V Y+ LL V K +A+ + +E+ + ++ T+N L+ AG
Sbjct: 306 ELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNV 290
EA + M G P+ +TY T++ + + D A L +KE G PN
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC----VPNT 421
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG-IYK 349
+Y V+S K S+ E + +M +G PN T+N+++ MD + +++
Sbjct: 422 CTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTML-ALCGNKGMDKFVNRVFR 480
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+M G PD TF +LI Y R G ++ EM +A + T++ L++ L +
Sbjct: 481 EMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKG 540
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE----------- 458
+ +++ +K P + Y+ ++ Y K GN I ++E
Sbjct: 541 DWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLR 600
Query: 459 -------KC------------------KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
KC KPD F +++ A I +
Sbjct: 601 TLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED 660
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
G SPD +T L ++ G +A I ++L ++Q
Sbjct: 661 GLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQ 696
>AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397393
FORWARD LENGTH=510
Length = 510
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 7/320 (2%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK----F 241
VY L+SV+ K + A+ LF E+ S + S +N L+ D +A + +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 242 LNGMRSFG-CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
L+ M+ C P++VTYN LL + +VD+ L K++ + S SP+V ++ V+ Y
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM-SPVSPDVYTFNGVMDAY 253
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
K +KE ++ M + KP+ TFN LID + K + +K ++ P +
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
TF S+I Y + ++ ++ +MN N S T+ +I + AR++ +
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGR 479
+ +D V + S N +++ YC++G EA+ + + PD T+ L +
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADM 433
Query: 480 APDAIVIFYKMLATGCSPDE 499
++ KM G P++
Sbjct: 434 KEQVQILMKKMEKDGIVPNK 453
Score = 108 bits (271), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 6/331 (1%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
L L K +K + +FR + + ++ + ++ L+ + G A + M++
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 249 GCSPDIVTYNTL----LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
GC PD YN L LH + K +++ R L ++ + PNV +Y ++ + +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
K+ + ++LF ++D S P+ +TFN ++D + K G + + +M + C PD++TF
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
LI+ Y + + + + +L TF+ +I K+ + +A + +++
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF-TFTILIAGHCMKGRAPDA 483
+ +P Y +I Y G+V A I E+ E + K T ++ +C G +A
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
+F+ A PD T + L K+ M
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADM 433
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 151/329 (45%), Gaps = 10/329 (3%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL----- 171
Y+ L+ + +KG A L+ M+ G PD+ + L++ A + D +K L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT--AHLHTRDKAKALEKVRG 193
Query: 172 -LAEAQ-CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
L + + + Q N V Y+ LL + K+D LF++L S + TFN +M
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
G + E L MRS C PDI+T+N L+ + +E ++ K + ++SK P
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL-MRSKEKPT 312
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
+ ++ ++I Y K + +A +F +M+ P+ T+ +I + G++ A I++
Sbjct: 313 LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
++ T +++E YCR G L+H + + T+ L K++
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKAD 432
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVID 438
++ + L++++++ IVP + ++
Sbjct: 433 MKEQVQILMKKMEKDGIVPNKRFFLEALE 461
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV----KVGNM 341
+ P+ Y+ +IS K + + A LF EM SG +P+A +N+LI + K +
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 342 DSALGIYKKML-FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ G KM C P+VVT+ L+ + + GKV+ L+ +++ +S ++TF+
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEK 459
++ K+ ++E +L +++ + P +N +ID Y K ++ M K
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
KP TF +I + A +F KM P IT + ++ G G +
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECM---IMMYGYCGSVS 365
Query: 520 RIKESLHE 527
R +E E
Sbjct: 366 RAREIFEE 373
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 5/255 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+LLR+ Q G L+ + PD ++ ++ + + +L
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N+ + + + ++ L+ K + + F+ LMRS TFN ++ A +
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 236 DEAFKFLNGMRSFGCSPDIVTYN--TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
D+A M P +TY +++G C V RAR++ +EVG +S +
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVG-ESDRVLKASTL 386
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
++ YC+ EA LF P+A T+ L + K + + KKM
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 354 HGCPPDVVTFTSLIE 368
G P+ F +E
Sbjct: 447 DGIVPNKRFFLEALE 461
>AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:18395294-18397578
FORWARD LENGTH=563
Length = 563
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 147/320 (45%), Gaps = 7/320 (2%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK----F 241
VY L+SV+ K + A+ LF E+ S + S +N L+ D +A + +
Sbjct: 135 VYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKALEKVRGY 194
Query: 242 LNGMRSFG-CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
L+ M+ C P++VTYN LL + +VD+ L K++ + S SP+V ++ V+ Y
Sbjct: 195 LDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDM-SPVSPDVYTFNGVMDAY 253
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
K +KE ++ M + KP+ TFN LID + K + +K ++ P +
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTL 313
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
TF S+I Y + ++ ++ +MN N S T+ +I + AR++ +
Sbjct: 314 PTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFEE 373
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGR 479
+ +D V + S N +++ YC++G EA+ + + PD T+ L +
Sbjct: 374 VGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADM 433
Query: 480 APDAIVIFYKMLATGCSPDE 499
++ KM G P++
Sbjct: 434 KEQVQILMKKMEKDGIVPNK 453
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 149/331 (45%), Gaps = 6/331 (1%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
L L K +K + +FR + + ++ + ++ L+ + G A + M++
Sbjct: 103 LFEELGKSDKWLQCLEVFRWMQKQRWYIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNS 162
Query: 249 GCSPDIVTYNTL----LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
GC PD YN L LH + K +++ R L ++ + PNV +Y ++ + +
Sbjct: 163 GCRPDASVYNALITAHLHTRDKAKALEKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSG 222
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
K+ + ++LF ++D S P+ +TFN ++D + K G + + +M + C PD++TF
Sbjct: 223 KVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFN 282
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
LI+ Y + + + + +L TF+ +I K+ + +A + +++
Sbjct: 283 VLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDM 342
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF-TFTILIAGHCMKGRAPDA 483
+ +P Y +I Y G+V A I E+ E + K T ++ +C G +A
Sbjct: 343 NYIPSFITYECMIMMYGYCGSVSRAREIFEEVGESDRVLKASTLNAMLEVYCRNGLYIEA 402
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
+F+ A PD T + L K+ M
Sbjct: 403 DKLFHNASAFRVHPDASTYKFLYKAYTKADM 433
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 149/324 (45%), Gaps = 10/324 (3%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL----- 171
Y+ L+ + +KG A L+ M+ G PD+ + L++ A + D +K L
Sbjct: 136 YSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALIT--AHLHTRDKAKALEKVRG 193
Query: 172 -LAEAQ-CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
L + + + Q N V Y+ LL + K+D LF++L S + TFN +M
Sbjct: 194 YLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAY 253
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
G + E L MRS C PDI+T+N L+ + +E ++ K + ++SK P
Sbjct: 254 GKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSL-MRSKEKPT 312
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
+ ++ ++I Y K + +A +F +M+ P+ T+ +I + G++ A I++
Sbjct: 313 LPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECMIMMYGYCGSVSRAREIFE 372
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
++ T +++E YCR G L+H + + T+ L K++
Sbjct: 373 EVGESDRVLKASTLNAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKAD 432
Query: 410 RLQEARDLLRQLKRTDIVPQPSIY 433
++ + L++++++ IVP +
Sbjct: 433 MKEQVQILMKKMEKDGIVPNKRFF 456
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 111/248 (44%), Gaps = 9/248 (3%)
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV----KVGNM 341
+ P+ Y+ +IS K + + A LF EM SG +P+A +N+LI + K +
Sbjct: 129 YIPDNGVYSKLISVMGKKGQTRMAMWLFSEMKNSGCRPDASVYNALITAHLHTRDKAKAL 188
Query: 342 DSALGIYKKML-FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ G KM C P+VVT+ L+ + + GKV+ L+ +++ +S ++TF+
Sbjct: 189 EKVRGYLDKMKGIERCQPNVVTYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNG 248
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEK 459
++ K+ ++E +L +++ + P +N +ID Y K ++ M K
Sbjct: 249 VMDAYGKNGMIKEMEAVLTRMRSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSK 308
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
KP TF +I + A +F KM P IT + ++ G G +
Sbjct: 309 EKPTLPTFNSMIINYGKARMIDKAEWVFKKMNDMNYIPSFITYECM---IMMYGYCGSVS 365
Query: 520 RIKESLHE 527
R +E E
Sbjct: 366 RAREIFEE 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 103/255 (40%), Gaps = 5/255 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN+LLR+ Q G L+ + PD ++ ++ + + +L
Sbjct: 210 TYNILLRAFAQSGKVDQVNALFKDLDMSPVSPDVYTFNGVMDAYGKNGMIKEMEAVLTRM 269
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N+ + + + ++ L+ K + + F+ LMRS TFN ++ A +
Sbjct: 270 RSNECKPDIITFNVLIDSYGKKQEFEKMEQTFKSLMRSKEKPTLPTFNSMIINYGKARMI 329
Query: 236 DEAFKFLNGMRSFGCSPDIVTYN--TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
D+A M P +TY +++G C V RAR++ +EVG +S +
Sbjct: 330 DKAEWVFKKMNDMNYIPSFITYECMIMMYGYC--GSVSRAREIFEEVG-ESDRVLKASTL 386
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
++ YC+ EA LF P+A T+ L + K + + KKM
Sbjct: 387 NAMLEVYCRNGLYIEADKLFHNASAFRVHPDASTYKFLYKAYTKADMKEQVQILMKKMEK 446
Query: 354 HGCPPDVVTFTSLIE 368
G P+ F +E
Sbjct: 447 DGIVPNKRFFLEALE 461
>AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:6328519-6329970 REVERSE
LENGTH=483
Length = 483
Score = 117 bits (292), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 177/421 (42%), Gaps = 9/421 (2%)
Query: 54 VKIVSTLFLHSNSLDTRVLSYFGKH--LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVH 111
K VST+ ++S F P E++K NN + FF++ +
Sbjct: 51 AKTVSTIMRERQRWQQTLVSDFPSFDFADPLFFGELLKSQNNVLFSLWFFRWLCSNYDYT 110
Query: 112 HSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
+ N+L +L +AK D F P+ LL V + ++ + E+
Sbjct: 111 PGPVSLNILFGALLDGKAVKAAKSFLDTTGFK---PEPTLLEQYVKCLSEEGLVEEAIEV 167
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
+ + + V +++L +K KLD L +E++ S ++ L+ LC
Sbjct: 168 YNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMV--ESEFDSERIRCLIRALCD 225
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
GDV E ++ L G P Y L+ G C I ++L + + F P++
Sbjct: 226 GGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNHF-PSMY 284
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
Y +I G C K EA +F + G P+ + ++I GF + G + SA ++ +M
Sbjct: 285 IYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARKLWFEM 344
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
+ G P+ + +I G+ + G+++ ++EM ++ + + +I C +
Sbjct: 345 IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKGFCSHGKS 404
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTIL 470
EA ++ + + T + P YN +I G+CK V++ + E++ KP + L
Sbjct: 405 DEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPSGMAYAAL 464
Query: 471 I 471
+
Sbjct: 465 V 465
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 126/263 (47%), Gaps = 9/263 (3%)
Query: 160 ALVDRLDVSK--ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL--MRSHS 215
AL D DVS+ ELL + + VY L+S + + + C+ L M + +
Sbjct: 222 ALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCE---IGNYACMSEVLHTMIAWN 278
Query: 216 HLETS-TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
H + + ++ GLC EA+ ++ G +PD V Y T++ G C + AR
Sbjct: 279 HFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSAR 338
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
L E+ +K PN +Y +I G+ K ++ + ++EM R+G + N++I G
Sbjct: 339 KLWFEM-IKKGMRPNEFAYNVMIHGHFKRGEISLVEAFYNEMLRNGYGGTMLSCNTMIKG 397
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
F G D A I+K M G P+ +T+ +LI+G+C+ KV GL L+ E+ + S
Sbjct: 398 FCSHGKSDEAFEIFKNMSETGVTPNAITYNALIKGFCKENKVEKGLKLYKELKALGLKPS 457
Query: 395 LHTFSVLISYLCKSNRLQEARDL 417
++ L+ L S+ + + +L
Sbjct: 458 GMAYAALVRNLKMSDSVATSLNL 480
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 15/268 (5%)
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK-LSK---M 306
+P V+ N L L K V A+ L G K + T++ Y K LS+ +
Sbjct: 110 TPGPVSLNILFGALLDGKAVKAAKSFLDTTGFKPE--------PTLLEQYVKCLSEEGLV 161
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+EA +++ + G + T NS++ G +K +D ++K+M+ D L
Sbjct: 162 EEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARKLDRFWELHKEMV--ESEFDSERIRCL 219
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I C G V+ G +L + + + + ++ LIS C+ ++L + +
Sbjct: 220 IRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAKLISGFCEIGNYACMSEVLHTMIAWNH 279
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIV 485
P IY +I G C + EA I +++K PD+ +T +I G C KG A
Sbjct: 280 FPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKGYAPDRVVYTTMIRGFCEKGWLGSARK 339
Query: 486 IFYKMLATGCSPDEITVRILSSCLLKSG 513
++++M+ G P+E ++ K G
Sbjct: 340 LWFEMIKKGMRPNEFAYNVMIHGHFKRG 367
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 92/220 (41%), Gaps = 8/220 (3%)
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
+D +G KP + + G ++ A+ +Y + G VVT S++ G + K
Sbjct: 136 LDTTGFKPEPTLLEQYVKCLSEEGLVEEAIEVYNVLKDMGISSSVVTCNSVLLGCLKARK 195
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
++ +L EM + LI LC + E +LL+Q + + P +Y
Sbjct: 196 LDRFWELHKEMVESEFDS--ERIRCLIRALCDGGDVSEGYELLKQGLKQGLDPGQYVYAK 253
Query: 436 VIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
+I G+C+ GN + ++ M P + + +I G CM + +A IF + G
Sbjct: 254 LISGFCEIGNYACMSEVLHTMIAWNHFPSMYIYQKIIKGLCMNKKQLEAYCIFKNLKDKG 313
Query: 495 CSPDEITVRILSSCLLKSGMPGEAAR-----IKESLHENQ 529
+PD + + + G G A + IK+ + N+
Sbjct: 314 YAPDRVVYTTMIRGFCEKGWLGSARKLWFEMIKKGMRPNE 353
>AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3639908-3643974 FORWARD
LENGTH=664
Length = 664
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 173/362 (47%), Gaps = 17/362 (4%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK--ELLAEA 175
N++LR G L++ M+ GK+ S S V +VSK E+
Sbjct: 102 NVILRDFGISGRWQDLIQLFEWMQQHGKISVSTY----SSCIKFVGAKNVSKALEIYQSI 157
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD- 234
++N + +++LS LVK+ KLD I LF ++ R + T+N L+ G +
Sbjct: 158 PDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLAGCIKVKNG 217
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+A + + + G D V Y T+L + A + ++++ ++ SPN+ Y+
Sbjct: 218 YPKAIELIGELPHNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEG-HSPNIYHYS 276
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++++ Y K+A L EM G PN +L+ ++K G D + + ++
Sbjct: 277 SLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESA 336
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G + + + L++G + GK+ ++ +M + + + + S++IS LC+S R +EA
Sbjct: 337 GYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEA 396
Query: 415 RDLLRQLKRT----DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTI 469
++L R + T D+V + N ++ YC++G ++ ++ +M+E+ PD TF I
Sbjct: 397 KELSRDSETTYEKCDLV----MLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHI 452
Query: 470 LI 471
LI
Sbjct: 453 LI 454
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 142/316 (44%), Gaps = 7/316 (2%)
Query: 203 AICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH 262
A+ +++ + + + N ++ L G +D K + M+ G PD+VTYNTLL
Sbjct: 150 ALEIYQSIPDESTKINVYICNSILSCLVKNGKLDSCIKLFDQMKRDGLKPDVVTYNTLLA 209
Query: 263 GLCRIKE-VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
G ++K +A +L+ E+ + + Y TV++ + +EA + +M G
Sbjct: 210 GCIKVKNGYPKAIELIGELP-HNGIQMDSVMYGTVLAICASNGRSEEAENFIQQMKVEGH 268
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
PN + ++SL++ + G+ A + +M G P+ V T+L++ Y + G + +
Sbjct: 269 SPNIYHYSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRSRE 328
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L E+ + + + + +L+ L K+ +L+EAR + +K + + +I C
Sbjct: 329 LLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISALC 388
Query: 442 KSGNVDEANAIVVEME---EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+S EA + + E EKC D ++ +C G + + KM SPD
Sbjct: 389 RSKRFKEAKELSRDSETTYEKC--DLVMLNTMLCAYCRAGEMESVMRMMKKMDEQAVSPD 446
Query: 499 EITVRILSSCLLKSGM 514
T IL +K +
Sbjct: 447 YNTFHILIKYFIKEKL 462
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 95/221 (42%), Gaps = 1/221 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
Y +L G A+ M+ +G P+ L++S++ + EL+ E +
Sbjct: 240 YGTVLAICASNGRSEEAENFIQQMKVEGHSPNIYHYSSLLNSYSWKGDYKKADELMTEMK 299
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ N V+ LL V +K D + L EL + + +LM GL AG ++
Sbjct: 300 SIGLVPNKVMMTTLLKVYIKGGLFDRSRELLSELESAGYAENEMPYCMLMDGLSKAGKLE 359
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + M+ G D + ++ LCR K A++L ++ + ++ T+
Sbjct: 360 EARSIFDDMKGKGVRSDGYANSIMISALCRSKRFKEAKELSRDSETTYE-KCDLVMLNTM 418
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
+ YC+ +M+ + +MD P+ TF+ LI F+K
Sbjct: 419 LCAYCRAGEMESVMRMMKKMDEQAVSPDYNTFHILIKYFIK 459
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 105/245 (42%), Gaps = 5/245 (2%)
Query: 109 NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
N++H Y+ LL S KG + A L M+ G +P+ ++ L+ + D S
Sbjct: 271 NIYH----YSSLLNSYSWKGDYKKADELMTEMKSIGLVPNKVMMTTLLKVYIKGGLFDRS 326
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+ELL+E + N + Y L+ L K KL++A +F ++ + ++++
Sbjct: 327 RELLSELESAGYAENEMPYCMLMDGLSKAGKLEEARSIFDDMKGKGVRSDGYANSIMISA 386
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
LC + EA + + D+V NT+L CR E++ ++K++ + SP
Sbjct: 387 LCRSKRFKEAKELSRDSETTYEKCDLVMLNTMLCAYCRAGEMESVMRMMKKMD-EQAVSP 445
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
+ ++ +I + K A +M G + +SLI K+ A +Y
Sbjct: 446 DYNTFHILIKYFIKEKLHLLAYQTTLDMHSKGHRLEEELCSSLIYHLGKIRAQAEAFSVY 505
Query: 349 KKMLF 353
+ +
Sbjct: 506 NMLRY 510
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 116 bits (291), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 139/265 (52%), Gaps = 32/265 (12%)
Query: 232 AGDVDEAFKFLNGMRSFGCS---PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
+ D D + + N +RS S P + L+ LC++ ++ AR L GL +
Sbjct: 21 SSDNDRSVQLFNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFD--GLPER--- 75
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
+V ++T VI+GY KL M+EA LFD +D ++ N T+ +++ G+++ + A
Sbjct: 76 DVVTWTHVITGYIKLGDMREARELFDRVD---SRKNVVTWTAMVSGYLRSKQLSIA---- 128
Query: 349 KKMLFHGCPP-DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+MLF P +VV++ ++I+GY + G+++ L+L+ EM RNI +++ ++ L +
Sbjct: 129 -EMLFQEMPERNVVSWNTMIDGYAQSGRIDKALELFDEMPERNIV----SWNSMVKALVQ 183
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDK--F 465
R+ EA +L ++ R D+V + ++DG K+G VDEA + C P++
Sbjct: 184 RGRIDEAMNLFERMPRRDVVS----WTAMVDGLAKNGKVDEARRLF-----DCMPERNII 234
Query: 466 TFTILIAGHCMKGRAPDAIVIFYKM 490
++ +I G+ R +A +F M
Sbjct: 235 SWNAMITGYAQNNRIDEADQLFQVM 259
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 163/335 (48%), Gaps = 58/335 (17%)
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
L R + S S L+G LC G + EA K +G+ D+VT+ ++ G
Sbjct: 33 LVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGL----PERDVVTWTHVITGYI 88
Query: 266 RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNA 325
++ ++ AR+L V + NV ++T ++SGY + ++ A LF EM + N
Sbjct: 89 KLGDMREARELFDRVDSRK----NVVTWTAMVSGYLRSKQLSIAEMLFQEM----PERNV 140
Query: 326 FTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHE 385
++N++IDG+ + G +D AL ++ +M ++V++ S+++ + G+++ ++L+
Sbjct: 141 VSWNTMIDGYAQSGRIDKALELFDEM----PERNIVSWNSMVKALVQRGRIDEAMNLFER 196
Query: 386 MNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI--YNHVIDGYCKS 443
M R++ +++ ++ L K+ ++ EAR L D +P+ +I +N +I GY ++
Sbjct: 197 MPRRDVV----SWTAMVDGLAKNGKVDEARRLF------DCMPERNIISWNAMITGYAQN 246
Query: 444 GNVDEANAIVV---------------------EMEEKCK-----PDK--FTFTILIAGHC 475
+DEA+ + EM + C P+K ++T +I G+
Sbjct: 247 NRIDEADQLFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYV 306
Query: 476 MKGRAPDAIVIFYKMLATG-CSPDEIT-VRILSSC 508
+A+ +F KML G P+ T V ILS+C
Sbjct: 307 ENKENEEALNVFSKMLRDGSVKPNVGTYVSILSAC 341
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/416 (18%), Positives = 179/416 (43%), Gaps = 59/416 (14%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF--LVSSFALVDRLDVSKELLA 173
++N ++++L Q+G A L++ ++P ++ + +V A ++D ++ L
Sbjct: 173 SWNSMVKALVQRGRIDEAMNLFE------RMPRRDVVSWTAMVDGLAKNGKVDEARRLF- 225
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
C + N + ++ +++ ++N++D+A LF+ + + +++N ++ G
Sbjct: 226 --DCMP-ERNIISWNAMITGYAQNNRIDEADQLFQVM----PERDFASWNTMITGFIRNR 278
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
++++A + M +++++ T++ G KE + A ++ ++ PNV +Y
Sbjct: 279 EMNKACGLFDRM----PEKNVISWTTMITGYVENKENEEALNVFSKMLRDGSVKPNVGTY 334
Query: 294 TTVISGYCKLSKMKEA-------------------SSLFDEMDRSGT------------- 321
+++S L+ + E S+L + +SG
Sbjct: 335 VSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLNMYSKSGELIAARKMFDNGLV 394
Query: 322 -KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
+ + ++NS+I + G+ A+ +Y +M HG P VT+ +L+ G V G+
Sbjct: 395 CQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSAVTYLNLLFACSHAGLVEKGM 454
Query: 381 DLWHEMNTRNISASLHT--FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
+ + ++ R+ S L ++ L+ ++ RL +D+ + D S Y ++
Sbjct: 455 EFFKDL-VRDESLPLREEHYTCLVDLCGRAGRL---KDVTNFINCDDARLSRSFYGAILS 510
Query: 439 GYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
V A +V ++ E D T+ ++ + G+ +A + KM G
Sbjct: 511 ACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREEAAEMRMKMKEKG 566
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/478 (21%), Positives = 206/478 (43%), Gaps = 45/478 (9%)
Query: 92 NNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRL 151
NN LG KL+ TYN+L+ + A + M+ DG PD
Sbjct: 345 NNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVS 404
Query: 152 LGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL- 210
L+ +F++ ++ ++ L+AE + V+++ L + V+ L+ + F+
Sbjct: 405 YRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFH 464
Query: 211 ----MRSHSH----------------------------LETSTFNVLMGGLCSAGDVDEA 238
M S + +NV++ + ++A
Sbjct: 465 VAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKA 524
Query: 239 FKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR---DLLKEVGLKSKFSPNVRSYTT 295
+ M S+G +PD TYNTL+ L + R + ++E G S P Y
Sbjct: 525 CELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRETGYVSDCIP----YCA 580
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
VIS + KL ++ A ++ EM +P+ + LI+ F GN+ A+ + M G
Sbjct: 581 VISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAG 640
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM---NTRNISASLHTFSVLISYLCKSNRLQ 412
P + V + SLI+ Y +VG ++ ++ ++ + ++T + +I+ + + ++
Sbjct: 641 IPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVR 700
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILI 471
+A + +K+ + + + ++ Y K+G +EA I +M E K D ++ ++
Sbjct: 701 KAEAIFDSMKQRGEANEFT-FAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVL 759
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+ GR +A+ F +M+++G PD+ T + L + L+K GM +A R E + + +
Sbjct: 760 GLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKAVRKIEEIRKKE 817
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 148/387 (38%), Gaps = 42/387 (10%)
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
++N + Y+ +L +L K K L+ E++R ST+ L+ G A
Sbjct: 184 ELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGTLIDVYSKGGLKVHALC 243
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK-----EVGLKSKFSPNVRSYTT 295
+L M G PD VT +L + +E +A + K E S + +Y T
Sbjct: 244 WLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDENKADSHVCLSSYTYNT 303
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I Y K ++KEAS F M G P TFN++I + G + + K M H
Sbjct: 304 MIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLH- 362
Query: 356 CPPDVVTFTSLIEGYCRVGKVN-------------------------YGLDLWH------ 384
C PD T+ LI + + + Y + H
Sbjct: 363 CAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAE 422
Query: 385 ----EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
EM+ N+ +T S L ++ L+++ ++ + Y+ ID Y
Sbjct: 423 GLIAEMDDDNVEIDEYTQSALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEG-YSANIDAY 481
Query: 441 CKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
+ G + EA + + +E K + ++I + + A +F M++ G +PD+
Sbjct: 482 GERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVTPDKC 541
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHE 527
T L L + MP + E + E
Sbjct: 542 TYNTLVQILASADMPHKGRCYLEKMRE 568
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 110/241 (45%), Gaps = 6/241 (2%)
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
+RA ++ + K + NV Y ++ K K + SL+DEM R G KP T+ +
Sbjct: 168 ERAVEIFEWFKSKGCYELNVIHYNIMLRILGKACKWRYVQSLWDEMIRKGIKPINSTYGT 227
Query: 331 LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN 390
LID + K G AL KM G PD VT +++ Y + + + + + +
Sbjct: 228 LIDVYSKGGLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFKKWSCDE 287
Query: 391 ISASLH------TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
A H T++ +I KS +++EA + +++ IVP +N +I Y +G
Sbjct: 288 NKADSHVCLSSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNG 347
Query: 445 NVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRI 504
+ E +++ M+ C PD T+ ILI+ H A F +M G PD ++ R
Sbjct: 348 QLGEVTSLMKTMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYRT 407
Query: 505 L 505
L
Sbjct: 408 L 408
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 89/418 (21%), Positives = 165/418 (39%), Gaps = 81/418 (19%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
V ++ ++ + + +L + L + M+ H +T T+N+L+ D++ A +
Sbjct: 334 VTFNTMIHIYGNNGQLGEVTSLMK-TMKLHCAPDTRTYNILISLHTKNNDIERAGAYFKE 392
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG----------------------- 281
M+ G PD V+Y TLL+ V+ A L+ E+
Sbjct: 393 MKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQSALTRMYVEAEM 452
Query: 282 LKSKFSPNVR----------SYTTVISGYCKLSKMKEASSLF---DEMDRSGTKPNAFTF 328
L+ +S R Y+ I Y + + EA +F E++ K +
Sbjct: 453 LEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVN----KRTVIEY 508
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE-------------------- 368
N +I + + + A +++ M+ +G PD T+ +L++
Sbjct: 509 NVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRE 568
Query: 369 --------GYC-------RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
YC ++G++N +++ EM NI + + VLI+ + +Q+
Sbjct: 569 TGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQ 628
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK----PDKFTFTI 469
A + +K I IYN +I Y K G +DEA AI ++ + C PD +T
Sbjct: 629 AMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNC 688
Query: 470 LIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+I + + A IF M G +E T ++ K+G EA +I + + E
Sbjct: 689 MINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMRE 745
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/314 (22%), Positives = 147/314 (46%), Gaps = 7/314 (2%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN+++++ A L++ M G PD LV A D + L + +
Sbjct: 508 YNVMIKAYGISKSCEKACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMR 567
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + Y ++S VK +L+ A +++E++ + + + VL+ G+V
Sbjct: 568 ETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQ 627
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA----RDLLKEVGLKSKFSPNVRS 292
+A ++ M+ G + V YN+L+ ++ +D A R LL+ K+++ P+V +
Sbjct: 628 QAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCN-KTQY-PDVYT 685
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
+I+ Y + S +++A ++FD M + G + N FTF ++ + K G + A I K+M
Sbjct: 686 SNCMINLYSERSMVRKAEAIFDSMKQRG-EANEFTFAMMLCMYKKNGRFEEATQIAKQMR 744
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
D +++ S++ + G+ ++ + EM + I TF L + L K +
Sbjct: 745 EMKILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSK 804
Query: 413 EARDLLRQLKRTDI 426
+A + ++++ +I
Sbjct: 805 KAVRKIEEIRKKEI 818
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 174/408 (42%), Gaps = 35/408 (8%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
L+ + RL+ + L +E + V ++ V ++ ++ H L +A L +++
Sbjct: 311 LIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEEKG 370
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
+T T+N+L+ AGD++ A ++ +R G PD VT+ +LH LC+ K V
Sbjct: 371 ISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQRKMVAEVE 430
Query: 275 DLLKEV-----------------------------GLKSKFSPN-VRSYTT---VISGYC 301
++ E+ L +F + V S TT VI Y
Sbjct: 431 AVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVIDVYA 490
Query: 302 KLSKMKEASSLF-DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
+ EA ++F + + SG + + +N +I + K + AL ++K M G PD
Sbjct: 491 EKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDE 550
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
T+ SL + V V+ + EM T++ +I+ + L +A DL
Sbjct: 551 CTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEA 610
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGR 479
+++T + P +Y +I+G+ +SG V+EA MEE + + T LI + G
Sbjct: 611 MEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGC 670
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+A ++ KM + PD + S G+ EA I +L E
Sbjct: 671 LEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALRE 718
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 147/302 (48%), Gaps = 10/302 (3%)
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
+NV++ A ++A GM++ G PD TYN+L L + VD A+ +L E+
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEM- 576
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
L S P ++Y +I+ Y +L + +A L++ M+++G KPN + SLI+GF + G +
Sbjct: 577 LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMV 636
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
+ A+ ++ M HG + + TSLI+ Y +VG + ++ +M + + +
Sbjct: 637 EEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSM 696
Query: 402 ISYLCKSNRLQEARDL---LRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+S + EA + LR+ D++ + ++ Y G +DEA + EM E
Sbjct: 697 LSLCADLGIVSEAESIFNALREKGTCDVIS----FATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 459 K-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT-GCSPDEITVRILSSCLLKSGMPG 516
D +F ++A + G+ + +F++ML D T + L + L K G+P
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 517 EA 518
EA
Sbjct: 813 EA 814
Score = 115 bits (288), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 160/351 (45%), Gaps = 18/351 (5%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
++ L+ + K +L+DA LF E+++S ++T TFN ++ + G + EA L M
Sbjct: 308 FNTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKME 367
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
G SPD TYN LL +++ A + +++ K P+ ++ V+ C+ +
Sbjct: 368 EKGISPDTKTYNILLSLHADAGDIEAALEYYRKI-RKVGLFPDTVTHRAVLHILCQRKMV 426
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
E ++ EMDR+ + + + ++ +V G + A ++++ C T ++
Sbjct: 427 AEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLD-CVLSSTTLAAV 485
Query: 367 IEGYCRVGKVNYGLDLWHEMNT-----RNISASLH---TFSVLISYLCKSNRLQEARDLL 418
I+ Y G LW E T RN+S + ++V+I K+ ++A L
Sbjct: 486 IDVYAEKG-------LWVEAETVFYGKRNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLF 538
Query: 419 RQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMK 477
+ +K P YN + VDEA I+ EM + CKP T+ +IA +
Sbjct: 539 KGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRL 598
Query: 478 GRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
G DA+ ++ M TG P+E+ L + +SGM EA + + E+
Sbjct: 599 GLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMMEEH 649
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 176/400 (44%), Gaps = 43/400 (10%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN+++++ + LH A L+ M+ G PD L A VD +D ++ +LAE
Sbjct: 518 YNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAEML 577
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ + Y +++ V+ L DA+ L+ + ++ + L+ G +G V+
Sbjct: 578 DSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVE 637
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI---KEVDRARDLLKEVGLKSKFSPNVRSY 293
EA ++ M G + + +L+ ++ +E R D +K+ S+ P+V +
Sbjct: 638 EAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKD----SEGGPDVAAS 693
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
+++S L + EA S+F+ + GT + +F +++ + +G +D A+ + ++M
Sbjct: 694 NSMLSLCADLGIVSEAESIFNALREKGT-CDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM-NTRNISASLHTFSVLISYLCKS---- 408
G D +F ++ Y G+++ +L+HEM R + TF L + L K
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 409 ---NRLQ----EARDLL----------------------RQLKRTDIVPQPSIYNHVIDG 439
++LQ EA+ L ++L +I + YN VI
Sbjct: 813 EAVSQLQTAYNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHFAYNAVIYT 872
Query: 440 YCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKG 478
Y SG++D A + M+EK +PD T L+ + G
Sbjct: 873 YSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAG 912
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 175/429 (40%), Gaps = 33/429 (7%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N ++ + G S A+ L M G PD++ L+S A D D+ L
Sbjct: 342 TFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHA--DAGDIEAALEYYR 399
Query: 176 QCNKVQV--NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ KV + + V + +L +L + + + + E+ R+ ++ + V+M + G
Sbjct: 400 KIRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEG 459
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL----------- 282
V +A + D V +T L + D+ E GL
Sbjct: 460 LVVQAKALFERFQL-----DCVLSSTTLAAVI---------DVYAEKGLWVEAETVFYGK 505
Query: 283 --KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
S +V Y +I Y K ++A SLF M GT P+ T+NSL V
Sbjct: 506 RNMSGQRNDVLEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDL 565
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+D A I +ML GC P T+ ++I Y R+G ++ +DL+ M + + +
Sbjct: 566 VDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGS 625
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-K 459
LI+ +S ++EA R ++ + + +I Y K G ++EA + +M++ +
Sbjct: 626 LINGFAESGMVEEAIQYFRMMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSE 685
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
PD +++ G +A IF + G D I+ + GM EA
Sbjct: 686 GGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTC-DVISFATMMYLYKGMGMLDEAI 744
Query: 520 RIKESLHEN 528
+ E + E+
Sbjct: 745 EVAEEMRES 753
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/473 (21%), Positives = 195/473 (41%), Gaps = 38/473 (8%)
Query: 78 HLTP---SLVLEVVKRLNNPILGFKFFQFTREKL-NVHHSFWTYNMLLRSLCQKGLHSSA 133
+L+P +++L+ R + F+FFQ + + NV H YN++LR+L + G
Sbjct: 109 NLSPKEQTVLLKEQTRWERVLRVFRFFQSHQSYVPNVIH----YNIVLRALGRAGKWDEL 164
Query: 134 KLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQV---NAVVYDNL 190
+L + M +G LP + G LV + + + KE L + ++ + V +
Sbjct: 165 RLCWIEMAHNGVLPTNNTYGMLVDVYG---KAGLVKEALLWIKHMGQRMHFPDEVTMATV 221
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFN-------------------VLMGGLCS 231
+ V + D A F+ L+ + + + + + +
Sbjct: 222 VRVFKNSGEFDRADRFFKGWCAGKVDLDLDSIDDFPKNGSAQSPVNLKQFLSMELFKVGA 281
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIV-TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
++++ F +G S P + T+NTL+ + ++ A +L E+ LKS +
Sbjct: 282 RNPIEKSLHFASGSDSSPRKPRLTSTFNTLIDLYGKAGRLNDAANLFSEM-LKSGVPIDT 340
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
++ T+I + EA SL +M+ G P+ T+N L+ G++++AL Y+K
Sbjct: 341 VTFNTMIHTCGTHGHLSEAESLLKKMEEKGISPDTKTYNILLSLHADAGDIEAALEYYRK 400
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
+ G PD VT +++ C+ V + EM+ +I H+ V++
Sbjct: 401 IRKVGLFPDTVTHRAVLHILCQRKMVAEVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGL 460
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC--KPDKFTFT 468
+ +A+ L + + D V + VID Y + G EA + + D +
Sbjct: 461 VVQAKALFERFQ-LDCVLSSTTLAAVIDVYAEKGLWVEAETVFYGKRNMSGQRNDVLEYN 519
Query: 469 ILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
++I + A+ +F M G PDE T L L + EA RI
Sbjct: 520 VMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRI 572
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 115 bits (289), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 162/368 (44%), Gaps = 33/368 (8%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N ++++LS K +DDAI L E+ + T+N L+ G S G +A L
Sbjct: 154 NLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVL 213
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL------------------LKEVGLKS 284
M+ G P + ++LL + + + + L ++ +K+
Sbjct: 214 KRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKT 273
Query: 285 KFSP------------NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
+ P N+ ++ +++SG +K+A +L M++ G KP+A T+NSL
Sbjct: 274 GYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLA 333
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
G+ +G + AL + KM G P+VV++T++ G + G L ++ +M +
Sbjct: 334 SGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVG 393
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
+ T S L+ L + L +++ R +++ + ++D Y KSG++ A I
Sbjct: 394 PNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEI 453
Query: 453 VVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKS 512
++ K ++ ++ G+ M GR + I F ML G PD IT + S S
Sbjct: 454 FWGIKNKSLA---SWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNS 510
Query: 513 GMPGEAAR 520
G+ E +
Sbjct: 511 GLVQEGWK 518
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/357 (22%), Positives = 162/357 (45%), Gaps = 45/357 (12%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
+ ++ ++ V ++ + A+ LFRE+ S + ST L+ + E +
Sbjct: 55 LAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGY 114
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
+ G ++ N+L+ R +++ +R + S N+ S+ +++S Y KL
Sbjct: 115 VLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFN-----SMKDRNLSSWNSILSSYTKLG 169
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ +A L DEM+ G KP+ T+NSL+ G+ G A+ + K+M G P + +
Sbjct: 170 YVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSIS 229
Query: 365 SLIE-----GYCRVGKVNYGL----DLWHE--------------------------MNTR 389
SL++ G+ ++GK +G LW++ M+ +
Sbjct: 230 SLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAK 289
Query: 390 NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA 449
NI A ++ L+S L + L++A L+ ++++ I P +N + GY G ++A
Sbjct: 290 NIVA----WNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKA 345
Query: 450 NAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
++ +M+EK P+ ++T + +G G +A+ +F KM G P+ T+ L
Sbjct: 346 LDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTL 402
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/387 (23%), Positives = 163/387 (42%), Gaps = 53/387 (13%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N LL KGL A + M+ G P + + L+ + A L + K +
Sbjct: 192 TWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYI 251
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N++ + V L+ + +K L A +F ++M + + + +N L+ GL A +
Sbjct: 252 LRNQLWYDVYVETTLIDMYIKTGYLPYARMVF-DMMDAKNIV---AWNSLVSGLSYACLL 307
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+A + M G PD +T+N+L G + + ++A D++ ++ K +PNV S+T
Sbjct: 308 KDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKG-VAPNVVSWTA 366
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFN-------------------------- 329
+ SG K + A +F +M G PNA T +
Sbjct: 367 IFSGCSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKN 426
Query: 330 ---------SLIDGFVKVGNMDSALGIYKKMLFHGCP-PDVVTFTSLIEGYCRVGKVNYG 379
+L+D + K G++ SA+ I F G + ++ ++ GY G+ G
Sbjct: 427 LICDAYVATALVDMYGKSGDLQSAIEI-----FWGIKNKSLASWNCMLMGYAMFGRGEEG 481
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR---DLLRQLKRTDIVPQPSIYNHV 436
+ + M + TF+ ++S S +QE DL+R R I+P + +
Sbjct: 482 IAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRS--RYGIIPTIEHCSCM 539
Query: 437 IDGYCKSGNVDEANAIVVEMEEKCKPD 463
+D +SG +DEA + M KPD
Sbjct: 540 VDLLGRSGYLDEAWDFIQTMS--LKPD 564
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 26/238 (10%)
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
+ + R + + Y + + A+ LFDEM K + +N ++ ++ GN + A+
Sbjct: 20 NSDTRVVSASMGFYGRCVSLGFANKLFDEM----PKRDDLAWNEIVMVNLRSGNWEKAVE 75
Query: 347 IYKKMLFHGCPPDVVTFTSLI------EGYCRVGKVN-YGLDLWHEMNTRNISASLHTFS 399
++++M F G T L+ EG+ +++ Y L L E N ++
Sbjct: 76 LFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNS------ 129
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE- 458
LI ++ +L+ +R + +K ++ S +N ++ Y K G VD+A ++ EME
Sbjct: 130 -LIVMYSRNGKLELSRKVFNSMKDRNL----SSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPG 516
KPD T+ L++G+ KG + DAI + +M G P ++ SS L PG
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSI---SSLLQAVAEPG 239
>AT1G05600.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 207/475 (43%), Gaps = 47/475 (9%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVH-HSFWTYNMLLRSLCQKGLHSSAKLLY 137
LTPSL+ +++K+ NP+ K F+ +E+ + H+ Y ++ L + K +
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVI 69
Query: 138 DCMRFDGKLPDSRLLGFLVSSFALVDRLDVS-----------------------KELLAE 174
+ M+ D + ++ +F+ RL+ + +E++ E
Sbjct: 70 ERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKE 129
Query: 175 AQ-----------CNKVQVNAVV--YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
++ C +VN+ + + L+ VL + N+ D A +F+E+ + + +
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDS 189
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGM----RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ +LM G C G ++EA L M G DIV Y LL LC EVD A ++L
Sbjct: 190 YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSK--MKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
++ K +P R Y + +G+ + S ++ L E G P +++++
Sbjct: 250 GKILRKGLKAPK-RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH-EMNTRNISAS 394
+ G + + M G P + + ++ CR GK+ + + + EM + +
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQL-KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
+ ++VLI LC + EA L+++ K+ V Y ++DG C+ G EA+ ++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 454 VEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
EM K P T+ ++I G C R +A++ +M++ P+ + L+
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 170/405 (41%), Gaps = 51/405 (12%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N VY ++ +L K N++ + + + + S F ++ AG +++A
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
+ F C ++++TLL + + E++ A + ++ + + + + ++ C+
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH----GCPP 358
+++ AS +F EM+ G P+ ++ L+ GF G ++ A + M + G
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 359 DVVTFTSLIEGYCRVGKVNYGLDL-----------------------WH----------- 384
D+V + L++ C G+V+ +++ W
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 385 ---EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
E R L ++S + + L + +L E ++L ++ P P IY + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 442 KSGNVDEANAIVVE--MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM-LATGCSPD 498
++G + EA +++ + M+ C P + +LI G C G++ +A+ KM C +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYEGTNS 543
E T + L L + G EA+++ E + L KS++ G +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEM-------LIKSHFPGVET 442
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 11/333 (3%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N+L++ LCQ A ++ M + G PD L+ F L +L+ + LL
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 178 NKVQVNA----VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG--LCS 231
Q + VVY LL L ++DDAI + +++R ++ + G S
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-FSPNV 290
+ ++ + L G P + +Y+ + L ++ ++L + ++SK F P
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL--LAMRSKGFEPTP 333
Query: 291 RSYTTVISGYCKLSKMKEASSLFD-EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
Y + C+ K+KEA S+ + EM + P +N LI G G A+G K
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 350 KMLFH-GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
KM C + T+ +L++G CR G+ + EM ++ + T+ ++I LC
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+R EA L ++ D+VP+ S++ + + C
Sbjct: 454 DRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 11/263 (4%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRL----LGFLVSSFALVDRLDVSKE 170
Y +LL +LC G + + ++L +R K P G SS ++R+ K
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERV---KR 284
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS-TFNVLMGGL 229
LL E Y + + L + KL + + MRS T + + L
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA-MRSKGFEPTPFIYGAKVKAL 343
Query: 230 CSAGDVDEAFKFLNG-MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
C AG + EA +N M C P + YN L+ GLC + A LK++ +
Sbjct: 344 CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA 403
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
N +Y T++ G C+ + EAS + +EM P T++ +I G + A+
Sbjct: 404 NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Query: 349 KKMLFHGCPPDVVTFTSLIEGYC 371
++M+ P+ + +L E C
Sbjct: 464 EEMVSQDMVPESSVWKALAESVC 486
>AT1G05600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1672161-1673675 FORWARD
LENGTH=504
Length = 504
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/475 (22%), Positives = 207/475 (43%), Gaps = 47/475 (9%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVH-HSFWTYNMLLRSLCQKGLHSSAKLLY 137
LTPSL+ +++K+ NP+ K F+ +E+ + H+ Y ++ L + K +
Sbjct: 10 LTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVLEMKYVI 69
Query: 138 DCMRFDGKLPDSRLLGFLVSSFALVDRLDVS-----------------------KELLAE 174
+ M+ D + ++ +F+ RL+ + +E++ E
Sbjct: 70 ERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLLQEMVKE 129
Query: 175 AQ-----------CNKVQVNAVV--YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
++ C +VN+ + + L+ VL + N+ D A +F+E+ + + +
Sbjct: 130 SELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDS 189
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGM----RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+ +LM G C G ++EA L M G DIV Y LL LC EVD A ++L
Sbjct: 190 YRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVDDAIEIL 249
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSK--MKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
++ K +P R Y + +G+ + S ++ L E G P +++++
Sbjct: 250 GKILRKGLKAPK-RCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSAMATDL 308
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH-EMNTRNISAS 394
+ G + + M G P + + ++ CR GK+ + + + EM + +
Sbjct: 309 FEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPT 368
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQL-KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
+ ++VLI LC + EA L+++ K+ V Y ++DG C+ G EA+ ++
Sbjct: 369 VGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVM 428
Query: 454 VEMEEKCK-PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
EM K P T+ ++I G C R +A++ +M++ P+ + L+
Sbjct: 429 EEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/405 (19%), Positives = 170/405 (41%), Gaps = 51/405 (12%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N VY ++ +L K N++ + + + + S F ++ AG +++A
Sbjct: 45 NGSVYATMIDILGKSNRVLEMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLF 104
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
+ F C ++++TLL + + E++ A + ++ + + + + ++ C+
Sbjct: 105 KSLHEFNCVNWSLSFDTLLQEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQ 164
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH----GCPP 358
+++ AS +F EM+ G P+ ++ L+ GF G ++ A + M + G
Sbjct: 165 VNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGE 224
Query: 359 DVVTFTSLIEGYCRVGKVNYGLDL-----------------------WH----------- 384
D+V + L++ C G+V+ +++ W
Sbjct: 225 DIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKR 284
Query: 385 ---EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
E R L ++S + + L + +L E ++L ++ P P IY + C
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALC 344
Query: 442 KSGNVDEANAIVVE--MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM-LATGCSPD 498
++G + EA +++ + M+ C P + +LI G C G++ +A+ KM C +
Sbjct: 345 RAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVAN 404
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYEGTNS 543
E T + L L + G EA+++ E + L KS++ G +
Sbjct: 405 EETYQTLVDGLCRDGQFLEASQVMEEM-------LIKSHFPGVET 442
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 147/333 (44%), Gaps = 11/333 (3%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N+L++ LCQ A ++ M + G PD L+ F L +L+ + LL
Sbjct: 156 NLLMKVLCQVNRSDLASQVFQEMNYQGCYPDRDSYRILMKGFCLEGKLEEATHLLYSMFW 215
Query: 178 NKVQVNA----VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG--LCS 231
Q + VVY LL L ++DDAI + +++R ++ + G S
Sbjct: 216 RISQKGSGEDIVVYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESS 275
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-FSPNV 290
+ ++ + L G P + +Y+ + L ++ ++L + ++SK F P
Sbjct: 276 SEGIERVKRLLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVL--LAMRSKGFEPTP 333
Query: 291 RSYTTVISGYCKLSKMKEASSLFD-EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
Y + C+ K+KEA S+ + EM + P +N LI G G A+G K
Sbjct: 334 FIYGAKVKALCRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLK 393
Query: 350 KMLFH-GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
KM C + T+ +L++G CR G+ + EM ++ + T+ ++I LC
Sbjct: 394 KMSKQVSCVANEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDM 453
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+R EA L ++ D+VP+ S++ + + C
Sbjct: 454 DRRYEAVMWLEEMVSQDMVPESSVWKALAESVC 486
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 108/263 (41%), Gaps = 11/263 (4%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRL----LGFLVSSFALVDRLDVSKE 170
Y +LL +LC G + + ++L +R K P G SS ++R+ K
Sbjct: 228 VYRILLDALCDAGEVDDAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERV---KR 284
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS-TFNVLMGGL 229
LL E Y + + L + KL + + MRS T + + L
Sbjct: 285 LLTETLIRGAIPCLDSYSAMATDLFEEGKLVEGEEVLLA-MRSKGFEPTPFIYGAKVKAL 343
Query: 230 CSAGDVDEAFKFLNG-MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
C AG + EA +N M C P + YN L+ GLC + A LK++ +
Sbjct: 344 CRAGKLKEAVSVINKEMMQGHCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVA 403
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
N +Y T++ G C+ + EAS + +EM P T++ +I G + A+
Sbjct: 404 NEETYQTLVDGLCRDGQFLEASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWL 463
Query: 349 KKMLFHGCPPDVVTFTSLIEGYC 371
++M+ P+ + +L E C
Sbjct: 464 EEMVSQDMVPESSVWKALAESVC 486
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 110/462 (23%), Positives = 212/462 (45%), Gaps = 53/462 (11%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N +L++ GL+ +A LY MR G D +L ++ + + R + + +
Sbjct: 126 WNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFHTQVI 185
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL-MRSHSHLETSTFNVLMGGLCSAGDV 235
++ N V + LL++ K ++ DA LF E+ +R+ ++NV++ G D
Sbjct: 186 QIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRM-----SWNVMIKGFSQEYDC 240
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLL--HGLC-RIKEVDRARDLLKEVG----------- 281
+ A K M+ PD VT+ ++L H C + ++V + L++ G
Sbjct: 241 ESAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVF 300
Query: 282 --------------------LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
+K F + S +I Y K K+K+A LF ++ G
Sbjct: 301 FSVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGI 360
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKM--LFHGC--PPDVVTFTSLIEGYCRVGKVN 377
+ ++NSLI FV G +D AL ++ ++ + H C +VVT+TS+I+G G+ +
Sbjct: 361 E----SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGD 416
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
L+ + +M + A+ T ++S + L R++ + RT + + N ++
Sbjct: 417 DSLEYFRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 438 DGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
+ Y K G + E + + + +K D ++ +I G+ M G A A+ +F +M+++G P
Sbjct: 477 NMYAKCGLLSEGSLVFEAIRDK---DLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHP 533
Query: 498 DEIT-VRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
D I V +LS+C +G+ + I S+ + G ++ +Y
Sbjct: 534 DGIALVAVLSAC-SHAGLVEKGREIFYSMSKRFGLEPQQEHY 574
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 148/365 (40%), Gaps = 19/365 (5%)
Query: 99 KFFQF-TREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
K F++ RE+ WT + S C G + MR G L S
Sbjct: 245 KIFEWMQREEFKPDEVTWTSVLSCHSQC--GKFEDVLKYFHLMRMSGNAVSGEALAVFFS 302
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
A ++ L +++++ + + L+ V K K+ DA LFR++
Sbjct: 303 VCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKG--- 359
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG----CSPDIVTYNTLLHGLCRIK-EVDR 272
++N L+ AG +DEA + + ++VT+ +++ G C ++ D
Sbjct: 360 -IESWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKG-CNVQGRGDD 417
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
+ + +++ SK N + ++S +L + + + R+ N N+L+
Sbjct: 418 SLEYFRQMQF-SKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALV 476
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
+ + K G + +++ + D++++ S+I+GY G L ++ M +
Sbjct: 477 NMYAKCGLLSEGSLVFEAIR----DKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFH 532
Query: 393 ASLHTFSVLISYLCKSNRLQEARDLLRQL-KRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
++S + +++ R++ + KR + PQ Y ++D + G + EA+
Sbjct: 533 PDGIALVAVLSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASE 592
Query: 452 IVVEM 456
IV M
Sbjct: 593 IVKNM 597
>AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4229994-4231178 REVERSE
LENGTH=394
Length = 394
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 136/285 (47%), Gaps = 5/285 (1%)
Query: 145 KLPDSRLLGF---LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLD 201
K P+ GF +++ + V + ++++ E + A+ ++ LL+ V K D
Sbjct: 99 KYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFD 158
Query: 202 DAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTL 260
+F+EL S + +++N L+ GLC G EA ++ + + G PD +T+N L
Sbjct: 159 LVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNIL 218
Query: 261 LHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
LH + + + + ++ ++RSY + G +K +E SLFD++ +
Sbjct: 219 LHESYTKGKFEEGEQIWARM-VEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNE 277
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
KP+ FTF ++I GFV G +D A+ YK++ +GC P F SL+ C+ G +
Sbjct: 278 LKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAY 337
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
+L E+ + + ++ L K ++ EA +++ K D
Sbjct: 338 ELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVELAKTND 382
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 120/292 (41%), Gaps = 36/292 (12%)
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G + A K + M C +++N LL+ K+ D + KE+ K P+V S
Sbjct: 120 GMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVAS 179
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y T+I G C EA +L DE++ G KP+ TFN +L
Sbjct: 180 YNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFN---------------------IL 218
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
H E Y + GK G +W M +N+ + +++ + L N+ +
Sbjct: 219 LH-------------ESYTK-GKFEEGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSE 264
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
E L +LK ++ P + +I G+ G +DEA E+E+ C+P KF F L+
Sbjct: 265 EMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLL 324
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKE 523
C G A + ++ A DE ++ + L+K EA I E
Sbjct: 325 PAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEIVE 376
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 126/279 (45%), Gaps = 9/279 (3%)
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS---YTTV 296
KF ++ +I Y + L K+ + ++L+E ++K+ PN+ +
Sbjct: 57 KFKKACQAEWFRKNIAVYERTVRRLAAAKKFEWVEEILEE---QNKY-PNMSKEGFVARI 112
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH-G 355
I+ Y ++ + A +FDEM K A +FN+L++ V D GI+K++
Sbjct: 113 INLYGRVGMFENAQKVFDEMPERNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLS 172
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PDV ++ +LI+G C G + L E+ + + TF++L+ + +E
Sbjct: 173 IEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGE 232
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGH 474
+ ++ ++ YN + G +E ++ +++ + KPD FTFT +I G
Sbjct: 233 QIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGF 292
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+G+ +AI + ++ GC P + L + K+G
Sbjct: 293 VSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAG 331
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL++ +YN L++ LC KG + A L D + G PD L+ + +
Sbjct: 170 KLSIEPDVASYNTLIKGLCGKGSFTEAVALIDEIENKGLKPDHITFNILLHESYTKGKFE 229
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+++ A V+ + Y+ L L NK ++ + LF +L + + TF ++
Sbjct: 230 EGEQIWARMVEKNVKRDIRSYNARLLGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMI 289
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
G S G +DEA + + GC P +N+LL +C+ +++ A +L KE+ K +
Sbjct: 290 KGFVSEGKLDEAITWYKEIEKNGCRPLKFVFNSLLPAICKAGDLESAYELCKEIFAK-RL 348
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFD 314
+ V+ K SK EA + +
Sbjct: 349 LVDEAVLQEVVDALVKGSKQDEAEEIVE 376
>AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4227975-4229630 REVERSE
LENGTH=551
Length = 551
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 118/240 (49%), Gaps = 8/240 (3%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
++ LLS V KLD+A+ F+EL + T+N ++ LC G +D+ +
Sbjct: 160 FNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEEL 219
Query: 246 RSFGCSPDIVTYNTLLHGLCRIK---EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
G PD++++NTLL R + E DR DL+K L SPN+RSY + + G +
Sbjct: 220 EKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNL----SPNIRSYNSRVRGLTR 275
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
K +A +L D M G P+ T+N+LI + N++ + Y +M G PD VT
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
+ LI C+ G ++ +++ E + + + + ++ L + ++ EA L++ K
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAGKIDEATQLVKNGK 395
Score = 112 bits (281), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 121/249 (48%), Gaps = 2/249 (0%)
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM-RSFGCSPDIVTYNTLLHGL 264
LF E+ + +FN L+ ++ +DEA K + G +PD+VTYNT++ L
Sbjct: 144 LFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKAL 203
Query: 265 CRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPN 324
CR +D + +E+ K+ F P++ S+ T++ + + E ++D M PN
Sbjct: 204 CRKGSMDDILSIFEELE-KNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPN 262
Query: 325 AFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWH 384
++NS + G + AL + M G PDV T+ +LI Y + + ++
Sbjct: 263 IRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYN 322
Query: 385 EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
EM + ++ T+ +LI LCK L A ++ + + ++ +P++Y V++ +G
Sbjct: 323 EMKEKGLTPDTVTYCMLIPLLCKKGDLDRAVEVSEEAIKHKLLSRPNMYKPVVERLMGAG 382
Query: 445 NVDEANAIV 453
+DEA +V
Sbjct: 383 KIDEATQLV 391
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 110/229 (48%), Gaps = 4/229 (1%)
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
+G + A K + M C + ++N LL K++D A KE+ K +P++
Sbjct: 135 SGMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLV 194
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y T+I C+ M + S+F+E++++G +P+ +FN+L++ F + I+ M
Sbjct: 195 TYNTMIKALCRKGSMDDILSIFEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLM 254
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
P++ ++ S + G R K L+L M T IS +HT++ LI+ N L
Sbjct: 255 KSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNL 314
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC 460
+E ++K + P Y +I CK G++D A VE+ E+
Sbjct: 315 EEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGDLDRA----VEVSEEA 359
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEM-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
V+S+ ++S Y K+ EA F E+ ++ G P+ T+N++I + G+MD L I+
Sbjct: 157 VKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIF 216
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
+++ +G PD+++F +L+E + R G +W M ++N+S ++ +++ + L ++
Sbjct: 217 EELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRN 276
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF 467
+ +A +L+ +K I P YN +I Y N++E EM+EK PD T+
Sbjct: 277 KKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTY 336
Query: 468 TILIAGHCMKGRAPDAIVI 486
+LI C KG A+ +
Sbjct: 337 CMLIPLLCKKGDLDRAVEV 355
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 17/322 (5%)
Query: 215 SHLETSTFNVLMGGLCSAGDVD-EAFKFLNGMRSFGCSPDIVTYNTLLHGLC-----RIK 268
S L+ ST +V GG S D + K + F S + ++ + HGL R++
Sbjct: 40 SKLKASTASVGDGGQSSNDAKDSKNSKLTQKVEKFKRSCESESFRQV-HGLYSAFIRRLR 98
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVIS-----GYCKLSKMKEASSLFDEMDRSGTKP 323
E + + + + + KF +++S VI GY +++ A LFDEM +
Sbjct: 99 EAKKFSTIDEVLQYQKKFD-DIKSEDFVIRIMLLYGYSGMAE--HAHKLFDEMPELNCER 155
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFH-GCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
+FN+L+ +V +D A+ +K++ G PD+VT+ ++I+ CR G ++ L +
Sbjct: 156 TVKSFNALLSAYVNSKKLDEAMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSI 215
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
+ E+ L +F+ L+ + E + +K ++ P YN + G +
Sbjct: 216 FEELEKNGFEPDLISFNTLLEEFYRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTR 275
Query: 443 SGNVDEA-NAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ +A N I V E PD T+ LI + + + + + +M G +PD +T
Sbjct: 276 NKKFTDALNLIDVMKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVT 335
Query: 502 VRILSSCLLKSGMPGEAARIKE 523
+L L K G A + E
Sbjct: 336 YCMLIPLLCKKGDLDRAVEVSE 357
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 100/223 (44%), Gaps = 15/223 (6%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
K F+ EKL + TYN ++++LC+KG +++ + +G PD L+
Sbjct: 176 AMKTFKELPEKLGITPDLVTYNTMIKALCRKGSMDDILSIFEELEKNGFEPD------LI 229
Query: 157 SSFALVDRLDVSKELLAEA-------QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRE 209
S L++ +EL E + + N Y++ + L ++ K DA+ L
Sbjct: 230 SFNTLLEEF-YRRELFVEGDRIWDLMKSKNLSPNIRSYNSRVRGLTRNKKFTDALNLIDV 288
Query: 210 LMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE 269
+ + T+N L+ +++E K N M+ G +PD VTY L+ LC+ +
Sbjct: 289 MKTEGISPDVHTYNALITAYRVDNNLEEVMKCYNEMKEKGLTPDTVTYCMLIPLLCKKGD 348
Query: 270 VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
+DRA ++ +E +K K Y V+ K+ EA+ L
Sbjct: 349 LDRAVEVSEE-AIKHKLLSRPNMYKPVVERLMGAGKIDEATQL 390
>AT3G17370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5949006-5949644 REVERSE
LENGTH=212
Length = 212
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 114/215 (53%), Gaps = 14/215 (6%)
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
+F+ + S+ ++T+ +N+++ GLC AG DEA + G PD+ TYN ++
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI---- 56
Query: 266 RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNA 325
R + RA L E+ ++ P+ +Y ++I G CK +K+ +A + +
Sbjct: 57 RFSSLGRAEKLYAEM-IRRGLVPDTITYNSMIHGLCKQNKLAQARKV---------SKSC 106
Query: 326 FTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHE 385
TFN+LI+G+ K + + ++ +M G +V+T+T+LI G+ +VG N LD++ E
Sbjct: 107 STFNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQE 166
Query: 386 MNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
M + + +S TF ++ LC L++A +L Q
Sbjct: 167 MVSNGVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
MR D YN ++HGLC+ + D A ++ + L S P+V++Y +I + S
Sbjct: 5 MRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNL-LISGLQPDVQTYNMMI----RFS 59
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+ A L+ EM R G P+ T+NS+I G K + A + K C TF
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKS-----CS----TFN 110
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
+LI GYC+ +V G++L+ EM R I A++ T++ LI + A D+ +++
Sbjct: 111 TLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSN 170
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
+ + ++ C + +A A++++
Sbjct: 171 GVYSSSITFRDILPQLCSRKELRKAVAMLLQ 201
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 86/174 (49%), Gaps = 13/174 (7%)
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+S + Y +I G CK K EA ++F + SG +P+ T+N +I + ++
Sbjct: 7 ESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMI----RFSSLG 62
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A +Y +M+ G PD +T+ S+I G C+ K+ R +S S TF+ LI
Sbjct: 63 RAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKL---------AQARKVSKSCSTFNTLI 113
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+ CK+ R+++ +L ++ R IV Y +I G+ + G+ + A I EM
Sbjct: 114 NGYCKATRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEM 167
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
++K M D + +I G C+ GK + +++ + + + T++++I +
Sbjct: 1 MFKVMRESNMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRF-- 58
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFT 466
+ L A L ++ R +VP YN +I G CK + +A + + C T
Sbjct: 59 --SSLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKV----SKSCS----T 108
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRIL 505
F LI G+C R D + +F +M G + IT L
Sbjct: 109 FNTLINGYCKATRVKDGMNLFCEMYRRGIVANVITYTTL 147
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 81/200 (40%), Gaps = 23/200 (11%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV--S 157
F+ RE N+ YN+++ LC+ G A ++ + G PD + ++ S
Sbjct: 1 MFKVMRES-NMDMDTAGYNIIIHGLCKAGKFDEAGNIFTNLLISGLQPDVQTYNMMIRFS 59
Query: 158 SFALVDRLD---VSKELLAE-----------------AQCNKVQVNAVVYDNLLSVLVKH 197
S ++L + + L+ + AQ KV + ++ L++ K
Sbjct: 60 SLGRAEKLYAEMIRRGLVPDTITYNSMIHGLCKQNKLAQARKVSKSCSTFNTLINGYCKA 119
Query: 198 NKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTY 257
++ D + LF E+ R T+ L+ G GD + A M S G +T+
Sbjct: 120 TRVKDGMNLFCEMYRRGIVANVITYTTLIHGFRQVGDFNTALDIFQEMVSNGVYSSSITF 179
Query: 258 NTLLHGLCRIKEVDRARDLL 277
+L LC KE+ +A +L
Sbjct: 180 RDILPQLCSRKELRKAVAML 199
>AT1G73400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27598106-27599812 FORWARD
LENGTH=568
Length = 568
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 151/315 (47%), Gaps = 9/315 (2%)
Query: 212 RSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF--GCSPDIVTYNTLLHGLCRIKE 269
+ H E +N ++ L S ++ F+ + M + + +V + LL L + E
Sbjct: 152 QEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCE 211
Query: 270 --VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
+ + K ++ K P + ++ ++ CK +KE +L M R KP+A T
Sbjct: 212 RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM-RHRVKPDANT 270
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
FN L G+ +V + A+ + ++M+ G P+ T+ + I+ +C+ G V+ DL+ M
Sbjct: 271 FNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMI 330
Query: 388 TRNISASL---HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
T+ + S TF+++I L K+++ +E +L+ ++ T +P S Y VI+G C +
Sbjct: 331 TKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAE 390
Query: 445 NVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
VDEA + EM K PD T+ + C + +A+ ++ +M+ + C+P T
Sbjct: 391 KVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYN 450
Query: 504 ILSSCLLKSGMPGEA 518
+L S + P A
Sbjct: 451 MLISMFFEMDDPDGA 465
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 119/283 (42%), Gaps = 3/283 (1%)
Query: 179 KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEA 238
K Q ++ LL L K + + L R MR + +TFNVL G C D +A
Sbjct: 229 KTQPEINAFNMLLDALCKCGLVKEGEALLRR-MRHRVKPDANTFNVLFFGWCRVRDPKKA 287
Query: 239 FKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF--SPNVRSYTTV 296
K L M G P+ TY + C+ VD A DL + K +P +++ +
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I K K +E L M +G P+ T+ +I+G +D A +M G
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
PPD+VT+ + C K + L L+ M + S+ T+++LIS + + A +
Sbjct: 408 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
++ + D V Y +I+G EA ++ E+ K
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNK 510
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 141/343 (41%), Gaps = 40/343 (11%)
Query: 83 LVLEVVKRLNNPILGF--KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCM 140
++LE++++ L KF + R ++ +NMLL +LC+ GL + L M
Sbjct: 201 VLLEILRKYCERYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRM 260
Query: 141 RFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKL 200
R K PD+ L + V D K
Sbjct: 261 RHRVK-PDANTFNVLFFGWCRVR--DPKK------------------------------- 286
Query: 201 DDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTL 260
A+ L E++ + E T+ + C AG VDEA + M + G + T T
Sbjct: 287 --AMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTF 344
Query: 261 LHGLCRIKEVDRARDLLKEVG--LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+ + + D+A + + +G + + P+V +Y VI G C K+ EA DEM
Sbjct: 345 ALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSN 404
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G P+ T+N + + D AL +Y +M+ C P V T+ LI + + +
Sbjct: 405 KGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDG 464
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
+ W EM+ R+ + T+ +I+ L +R +EA LL ++
Sbjct: 465 AFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEV 507
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 422 KRTDIVPQPSI--YNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGR 479
KR + QP I +N ++D CK G V E A++ M + KPD TF +L G C
Sbjct: 224 KRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRD 283
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
A+ + +M+ G P+ T ++GM EAA
Sbjct: 284 PKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAA 323
>AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19704600-19706417 REVERSE
LENGTH=499
Length = 499
Score = 110 bits (276), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 139/299 (46%), Gaps = 10/299 (3%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS--TFNVLMGGLCSAGDVDEAFKFLN 243
VY +L+SV K LD A E M+S S + TF VL+ C G D +
Sbjct: 181 VYTSLISVYGKSELLDKAFSTL-EYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVL 239
Query: 244 GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKL 303
M G VTYNT++ G + + +L ++ P+V + ++I Y
Sbjct: 240 EMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNG 299
Query: 304 SKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG---NMDSALGIYKKMLFHGCPPDV 360
M++ S + G +P+ TFN LI F K G M S + +K F
Sbjct: 300 RNMRKMESWYSRFQLMGVQPDITTFNILILSFGKAGMYKKMCSVMDFMEKRFFS---LTT 356
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
VT+ +IE + + G++ D++ +M + + + T+ L++ K+ + + +LRQ
Sbjct: 357 VTYNIVIETFGKAGRIEKMDDVFRKMKYQGVKPNSITYCSLVNAYSKAGLVVKIDSVLRQ 416
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKG 478
+ +D+V +N +I+ Y ++G++ + ++MEE KCKPDK TF +I + G
Sbjct: 417 IVNSDVVLDTPFFNCIINAYGQAGDLATMKELYIQMEERKCKPDKITFATMIKTYTAHG 475
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 122/284 (42%), Gaps = 8/284 (2%)
Query: 147 PDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICL 206
PD L+S + R D+ K ++ E V + V Y+ ++ K ++ +
Sbjct: 213 PDVFTFTVLISCCCKLGRFDLVKSIVLEMSYLGVGCSTVTYNTIIDGYGKAGMFEEMESV 272
Query: 207 FRELMRSHSHL-ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
+++ L + T N ++G + ++ + + + + G PDI T+N L+
Sbjct: 273 LADMIEDGDSLPDVCTLNSIIGSYGNGRNMRKMESWYSRFQLMGVQPDITTFNILILSFG 332
Query: 266 RI---KEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
+ K++ D ++ K FS +Y VI + K ++++ +F +M G K
Sbjct: 333 KAGMYKKMCSVMDFME----KRFFSLTTVTYNIVIETFGKAGRIEKMDDVFRKMKYQGVK 388
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
PN+ T+ SL++ + K G + + ++++ D F +I Y + G + +L
Sbjct: 389 PNSITYCSLVNAYSKAGLVVKIDSVLRQIVNSDVVLDTPFFNCIINAYGQAGDLATMKEL 448
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
+ +M R TF+ +I ++L +Q+ +DI
Sbjct: 449 YIQMEERKCKPDKITFATMIKTYTAHGIFDAVQELEKQMISSDI 492
>AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4857241-4858959 FORWARD
LENGTH=572
Length = 572
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 175/390 (44%), Gaps = 41/390 (10%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMR-SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
Y +++S+L K K D A L E+ + S S + + T +++ C+ DV +A +
Sbjct: 164 YHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAY 223
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK-LS 304
+ F I + +LL LCR K V A L+ K K+ + +S+ V++G+C +
Sbjct: 224 KRFKLEMGIDDFQSLLSALCRYKNVSDAGHLI--FCNKDKYPFDAKSFNIVLNGWCNVIG 281
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFT 364
+EA ++ EM G K + +++S+I + K G+++ L ++ +M PD +
Sbjct: 282 SPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYN 341
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNT-RNISASLHTFSVLISYLCKSNRLQEAR-------- 415
+++ + V+ +L M + I ++ T++ LI LCK+ + +EA+
Sbjct: 342 AVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLE 401
Query: 416 ------------------------DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
+LL ++++ P Y +I C+ + D
Sbjct: 402 KGLFPTIRTYHAFMRILRTGEEVFELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLL 461
Query: 452 IVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
+ EM+EK PD ++ ++I G + G+ +A + +M G P+E ++ S
Sbjct: 462 LWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKDKGMRPNENVEDMIQSWF- 520
Query: 511 KSGMPGEAARIKESLHE-NQGDSLKKSYYE 539
SG RI +S E N+G +KKS E
Sbjct: 521 -SGKQYAEQRITDSKGEVNKGAIVKKSERE 549
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 89/382 (23%), Positives = 171/382 (44%), Gaps = 9/382 (2%)
Query: 82 SLVLEVVKRLNNPI-LGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCM 140
LV+E++ R+ N F FF + ++ S Y+ ++ L + +A L D M
Sbjct: 128 ELVVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEM 187
Query: 141 R-FDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
R F L +S+ L ++ + V + + + K+++ + +LLS L ++
Sbjct: 188 RKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKN 247
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSA-GDVDEAFKFLNGMRSFGCSPDIVTYN 258
+ DA L + + +FN+++ G C+ G EA + M + G D+V+Y+
Sbjct: 248 VSDAGHLIF-CNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYS 306
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+++ + +++ L + K P+ + Y V+ K S + EA +L M+
Sbjct: 307 SMISCYSKGGSLNKVLKLFDRMK-KECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEE 365
Query: 319 S-GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
G +PN T+NSLI K + A ++ +ML G P + T+ + + R G+
Sbjct: 366 EKGIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR-ILRTGEEV 424
Query: 378 YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVI 437
+ +L +M ++ T+ +LI LC+ L ++K + P S Y +I
Sbjct: 425 F--ELLAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMI 482
Query: 438 DGYCKSGNVDEANAIVVEMEEK 459
G +G ++EA EM++K
Sbjct: 483 HGLFLNGKIEEAYGYYKEMKDK 504
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 156/377 (41%), Gaps = 42/377 (11%)
Query: 139 CMRFDGKLPDSRLLGFLVSSFALVDRLDV------SKELLAEAQCNKVQVNAVVYDNLLS 192
C F + DS +GF S+ D D+ S EL++E +S
Sbjct: 54 CSMFSTSIADSEQVGFTRSNIEKDDESDIDLGCSISDELVSEDVGK------------IS 101
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA--GDVDEAFKF-LNGMRSFG 249
LVK D +EL + N L+ + S D + AF F + + G
Sbjct: 102 KLVKDCGSDR-----KELRNKLEECDVKPSNELVVEILSRVRNDWETAFTFFVWAGKQQG 156
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP---NVRSYTTVISGYCKLSKM 306
+ Y++++ L ++++ D A L+ E+ KFSP N ++ +I YC + +
Sbjct: 157 YVRSVREYHSMISILGKMRKFDTAWTLIDEM---RKFSPSLVNSQTLLIMIRKYCAVHDV 213
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF---HGCPPDVVTF 363
+A + F R + F SL+ + N+ A ++F P D +F
Sbjct: 214 GKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDA----GHLIFCNKDKYPFDAKSF 269
Query: 364 TSLIEGYCRV-GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK 422
++ G+C V G +W EM + + ++S +IS K L + L ++K
Sbjct: 270 NIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMK 329
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKPDKFTFTILIAGHCMKGRA 480
+ I P +YN V+ K+ V EA ++ MEE+ +P+ T+ LI C +
Sbjct: 330 KECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPLCKARKT 389
Query: 481 PDAIVIFYKMLATGCSP 497
+A +F +ML G P
Sbjct: 390 EEAKQVFDEMLEKGLFP 406
>AT1G79490.1 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:29900617-29903127 FORWARD
LENGTH=836
Length = 836
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 137/297 (46%), Gaps = 5/297 (1%)
Query: 206 LFRELMR---SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH 262
LF E+++ SH L + +N ++ L A ++ AF + GC D TYN L+
Sbjct: 227 LFEEMVQDSSSHGDLSFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMM 286
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
+A ++ + + K+ + +Y +I K ++ A LF +M +
Sbjct: 287 LFLNKGLPYKAFEIYESME-KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLR 345
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P+ F+SL+D K G +D+++ +Y +M G P F SLI+ Y + GK++ L L
Sbjct: 346 PSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRL 405
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
W EM + ++++I KS +L+ A + + +++ +P PS Y+ +++ +
Sbjct: 406 WDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAG 465
Query: 443 SGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
SG VD A I M +P ++ L+ K A I +M A G S D
Sbjct: 466 SGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVD 522
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/357 (22%), Positives = 158/357 (44%), Gaps = 27/357 (7%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y+ ++ L K KL+ A C F++ S ++T T+N LM + G +AF+ M
Sbjct: 246 YNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESME 305
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
D TY ++ L + +D A L +++ + K P+ +++++ K ++
Sbjct: 306 KTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMK-ERKLRPSFSVFSSLVDSMGKAGRL 364
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+ ++ EM G +P+A F SLID + K G +D+AL ++ +M G P+ +T +
Sbjct: 365 DTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMI 424
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
IE + + GK+ + ++ +M + T+S L+ S ++ A + + +
Sbjct: 425 IESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGL 484
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
P S Y ++ VD A I++EM+ G+ + A D ++I
Sbjct: 485 RPGLSSYISLLTLLANKRLVDVAGKILLEMKA-------------MGYSVDVCASDVLMI 531
Query: 487 FYK-------------MLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQG 530
+ K M ++G + +R L +K+G+ A + E+L + G
Sbjct: 532 YIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLLETLVHSAG 588
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 133/269 (49%), Gaps = 3/269 (1%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
++ A ++L+V+ +AQ + +++ Y+NL+ + + A ++ + ++
Sbjct: 249 VIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESMEKTD 308
Query: 215 SHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
S L+ ST+ +++ L +G +D AFK M+ P +++L+ + + +D +
Sbjct: 309 SLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKAGRLDTSM 368
Query: 275 DLLKEV-GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
+ E+ G + P+ + ++I Y K K+ A L+DEM +SG +PN + +I+
Sbjct: 369 KVYMEMQGFGHR--PSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIE 426
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
K G ++ A+ ++K M G P T++ L+E + G+V+ + +++ M +
Sbjct: 427 SHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRP 486
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLK 422
L ++ L++ L + A +L ++K
Sbjct: 487 GLSSYISLLTLLANKRLVDVAGKILLEMK 515
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 141/339 (41%), Gaps = 39/339 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ KGL A +Y+ M L D ++ S A RLD + +L +
Sbjct: 280 TYNNLMMLFLNKGLPYKAFEIYESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQM 339
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST-FNVLMGGLCSAGD 234
+ K++ + V+ +L+ + K +LD ++ ++ E M+ H ++T F L+ AG
Sbjct: 340 KERKLRPSFSVFSSLVDSMGKAGRLDTSMKVYME-MQGFGHRPSATMFVSLIDSYAKAGK 398
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+D A + + M+ G F PN YT
Sbjct: 399 LDTALRLWDEMKKSG------------------------------------FRPNFGLYT 422
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I + K K++ A ++F +M+++G P T++ L++ G +DSA+ IY M
Sbjct: 423 MIIESHAKSGKLEVAMTVFKDMEKAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNA 482
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
G P + ++ SL+ V+ + EM S + VL+ Y+ K + A
Sbjct: 483 GLRPGLSSYISLLTLLANKRLVDVAGKILLEMKAMGYSVDVCASDVLMIYI-KDASVDLA 541
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
LR + + I I + + K+G D A ++
Sbjct: 542 LKWLRFMGSSGIKTNNFIIRQLFESCMKNGLYDSARPLL 580
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 132/276 (47%), Gaps = 3/276 (1%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
FK FQ +E+ + SF ++ L+ S+ + G ++ +Y M+ G P + + L+
Sbjct: 332 AFKLFQQMKER-KLRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVSLI 390
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
S+A +LD + L E + + + N +Y ++ K KL+ A+ +F+++ ++
Sbjct: 391 DSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMTVFKDMEKAGFL 450
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
ST++ L+ +G VD A K N M + G P + +Y +LL L + VD A +
Sbjct: 451 PTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSYISLLTLLANKRLVDVAGKI 510
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
L E+ +S +V + + V+ Y K + + A M SG K N F L + +
Sbjct: 511 LLEMKAMG-YSVDVCA-SDVLMIYIKDASVDLALKWLRFMGSSGIKTNNFIIRQLFESCM 568
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
K G DSA + + ++ D+V +TS++ R
Sbjct: 569 KNGLYDSARPLLETLVHSAGKVDLVLYTSILAHLVR 604
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 4/236 (1%)
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
+KEVD A L + + + P+ Y + G + SLF+EM + +
Sbjct: 182 VKEVDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDL 241
Query: 327 TFNS---LIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
+FN+ +I K ++ A +KK GC D T+ +L+ + G +++
Sbjct: 242 SFNAYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIY 301
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
M + T+ ++I L KS RL A L +Q+K + P S+++ ++D K+
Sbjct: 302 ESMEKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFSSLVDSMGKA 361
Query: 444 GNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
G +D + + +EM+ +P F LI + G+ A+ ++ +M +G P+
Sbjct: 362 GRLDTSMKVYMEMQGFGHRPSATMFVSLIDSYAKAGKLDTALRLWDEMKKSGFRPN 417
>AT1G02420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:493683-495158 FORWARD
LENGTH=491
Length = 491
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 159/359 (44%), Gaps = 52/359 (14%)
Query: 72 LSYFGKHLTPSLVLEVVKRLN----NPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQ- 126
LS G HL+ L+ V+KR+ NPI +F+++ +HS ++ + +L L +
Sbjct: 62 LSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRN 121
Query: 127 KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA-------LVDRLDVSKELLAEAQCNK 179
+ +LL + R D L R + ++ A V+ K L+ +
Sbjct: 122 RKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDF---- 177
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL---------- 229
+ ++ LL L + + DA ++ L + + TFN+L+ G
Sbjct: 178 --FDTACFNALLRTLCQEKSMTDARNVYHSL-KHQFQPDLQTFNILLSGWKSSEEAEAFF 234
Query: 230 ----------------------CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI 267
C ++++A+K ++ MR +PD++TY T++ GL I
Sbjct: 235 EEMKGKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLI 294
Query: 268 KEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
+ D+AR++LKE+ + P+V +Y I +C ++ +A L DEM + G PNA T
Sbjct: 295 GQPDKAREVLKEMKEYGCY-PDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATT 353
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
+N ++ + +Y +ML + C P+ + LI+ + R KV+ + LW +M
Sbjct: 354 YNLFFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDM 412
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 16/278 (5%)
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
E +++ + +R F S + +T+L+ L R ++ D+ +LL E K + + R+ V
Sbjct: 93 EFYRYASAIRGFYHSS--FSLDTMLYILGRNRKFDQIWELLIETKRKDRSLISPRTMQVV 150
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFT---FNSLIDGFVKVGNMDSALGIYKKMLF 353
+ KL +++ F + R P+ F FN+L+ + +M A +Y L
Sbjct: 151 LGRVAKLCSVRQTVESFWKFKR--LVPDFFDTACFNALLRTLCQEKSMTDARNVYHS-LK 207
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
H PD+ TF L+ G+ + EM + + + T++ LI CK +++
Sbjct: 208 HQFQPDLQTFNILLSGWKSSEEAEAFF---EEMKGKGLKPDVVTYNSLIDVYCKDREIEK 264
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIA 472
A L+ +++ + P Y VI G G D+A ++ EM+E C PD + I
Sbjct: 265 AYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIR 324
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEIT----VRILS 506
C+ R DA + +M+ G SP+ T R+LS
Sbjct: 325 NFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 1/216 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN L+ C+ A L D MR + + PD ++ L+ + D ++E+L E
Sbjct: 248 TYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKAREVLKEM 307
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + Y+ + +L DA L E+++ +T+N+ L A D+
Sbjct: 308 KEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 367
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+++ M C P+ + L+ R ++VD A L +++ +K F
Sbjct: 368 GRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG-FGSYSLVSDV 426
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSL 331
++ C L+K++EA EM G +P+ +F +
Sbjct: 427 LLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRI 462
>AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21823919 REVERSE
LENGTH=590
Length = 590
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 169/371 (45%), Gaps = 13/371 (3%)
Query: 111 HHSFWTYN-----MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ ++W ++ ML+ + + G + A+ + + G P+ L+ S+ +
Sbjct: 138 YQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKC 197
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM---RSHSHLETSTF 222
+ ++ + Q + + +A+ Y +L V+ +K +A +F L+ +S + +
Sbjct: 198 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 257
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
++++ AG+ ++A K + M G VTYN+L+ KEV + D ++
Sbjct: 258 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---- 313
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+S P+V SY +I Y + + +EA S+F+EM +G +P +N L+D F G ++
Sbjct: 314 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 373
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A ++K M PD+ ++T+++ Y + + + ++ T+ LI
Sbjct: 374 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 433
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCK 461
K+N +++ ++ +++ + I +I ++D + N A EME
Sbjct: 434 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 493
Query: 462 PDKFTFTILIA 472
PD+ +L++
Sbjct: 494 PDQKAKNVLLS 504
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 139/305 (45%), Gaps = 7/305 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGK---LPDSRLLGFLVSSFALVDRLDVSKELL 172
TY ++L++ + A+ +++ + + K PD ++ ++ + + ++++
Sbjct: 218 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 277
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ V + V Y++L+S + ++ ++ ++ RS + ++ +L+ A
Sbjct: 278 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 334
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
+EA M G P YN LL V++A+ + K + + + P++ S
Sbjct: 335 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWS 393
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
YTT++S Y S M+ A F + G +PN T+ +LI G+ K +++ + +Y+KM
Sbjct: 394 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 453
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G + T++++ R L + EM + + +VL+S + L+
Sbjct: 454 LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 513
Query: 413 EARDL 417
EA++L
Sbjct: 514 EAKEL 518
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/242 (19%), Positives = 108/242 (44%), Gaps = 9/242 (3%)
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
+ +I+ Y KL A + + + G+ PN ++ +L++ + + G ++A I+++M
Sbjct: 149 FLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQ 208
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM---NTRNISASLHTFSVLISYLCKSN 409
G P +T+ +++ + K +++ + + + ++I K+
Sbjct: 209 SSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAG 268
Query: 410 RLQEARDLLRQLKRTDIVPQPSI-YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF 467
++AR + + VPQ ++ YN ++ + E + I +M+ +PD ++
Sbjct: 269 NYEKARKVFSSMVGKG-VPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSY 324
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+LI + R +A+ +F +ML G P IL SGM +A + +S+
Sbjct: 325 ALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRR 384
Query: 528 NQ 529
++
Sbjct: 385 DR 386
>AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21821495-21824233 REVERSE
LENGTH=583
Length = 583
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/371 (20%), Positives = 169/371 (45%), Gaps = 13/371 (3%)
Query: 111 HHSFWTYN-----MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
+ ++W ++ ML+ + + G + A+ + + G P+ L+ S+ +
Sbjct: 131 YQNWWNFSEIDFLMLITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKC 190
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELM---RSHSHLETSTF 222
+ ++ + Q + + +A+ Y +L V+ +K +A +F L+ +S + +
Sbjct: 191 NNAEAIFRRMQSSGPEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMY 250
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
++++ AG+ ++A K + M G VTYN+L+ KEV + D ++
Sbjct: 251 HMMIYMYKKAGNYEKARKVFSSMVGKGVPQSTVTYNSLMSFETSYKEVSKIYDQMQ---- 306
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+S P+V SY +I Y + + +EA S+F+EM +G +P +N L+D F G ++
Sbjct: 307 RSDIQPDVVSYALLIKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVE 366
Query: 343 SALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
A ++K M PD+ ++T+++ Y + + + ++ T+ LI
Sbjct: 367 QAKTVFKSMRRDRIFPDLWSYTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLI 426
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCK 461
K+N +++ ++ +++ + I +I ++D + N A EME
Sbjct: 427 KGYAKANDVEKMMEVYEKMRLSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVP 486
Query: 462 PDKFTFTILIA 472
PD+ +L++
Sbjct: 487 PDQKAKNVLLS 497
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 139/305 (45%), Gaps = 7/305 (2%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGK---LPDSRLLGFLVSSFALVDRLDVSKELL 172
TY ++L++ + A+ +++ + + K PD ++ ++ + + ++++
Sbjct: 211 TYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYEKARKVF 270
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ V + V Y++L+S + ++ ++ ++ RS + ++ +L+ A
Sbjct: 271 SSMVGKGVPQSTVTYNSLMSFETSYKEVSK---IYDQMQRSDIQPDVVSYALLIKAYGRA 327
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
+EA M G P YN LL V++A+ + K + + + P++ S
Sbjct: 328 RREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSM-RRDRIFPDLWS 386
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
YTT++S Y S M+ A F + G +PN T+ +LI G+ K +++ + +Y+KM
Sbjct: 387 YTTMLSAYVNASDMEGAEKFFKRIKVDGFEPNIVTYGTLIKGYAKANDVEKMMEVYEKMR 446
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
G + T++++ R L + EM + + +VL+S + L+
Sbjct: 447 LSGIKANQTILTTIMDASGRCKNFGSALGWYKEMESCGVPPDQKAKNVLLSLASTQDELE 506
Query: 413 EARDL 417
EA++L
Sbjct: 507 EAKEL 511
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/239 (19%), Positives = 107/239 (44%), Gaps = 9/239 (3%)
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+ Y KL A + + + G+ PN ++ +L++ + + G ++A I+++M G
Sbjct: 145 LITAYGKLGNFNGAERVLSVLSKMGSTPNVISYTALMESYGRGGKCNNAEAIFRRMQSSG 204
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM---NTRNISASLHTFSVLISYLCKSNRLQ 412
P +T+ +++ + K +++ + + + ++I K+ +
Sbjct: 205 PEPSAITYQIILKTFVEGDKFKEAEEVFETLLDEKKSPLKPDQKMYHMMIYMYKKAGNYE 264
Query: 413 EARDLLRQLKRTDIVPQPSI-YNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+AR + + VPQ ++ YN ++ + E + I +M+ +PD ++ +L
Sbjct: 265 KARKVFSSMVGKG-VPQSTVTYNSLM---SFETSYKEVSKIYDQMQRSDIQPDVVSYALL 320
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
I + R +A+ +F +ML G P IL SGM +A + +S+ ++
Sbjct: 321 IKAYGRARREEEALSVFEEMLDAGVRPTHKAYNILLDAFAISGMVEQAKTVFKSMRRDR 379
>AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9605650-9609625 FORWARD
LENGTH=1038
Length = 1038
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 179/391 (45%), Gaps = 15/391 (3%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKL--NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMR 141
+L + RLN LG K F ++ + VH Y +R C++G+ + A+ L M
Sbjct: 508 MLNLYTRLN---LGEKAKGFIKQIMVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMG 564
Query: 142 FDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLD 201
+ ++ D+R + L S +V++ D EA N Q++ + +L++ +K L+
Sbjct: 565 REARVKDNRFVQTLAESMHIVNKHDKH-----EAVLNVSQLDVMALGLMLNLRLKEGNLN 619
Query: 202 DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
+ + + ++ L +S N ++ GDV +A + + G + T TL+
Sbjct: 620 ETKAILNLMFKTD--LGSSAVNRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLI 677
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
R ++ A+ L G +SK +P ++I Y + +++A LF E G
Sbjct: 678 AVYGRQHKLKEAKRLYLAAG-ESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGC 735
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
P A T + L++ G A I + L D V + +LI+ GK+ +
Sbjct: 736 DPGAVTISILVNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASE 795
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
++ M+T + S+ T++ +IS + +L +A ++ +R+ + IY ++I Y
Sbjct: 796 IYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYG 855
Query: 442 KSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
K G + EA ++ EM++K KP ++ +++
Sbjct: 856 KGGKMSEALSLFSEMQKKGIKPGTPSYNMMV 886
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/355 (23%), Positives = 161/355 (45%), Gaps = 9/355 (2%)
Query: 155 LVSSFALVDRLDVSK-ELLAEAQCN-KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR 212
++SSF V DVSK E++A+ +++ L++V + +KL +A L+
Sbjct: 641 VISSF--VREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE 698
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDR 272
S + + S ++ G +++A+ GC P VT + L++ L + R
Sbjct: 699 SKTPGK-SVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTN-RGKHR 756
Query: 273 ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
+ + L+ + Y T+I + K++ AS +++ M SG + T+N++I
Sbjct: 757 EAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMI 816
Query: 333 DGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS 392
+ + +D A+ I+ G D +T++I Y + GK++ L L+ EM + I
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIK 876
Query: 393 ASLHTFSVLISYLCKSNRL-QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
++++++ +C ++RL E +LL+ ++R S Y +I Y +S EA
Sbjct: 877 PGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEK 935
Query: 452 IVVEMEEKCKPDKFTFTILIAGHCMK-GRAPDAIVIFYKMLATGCSPDEITVRIL 505
+ ++EK P + + +K G +A + KM G SPD R +
Sbjct: 936 TITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTI 990
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 167/383 (43%), Gaps = 5/383 (1%)
Query: 118 NMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQC 177
N ++ S ++G S A+++ D + G + + L++ + +L +K L A
Sbjct: 639 NRVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKLKEAKRLYLAAGE 698
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
+K +V+ +++ V+ L+DA LF E T ++L+ L + G E
Sbjct: 699 SKTPGKSVI-RSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISILVNALTNRGKHRE 757
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVI 297
A D V YNTL+ + ++ A ++ + + S ++++Y T+I
Sbjct: 758 AEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH-TSGVPCSIQTYNTMI 816
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
S Y + ++ +A +F RSG + + ++I + K G M AL ++ +M G
Sbjct: 817 SVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIK 876
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLD-LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P ++ +++ C ++++ +D L M L T+ LI +S++ EA
Sbjct: 877 PGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEK 935
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHC 475
+ +K I S ++ ++ K+G ++EA +M E PD ++ G+
Sbjct: 936 TITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEAGISPDSACKRTILKGYM 995
Query: 476 MKGRAPDAIVIFYKMLATGCSPD 498
G A I+ + KM+ + D
Sbjct: 996 TCGDAEKGILFYEKMIRSSVEDD 1018
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 143/364 (39%), Gaps = 36/364 (9%)
Query: 100 FFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSF 159
FF + + +L+ S Y ++LR Q G A+ + M G PD+ G ++ ++
Sbjct: 174 FFSWMKLQLSYRPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTY 233
Query: 160 ALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET 219
A R Q ++ ++ VY+ +LS L K + I L+ E++
Sbjct: 234 ARWGRHSAMLTFYKAVQERRILLSTSVYNFMLSSLQKKSFHGKVIDLWLEMVEEGVPPNE 293
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
T+ +++ G +EA K M+S G P+ VTY
Sbjct: 294 FTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEVTY---------------------- 331
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
++VIS K ++A L+++M G P+ +T +++ + K
Sbjct: 332 --------------SSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTE 377
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
N AL ++ M + P D V +I Y ++G + ++ E N+ A T+
Sbjct: 378 NYPKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYL 437
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+ S + +A D++ +K DI Y ++ Y K NVD A + +
Sbjct: 438 AMSQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKT 497
Query: 460 CKPD 463
PD
Sbjct: 498 GLPD 501
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 2/216 (0%)
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
YN +L L + + DL E+ ++ PN +YT V+S Y K +EA F EM
Sbjct: 261 YNFMLSSLQKKSFHGKVIDLWLEM-VEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEM 319
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
G P T++S+I VK G+ + A+G+Y+ M G P T +++ Y +
Sbjct: 320 KSLGFVPEEVTYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENY 379
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
L L+ +M I A ++I K +A+ + + +R +++ Y +
Sbjct: 380 PKALSLFADMERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAM 439
Query: 437 IDGYCKSGNVDEANAIVVEMEEKCKP-DKFTFTILI 471
+ SGNV +A ++ M+ + P +F + +++
Sbjct: 440 SQVHLNSGNVVKALDVIEMMKTRDIPLSRFAYIVML 475
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 120/272 (44%), Gaps = 3/272 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAK-LLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
T ++L+ +L +G H A+ + C+ + +L D+ L+ + +L + E+
Sbjct: 741 TISILVNALTNRGKHREAEHISRTCLEKNIEL-DTVGYNTLIKAMLEAGKLQCASEIYER 799
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ V + Y+ ++SV + +LD AI +F RS +L+ + ++ G
Sbjct: 800 MHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNARRSGLYLDEKIYTNMIMHYGKGGK 859
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+ EA + M+ G P +YN ++ +C + D L + ++ ++ +Y
Sbjct: 860 MSEALSLFSEMQKKGIKPGTPSYNMMVK-ICATSRLHHEVDELLQAMERNGRCTDLSTYL 918
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+I Y + S+ EA + G + F+SL+ VK G M+ A Y KM
Sbjct: 919 TLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHFSSLLSALVKAGMMEEAERTYCKMSEA 978
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
G PD ++++GY G G+ + +M
Sbjct: 979 GISPDSACKRTILKGYMTCGDAEKGILFYEKM 1010
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 122/266 (45%), Gaps = 15/266 (5%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN L++++ + G A +Y+ M G + ++S + +LD + E+ + A+
Sbjct: 777 YNTLIKAMLEAGKLQCASEIYERMHTSGVPCSIQTYNTMISVYGRGLQLDKAIEIFSNAR 836
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG--- 233
+ + ++ +Y N++ K K+ +A+ LF E+ + T ++N +M +C+
Sbjct: 837 RSGLYLDEKIYTNMIMHYGKGGKMSEALSLFSEMQKKGIKPGTPSYN-MMVKICATSRLH 895
Query: 234 -DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC---RIKEVDRARDLLKEVGLKSKFSPN 289
+VDE L M G D+ TY TL+ + E ++ L+KE G+ S
Sbjct: 896 HEVDE---LLQAMERNGRCTDLSTYLTLIQVYAESSQFAEAEKTITLVKEKGIPLSHSHF 952
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
+ ++ K M+EA + +M +G P++ +++ G++ G+ + + Y+
Sbjct: 953 SSLLSALV----KAGMMEEAERTYCKMSEAGISPDSACKRTILKGYMTCGDAEKGILFYE 1008
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGK 375
KM+ D + + + Y VGK
Sbjct: 1009 KMIRSSVEDDRFVSSVVEDLYKAVGK 1034
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/476 (19%), Positives = 182/476 (38%), Gaps = 69/476 (14%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY+ ++ + G A LY+ MR G +P + ++S + + + L A+
Sbjct: 330 TYSSVISLSVKAGDWEKAIGLYEDMRSQGIVPSNYTCATMLSLYYKTENYPKALSLFADM 389
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR------SHSHLETSTFNVLMGGL 229
+ NK+ + V+ ++ + K DA +F E R ++L S ++ G +
Sbjct: 390 ERNKIPADEVIRGLIIRIYGKLGLFHDAQSMFEETERLNLLADEKTYLAMSQVHLNSGNV 449
Query: 230 CSAGDVDEAFKFLN----------------GMRSFGCS------------PDIVTYNTLL 261
A DV E K + +++ C+ PD + N +L
Sbjct: 450 VKALDVIEMMKTRDIPLSRFAYIVMLQCYAKIQNVDCAEEAFRALSKTGLPDASSCNDML 509
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG- 320
+ R+ ++A+ +K++ + + ++ Y T + YCK + EA L +M R
Sbjct: 510 NLYTRLNLGEKAKGFIKQI-MVDQVHFDIELYKTAMRVYCKEGMVAEAQDLIVKMGREAR 568
Query: 321 TKPNAF-----------------------------TFNSLIDGFVKVGNMDSALGIYKKM 351
K N F +++ +K GN++ I M
Sbjct: 569 VKDNRFVQTLAESMHIVNKHDKHEAVLNVSQLDVMALGLMLNLRLKEGNLNETKAILNLM 628
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
V +I + R G V+ + + + T + LI+ + ++L
Sbjct: 629 FKTDLGSSAVN--RVISSFVREGDVSKAEMIADIIIRLGLRMEEETIATLIAVYGRQHKL 686
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+EA+ L + P S+ +ID Y + G +++A + +E EK C P T +IL
Sbjct: 687 KEAKRLYLAAGESK-TPGKSVIRSMIDAYVRCGWLEDAYGLFMESAEKGCDPGAVTISIL 745
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ +G+ +A I L D + L +L++G A+ I E +H
Sbjct: 746 VNALTNRGKHREAEHISRTCLEKNIELDTVGYNTLIKAMLEAGKLQCASEIYERMH 801
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 36/193 (18%)
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
+P+ + ++ + +VG + A + +ML GC PD V +++ Y R G+ + L
Sbjct: 185 RPSVVVYTIVLRLYGQVGKIKMAEETFLEMLEVGCEPDAVACGTMLCTYARWGRHSAMLT 244
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ + R I S ++ ++S L K S + VID
Sbjct: 245 FYKAVQERRILLSTSVYNFMLSSLQKK----------------------SFHGKVID--- 279
Query: 442 KSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
+ +EM EE P++FT+T++++ + +G +A+ F +M + G P+E+
Sbjct: 280 ----------LWLEMVEEGVPPNEFTYTLVVSSYAKQGFKEEALKAFGEMKSLGFVPEEV 329
Query: 501 TVRILSSCLLKSG 513
T + S +K+G
Sbjct: 330 TYSSVISLSVKAG 342
>AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19763152-19765136 FORWARD
LENGTH=508
Length = 508
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 152/348 (43%), Gaps = 6/348 (1%)
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
ELL E K V +Y L+ +L K + + A LF+E++ + + L+
Sbjct: 138 ELLREQLWYKPNVG--IYVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEVYTALVSAY 195
Query: 230 CSAGDVDEAFKFLNGMR-SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
+G D AF L M+ S C PD+ TY+ L+ ++ D+ +DLL ++ + P
Sbjct: 196 SRSGRFDAAFTLLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMR-RQGIRP 254
Query: 289 NVRSYTTVISGYCKLSKMKE-ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
N +Y T+I Y K E S+L + KP+++T NS + F G ++
Sbjct: 255 NTITYNTLIDAYGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENC 314
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
Y+K G P++ TF L++ Y + G + M + S ++ T++V+I +
Sbjct: 315 YEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAVMEYMQKYHYSWTIVTYNVVIDAFGR 374
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFT 466
+ L++ L R ++ I P ++ Y ++ D+ ++ +E + D
Sbjct: 375 AGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGRASKADKIGGVLRFIENSDIRLDLVF 434
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGM 514
F L+ + + + + M G PD+IT R + SGM
Sbjct: 435 FNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKITYRTMVKAYRISGM 482
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 81/189 (42%), Gaps = 1/189 (0%)
Query: 147 PDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICL 206
PDS + + +F ++++ + + Q + ++ N ++ LL K +
Sbjct: 290 PDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEPNIRTFNILLDSYGKSGNYKKMSAV 349
Query: 207 FRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR 266
+ + H T+NV++ AGD+ + M+S P VT +L+ R
Sbjct: 350 MEYMQKYHYSWTIVTYNVVIDAFGRAGDLKQMEYLFRLMQSERIFPSCVTLCSLVRAYGR 409
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
+ D+ +L+ + S ++ + ++ Y ++ K E + + M++ G KP+
Sbjct: 410 ASKADKIGGVLRFIE-NSDIRLDLVFFNCLVDAYGRMEKFAEMKGVLELMEKKGFKPDKI 468
Query: 327 TFNSLIDGF 335
T+ +++ +
Sbjct: 469 TYRTMVKAY 477
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 105 bits (263), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 167/377 (44%), Gaps = 54/377 (14%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
NAV + +++ ++ ++D A+ LFR++ S S L+ GL + EA L
Sbjct: 166 NAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDS----SPLCALVAGLIKNERLSEAAWVL 221
Query: 243 NGMRSF--GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG----------LKSKFSPNV 290
S G + YNTL+ G + +V+ AR L ++ + +F NV
Sbjct: 222 GQYGSLVSGREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNV 281
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEM-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
S+ ++I Y K+ + A LFD+M DR + ++N++IDG+V V M+ A ++
Sbjct: 282 VSWNSMIKAYLKVGDVVSARLLFDQMKDR-----DTISWNTMIDGYVHVSRMEDAFALFS 336
Query: 350 KM--------------------------LFHGCPPD-VVTFTSLIEGYCRVGKVNYGLDL 382
+M F P V++ S+I Y + +DL
Sbjct: 337 EMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDL 396
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
+ MN HT + L+S L+ + + + +T ++P ++N +I Y +
Sbjct: 397 FIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSR 455
Query: 443 SGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT- 501
G + E+ I EM K K + T+ +I G+ G A +A+ +F M + G P IT
Sbjct: 456 CGEIMESRRIFDEM--KLKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITF 513
Query: 502 VRILSSCLLKSGMPGEA 518
V +L++C +G+ EA
Sbjct: 514 VSVLNAC-AHAGLVDEA 529
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 118/219 (53%), Gaps = 28/219 (12%)
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK---LSKMKEA 309
+ VT+NT++ G + +E+++AR L + + +V ++ T+ISGY + ++EA
Sbjct: 70 NTVTWNTMISGYVKRREMNQARKLFDVMPKR-----DVVTWNTMISGYVSCGGIRFLEEA 124
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
LFDEM ++F++N++I G+ K + AL +++KM + V+++++I G
Sbjct: 125 RKLFDEM----PSRDSFSWNTMISGYAKNRRIGEALLLFEKM----PERNAVSWSAMITG 176
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL-----KRT 424
+C+ G+V+ + L+ +M ++ S L++ L K+ RL EA +L Q R
Sbjct: 177 FCQNGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWVLGQYGSLVSGRE 232
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPD 463
D+V YN +I GY + G V+ A + ++ + C D
Sbjct: 233 DLV---YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDD 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/403 (19%), Positives = 167/403 (41%), Gaps = 66/403 (16%)
Query: 115 WTYNMLLRSLCQKGLHSSAKLLYD-----CMRFDGKLPDSRLLGFLVSSFALVDRL---- 165
+ YN L+ Q+G +A+ L+D C G R +VS +++
Sbjct: 236 YAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVG 295
Query: 166 -DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
VS LL + ++ + + ++ ++ V ++++DA LF E+ +H ++N+
Sbjct: 296 DVVSARLLFDQMKDR---DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAH----SWNM 348
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPD--IVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
++ G S G+V+ A + F +P+ V++N+++ + K+ A DL + +
Sbjct: 349 MVSGYASVGNVELARHY------FEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNI 402
Query: 283 KSK---------------------------------FSPNVRSYTTVISGYCKLSKMKEA 309
+ + P+V + +I+ Y + ++ E+
Sbjct: 403 EGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVPVHNALITMYSRCGEIMES 462
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
+FDEM K T+N++I G+ GN AL ++ M +G P +TF S++
Sbjct: 463 RRIFDEMK---LKREVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNA 519
Query: 370 YCRVGKVNYG-LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
G V+ M+ I + +S L++ + +EA ++ + P
Sbjct: 520 CAHAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEP 576
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILI 471
+++ ++D NV A+ + E + +P+ T +L+
Sbjct: 577 DKTVWGALLDACRIYNNVGLAH-VAAEAMSRLEPESSTPYVLL 618
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 97/225 (43%), Gaps = 58/225 (25%)
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
SGY + EA +F++++ N T+N++I G+VK M+ A + LF P
Sbjct: 53 SGY-----IAEARDIFEKLEAR----NTVTWNTMISGYVKRREMNQA-----RKLFDVMP 98
Query: 358 P-DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
DVVT+ ++I GY G + + L+EAR
Sbjct: 99 KRDVVTWNTMISGYVSCGGIRF--------------------------------LEEARK 126
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCM 476
L ++ D +N +I GY K+ + EA + +M E+ + +++ +I G C
Sbjct: 127 LFDEMPSRDSFS----WNTMISGYAKNRRIGEALLLFEKMPER---NAVSWSAMITGFCQ 179
Query: 477 KGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
G A+V+F KM SP + L + L+K+ EAA +
Sbjct: 180 NGEVDSAVVLFRKMPVKDSSP----LCALVAGLIKNERLSEAAWV 220
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 110/246 (44%), Gaps = 16/246 (6%)
Query: 91 LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSR 150
+ N L +F+ T EK V ++N ++ + + + A L+ M +G+ PD
Sbjct: 356 VGNVELARHYFEKTPEKHTV-----SWNSIIAAYEKNKDYKEAVDLFIRMNIEGEKPDPH 410
Query: 151 LLGFLVS-SFALVD-RLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
L L+S S LV+ RL + + + V + V++ L+++ + ++ ++ +F
Sbjct: 411 TLTSLLSASTGLVNLRLGMQ---MHQIVVKTVIPDVPVHNALITMYSRCGEIMESRRIFD 467
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
E+ E T+N ++GG G+ EA M+S G P +T+ ++L+
Sbjct: 468 EMKLKR---EVITWNAMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAG 524
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
VD A+ + K P + Y+++++ + +EA + M +P+ +
Sbjct: 525 LVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMP---FEPDKTVW 581
Query: 329 NSLIDG 334
+L+D
Sbjct: 582 GALLDA 587
>AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:16599976-16605994 REVERSE
LENGTH=1089
Length = 1089
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 122/246 (49%), Gaps = 10/246 (4%)
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
V EAF+F + +P + T+N L+ ++++ AR +L+ V +S + + + YT
Sbjct: 452 VKEAFRFTKLI----LNPTMSTFNMLMSVCASSQDIEGARGVLRLV-QESGMTADCKLYT 506
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
T+IS K K+ +F +M SG + N TF +LIDG + G + A G Y +
Sbjct: 507 TLISSCAKSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSK 566
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM--NTRNISASLHTFSVLISYLCKSNRLQ 412
PD V F +LI + G V+ D+ EM T I + L+ C + +++
Sbjct: 567 NVKPDRVVFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVE 626
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
A+++ + + + I P +Y ++ KSG+ D A +I +M+EK PD+ F+ LI
Sbjct: 627 RAKEVYQMIHKYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALI 686
Query: 472 --AGHC 475
AGH
Sbjct: 687 DVAGHA 692
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/367 (22%), Positives = 162/367 (44%), Gaps = 10/367 (2%)
Query: 147 PDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICL 206
P L+S A ++ ++ +L Q + + + +Y L+S K K+D +
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 207 FRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR 266
F ++ S TF L+ G AG V +AF +RS PD V +N L+ +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 267 IKEVDRARDLLKEVGLKS-KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNA 325
VDRA D+L E+ ++ P+ S ++ C +++ A ++ + + G +
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 326 FTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHE 385
+ ++ K G+ D A IYK M PD V F++LI+ ++ + +
Sbjct: 645 EVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLDEAFGILQD 704
Query: 386 MNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGN 445
++ I ++S L+ C + ++A +L ++K + P S N +I C+
Sbjct: 705 AKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALITALCEGNQ 764
Query: 446 VDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT----GCSPDEI 500
+ +A + E++ KP+ T+++L+ + D + +K+L+ G SP+ I
Sbjct: 765 LPKAMEYLDEIKTLGLKPNTITYSMLM----LASERKDDFEVSFKLLSQAKGDGVSPNLI 820
Query: 501 TVRILSS 507
R ++S
Sbjct: 821 MCRCITS 827
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 153/339 (45%), Gaps = 11/339 (3%)
Query: 101 FQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA 160
F+FT KL ++ + T+NML+ A+ + ++ G D +L L+SS A
Sbjct: 456 FRFT--KLILNPTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCA 513
Query: 161 LVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETS 220
++D E+ + + V+ N + L+ + ++ A + L + +
Sbjct: 514 KSGKVDAMFEVFHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRV 573
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRS--FGCSPDIVTYNTLLHGLCRIKEVDRARD--- 275
FN L+ +G VD AF L M++ PD ++ L+ C +V+RA++
Sbjct: 574 VFNALISACGQSGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQ 633
Query: 276 LLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
++ + G++ +P V YT ++ K A S++ +M P+ F++LID
Sbjct: 634 MIHKYGIRG--TPEV--YTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVA 689
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
+D A GI + G ++++SL+ C L+L+ ++ + + ++
Sbjct: 690 GHAKMLDEAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTI 749
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
T + LI+ LC+ N+L +A + L ++K + P Y+
Sbjct: 750 STMNALITALCEGNQLPKAMEYLDEIKTLGLKPNTITYS 788
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 7/196 (3%)
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P TFN L+ +++ A G+ + + G D +T+LI + GKV+ ++
Sbjct: 465 PTMSTFNMLMSVCASSQDIEGARGVLRLVQESGMTADCKLYTTLISSCAKSGKVDAMFEV 524
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
+H+M+ + A+LHTF LI ++ ++ +A L+ ++ P ++N +I +
Sbjct: 525 FHQMSNSGVEANLHTFGALIDGCARAGQVAKAFGAYGILRSKNVKPDRVVFNALISACGQ 584
Query: 443 SGNVDEANAIVVEMEEKC---KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC--SP 497
SG VD A ++ EM+ + PD + L+ C G+ A ++ + G +P
Sbjct: 585 SGAVDRAFDVLAEMKAETHPIDPDHISIGALMKACCNAGQVERAKEVYQMIHKYGIRGTP 644
Query: 498 DEITVRILSSCLLKSG 513
+ T+ + +SC KSG
Sbjct: 645 EVYTIAV-NSC-SKSG 658
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 66/155 (42%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
K + + Y + + S + G A +Y M+ PD L+ LD
Sbjct: 637 KYGIRGTPEVYTIAVNSCSKSGDWDFACSIYKDMKEKDVTPDEVFFSALIDVAGHAKMLD 696
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ +L +A+ +++ + Y +L+ A+ L+ ++ ST N L+
Sbjct: 697 EAFGILQDAKSQGIRLGTISYSSLMGACCNAKDWKKALELYEKIKSIKLRPTISTMNALI 756
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
LC + +A ++L+ +++ G P+ +TY+ L+
Sbjct: 757 TALCEGNQLPKAMEYLDEIKTLGLKPNTITYSMLM 791
>AT1G80880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:30395194-30396921 REVERSE
LENGTH=540
Length = 540
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 149/306 (48%), Gaps = 11/306 (3%)
Query: 188 DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRS 247
D ++ VL H K + A CL R++ + F ++M +A D +A + + M
Sbjct: 159 DLMIWVLGNHQKFNIAWCLIRDMFNVSKDTRKAMF-LMMDRYAAANDTSQAIRTFDIMDK 217
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKL-SKM 306
F +P + LL LCR +++A + + + K F +V + +++G+C + + +
Sbjct: 218 FKHTPYDEAFQGLLCALCRHGHIEKAEEFM--LASKKLFPVDVEGFNVILNGWCNIWTDV 275
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
EA ++ EM PN +++ +I F KVGN+ +L +Y +M G P + + SL
Sbjct: 276 TEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGLAPGIEVYNSL 335
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
+ R + + L ++N + T++ +I LC++ +L AR++L + ++
Sbjct: 336 VYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENL 395
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPD-AI 484
P ++ + ++ N ++ ++ +M+ P + TF +LI G KG+ P+ A+
Sbjct: 396 SPTVDTFH----AFLEAVNFEKTLEVLGQMKISDLGPTEETF-LLILGKLFKGKQPENAL 450
Query: 485 VIFYKM 490
I+ +M
Sbjct: 451 KIWAEM 456
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 120/283 (42%), Gaps = 46/283 (16%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHL---ETSTFNVLMGGLCSAG-DVDEAFKF 241
+ LL L +H ++ A E M + L + FNV++ G C+ DV EA +
Sbjct: 226 AFQGLLCALCRHGHIEKA----EEFMLASKKLFPVDVEGFNVILNGWCNIWTDVTEAKRI 281
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEV-DRAR--DLLKEVGLKSKFSPNVRSYTTVIS 298
M ++ +P+ +Y+ ++ ++ + D R D +K+ GL +P + Y +++
Sbjct: 282 WREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEMKKRGL----APGIEVYNSLVY 337
Query: 299 GYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP 358
+ EA L +++ G KP++ T+NS+I + G +D A + M+ P
Sbjct: 338 VLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKLDVARNVLATMISENLSP 397
Query: 359 DVVTFTSLIE-----------GYCRV--------------GKVNYG------LDLWHEMN 387
V TF + +E G ++ GK+ G L +W EM+
Sbjct: 398 TVDTFHAFLEAVNFEKTLEVLGQMKISDLGPTEETFLLILGKLFKGKQPENALKIWAEMD 457
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
I A+ + I L L++AR++ ++K V P
Sbjct: 458 RFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKGFVGNP 500
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 7/206 (3%)
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA--LGIYKKMLF 353
++ Y + +A FD MD+ P F L+ + G+++ A + K LF
Sbjct: 195 MMDRYAAANDTSQAIRTFDIMDKFKHTPYDEAFQGLLCALCRHGHIEKAEEFMLASKKLF 254
Query: 354 HGCPPDVVTFTSLIEGYCRVG-KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
P DV F ++ G+C + V +W EM I+ + ++S +IS K L
Sbjct: 255 ---PVDVEGFNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLF 311
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILI 471
++ L ++K+ + P +YN ++ + DEA ++ ++ EE KPD T+ +I
Sbjct: 312 DSLRLYDEMKKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMI 371
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSP 497
C G+ A + M++ SP
Sbjct: 372 RPLCEAGKLDVARNVLATMISENLSP 397
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 108/240 (45%), Gaps = 6/240 (2%)
Query: 117 YNMLLRSLCQKGLH-SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N++L C + AK ++ M P+ ++S F+ V L S L E
Sbjct: 261 FNVILNGWCNIWTDVTEAKRIWREMGNYCITPNKDSYSHMISCFSKVGNLFDSLRLYDEM 320
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + VY++L+ VL + + D+A+ L ++L ++ T+N ++ LC AG +
Sbjct: 321 KKRGLAPGIEVYNSLVYVLTREDCFDEAMKLMKKLNEEGLKPDSVTYNSMIRPLCEAGKL 380
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D A L M S SP + T++ L + ++ ++L ++ + S P ++
Sbjct: 381 DVARNVLATMISENLSPTVDTFHAFLEAV----NFEKTLEVLGQMKI-SDLGPTEETFLL 435
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ K + + A ++ EMDR N + + I G + G ++ A IY +M G
Sbjct: 436 ILGKLFKGKQPENALKIWAEMDRFEIVANPALYLATIQGLLSCGWLEKAREIYSEMKSKG 495
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 184/405 (45%), Gaps = 28/405 (6%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N + R SA LY CM G LP+S F++ S A +++
Sbjct: 102 WNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHVL 161
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
++ V+ +L+S+ V++ +L+DA +F + H + ++ L+ G S G ++
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDK----SPHRDVVSYTALIKGYASRGYIE 217
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
A K + + D+V++N ++ G A +L K++ +K+ P+ + TV
Sbjct: 218 NAQKLFDEIPV----KDVVSWNAMISGYAETGNYKEALELFKDM-MKTNVRPDESTMVTV 272
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
+S + ++ + +D G N N+LID + K G +++A G+++++ +
Sbjct: 273 VSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPY--- 329
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
DV+++ +LI GY + L L+ EM S ++S L L A D
Sbjct: 330 -KDVISWNTLIGGYTHMNLYKEALLLFQEMLR---SGETPNDVTMLSILPACAHLG-AID 384
Query: 417 LLRQL------KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTIL 470
+ R + + + S+ +ID Y K G+++ A+ + + K ++ +
Sbjct: 385 IGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLS---SWNAM 441
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCLLKSGM 514
I G M GRA + +F +M G PD+IT V +LS+C SGM
Sbjct: 442 IFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSAC-SHSGM 485
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/359 (20%), Positives = 150/359 (41%), Gaps = 23/359 (6%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF--LVSSFALVDR 164
KL + + L+ Q G A ++D K P ++ + L+ +A
Sbjct: 162 KLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD------KSPHRDVVSYTALIKGYASRGY 215
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
++ +++L E V V ++ ++S + +A+ LF+++M+++ + ST
Sbjct: 216 IENAQKLFDEIPVKDV----VSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVT 271
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
++ +G ++ + + G ++ N L+ + E++ A L + + K
Sbjct: 272 VVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYK- 330
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
+V S+ T+I GY ++ KEA LF EM RSG PN T S++ +G +D
Sbjct: 331 ----DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIG 386
Query: 345 --LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
+ +Y G TSLI+ Y + G + H++ + SL +++ +I
Sbjct: 387 RWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAA----HQVFNSILHKSLSSWNAMI 442
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK 461
R + DL ++++ I P + ++ SG +D I M + K
Sbjct: 443 FGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYK 501
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 94/214 (43%), Gaps = 7/214 (3%)
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+C LS E + ++ +PN +N++ G + SAL +Y M+ G P+
Sbjct: 74 FCILSPHFEGLPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPN 133
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
TF +++ + G + + L+ + LIS ++ RL++A +
Sbjct: 134 SYTFPFVLKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFD 193
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGR 479
+ D+V Y +I GY G ++ A + E+ K D ++ +I+G+ G
Sbjct: 194 KSPHRDVVS----YTALIKGYASRGYIENAQKLFDEIPVK---DVVSWNAMISGYAETGN 246
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSG 513
+A+ +F M+ T PDE T+ + S +SG
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSG 280
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/298 (21%), Positives = 120/298 (40%), Gaps = 82/298 (27%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF------------- 328
K+ PN+ + T+ G+ S A L+ M G PN++TF
Sbjct: 91 FKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAF 150
Query: 329 ----------------------NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
SLI +V+ G ++ A ++ K DVV++T+L
Sbjct: 151 KEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHR----DVVSYTAL 206
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I+GY G + L+ E+ +++ +++ +IS ++ +EA +L + + +T++
Sbjct: 207 IKGYASRGYIENAQKLFDEIPVKDVV----SWNAMISGYAETGNYKEALELFKDMMKTNV 262
Query: 427 VPQPS-----------------------------------IYNHVIDGYCKSGNVDEANA 451
P S I N +ID Y K G ++ A
Sbjct: 263 RPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACG 322
Query: 452 IVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
+ + K D ++ LI G+ +A+++F +ML +G +P+++T + IL +C
Sbjct: 323 LFERLPYK---DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPAC 377
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/356 (19%), Positives = 145/356 (40%), Gaps = 33/356 (9%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK--ELLA 173
++N L+ L+ A LL+ M G+ P+ + ++ + A + +D+ + +
Sbjct: 334 SWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYI 393
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ + V + + +L+ + K ++ A +F ++ H S++N ++ G G
Sbjct: 394 DKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSIL----HKSLSSWNAMIFGFAMHG 449
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
D +F + MR G PD +T+ LL +D R + + + K +P + Y
Sbjct: 450 RADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHY 509
Query: 294 TTVIS--GYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG-IYKK 350
+I G+ L K E +P+ + SL+ GN++ LG + +
Sbjct: 510 GCMIDLLGHSGLFKEAEEMIN-----MMEMEPDGVIWCSLLKACKMHGNVE--LGESFAE 562
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNIS-----ASLHTFSVLISYL 405
L P + ++ L Y G+ N +N + + +S+ SV+ ++
Sbjct: 563 NLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFI 622
Query: 406 CKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK 461
R++ L+ +++ + K+G V + + ++ EMEE+ K
Sbjct: 623 IGDKFHPRNREIYGMLEEMEVLLE------------KAGFVPDTSEVLQEMEEEWK 666
>AT3G09650.1 | Symbols: HCF152, CRM3 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:2958704-2961040
FORWARD LENGTH=778
Length = 778
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 116/241 (48%), Gaps = 4/241 (1%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRS---HSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
+Y L+ +K+ ++ D + + R +SH + T+ ++ +AG +D A + L
Sbjct: 416 IYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVL 475
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
M G + +TYN LL G C+ ++DRA DLL+E+ + P+V SY +I G
Sbjct: 476 AEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCIL 535
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG-CPPDVV 361
+ A + F+EM G P ++ +L+ F G A ++ +M+ D++
Sbjct: 536 IDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLI 595
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
+ L+EGYCR+G + + M ++ T+ L + + ++ + +A L +++
Sbjct: 596 AWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKPGDALLLWKEI 655
Query: 422 K 422
K
Sbjct: 656 K 656
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 127/271 (46%), Gaps = 6/271 (2%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK---PNAFTFNSLIDGFVKV 338
L F+P+ R YTT++ GY K ++ + + + + M R + P+ T+ +++ FV
Sbjct: 406 LPKVFAPDSRIYTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNA 465
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT-RNISASLHT 397
G MD A + +M G P + +T+ L++GYC+ +++ DL EM I + +
Sbjct: 466 GLMDRARQVLAEMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVS 525
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM- 456
++++I + A +++ I P Y ++ + SG AN + EM
Sbjct: 526 YNIIIDGCILIDDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMM 585
Query: 457 -EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
+ + K D + +L+ G+C G DA + +M G P+ T L++ + ++ P
Sbjct: 586 NDPRVKVDLIAWNMLVEGYCRLGLIEDAQRVVSRMKENGFYPNVATYGSLANGVSQARKP 645
Query: 516 GEAARIKESLHENQGDSLKKSYYEGTNSDVP 546
G+A + + + E K++ + ++ P
Sbjct: 646 GDALLLWKEIKERCAVKKKEAPSDSSSDPAP 676
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 128/320 (40%), Gaps = 67/320 (20%)
Query: 117 YNMLLRSLCQKG-LHSSAKLLYDCMRFDGK--LPDSRLLGFLVSSFALVDRLDVSKELLA 173
Y L++ + G + +A++L R D + PD +VS+F +D ++++LA
Sbjct: 417 YTTLMKGYMKNGRVADTARMLEAMRRQDDRNSHPDEVTYTTVVSAFVNAGLMDRARQVLA 476
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHS-HLETSTFNVLMGGLCSA 232
E V N + Y+ LL K ++D A L RE+ + ++N+++ G
Sbjct: 477 EMARMGVPANRITYNVLLKGYCKQLQIDRAEDLLREMTEDAGIEPDVVSYNIIIDGCILI 536
Query: 233 GDVDEAFKFLNGMRSFGCSP------------------------------------DIVT 256
D A F N MR+ G +P D++
Sbjct: 537 DDSAGALAFFNEMRTRGIAPTKISYTTLMKAFAMSGQPKLANRVFDEMMNDPRVKVDLIA 596
Query: 257 YNTLLHGLCR---IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
+N L+ G CR I++ R +KE G F PNV +Y ++ +G + K +A L+
Sbjct: 597 WNMLVEGYCRLGLIEDAQRVVSRMKENG----FYPNVATYGSLANGVSQARKPGDALLLW 652
Query: 314 DEM-------------DRSGT------KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
E+ D S KP+ ++L D V+ AL I M +
Sbjct: 653 KEIKERCAVKKKEAPSDSSSDPAPPMLKPDEGLLDTLADICVRAAFFKKALEIIACMEEN 712
Query: 355 GCPPDVVTFTSL-IEGYCRV 373
G PP+ + + +E + R+
Sbjct: 713 GIPPNKTKYKKIYVEMHSRM 732
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 190/418 (45%), Gaps = 32/418 (7%)
Query: 78 HLTPSLV--LEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKL 135
H+ P L+ L + ++ N L + F +E NVH N L+R+ Q A
Sbjct: 52 HIAPKLISALSLCRQTN---LAVRVFNQVQEP-NVH----LCNSLIRAHAQNSQPYQAFF 103
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV 195
++ M+ G D+ FL+ + + L V K + + + + V + L+
Sbjct: 104 VFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNALIDCYS 163
Query: 196 KHNKLD--DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
+ L DA+ LF ++ S +T ++N ++GGL AG++ +A + + M D
Sbjct: 164 RCGGLGVRDAMKLFEKM----SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR----D 215
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
++++NT+L G R +E+ +A +L +++ + N S++T++ GY K M+ A +F
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKMPER-----NTVSWSTMVMGYSKAGDMEMARVMF 270
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
D+M N T+ +I G+ + G + A + +M+ G D S++
Sbjct: 271 DKMPLPAK--NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTES 328
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
G ++ G+ + + N+ ++ + + L+ K L++A D+ + + D+V +
Sbjct: 329 GLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKKDLVS----W 384
Query: 434 NHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
N ++ G G+ EA + M E +PDK TF ++ G + I FY M
Sbjct: 385 NTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSM 442
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 136/280 (48%), Gaps = 19/280 (6%)
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C V +A K M D V++N++L GL + E+ AR L E+ + +
Sbjct: 165 CGGLGVRDAMKLFEKM----SERDTVSWNSMLGGLVKAGELRDARRLFDEMPQR-----D 215
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
+ S+ T++ GY + +M +A LF++M + N ++++++ G+ K G+M+ A ++
Sbjct: 216 LISWNTMLDGYARCREMSKAFELFEKM----PERNTVSWSTMVMGYSKAGDMEMARVMFD 271
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
KM +VVT+T +I GY G + L +M + +++ +S
Sbjct: 272 KMPLPA--KNVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESG 329
Query: 410 RLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTI 469
L + LKR+++ + N ++D Y K GN+ +A + ++ +K D ++
Sbjct: 330 LLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK---DLVSWNT 386
Query: 470 LIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
++ G + G +AI +F +M G PD++T + +L SC
Sbjct: 387 MLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSC 426
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/365 (23%), Positives = 159/365 (43%), Gaps = 67/365 (18%)
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
L+ K+L A+ + + + L+S L + + A+ +F ++ + HL N
Sbjct: 32 LNQVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHL----CNS 87
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH---GLCRIKEVDRARDLLKEVG 281
L+ +AF + M+ FG D TY LL G + V + ++++G
Sbjct: 88 LIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLG 147
Query: 282 LKSK-FSPNVRSYTTVISGY--CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
L S + PN +I Y C +++A LF++M T ++NS++ G VK
Sbjct: 148 LSSDIYVPN-----ALIDCYSRCGGLGVRDAMKLFEKMSERDT----VSWNSMLGGLVKA 198
Query: 339 GNMDSALGIYKKMLFHGCPP-DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
G + A + LF P D++++ ++++GY R +++ +L+ +M RN +
Sbjct: 199 GELRDA-----RRLFDEMPQRDLISWNTMLDGYARCREMSKAFELFEKMPERNTVS---- 249
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
++ ++ GY K+G+++ A + +M
Sbjct: 250 -----------------------------------WSTMVMGYSKAGDMEMARVMFDKMP 274
Query: 458 EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV-RILSSCLLKSGMPG 516
K + T+TI+IAG+ KG +A + +M+A+G D V IL++C +SG+
Sbjct: 275 LPAK-NVVTWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAAC-TESGLLS 332
Query: 517 EAARI 521
RI
Sbjct: 333 LGMRI 337
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/217 (21%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ +++ +KGL A L D M G D+ + ++++ L + + +
Sbjct: 282 TWTIIIAGYAEKGLLKEADRLVDQMVASGLKFDAAAVISILAACTESGLLSLGMRIHSIL 341
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + + NA V + LL + K L A +F ++ + + ++N ++ GL G
Sbjct: 342 KRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK----DLVSWNTMLHGLGVHGHG 397
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA + + MR G PD VT+ +L +D D + P V Y
Sbjct: 398 KEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYFYSMEKVYDLVPQVEHYGC 457
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
++ ++ ++KEA + M +PN + +L+
Sbjct: 458 LVDLLGRVGRLKEAIKVVQTMP---MEPNVVIWGALL 491
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 194/443 (43%), Gaps = 32/443 (7%)
Query: 93 NPILGFKFFQFTREKLNVHHSFW-------------TYNMLLRSLCQKGLHSSAKLLYDC 139
NP K F F +L H S+ +N +++ + LY
Sbjct: 65 NPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPDVVVWNNMIKGWSKVDCDGEGVRLYLN 124
Query: 140 MRFDGKLPDSRLLGFLVSSFAL-VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHN 198
M +G PDS FL++ L K+L C+ V+ + + LVK
Sbjct: 125 MLKEGVTPDSHTFPFLLNGLKRDGGALACGKKL----HCHVVKFGLGSNLYVQNALVKMY 180
Query: 199 KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN 258
L + + R + + ++N+++ G + +E+ + L M SP VT
Sbjct: 181 SLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYEESIELLVEMERNLVSPTSVTLL 240
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+L ++K+ D + + + V + K P++R +++ Y +M A +F R
Sbjct: 241 LVLSACSKVKDKDLCKRVHEYVS-ECKTEPSLRLENALVNAYAACGEMDIAVRIF----R 295
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
S + ++ S++ G+V+ GN+ A + +M D +++T +I+GY R G N
Sbjct: 296 SMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVR----DRISWTIMIDGYLRAGCFNE 351
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L+++ EM + + T +++ L+ + + + I + N +ID
Sbjct: 352 SLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYIDKNKIKNDVVVGNALID 411
Query: 439 GYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
Y K G ++A + +M+++ DKFT+T ++ G G+ +AI +F++M PD
Sbjct: 412 MYFKCGCSEKAQKVFHDMDQR---DKFTWTAMVVGLANNGQGQEAIKVFFQMQDMSIQPD 468
Query: 499 EIT-VRILSSCLLKSGMPGEAAR 520
+IT + +LS+C SGM +A +
Sbjct: 469 DITYLGVLSAC-NHSGMVDQARK 490
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/393 (22%), Positives = 169/393 (43%), Gaps = 33/393 (8%)
Query: 107 KLNVHHSFWTYNMLLR--SLCQKGLHSSAKLLYD--CMRFDGKLPDSRLLGFLVSSFALV 162
K + + + N L++ SLC GL A+ ++D C D ++S + +
Sbjct: 163 KFGLGSNLYVQNALVKMYSLC--GLMDMARGVFDRRCKE------DVFSWNLMISGYNRM 214
Query: 163 DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDA-ICLFRELMRSHSHLETST 221
+ S ELL E + N V +V LL VL +K+ D +C S E S
Sbjct: 215 KEYEESIELLVEMERNLVSPTSVT---LLLVLSACSKVKDKDLCKRVHEYVSECKTEPSL 271
Query: 222 F--NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
N L+ + G++D A + M++ D++++ +++ G + AR +
Sbjct: 272 RLENALVNAYAACGEMDIAVRIFRSMKA----RDVISWTSIVKGYVERGNLKLARTYFDQ 327
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
+ ++ + S +T +I GY + E+ +F EM +G P+ FT S++ +G
Sbjct: 328 MPVRDRIS-----WTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLG 382
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
+++ I + + DVV +LI+ Y + G ++H+M+ R+ T++
Sbjct: 383 SLEIGEWIKTYIDKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRD----KFTWT 438
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM--E 457
++ L + + QEA + Q++ I P Y V+ SG VD+A +M +
Sbjct: 439 AMVVGLANNGQGQEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSD 498
Query: 458 EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
+ +P + ++ G +A I KM
Sbjct: 499 HRIEPSLVHYGCMVDMLGRAGLVKEAYEILRKM 531
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/217 (18%), Positives = 97/217 (44%), Gaps = 7/217 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++ +++ + G + + ++ M+ G +PD + ++++ A + L++ + +
Sbjct: 335 SWTIMIDGYLRAGCFNESLEIFREMQSAGMIPDEFTMVSVLTACAHLGSLEIGEWIKTYI 394
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
NK++ + VV + L+ + K + A +F ++ + T+ ++ GL + G
Sbjct: 395 DKNKIKNDVVVGNALIDMYFKCGCSEKAQKVFHDM----DQRDKFTWTAMVVGLANNGQG 450
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA K M+ PD +TY +L VD+AR ++ + P++ Y
Sbjct: 451 QEAIKVFFQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGC 510
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
++ + +KEA + +M PN+ + +L+
Sbjct: 511 MVDMLGRAGLVKEAYEILRKMP---MNPNSIVWGALL 544
>AT2G38420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16091093-16092454 FORWARD
LENGTH=453
Length = 453
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 171/380 (45%), Gaps = 54/380 (14%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYD---CMRFDGKLPDSRLLGFLVSSFALVDRLDVSKEL 171
Y ++++L + L + + +LY +FD P+S + +++++ R++ + E+
Sbjct: 74 AYRFVIKTLAKSSQLENISSVLYHLEVSEKFDT--PES-IFRDVIAAYGFSGRIEEAIEV 130
Query: 172 LAEAQCNKVQVNAVVYDNLLSVLV-KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
+ + +A + LL VLV K L+ + + R LE STF +L+ LC
Sbjct: 131 FFKIPNFRCVPSAYTLNALLLVLVRKRQSLELVPEILVKACRMGVRLEESTFGILIDALC 190
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKE------VDRARDLLKEVGLKS 284
G+VD A + + M D Y+ LL +C+ K+ + DL K +
Sbjct: 191 RIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDVIGYLEDLRK-----T 245
Query: 285 KFSPNVRSYTTVI-----SGYCK-----LSKMK-------------------------EA 309
+FSP +R YT V+ G K L++MK +A
Sbjct: 246 RFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQGVIADEDYPKA 305
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
LFDE+ G P+ +T+N I+G K +++ AL + M G P+VVT+ LI+
Sbjct: 306 DKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPNVVTYNILIKA 365
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
+ G ++ LW EM T ++ + HTF ++IS + + + A LL + ++ +
Sbjct: 366 LVKAGDLSRAKTLWKEMETNGVNRNSHTFDIMISAYIEVDEVVCAHGLLEEAFNMNVFVK 425
Query: 430 PSIYNHVIDGYCKSGNVDEA 449
S VI C+ G +D+A
Sbjct: 426 SSRIEEVISRLCEKGLMDQA 445
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 132/330 (40%), Gaps = 45/330 (13%)
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
L+ + C P Y ++ L + +++ +L + + KF + VI+ Y
Sbjct: 59 LLSSFQLHNCEPTPQAYRFVIKTLAKSSQLENISSVLYHLEVSEKFDTPESIFRDVIAAY 118
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
+++EA +F ++ P+A+T N+L+ V+ +L + ++L C V
Sbjct: 119 GFSGRIEEAIEVFFKIPNFRCVPSAYTLNALLLVLVR---KRQSLELVPEILVKACRMGV 175
Query: 361 ----VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI------------------------- 391
TF LI+ CR+G+V+ +L M+ ++
Sbjct: 176 RLEESTFGILIDALCRIGEVDCATELVRYMSQDSVIVDPRLYSRLLSSVCKHKDSSCFDV 235
Query: 392 ------------SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
S L ++V++ +L + R +E +L Q+K + P Y V+ G
Sbjct: 236 IGYLEDLRKTRFSPGLRDYTVVMRFLVEGGRGKEVVSVLNQMKCDRVEPDLVCYTIVLQG 295
Query: 440 YCKSGNVDEANAIVVE-MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
+ +A+ + E + PD +T+ + I G C + A+ + M G P+
Sbjct: 296 VIADEDYPKADKLFDELLLLGLAPDVYTYNVYINGLCKQNDIEGALKMMSSMNKLGSEPN 355
Query: 499 EITVRILSSCLLKSGMPGEAARIKESLHEN 528
+T IL L+K+G A + + + N
Sbjct: 356 VVTYNILIKALVKAGDLSRAKTLWKEMETN 385
>AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:18897510-18899645 REVERSE LENGTH=711
Length = 711
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 153/333 (45%), Gaps = 20/333 (6%)
Query: 207 FRELMRSHSH-----------LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
RE ++H+ +ET +NV M L + M G D +
Sbjct: 163 LREWQKTHTFFNWVKSKSLFPMETIFYNVTMKSLRFGRQFQLIEEMALEMVKDGVELDNI 222
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
TY+T++ R ++A + + + K+ P+ +Y+ ++ Y K K++E SL++
Sbjct: 223 TYSTIITCAKRCNLYNKAIEWFERM-YKTGLMPDEVTYSAILDVYSKSGKVEEVLSLYER 281
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
+G KP+A F+ L F + G+ D + ++M P+VV + +L+E R GK
Sbjct: 282 AVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEMKSMDVKPNVVVYNTLLEAMGRAGK 341
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNH 435
L++EM ++ + T + L+ K+ ++A L ++K +YN
Sbjct: 342 PGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQLWEEMKAKKWPMDFILYNT 401
Query: 436 VIDGYCKSGNVDEANAIVVEMEE--KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
+++ G +EA + +M+E +C+PD F++T ++ + G+A A+ +F +ML
Sbjct: 402 LLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYGSGGKAEKAMELFEEMLKA 461
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESLH 526
G + + L CL G+A RI + ++
Sbjct: 462 GVQVNVMGCTCLVQCL------GKAKRIDDVVY 488
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 101/244 (41%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TY+ +L + G LY+ G PD+ L F D + +L E
Sbjct: 258 TYSAILDVYSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQEM 317
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ V+ N VVY+ LL + + K A LF E++ + T L+ A
Sbjct: 318 KSMDVKPNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWA 377
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+A + M++ D + YNTLL+ I + A L ++ + P+ SYT
Sbjct: 378 RDALQLWEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTA 437
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+++ Y K ++A LF+EM ++G + N L+ K +D + ++ + G
Sbjct: 438 MLNIYGSGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDDVVYVFDLSIKRG 497
Query: 356 CPPD 359
PD
Sbjct: 498 VKPD 501
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 118/282 (41%), Gaps = 39/282 (13%)
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+E+ E + V+++ + Y +++ + N + AI F + ++ + T++ ++
Sbjct: 206 EEMALEMVKDGVELDNITYSTIITCAKRCNLYNKAIEWFERMYKTGLMPDEVTYSAILDV 265
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS-KFS 287
+G V+E + G PD + ++ L + D R +L+E +KS
Sbjct: 266 YSKSGKVEEVLSLYERAVATGWKPDAIAFSVLGKMFGEAGDYDGIRYVLQE--MKSMDVK 323
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
PNV Y T++ + K A SLF+EM +G PN T +L+ + K AL +
Sbjct: 324 PNVVVYNTLLEAMGRAGKPGLARSLFNEMLEAGLTPNEKTLTALVKIYGKARWARDALQL 383
Query: 348 YKKM------------------------------LFHG------CPPDVVTFTSLIEGYC 371
+++M LF+ C PD ++T+++ Y
Sbjct: 384 WEEMKAKKWPMDFILYNTLLNMCADIGLEEEAERLFNDMKESVQCRPDNFSYTAMLNIYG 443
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
GK ++L+ EM + ++ + L+ L K+ R+ +
Sbjct: 444 SGGKAEKAMELFEEMLKAGVQVNVMGCTCLVQCLGKAKRIDD 485
>AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 41/365 (11%)
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
C + ++ YD + +L K K D + F E MR + +T +M AG+ +
Sbjct: 114 CKGHKHSSDAYDMAVDILGKAKKWD-RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWE 172
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + + FG + + N LL LC+ K V++AR +L + LKS +P
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL--LQLKSHITP-------- 222
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
NA TFN I G+ K ++ AL ++M HG
Sbjct: 223 ---------------------------NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P V+++T++I YC+ + ++ EM + T++ ++S L +EA
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEE-KCKPDKFTFTILIAGH 474
+ ++KR+ P YN +I ++G ++EA + VEM E + T+ +IA +
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 475 CMKGRAPDAIVIFYKMLATG-CSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSL 533
C AI + +M ++ C+PD T + L K G E ++ + + SL
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 435
Query: 534 KKSYY 538
+S Y
Sbjct: 436 DESTY 440
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 40/278 (14%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
LL L K +++ A + +L +SH TFN+ + G C A V+EA + M+ G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
P +++Y T++ C+ E + ++L E+ PN +YTT++S + +EA
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS-PPNSITYTTIMSSLNAQKEFEEA 313
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK-KMLFHGCPPDVVTFTSLIE 368
+ M RSG KP++ +N LI + G ++ A +++ +M G + T+ S+I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 369 GYCRVGKVNYGLDLWHEMNTRNI------------------------------------- 391
YC + + ++L EM + N+
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
S T++ LI LC++N + A L ++ DI P+
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 145/318 (45%), Gaps = 6/318 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL-PDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ N+LL +LC++ A+++ ++ + P++ + + +R++ + + E
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVL--LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + + Y ++ + + + E+ + S + T+ +M L + +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+EA + M+ GC PD + YN L+H L R ++ A + + + S N +Y
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSG-TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
++I+ YC + +A L EM+ S P+ T+ L+ K G++ + K+M+
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 354 -HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
H D T+T LI+ CR + L+ EM +++I+ T +L+ + K N +
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN-MH 488
Query: 413 EARDLLRQLKRTDIVPQP 430
E+ + + + +T + P
Sbjct: 489 ESAERIEHIMKTVKLTAP 506
>AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1084136-1085662 FORWARD
LENGTH=508
Length = 508
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 157/365 (43%), Gaps = 41/365 (11%)
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
C + ++ YD + +L K K D + F E MR + +T +M AG+ +
Sbjct: 114 CKGHKHSSDAYDMAVDILGKAKKWD-RMKEFVERMRGDKLVTLNTVAKIMRRFAGAGEWE 172
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + + FG + + N LL LC+ K V++AR +L + LKS +P
Sbjct: 173 EAVGIFDRLGEFGLEKNTESMNLLLDTLCKEKRVEQARVVL--LQLKSHITP-------- 222
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
NA TFN I G+ K ++ AL ++M HG
Sbjct: 223 ---------------------------NAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 255
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
P V+++T++I YC+ + ++ EM + T++ ++S L +EA
Sbjct: 256 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 315
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIV-VEMEE-KCKPDKFTFTILIAGH 474
+ ++KR+ P YN +I ++G ++EA + VEM E + T+ +IA +
Sbjct: 316 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMY 375
Query: 475 CMKGRAPDAIVIFYKMLATG-CSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSL 533
C AI + +M ++ C+PD T + L K G E ++ + + SL
Sbjct: 376 CHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSL 435
Query: 534 KKSYY 538
+S Y
Sbjct: 436 DESTY 440
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 122/278 (43%), Gaps = 40/278 (14%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
LL L K +++ A + +L +SH TFN+ + G C A V+EA + M+ G
Sbjct: 196 LLDTLCKEKRVEQARVVLLQL-KSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHG 254
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
P +++Y T++ C+ E + ++L E+ PN +YTT++S + +EA
Sbjct: 255 FRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGS-PPNSITYTTIMSSLNAQKEFEEA 313
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK-KMLFHGCPPDVVTFTSLIE 368
+ M RSG KP++ +N LI + G ++ A +++ +M G + T+ S+I
Sbjct: 314 LRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIA 373
Query: 369 GYCRVGKVNYGLDLWHEMNTRNI------------------------------------- 391
YC + + ++L EM + N+
Sbjct: 374 MYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHL 433
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
S T++ LI LC++N + A L ++ DI P+
Sbjct: 434 SLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPR 471
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/318 (20%), Positives = 145/318 (45%), Gaps = 6/318 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKL-PDSRLLGFLVSSFALVDRLDVSKELLAE 174
+ N+LL +LC++ A+++ ++ + P++ + + +R++ + + E
Sbjct: 192 SMNLLLDTLCKEKRVEQARVVL--LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQE 249
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + + + Y ++ + + + E+ + S + T+ +M L + +
Sbjct: 250 MKGHGFRPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKE 309
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYT 294
+EA + M+ GC PD + YN L+H L R ++ A + + + S N +Y
Sbjct: 310 FEEALRVATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYN 369
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSG-TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLF 353
++I+ YC + +A L EM+ S P+ T+ L+ K G++ + K+M+
Sbjct: 370 SMIAMYCHHDEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVT 429
Query: 354 -HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
H D T+T LI+ CR + L+ EM +++I+ T +L+ + K N +
Sbjct: 430 KHHLSLDESTYTFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKN-MH 488
Query: 413 EARDLLRQLKRTDIVPQP 430
E+ + + + +T + P
Sbjct: 489 ESAERIEHIMKTVKLTAP 506
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 164/359 (45%), Gaps = 21/359 (5%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N ++N++S VK L A +F S + ++N ++ G G++ EA F
Sbjct: 112 NLYSWNNMVSGYVKSGMLVRARVVFD----SMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
R G + ++ LL + +++ R +V L + F NV ++I Y K
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQV-LVAGFLSNVVLSCSIIDAYAK 226
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
+M+ A FDEM T + + +LI G+ K+G+M++A ++ +M + V+
Sbjct: 227 CGQMESAKRCFDEM----TVKDIHIWTTLISGYAKLGDMEAAEKLFCEMP----EKNPVS 278
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS---NRLQEARDLLR 419
+T+LI GY R G N LDL+ +M + TFS S LC S L+ +++
Sbjct: 279 WTALIAGYVRQGSGNRALDLFRKMIALGVKPEQFTFS---SCLCASASIASLRHGKEIHG 335
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGR 479
+ RT++ P + + +ID Y KSG+++ + + ++ K D + +I+ G
Sbjct: 336 YMIRTNVRPNAIVISSLIDMYSKSGSLEASERVFRICDD--KHDCVFWNTMISALAQHGL 393
Query: 480 APDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
A+ + M+ P+ T+ ++ + SG+ E R ES+ G + +Y
Sbjct: 394 GHKALRMLDDMIKFRVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHY 452
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 50/269 (18%)
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
LK G K PN +I Y K K +A +FD+M N +++N+++ G+V
Sbjct: 72 LKITGFKR---PNTLLSNHLIGMYMKCGKPIDACKVFDQMHLR----NLYSWNNMVSGYV 124
Query: 337 KVGNMDSALGIYKKMLFHGCPP-DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
K G + + +++F P DVV++ +++ GY + G ++ L + E I +
Sbjct: 125 KSGML-----VRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIKFNE 179
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQL----------------------------KR---T 424
+F+ L++ KS +LQ R Q+ KR
Sbjct: 180 FSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDE 239
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAI 484
V I+ +I GY K G+++ A + EM EK + ++T LIAG+ +G A+
Sbjct: 240 MTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEK---NPVSWTALIAGYVRQGSGNRAL 296
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSG 513
+F KM+A G P++ T SSCL S
Sbjct: 297 DLFRKMIALGVKPEQFT---FSSCLCASA 322
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/367 (20%), Positives = 152/367 (41%), Gaps = 39/367 (10%)
Query: 109 NVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
N+H + W Y RS + S A LL C++ SR +L ++
Sbjct: 159 NLHEALWFYKEFRRSGIKFNEFSFAGLLTACVK-------SR-------------QLQLN 198
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
++ + N V+ +++ K +++ A F E+ H+ T+ L+ G
Sbjct: 199 RQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKDIHIWTT----LISG 254
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
GD++ A K M + V++ L+ G R +RA DL +++ + P
Sbjct: 255 YAKLGDMEAAEKLFCEMP----EKNPVSWTALIAGYVRQGSGNRALDLFRKM-IALGVKP 309
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
++++ + ++ ++ + M R+ +PNA +SLID + K G+++++
Sbjct: 310 EQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEAS---- 365
Query: 349 KKMLFHGCPP--DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
+ +F C D V + ++I + G + L + +M + + T V+++
Sbjct: 366 -ERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVILNACS 424
Query: 407 KSNRLQEARDLLRQLK-RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF 465
S ++E + + IVP Y +ID ++G E + EM +PDK
Sbjct: 425 HSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIEEM--PFEPDKH 482
Query: 466 TFTILIA 472
+ ++
Sbjct: 483 IWNAILG 489
>AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15009605-15012319 FORWARD
LENGTH=904
Length = 904
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/452 (22%), Positives = 186/452 (41%), Gaps = 74/452 (16%)
Query: 149 SRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFR 208
S +LG ++ ++ V ++DV +L + N +++N + +L+ VKH +DD + L R
Sbjct: 453 SSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLR 512
Query: 209 ELMRSHSHLETSTFNVLM------GGLCSA-----------------------------G 233
E S E+ +++L+ G L A G
Sbjct: 513 EKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMG 572
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTL---------LHGLCRIKEV-DRARDLLKEVGL- 282
+ EA K ++S G D + ++ + L C + E+ D +D++ +V L
Sbjct: 573 EFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLF 632
Query: 283 ------------------------KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
KS N Y VI+ + + E S F+EM R
Sbjct: 633 RDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIR 692
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
G PN TFN L+D + K ++ HG DV+++ ++I Y +
Sbjct: 693 YGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGVV-DVISYNTIIAAYGKNKDYTN 751
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
M S SL ++ L+ K ++++ R +L+++K++ P YN +I+
Sbjct: 752 MSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMIN 811
Query: 439 GYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP 497
Y + G +DE ++ E++E PD ++ LI + + G +A+ + +M P
Sbjct: 812 IYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIP 871
Query: 498 DEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
D++T L + L ++ EA IK SL Q
Sbjct: 872 DKVTYTNLVTALRRNDEFLEA--IKWSLWMKQ 901
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 112/508 (22%), Positives = 205/508 (40%), Gaps = 69/508 (13%)
Query: 76 GKHLTPSLVLEVVKR---------LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQ 126
G + SL+L V+ R L + GF FQ S+ +N ++ + +
Sbjct: 172 GNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQ---------KSYQVFNTVIYACTK 222
Query: 127 KGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQ-VNAV 185
KG A + M G P+ +G L+ + +V + A + K V
Sbjct: 223 KGNVKLASKWFHMMLEFGVRPNVATIGMLMGLYQ--KNWNVEEAEFAFSHMRKFGIVCES 280
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
Y +++++ + D A + + + L+ + V++ G ++ A L M
Sbjct: 281 AYSSMITIYTRLRLYDKAEEVIDLMKQDRVRLKLENWLVMLNAYSQQGKMELAESILVSM 340
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---LKEVGLKSKFSPNVRSYTTVISGYCK 302
+ G SP+I+ YNTL+ G +I +++ A+ L L +GL+ P+ SY ++I G+ +
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLE----PDETSYRSMIEGWGR 396
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLID----------------------------- 333
+EA + E+ R G KPN+F +LI+
Sbjct: 397 ADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSIL 456
Query: 334 -----GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
+ KVG +D + K + + +F+SL+ Y + G V+ L L E
Sbjct: 457 GIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLLREKKW 516
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
R+ + H + +LI +S +L +A + +D I + +ID Y G E
Sbjct: 517 RDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSE 576
Query: 449 ANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKM-LATGCSPD----EITV 502
A + + ++ D+ F+I++ + G +A + M PD +
Sbjct: 577 AEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDML 636
Query: 503 RILSSCLLKSGMPGEAARIKES-LHENQ 529
RI C L+ + RI++S +H NQ
Sbjct: 637 RIYQKCDLQDKLQHLYYRIRKSGIHWNQ 664
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 132/273 (48%), Gaps = 10/273 (3%)
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
+PD L ++ + D D + L + + + N +Y+ +++ + LD+
Sbjct: 626 VPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDELSG 685
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM----RSFGCSPDIVTYNTLL 261
F E++R T TFNVL+ A + FK +N + + G D+++YNT++
Sbjct: 686 TFEEMIRYGFTPNTVTFNVLLDVYGKA----KLFKKVNELFLLAKRHGV-VDVISYNTII 740
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
+ K+ +K + FS ++ +Y T++ Y K +M++ S+ M +S +
Sbjct: 741 AAYGKNKDYTNMSSAIKNMQFDG-FSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTS 799
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
P+ +T+N +I+ + + G +D + K++ G PD+ ++ +LI+ Y G V +
Sbjct: 800 GPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVG 859
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
L EM RNI T++ L++ L +++ EA
Sbjct: 860 LVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEA 892
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 174/410 (42%), Gaps = 85/410 (20%)
Query: 176 QCN-KVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLET-STFNVLMGGLCSAG 233
+CN K+ N V Y +L VL + + D A L +EL H ++ FN ++ G
Sbjct: 165 RCNGKLVGNFVAYSLILRVLGRREEWDRAEDLIKELCGFHEFQKSYQVFNTVIYACTKKG 224
Query: 234 DVDEAFKFLNGMRSFGCSPDIVT----------------------------------YNT 259
+V A K+ + M FG P++ T Y++
Sbjct: 225 NVKLASKWFHMMLEFGVRPNVATIGMLMGLYQKNWNVEEAEFAFSHMRKFGIVCESAYSS 284
Query: 260 LLHGLCRIKEVDRAR---DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
++ R++ D+A DL+K+ ++ K + ++ +++ Y + KM+ A S+ M
Sbjct: 285 MITIYTRLRLYDKAEEVIDLMKQDRVRLK----LENWLVMLNAYSQQGKMELAESILVSM 340
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
+ +G PN +N+LI G+ K+ M++A G++ ++ G PD ++ S+IEG+ R
Sbjct: 341 EAAGFSPNIIAYNTLITGYGKIFKMEAAQGLFHRLCNIGLEPDETSYRSMIEGWGRADNY 400
Query: 377 NYGLDLWHEM-------NTRNI-------------SASLHTFSVLISYLCK-SNRLQEAR 415
+ E+ N+ N+ ++ T + C+ S+ L
Sbjct: 401 EEAKHYYQELKRCGYKPNSFNLFTLINLQAKYGDRDGAIKTIEDMTGIGCQYSSILGIIL 460
Query: 416 DLLRQLKRTDIVP---QPSIYNHV----------IDGYCKSGNVDEANAIVVEMEEKCKP 462
++ + D+VP + S +NH+ + Y K G VD+ ++ E+K +
Sbjct: 461 QAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFSSLVMAYVKHGMVDDCLGLL--REKKWRD 518
Query: 463 DKFT---FTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
F + +LI G+ DA+ I+ + S +EI + I S+ +
Sbjct: 519 SAFESHLYHLLICSCKESGQLTDAVKIYNHKME---SDEEINLHITSTMI 565
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 144/322 (44%), Gaps = 25/322 (7%)
Query: 128 GLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQV----- 182
G S A+ LY ++ G + D R+ F++V R+ V L EA C+ +++
Sbjct: 572 GEFSEAEKLYLNLKSSGVVLD-RI------GFSIVVRMYVKAGSLEEA-CSVLEIMDEQK 623
Query: 183 ----NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEA 238
+ ++ ++L + K + D L+ + +S H +N ++ A +DE
Sbjct: 624 DIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKSGIHWNQEMYNCVINCCARALPLDEL 683
Query: 239 FKFLNGMRSFGCSPDIVTYNTLL--HGLCRI-KEVDRARDLLKEVGLKSKFSPNVRSYTT 295
M +G +P+ VT+N LL +G ++ K+V+ L K G+ +V SY T
Sbjct: 684 SGTFEEMIRYGFTPNTVTFNVLLDVYGKAKLFKKVNELFLLAKRHGV-----VDVISYNT 738
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+I+ Y K SS M G + +N+L+D + K M+ I K+M
Sbjct: 739 IIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKST 798
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD T+ +I Y G ++ D+ E+ + L +++ LI ++EA
Sbjct: 799 SGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAV 858
Query: 416 DLLRQLKRTDIVPQPSIYNHVI 437
L+++++ +I+P Y +++
Sbjct: 859 GLVKEMRGRNIIPDKVTYTNLV 880
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 128/292 (43%), Gaps = 16/292 (5%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGC---SPDIVTYNTLLHGLCRIKEVDRARDLL 277
++NV + G + + E+F M GC PD TY L ++ +L
Sbjct: 120 SWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHMIL 179
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
V LK + + I + M+ A +FDE + ++N LI+G+ K
Sbjct: 180 GHV-LKLRLELVSHVHNASIHMFASCGDMENARKVFDE----SPVRDLVSWNCLINGYKK 234
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
+G + A+ +YK M G PD VT L+ +G +N G + + + + ++
Sbjct: 235 IGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPL 294
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
+ L+ K + EAR + L++ IV + +I GY + G +D + + +ME
Sbjct: 295 VNALMDMFSKCGDIHEARRIFDNLEKRTIVS----WTTMISGYARCGLLDVSRKLFDDME 350
Query: 458 EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
EK D + +I G R DA+ +F +M + PDEIT + LS+C
Sbjct: 351 EK---DVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSAC 399
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 137/292 (46%), Gaps = 19/292 (6%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL---L 277
++N L+ G G+ ++A M S G PD VT L+ + +++R ++ +
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
KE GL+ P V + + S K + EA +FD ++ K ++ ++I G+ +
Sbjct: 284 KENGLRMTI-PLVNALMDMFS---KCGDIHEARRIFDNLE----KRTIVSWTTMISGYAR 335
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
G +D + ++ M DVV + ++I G + + L L+ EM T N T
Sbjct: 336 CGLLDVSRKLFDDME----EKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSNTKPDEIT 391
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
+S + L + R +++ + ++ ++D Y K GN+ EA ++ ++
Sbjct: 392 MIHCLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQ 451
Query: 458 EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
+ + T+T +I G + G A AI F +M+ G +PDEIT + +LS+C
Sbjct: 452 TR---NSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSAC 500
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 173/405 (42%), Gaps = 25/405 (6%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++N L+ + G A +Y M +G PD + LVSS +++ L+ KE
Sbjct: 224 SWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYV 283
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N +++ + + L+ + K + +A +F L + ++ ++ G G +
Sbjct: 284 KENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEKR----TIVSWTTMISGYARCGLL 339
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D + K + M D+V +N ++ G + K A L +E+ S P+ +
Sbjct: 340 DVSRKLFDDME----EKDVVLWNAMIGGSVQAKRGQDALALFQEMQ-TSNTKPDEITMIH 394
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+S +L + + +++ N SL+D + K GN+ AL + FHG
Sbjct: 395 CLSACSQLGALDVGIWIHRYIEKYSLSLNVALGTSLVDMYAKCGNISEALSV-----FHG 449
Query: 356 CPP-DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
+ +T+T++I G G + + ++EM I+ TF L+S C +Q
Sbjct: 450 IQTRNSLTYTAIIGGLALHGDASTAISYFNEMIDAGIAPDEITFIGLLSACCHGGMIQTG 509
Query: 415 RDLLRQLK-RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAG 473
RD Q+K R ++ PQ Y+ ++D ++G ++EA+ ++ M + D + L+ G
Sbjct: 510 RDYFSQMKSRFNLNPQLKHYSIMVDLLGRAGLLEEADRLMESM--PMEADAAVWGALLFG 567
Query: 474 HCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
M G K+L S I V L GM GEA
Sbjct: 568 CRMHGNVELGEKAAKKLLELDPSDSGIYV-------LLDGMYGEA 605
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 93/219 (42%), Gaps = 28/219 (12%)
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC---PPDVVTFTSLIE----------G 369
PN F++N I GF + N + +YK+ML HGC PD T+ L + G
Sbjct: 116 PNIFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLG 175
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
+ +G V L L E+ + +AS+H F+ ++ AR + + D+V
Sbjct: 176 HMILGHV---LKLRLELVSHVHNASIHMFA-------SCGDMENARKVFDESPVRDLVS- 224
Query: 430 PSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
+N +I+GY K G ++A + ME E KPD T L++ M G +
Sbjct: 225 ---WNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYE 281
Query: 489 KMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHE 527
+ G V L K G EA RI ++L +
Sbjct: 282 YVKENGLRMTIPLVNALMDMFSKCGDIHEARRIFDNLEK 320
>AT1G66345.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:24737719-24739353 FORWARD
LENGTH=544
Length = 544
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/510 (20%), Positives = 196/510 (38%), Gaps = 90/510 (17%)
Query: 36 LTYASCDKGSITKPEAWFVKIVSTLFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPI 95
+++S + K + + +S +++ +T + L+ SL+ ++ R NP
Sbjct: 32 FSFSSKTNPNPNKQQQILIDYISKSLQSNDTWETLSTKFSSIDLSDSLIETILLRFKNPE 91
Query: 96 LG---FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLL 152
FF ++ N+ H +Y + + L + L A+ L + + PDS L+
Sbjct: 92 TAKQALSFFHWSSHTRNLRHGIKSYALTIHILVKARLLIDARALIESSLLNSP-PDSDLV 150
Query: 153 GFLVSSFALVDRLDVSKELLAE--AQCNKVQVNAVVYDNL------LSVLV--------K 196
L+ ++ + + +LL + A+ +++ V+ L LSV+
Sbjct: 151 DSLLDTYEISSSTPLVFDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSS 210
Query: 197 HNKLDDAICLFRE-LMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
+K+DD + E + + T +++ LC G + E L+ + C P ++
Sbjct: 211 KSKIDDLVWRIYECAIDKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVI 270
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSK------------------------------ 285
+L+ + ++ + LLK + +K+
Sbjct: 271 VNTSLVFRVLEEMRIEESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEM 330
Query: 286 ----FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG-- 339
FS N YT + C+ +KEA L EM+ SG P TFN LI GF + G
Sbjct: 331 LQRGFSANSFVYTVFVRVCCEKGDVKEAERLLSEMEESGVSPYDETFNCLIGGFARFGWE 390
Query: 340 ---------------------------------NMDSALGIYKKMLFHGCPPDVVTFTSL 366
N++ A I K + G PD T++ L
Sbjct: 391 EKGLEYCEVMVTRGLMPSCSAFNEMVKSVSKIENVNRANEILTKSIDKGFVPDEHTYSHL 450
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
I G+ ++ L L++EM R +S F LI LC +++ L+ +K+ I
Sbjct: 451 IRGFIEGNDIDQALKLFYEMEYRKMSPGFEVFRSLIVGLCTCGKVEAGEKYLKIMKKRLI 510
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
P IY+ +I + K G+ A+ + EM
Sbjct: 511 EPNADIYDALIKAFQKIGDKTNADRVYNEM 540
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
+ ++ Y K+ ++ +F + G + T N+LI K D IY+ +
Sbjct: 167 FDLLVQCYAKIRYLELGFDVFKRLCDCGFTLSVITLNTLIHYSSKSKIDDLVWRIYECAI 226
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQ 412
P+ +T +I+ C+ G++ +DL + + S+ + L+ + + R++
Sbjct: 227 DKRIYPNEITIRIMIQVLCKEGRLKEVVDLLDRICGKRCLPSVIVNTSLVFRVLEEMRIE 286
Query: 413 EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTILI 471
E+ LL++L ++V Y+ V+ K G++ A + EM ++ + F +T+ +
Sbjct: 287 ESMSLLKRLLMKNMVVDTIGYSIVVYAKAKEGDLVSARKVFDEMLQRGFSANSFVYTVFV 346
Query: 472 AGHCMKGRAPDAIVIFYKMLATGCSP 497
C KG +A + +M +G SP
Sbjct: 347 RVCCEKGDVKEAERLLSEMEESGVSP 372
>AT3G02650.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:568135-569865 FORWARD
LENGTH=576
Length = 576
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 132/281 (46%), Gaps = 7/281 (2%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKF- 241
NA Y L L K + +D A + ++++S E ++ C G +EA+
Sbjct: 265 NAKTYYLTLEALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVY 324
Query: 242 -LNGMRSFGCSPDIVTYNTLLHGLCRIK-EVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
L + P V TL+ LC+ + A+++L ++ +++ ++ ++ VI
Sbjct: 325 ELAKTKEKSLPPRFVA--TLITALCKNDGTITFAQEMLGDLSGEAR-RRGIKPFSDVIHS 381
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
C++ +K+A +L +M G P FN ++ K G++D A + K M G PD
Sbjct: 382 LCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPD 441
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
V T+T +I GY + G ++ ++ E ++ S T+ LI CK EA LL
Sbjct: 442 VYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYDEALKLLN 501
Query: 420 QLKRTDIVPQPSIYNHVIDGYC-KSGNVDEANAIVVEMEEK 459
++ R + P YN +I +C K+ + ++A + EM++K
Sbjct: 502 EMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
Score = 85.9 bits (211), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 152/352 (43%), Gaps = 28/352 (7%)
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLF---RELMRSHS--HLETSTFNVLMGGLC 230
Q ++ V + ++LL + + DA L+ +E+ S L N L+
Sbjct: 183 QNEEITVTTSLVESLLVAIASDTRRMDAYGLWDLVKEIGEKESCGVLNLEILNELIALFG 242
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
G AF + FG +P+ TY L LC+ +D A + +++ LKS
Sbjct: 243 KLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLEALCKRSFMDWACSVCEKM-LKSGVLSEG 301
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTK--PNAFTFNSLIDGFVKVGNMDSALGIY 348
+I+ +CK K +EA S++ E+ ++ K P F +LI K D +
Sbjct: 302 EQMGNIITWFCKEGKAEEAYSVY-ELAKTKEKSLPPRFV-ATLITALCK---NDGTITFA 356
Query: 349 KKML--------FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
++ML G P F+ +I CR+ V L +M ++ + F++
Sbjct: 357 QEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNL 412
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC 460
++ K+ L EA+++L+ ++ + P Y +I GY K G +DEA I+ E ++K
Sbjct: 413 VVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKH 472
Query: 461 KP-DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSP--DEITVRILSSCL 509
K T+ LI G+C +A+ + +M G P DE I S CL
Sbjct: 473 KKLSPVTYHALIRGYCKIEEYDEALKLLNEMDRFGVQPNADEYNKLIQSFCL 524
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 114/254 (44%), Gaps = 11/254 (4%)
Query: 275 DLLKEVGLKSKFSP-NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
DL+KE+G K N+ +I+ + KL K K A +F + + G PNA T+ ++
Sbjct: 215 DLVKEIGEKESCGVLNLEILNELIALFGKLGKSKAAFDVFSKTEEFGFTPNAKTYYLTLE 274
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
K MD A + +KML G + ++I +C+ GK ++ T+ S
Sbjct: 275 ALCKRSFMDWACSVCEKMLKSGVLSEGEQMGNIITWFCKEGKAEEAYSVYELAKTKEKSL 334
Query: 394 SLHTFSVLISYLCKSNR----LQEA-RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
+ LI+ LCK++ QE DL + +R I P ++ VI C+ NV +
Sbjct: 335 PPRFVATLITALCKNDGTITFAQEMLGDLSGEARRRGIKP----FSDVIHSLCRMRNVKD 390
Query: 449 ANAIVVEMEEKC-KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSS 507
A A++++M K P F +++ G +A + M + G PD T ++ S
Sbjct: 391 AKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLMESRGLKPDVYTYTVIIS 450
Query: 508 CLLKSGMPGEAARI 521
K GM EA I
Sbjct: 451 GYAKGGMMDEAQEI 464
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 1/168 (0%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
++ ++ SLC+ AK L M G P + + +V + + LD +KE+L +
Sbjct: 375 FSDVIHSLCRMRNVKDAKALLLDMISKGPAPGNAVFNLVVHACSKTGDLDEAKEVLKLME 434
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
++ + Y ++S K +D+A + E + H L T++ L+ G C + D
Sbjct: 435 SRGLKPDVYTYTVIISGYAKGGMMDEAQEILAEAKKKHKKLSPVTYHALIRGYCKIEEYD 494
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLC-RIKEVDRARDLLKEVGLK 283
EA K LN M FG P+ YN L+ C + + ++A L +E+ K
Sbjct: 495 EALKLLNEMDRFGVQPNADEYNKLIQSFCLKALDWEKAEVLFEEMKQK 542
>AT5G13770.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:4445461-4447290 FORWARD
LENGTH=609
Length = 609
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 157/349 (44%), Gaps = 5/349 (1%)
Query: 98 FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVS 157
F+ F+ R S Y ++ SL + G A + + M+ G S L L+
Sbjct: 232 FQEFKSQRLSFLAKESGSIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIR 291
Query: 158 SFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL 217
+FA + ++++L EA K+ + + ++ + V+ ++ + + + ++ +
Sbjct: 292 AFAEAREVVITEKLFKEAGGKKLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKV 351
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
++ G EA K C VTY ++ CR+++ ++A L
Sbjct: 352 TDCILCAIVNGFSKQRGFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLF 411
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
E+ +K F V +Y+ ++ Y K ++ +A L +M + G KPN + +NSLID +
Sbjct: 412 DEM-VKKGFDKCVVAYSNIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGR 470
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHE--MNTRNISASL 395
++ A I+K+M PD V++TS+I Y R ++ ++L+ E MN I ++
Sbjct: 471 AMDLRRAEKIWKEMKRAKVLPDKVSYTSMISAYNRSKELERCVELYQEFRMNRGKIDRAM 530
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSG 444
+++ K++R+ E LL+ +K +Y+ ++ +G
Sbjct: 531 A--GIMVGVFSKTSRIDELMRLLQDMKVEGTRLDARLYSSALNALRDAG 577
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 113/256 (44%), Gaps = 2/256 (0%)
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
S + ++ L +G EA + L M+ G Y+ L+ +EV L KE
Sbjct: 249 SIYTIVCSSLAKSGRAFEALEVLEEMKDKGIPESSELYSMLIRAFAEAREVVITEKLFKE 308
Query: 280 VGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVG 339
G K K + V+ Y + M+ + M ++ K ++++GF K
Sbjct: 309 AGGK-KLLKDPEMCLKVVLMYVREGNMETTLEVVAAMRKAELKVTDCILCAIVNGFSKQR 367
Query: 340 NMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
A+ +Y+ + C VT+ I YCR+ K N L+ EM + + +S
Sbjct: 368 GFAEAVKVYEWAMKEECEAGQVTYAIAINAYCRLEKYNKAEMLFDEMVKKGFDKCVVAYS 427
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE- 458
++ K+ RL +A L+ ++K+ P IYN +ID + ++ ++ A I EM+
Sbjct: 428 NIMDMYGKTRRLSDAVRLMAKMKQRGCKPNIWIYNSLIDMHGRAMDLRRAEKIWKEMKRA 487
Query: 459 KCKPDKFTFTILIAGH 474
K PDK ++T +I+ +
Sbjct: 488 KVLPDKVSYTSMISAY 503
>AT3G14580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4903012-4904229 FORWARD
LENGTH=405
Length = 405
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 105/225 (46%), Gaps = 1/225 (0%)
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
AG ++ A + L GM FGC P ++N +L+ L K D + K +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAP-KLGVEIDAC 203
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+I G C+ ++ A L DE + ++PN TF+ LI GF G + A + ++M
Sbjct: 204 CLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERM 263
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
PD +TF LI G + G+V G+DL M + + T+ ++ L R
Sbjct: 264 EKERIEPDTITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRN 323
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
EA++++ Q+ + P Y ++ G C++ +V E + ++ +M
Sbjct: 324 LEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSVVEMDWVLRQM 368
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 110/233 (47%), Gaps = 2/233 (0%)
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
+ +FN ++ L SA DE K G D N L+ GLC ++ A LL
Sbjct: 167 SKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLD 226
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
E + K PNV +++ +I G+C K +EA L + M++ +P+ TFN LI G K
Sbjct: 227 EFP-QQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKK 285
Query: 339 GNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
G ++ + + ++M GC P+ T+ ++ G + ++ +M + + S ++
Sbjct: 286 GRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSY 345
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD-EAN 450
++ LC++ + E +LRQ+ VP+ ++ V+ N D +AN
Sbjct: 346 KKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDSQAN 398
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 138/336 (41%), Gaps = 40/336 (11%)
Query: 79 LTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHS------- 131
L P+ VL++ + +P +Q ++ + + Y +++ Q ++
Sbjct: 60 LAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVMR 119
Query: 132 ----------SAKLLYDCMRFDGKL--------------------PDSRLLGFLVSSFAL 161
S + Y+ MR G L P S+ F+++
Sbjct: 120 TIKLEKRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVS 179
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
D ++ A V+++A + L+ L + L+ A+ L E + S T
Sbjct: 180 AKLFDEIHKIFVSAPKLGVEIDACCLNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMT 239
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
F+ L+ G C+ G +EAFK L M PD +T+N L+ GL + V+ DLL+ +
Sbjct: 240 FSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILISGLRKKGRVEEGIDLLERMK 299
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+K PN +Y V+ G + EA + +M G +P+ ++ ++ G + ++
Sbjct: 300 VKG-CEPNPGTYQEVLYGLLDKKRNLEAKEMMSQMISWGMRPSFLSYKKMVLGLCETKSV 358
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVN 377
+ ++M+ HG P + + +++ C V K N
Sbjct: 359 VEMDWVLRQMVNHGFVPKTLMWWKVVQ--CVVSKNN 392
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 4/266 (1%)
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS-KMKEA 309
P Y +++ + K D ++++ + L+ + + + ++ Y L+ ++ A
Sbjct: 92 QPTESLYALMINKFGQAKMYDEIEEVMRTIKLEKRCRFSEEFFYNLMRIYGNLAGRINRA 151
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEG 369
+ M G P++ +FN +++ V D I+ G D LI+G
Sbjct: 152 IEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACCLNILIKG 211
Query: 370 YCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
C G + L L E + ++ TFS LI C + +EA LL ++++ I P
Sbjct: 212 LCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPD 271
Query: 430 PSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
+N +I G K G V+E ++ M+ K C+P+ T+ ++ G K R +A +
Sbjct: 272 TITFNILISGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMS 331
Query: 489 KMLATGCSPDEITVR--ILSSCLLKS 512
+M++ G P ++ + +L C KS
Sbjct: 332 QMISWGMRPSFLSYKKMVLGLCETKS 357
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 93/237 (39%), Gaps = 36/237 (15%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLD 166
KL V N+L++ LC+ G L+
Sbjct: 195 KLGVEIDACCLNILIKGLCESG-----------------------------------NLE 219
Query: 167 VSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLM 226
+ +LL E K + N + + L+ K ++A L + + +T TFN+L+
Sbjct: 220 AALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERMEKERIEPDTITFNILI 279
Query: 227 GGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKF 286
GL G V+E L M+ GC P+ TY +L+GL K A++++ ++ +
Sbjct: 280 SGLRKKGRVEEGIDLLERMKVKGCEPNPGTYQEVLYGLLDKKRNLEAKEMMSQM-ISWGM 338
Query: 287 SPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
P+ SY ++ G C+ + E + +M G P + ++ V N DS
Sbjct: 339 RPSFLSYKKMVLGLCETKSVVEMDWVLRQMVNHGFVPKTLMWWKVVQCVVSKNNDDS 395
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
Query: 373 VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
G++N +++ M S +F+ +++ L + E + + +
Sbjct: 145 AGRINRAIEILFGMPDFGCWPSSKSFNFILNLLVSAKLFDEIHKIFVSAPKLGVEIDACC 204
Query: 433 YNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKML 491
N +I G C+SGN++ A ++ E ++K +P+ TF+ LI G C KG+ +A + +M
Sbjct: 205 LNILIKGLCESGNLEAALQLLDEFPQQKSRPNVMTFSPLIRGFCNKGKFEEAFKLLERME 264
Query: 492 ATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
PD IT IL S L K G E + E +
Sbjct: 265 KERIEPDTITFNILISGLRKKGRVEEGIDLLERM 298
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 113/460 (24%), Positives = 198/460 (43%), Gaps = 95/460 (20%)
Query: 107 KLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDR-- 164
KL H F +L R+L H+S K D F+ P+ G +V +R
Sbjct: 8 KLTTLHGF----ILKRNL--SSFHASLKRFSDKKFFN---PNHEDGGVVVERLCRANRFG 58
Query: 165 --LDV--SKELLAEAQCNKVQV-------NAVVYDNLLSVLVKHNKLDDAICLFRELMRS 213
+DV ++LL EA VQ+ A Y NL+ V + L++ +
Sbjct: 59 EAIDVLCGQKLLREA----VQLLGRAKKPPASTYCNLIQVCSQTRALEEG-------KKV 107
Query: 214 HSHLETSTF-------NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR 266
H H+ TS F N L+ G + +A K + M + D+ ++N +++G
Sbjct: 108 HEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEMPN----RDLCSWNVMVNGYAE 163
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR-SGTKPNA 325
+ ++ AR L E+ K +S +T +++GY K + +EA L+ M R ++PN
Sbjct: 164 VGLLEEARKLFDEMTEKDSYS-----WTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNI 218
Query: 326 FT-----------------------------------FNSLIDGFVKVGNMDSALGIYKK 350
FT ++SL+D + K G +D A I+ K
Sbjct: 219 FTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDK 278
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
++ DVV++TS+I+ Y + + G L+ E+ + +TF+ +++
Sbjct: 279 IV----EKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKC-KPDKFTFTI 469
+ + + + R P + ++D Y K GN++ A +V + C KPD ++T
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVV----DGCPKPDLVSWTS 390
Query: 470 LIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
LI G G+ +A+ F +L +G PD +T V +LS+C
Sbjct: 391 LIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSAC 430
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/450 (18%), Positives = 183/450 (40%), Gaps = 88/450 (19%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF--LVSSFALVDRLDVSKELLAE 174
+N LLR + G A+ ++D ++P+ L + +V+ +A V L+ +++L E
Sbjct: 123 WNRLLRMYAKCGSLVDARKVFD------EMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE 176
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR-SHSHLETSTFNVLMGGLCSAG 233
+ ++ + +++ VK ++ ++A+ L+ + R +S T ++ + +
Sbjct: 177 M----TEKDSYSWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVK 232
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
+ + + G D V +++L+ + +D AR++ ++ K +V S+
Sbjct: 233 CIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEK-----DVVSW 287
Query: 294 TTVISGYCKLSKMKEASSLFDE-----------------------------------MDR 318
T++I Y K S+ +E SLF E M R
Sbjct: 288 TSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTTEELGKQVHGYMTR 347
Query: 319 SGTKPNAFTFNSLIDGFVKVGNM-------------------------------DSALGI 347
G P +F +SL+D + K GN+ D AL
Sbjct: 348 VGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKY 407
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN-ISASLHTFSVLISYLC 406
+ +L G PD VTF +++ G V GL+ ++ + ++ +S + ++ L+ L
Sbjct: 408 FDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLA 467
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFT 466
+S R ++ + ++ ++ + P ++ V+ G GN+D A E+ + + T
Sbjct: 468 RSGRFEQLKSVISEMP---MKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVT 524
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLATGCS 496
+ + + G+ + + +M G +
Sbjct: 525 YVTMANIYAAAGKWEEEGKMRKRMQEIGVT 554
>AT1G61870.1 | Symbols: PPR336 | pentatricopeptide repeat 336 |
chr1:22865326-22866552 REVERSE LENGTH=408
Length = 408
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 113/266 (42%), Gaps = 2/266 (0%)
Query: 195 VKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK-FLNGMRSFGCSPD 253
+ N LD ++ +FR+L + + N L+ A D EA + ++ + +G PD
Sbjct: 127 AQANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPD 186
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
+ TYN ++ C + ++ E+ K PN S+ +ISG+ K E +
Sbjct: 187 LETYNRMIKVFCESGSASSSYSIVAEMERKG-IKPNSSSFGLMISGFYAEDKSDEVGKVL 245
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
M G T+N I K A + ML G P+ VT++ LI G+C
Sbjct: 246 AMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNE 305
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY 433
L+ M R + LI YLCK + A L ++ + VP SI
Sbjct: 306 DDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIM 365
Query: 434 NHVIDGYCKSGNVDEANAIVVEMEEK 459
+++G K V+EA ++ +++EK
Sbjct: 366 KSLVNGLAKDSKVEEAKELIGQVKEK 391
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 1/213 (0%)
Query: 110 VHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSK 169
+ TYN +++ C+ G SS+ + M G P+S G ++S F D+ D
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
++LA + V + Y+ + L K K +A L ++ + T T++ L+ G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGF 302
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
C+ D +EA K M + GC PD Y TL++ LC+ + + A L KE ++ + P+
Sbjct: 303 CNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKE-SMEKNWVPS 361
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
++++G K SK++EA L ++ T+
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTR 394
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 4/215 (1%)
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
++ + Y+ ++ V + + + E+ R +S+F +++ G + DE
Sbjct: 183 IEPDLETYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVG 242
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
K L M+ G + + TYN + LC+ K+ A+ LL + L + PN +Y+ +I G
Sbjct: 243 KVLAMMKDRGVNIGVSTYNIRIQSLCKRKKSKEAKALLDGM-LSAGMKPNTVTYSHLIHG 301
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+C +EA LF M G KP++ + +LI K G+ ++AL + K+ + P
Sbjct: 302 FCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPS 361
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMN---TRNI 391
SL+ G + KV +L ++ TRN+
Sbjct: 362 FSIMKSLVNGLAKDSKVEEAKELIGQVKEKFTRNV 396
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 119/302 (39%), Gaps = 40/302 (13%)
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
A +D + + + F S + + N LL K+ A+ + E+ P++
Sbjct: 129 ANMLDHSLRVFRDLEKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLE 188
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
+Y +I +C+ + S+ EM+R G KPN+ +F +I GF D
Sbjct: 189 TYNRMIKVFCESGSASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSD--------- 239
Query: 352 LFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRL 411
VGKV M R ++ + T+++ I LCK +
Sbjct: 240 --------------------EVGKV------LAMMKDRGVNIGVSTYNIRIQSLCKRKKS 273
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTIL 470
+EA+ LL + + P Y+H+I G+C + +EA + M + CKPD + L
Sbjct: 274 KEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTL 333
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA----ARIKESLH 526
I C G A+ + + + P ++ L + L K EA ++KE
Sbjct: 334 IYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKELIGQVKEKFT 393
Query: 527 EN 528
N
Sbjct: 394 RN 395
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 2/240 (0%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCM-RFDGKLPDSRLLGFLVSSFALVDR 164
EK + + + N LL + + AK +Y M + G PD ++ F
Sbjct: 143 EKFEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGS 202
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
S ++AE + ++ N+ + ++S +K D+ + + ++ ST+N+
Sbjct: 203 ASSSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNI 262
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
+ LC EA L+GM S G P+ VTY+ L+HG C + + A+ L K + +
Sbjct: 263 RIQSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFK-IMVNR 321
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
P+ Y T+I CK + A SL E P+ SL++G K ++ A
Sbjct: 322 GCKPDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEA 381
>AT1G63630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23587613-23588220 FORWARD
LENGTH=152
Length = 152
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 80/136 (58%)
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
P T+NS+IDGF K +D A + M GC PDVVTF++LI GYC+ +V+ G+++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEI 67
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
+ EM+ R I A+ T++ LI C+ L A+DLL ++ + P ++ ++ G C
Sbjct: 68 FCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCS 127
Query: 443 SGNVDEANAIVVEMEE 458
+ +A AI+ ++++
Sbjct: 128 KKELRKAFAILEDLQK 143
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
P +TYN+++ G C+ VD A+ +L + K SP+V +++T+I+GYCK ++
Sbjct: 8 PTTITYNSMIDGFCKQDRVDDAKRMLDSMASKG-CSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+F EM R G N T+ +LI GF +VG++D+A + +M+ G PD +TF ++ G C
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 83/144 (57%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
L+ P +Y ++I G+CK ++ +A + D M G P+ TF++LI+G+ K +
Sbjct: 2 LRWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRV 61
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
D+ + I+ +M G + VT+T+LI G+C+VG ++ DL +EM + ++ TF +
Sbjct: 62 DNGMEIFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCM 121
Query: 402 ISYLCKSNRLQEARDLLRQLKRTD 425
++ LC L++A +L L++++
Sbjct: 122 LAGLCSKKELRKAFAILEDLQKSE 145
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 74/133 (55%), Gaps = 1/133 (0%)
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLK 278
T T+N ++ G C VD+A + L+ M S GCSPD+VT++TL++G C+ K VD ++
Sbjct: 10 TITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFC 69
Query: 279 EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKV 338
E+ + N +YTT+I G+C++ + A L +EM G P+ TF+ ++ G
Sbjct: 70 EMH-RRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSK 128
Query: 339 GNMDSALGIYKKM 351
+ A I + +
Sbjct: 129 KELRKAFAILEDL 141
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 74/135 (54%), Gaps = 1/135 (0%)
Query: 185 VVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNG 244
+ Y++++ K +++DDA + + + TF+ L+ G C A VD +
Sbjct: 11 ITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCE 70
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M G + VTY TL+HG C++ ++D A+DLL E+ + +P+ ++ +++G C
Sbjct: 71 MHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEM-ISCGVAPDYITFHCMLAGLCSKK 129
Query: 305 KMKEASSLFDEMDRS 319
++++A ++ +++ +S
Sbjct: 130 ELRKAFAILEDLQKS 144
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%)
Query: 146 LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC 205
P + ++ F DR+D +K +L + V + L++ K ++D+ +
Sbjct: 7 FPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGME 66
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
+F E+ R T T+ L+ G C GD+D A LN M S G +PD +T++ +L GLC
Sbjct: 67 IFCEMHRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLC 126
Query: 266 RIKEVDRARDLLKEV 280
KE+ +A +L+++
Sbjct: 127 SKKELRKAFAILEDL 141
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 1/139 (0%)
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
T++ +I CK +R+ +A+ +L + P ++ +I+GYCK+ VD I EM
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 457 EEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMP 515
+ + T+T LI G C G A + +M++ G +PD IT + + L
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 516 GEAARIKESLHENQGDSLK 534
+A I E L +++ L+
Sbjct: 132 RKAFAILEDLQKSEDHHLE 150
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Query: 423 RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAP 481
R I P YN +IDG+CK VD+A ++ M K C PD TF+ LI G+C R
Sbjct: 3 RWSIFPTTITYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVD 62
Query: 482 DAIVIFYKMLATGCSPDEITVRIL 505
+ + IF +M G + +T L
Sbjct: 63 NGMEIFCEMHRRGIVANTVTYTTL 86
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 58/131 (44%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN ++ C++ AK + D M G PD L++ + R+D E+ E
Sbjct: 12 TYNSMIDGFCKQDRVDDAKRMLDSMASKGCSPDVVTFSTLINGYCKAKRVDNGMEIFCEM 71
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N V Y L+ + LD A L E++ + TF+ ++ GLCS ++
Sbjct: 72 HRRGIVANTVTYTTLIHGFCQVGDLDAAQDLLNEMISCGVAPDYITFHCMLAGLCSKKEL 131
Query: 236 DEAFKFLNGMR 246
+AF L ++
Sbjct: 132 RKAFAILEDLQ 142
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 99.0 bits (245), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 161/394 (40%), Gaps = 45/394 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N +L CQ G A L+ MR + PDS + L+ S + L + + + A
Sbjct: 120 TWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVG 179
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V V V + +S K LD A +F + R + ++N + G+
Sbjct: 180 IRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAIDRGDRTV--VSWNSMFKAYSVFGEA 237
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+AF M PD+ T+ L C+ E L+ + ++ + T
Sbjct: 238 FDAFGLYCLMLREEFKPDLSTFINLAAS-CQNPETLTQGRLIHSHAIHLGTDQDIEAINT 296
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
IS Y K A LFD M T ++ +I G+ + G+MD AL ++ M+ G
Sbjct: 297 FISMYSKSEDTCSARLLFDIM----TSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSG 352
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD+VT SLI G + G + G + +AR
Sbjct: 353 EKPDLVTLLSLISGCGKFGSLETG------------------------------KWIDAR 382
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHC 475
+ KR +++ I N +ID Y K G++ EA I EK T+T +IAG+
Sbjct: 383 ADIYGCKRDNVM----ICNALIDMYSKCGSIHEARDIFDNTPEKT---VVTWTTMIAGYA 435
Query: 476 MKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
+ G +A+ +F KM+ P+ IT + +L +C
Sbjct: 436 LNGIFLEALKLFSKMIDLDYKPNHITFLAVLQAC 469
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 157/394 (39%), Gaps = 24/394 (6%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N+ +R + + LL+ M+ G P++ F+ + A + + + + A
Sbjct: 19 AWNLQIREAVNRNDPVESLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHL 78
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + V + + VK N +D A +F + + +T+N ++ G C +G
Sbjct: 79 IKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERM----PERDATTWNAMLSGFCQSGHT 134
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D+AF MR +PD VT TL+ K + + + + VG++ V T
Sbjct: 135 DKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSL-KLLEAMHAVGIRLGVDVQVTVANT 193
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
IS Y K + A +F+ +DR ++NS+ + G A G+Y ML
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRG--DRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREE 251
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD+ TF +L + G + + + IS KS AR
Sbjct: 252 FKPDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSAR 311
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGH 474
L + V + +I GY + G++DEA A+ M + KPD T LI+G
Sbjct: 312 LLFDIMTSRTCVS----WTVMISGYAEKGDMDEALALFHAMIKSGEKPDLVTLLSLISG- 366
Query: 475 CMK------GRAPDAIVIFYKMLATGCSPDEITV 502
C K G+ DA Y GC D + +
Sbjct: 367 CGKFGSLETGKWIDARADIY-----GCKRDNVMI 395
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 157/368 (42%), Gaps = 40/368 (10%)
Query: 80 TPSLVLEVVKRLNNPILG----FKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKL 135
+ LV E + R + ++ FK + E + +F Y ++LR + L + L
Sbjct: 206 SAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFD---AFGLYCLMLREEFKPDLSTFINL 262
Query: 136 LYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLV 195
C P++ G L+ S A+ L +++ A + +S+
Sbjct: 263 AASCQN-----PETLTQGRLIHSHAI--HLGTDQDIEA-------------INTFISMYS 302
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
K A LF ++M S + + ++ V++ G GD+DEA + M G PD+V
Sbjct: 303 KSEDTCSARLLF-DIMTSRTCV---SWTVMISGYAEKGDMDEALALFHAMIKSGEKPDLV 358
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
T +L+ G + ++ + + + NV +I Y K + EA +FD
Sbjct: 359 TLLSLISGCGKFGSLETGKWIDARADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFD- 417
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
+ + T+ ++I G+ G AL ++ KM+ P+ +TF ++++ G
Sbjct: 418 ---NTPEKTVVTWTTMIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGS 474
Query: 376 VNYGLDLWHEM-NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
+ G + +H M NIS L +S ++ L + +L+EA +L+R + P I+
Sbjct: 475 LEKGWEYFHIMKQVYNISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAK---PDAGIWG 531
Query: 435 HVIDGYCK 442
+++ CK
Sbjct: 532 ALLNA-CK 538
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/430 (20%), Positives = 188/430 (43%), Gaps = 49/430 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N L+ Q G + A L+ MR G P + +S+ A + ++ K+ A A
Sbjct: 241 AWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIA 300
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N ++++ ++ +LL+ K ++ A +F + + T+N+++ G G V
Sbjct: 301 IVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRMFEK----DVVTWNLIISGYVQQGLV 356
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++A MR D VT TL+ R + + +++ + ++ F ++ +T
Sbjct: 357 EDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEV-QCYCIRHSFESDIVLAST 415
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
V+ Y K + +A +FD S + + +N+L+ + + G AL ++ M G
Sbjct: 416 VMDMYAKCGSIVDAKKVFD----STVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEG 471
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PP+V+T+ +I R G+V+ D++ +M + I +L +++ +++ + ++ +EA
Sbjct: 472 VPPNVITWNLIILSLLRNGQVDEAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAI 531
Query: 416 DLLRQLKRTDIVPQP------------------------------------SIYNHVIDG 439
LR+++ + + P SI ++D
Sbjct: 532 LFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDM 591
Query: 440 YCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
Y K G++++A + K + +I+ + + G +AI ++ + G PD
Sbjct: 592 YAKCGDINKAEKV---FGSKLYSELPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDN 648
Query: 500 ITV-RILSSC 508
IT+ +LS+C
Sbjct: 649 ITITNVLSAC 658
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/466 (21%), Positives = 206/466 (44%), Gaps = 41/466 (8%)
Query: 1 MLSFLHGITNLMTLSLFTRIQASKIALARCFTLTQLTYASCDKGSITK-PEAWFVKIVST 59
M+ ++ N + LF+ ++ + R T L+ AS + G + + ++ + IV+
Sbjct: 246 MVGYVQNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLS-ASANMGGVEEGKQSHAIAIVNG 304
Query: 60 LFLHSNSLDTRVLSYFGKHLTPSLVLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNM 119
+ L N L T +L+++ K V R+ F ++ + T+N+
Sbjct: 305 MEL-DNILGTSLLNFYCKVGLIEYAEMVFDRM-----------FEKDVV-------TWNL 345
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
++ Q+GL A + MR + D L L+S+ A + L + KE+ +
Sbjct: 346 IISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHS 405
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
+ + V+ ++ + K + DA +++ S + +N L+ +G EA
Sbjct: 406 FESDIVLASTVMDMYAKCGSIVDA----KKVFDSTVEKDLILWNTLLAAYAESGLSGEAL 461
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ GM+ G P+++T+N ++ L R +VD A+D+ ++ S PN+ S+TT+++G
Sbjct: 462 RLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEAKDMFLQMQ-SSGIIPNLISWTTMMNG 520
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
+ +EA +M SG +PNAF+ + + ++ I+ ++ +
Sbjct: 521 MVQNGCSEEAILFLRKMQESGLRPNAFSITVALSACAHLASLHIGRTIHGYIIRNLQHSS 580
Query: 360 VVTF-TSLIEGYCRVGKVN-----YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
+V+ TSL++ Y + G +N +G L+ E+ N +IS L+E
Sbjct: 581 LVSIETSLVDMYAKCGDINKAEKVFGSKLYSELPLSN---------AMISAYALYGNLKE 631
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
A L R L+ + P +V+ +G++++A I ++ K
Sbjct: 632 AIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFTDIVSK 677
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/411 (21%), Positives = 176/411 (42%), Gaps = 75/411 (18%)
Query: 155 LVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH 214
LV +A D L++++ L ++ + N + ++ V + + A+ F E+
Sbjct: 113 LVIFYAKCDALEIAEVLFSKLRVR----NVFSWAAIIGVKCRIGLCEGALMGFVEM---- 164
Query: 215 SHLETSTF--NVLMGGLCSAGDVDEAFKFLNGMRSF----GCSPDIVTYNTL--LHGLCR 266
LE F N ++ +C A + +F G+ + G + ++L ++G C
Sbjct: 165 --LENEIFPDNFVVPNVCKACGALKWSRFGRGVHGYVVKSGLEDCVFVASSLADMYGKCG 222
Query: 267 IKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAF 326
+ +D A + E+ + N ++ ++ GY + K +EA LF +M + G +P
Sbjct: 223 V--LDDASKVFDEIPDR-----NAVAWNALMVGYVQNGKNEEAIRLFSDMRKQGVEPTRV 275
Query: 327 TFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM 386
T ++ + +G ++ + + +G D + TSL+ YC+VG + Y ++ M
Sbjct: 276 TVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGTSLLNFYCKVGLIEYAEMVFDRM 335
Query: 387 NTRNISASLHTFSVLIS------------YLCKSNRLQEAR-------DLLRQLKRT--- 424
+++ T++++IS Y+C+ RL++ + L+ RT
Sbjct: 336 FEKDVV----TWNLIISGYVQQGLVEDAIYMCQLMRLEKLKYDCVTLATLMSAAARTENL 391
Query: 425 -----------------DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTF 467
DIV + + V+D Y K G++ +A + EK D +
Sbjct: 392 KLGKEVQCYCIRHSFESDIV----LASTVMDMYAKCGSIVDAKKVFDSTVEK---DLILW 444
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
L+A + G + +A+ +FY M G P+ IT ++ LL++G EA
Sbjct: 445 NTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVDEA 495
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/343 (22%), Positives = 156/343 (45%), Gaps = 32/343 (9%)
Query: 187 YDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR 246
Y+ +LS V++ + A F + + +++N ++ G G++++A + M
Sbjct: 127 YNIMLSCYVRNVNFEKAQSFFDRM----PFKDAASWNTMITGYARRGEMEKARELFYSM- 181
Query: 247 SFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKM 306
+ V++N ++ G ++++A K ++ V ++T +I+GY K K+
Sbjct: 182 ---MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG-----VVAWTAMITGYMKAKKV 233
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
+ A ++F +M N T+N++I G+V+ + L +++ ML G P+ +S
Sbjct: 234 ELAEAMFKDMT---VNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSA 290
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI 426
+ G + + G + ++ + + + LIS CK L +A L +K+ D+
Sbjct: 291 LLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDV 350
Query: 427 VPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIV 485
V +N +I GY + GN D+A + EM + K +PD TF ++ G +
Sbjct: 351 VA----WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMA 406
Query: 486 IFYKML---ATGCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
F M+ PD T C++ + G A +++E+L
Sbjct: 407 YFESMVRDYKVEPQPDHYT------CMVD--LLGRAGKLEEAL 441
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 162/378 (42%), Gaps = 87/378 (23%)
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCR-IKEVDRARDLLKEV 280
N ++ +GD+D A + +GMR+ + +T+N+LL G+ + + A L E+
Sbjct: 64 LNKIIARCVRSGDIDGALRVFHGMRA----KNTITWNSLLIGISKDPSRMMEAHQLFDEI 119
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMD---------------RSGT---- 321
P+ SY ++S Y + ++A S FD M R G
Sbjct: 120 P-----EPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYARRGEMEKA 174
Query: 322 --------KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
+ N ++N++I G+++ G+++ A +K G VV +T++I GY +
Sbjct: 175 RELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRG----VVAWTAMITGYMKA 230
Query: 374 GKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR-------------- 419
KV ++ +M ++ +L T++ +IS +++R ++ L R
Sbjct: 231 KKVELAEAMFKDM---TVNKNLVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGL 287
Query: 420 -------------QLKRT--DIVPQPSIYNHV------IDGYCKSGNVDEANAIVVEMEE 458
QL R IV + ++ N V I YCK G + +A + M++
Sbjct: 288 SSALLGCSELSALQLGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKK 347
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC----LLKSG 513
K D + +I+G+ G A A+ +F +M+ PD IT V +L +C L+ G
Sbjct: 348 K---DVVAWNAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIG 404
Query: 514 MPGEAARIKESLHENQGD 531
M + +++ E Q D
Sbjct: 405 MAYFESMVRDYKVEPQPD 422
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 160/387 (41%), Gaps = 76/387 (19%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL-AE 174
+YN++L + A+ +D M F D+ +++ +A ++ ++EL +
Sbjct: 126 SYNIMLSCYVRNVNFEKAQSFFDRMPFK----DAASWNTMITGYARRGEMEKARELFYSM 181
Query: 175 AQCNKVQVNA--------------------------VVYDNLLSVLVKHNKLDDAICLFR 208
+ N+V NA V + +++ +K K++ A +F+
Sbjct: 182 MEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFK 241
Query: 209 ELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIK 268
++ + + + T+N ++ G ++ K M G P+ ++ L G +
Sbjct: 242 DMTVNKNLV---TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELS 298
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
+ R + + V KS +V + T++IS YCK ++ +A LF+ M K + +
Sbjct: 299 ALQLGRQIHQIVS-KSTLCNDVTALTSLISMYCKCGELGDAWKLFEVM----KKKDVVAW 353
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N++I G+ + GN D AL ++++M+ + PD +TF +++ G VN G+ + M
Sbjct: 354 NAMISGYAQHGNADKALCLFREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESM-- 411
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
RD + PQP Y ++D ++G ++E
Sbjct: 412 -------------------------VRDY-------KVEPQPDHYTCMVDLLGRAGKLEE 439
Query: 449 ANAIVVEMEEKCKPDKFTFTILIAGHC 475
A ++ M +P F L+ G C
Sbjct: 440 ALKLIRSM--PFRPHAAVFGTLL-GAC 463
>AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18256086-18257975 FORWARD
LENGTH=629
Length = 629
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 149/342 (43%), Gaps = 22/342 (6%)
Query: 220 STFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE 279
+TF +L+ GL S ++++A + M G D V Y+ L+ G + + D L +E
Sbjct: 202 ATFRILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQE 261
Query: 280 VGLK-SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM--DRSGTKPNAFTFNSLIDGFV 336
+ K F + Y ++ GY KEA ++E + S + +A +N +++
Sbjct: 262 LKEKLGGFVDDGVVYGQLMKGYFMKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALS 321
Query: 337 KVGNMDSALGIYKKMLFHGCPP-----DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNI 391
+ G D AL ++ + PP ++ TF ++ GYC GK ++++ +M
Sbjct: 322 ENGKFDEALKLFDAVKKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKC 381
Query: 392 SASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANA 451
S +F+ L++ LC + L EA L +++ ++ P Y ++D K G +DE A
Sbjct: 382 SPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAA 441
Query: 452 IVVEM-EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLL 510
M E +P+ + L G+ DA F+ M+ + D+ + + L
Sbjct: 442 YYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKS-FFDMMVSKLKMDDEAYKFIMRALS 500
Query: 511 KSG------------MPGEAARIKESLHENQGDSLKKSYYEG 540
++G + + R+ E L E + L+K EG
Sbjct: 501 EAGRLDEMLKIVDEMLDDDTVRVSEELQEFVKEELRKGGREG 542
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/336 (20%), Positives = 142/336 (42%), Gaps = 10/336 (2%)
Query: 194 LVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPD 253
L++ N L++A R + S+ T N ++ + + G +P+
Sbjct: 105 LIRENDLEEAALYTRHSVYSNCRPTIFTVNTVLAAQLRQAKYGALLQLHGFINQAGIAPN 164
Query: 254 IVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
I+TYN + +++ + A + K + +P++ ++ ++ G +++A +
Sbjct: 165 IITYNLIFQAYLDVRKPEIALEHYKLFIDNAPLNPSIATFRILVKGLVSNDNLEKAMEIK 224
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK--KMLFHGCPPDVVTFTSLIEGYC 371
++M G + ++ L+ G VK + D L +Y+ K G D V + L++GY
Sbjct: 225 EDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEKLGGFVDDGVVYGQLMKGYF 284
Query: 372 RVGKVNYGLDLWHEMNTRN--ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQ 429
++ + E N + S ++ ++ L ++ + EA L +K+ P+
Sbjct: 285 MKEMEKEAMECYEEAVGENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPPR 344
Query: 430 P-----SIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDA 483
+N +++GYC G +EA + +M + KC PD +F L+ C +A
Sbjct: 345 HLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNLMNQLCDNELLAEA 404
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAA 519
++ +M PDE T +L K G E A
Sbjct: 405 EKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGA 440
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 136/319 (42%), Gaps = 25/319 (7%)
Query: 154 FLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRS 213
LV D L+ + E+ + V+ VVY L+ VK++ D + L++EL
Sbjct: 206 ILVKGLVSNDNLEKAMEIKEDMAVKGFVVDPVVYSYLMMGCVKNSDADGVLKLYQELKEK 265
Query: 214 HSHL--ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDI----VTYNTLLHGLCRI 267
+ + LM G EA + + G + + + YN +L L
Sbjct: 266 LGGFVDDGVVYGQLMKGYFMKEMEKEAMECYE--EAVGENSKVRMSAMAYNYVLEALSEN 323
Query: 268 KEVDRARDLLKEVGLKSKFSP------NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
+ D A L V K + +P N+ ++ +++GYC K +EA +F +M
Sbjct: 324 GKFDEALKLFDAV--KKEHNPPRHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKC 381
Query: 322 KPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLD 381
P+ +FN+L++ + A +Y +M PD T+ L++ + GK++ G
Sbjct: 382 SPDTLSFNNLMNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAA 441
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD----LLRQLKRTDIVPQPSIYNHVI 437
+ M N+ +L ++ L L K+ +L +A+ ++ +LK D Y ++
Sbjct: 442 YYKTMVESNLRPNLAVYNRLQDQLIKAGKLDDAKSFFDMMVSKLKMDD-----EAYKFIM 496
Query: 438 DGYCKSGNVDEANAIVVEM 456
++G +DE IV EM
Sbjct: 497 RALSEAGRLDEMLKIVDEM 515
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 32/247 (12%)
Query: 106 EKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRL 165
E V S YN +L +L + G A L+D ++ + P
Sbjct: 302 ENSKVRMSAMAYNYVLEALSENGKFDEALKLFDAVKKEHNPP------------------ 343
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVL 225
+ VN ++ +++ K ++A+ +FR++ +T +FN L
Sbjct: 344 ------------RHLAVNLGTFNVMVNGYCAGGKFEEAMEVFRQMGDFKCSPDTLSFNNL 391
Query: 226 MGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK 285
M LC + EA K M PD TY L+ + ++D K + ++S
Sbjct: 392 MNQLCDNELLAEAEKLYGEMEEKNVKPDEYTYGLLMDTCFKEGKIDEGAAYYKTM-VESN 450
Query: 286 FSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL 345
PN+ Y + K K+ +A S FD M S K + + ++ + G +D L
Sbjct: 451 LRPNLAVYNRLQDQLIKAGKLDDAKSFFDMM-VSKLKMDDEAYKFIMRALSEAGRLDEML 509
Query: 346 GIYKKML 352
I +ML
Sbjct: 510 KIVDEML 516
>AT5G61370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24672008-24673471 REVERSE
LENGTH=487
Length = 487
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 18/361 (4%)
Query: 84 VLEVVKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFD 143
V+E K +P +FF ++ + L +N +LR L +K H++ ++L +R +
Sbjct: 73 VIESCKNETSPRRLLRFFSWSCKSLGSSLHDKEFNYVLRVLAEKKDHTAMQILLSDLRKE 132
Query: 144 GKLPDSRLLGFLVSSFALV----DRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
+ D + + + V D + + K +L + C + + ++S L
Sbjct: 133 NRAMDKQTFSIVAETLVKVGKEEDAIGIFK-ILDKFSCPQ---DGFTVTAIISALCSRGH 188
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
+ A+ + S E S + L+ G +V EA + + M+S G +PD+ +N+
Sbjct: 189 VKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNS 248
Query: 260 LLHGLCRIKEVDR--------ARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
LL LC + V+R A +++ E+ K P SY ++S + +++E+
Sbjct: 249 LLTCLCE-RNVNRNPSGLVPEALNIMLEMR-SYKIQPTSMSYNILLSCLGRTRRVRESCQ 306
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+ ++M RSG P+ ++ ++ G I +M+ G P+ + LI C
Sbjct: 307 ILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYDLIGVLC 366
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
V +VN+ L L+ +M ++ + +LI LCK ++ R+L + D+ S
Sbjct: 367 GVERVNFALQLFEKMKRSSVGGYGQVYDLLIPKLCKGGNFEKGRELWEEALSIDVTLSCS 426
Query: 432 I 432
I
Sbjct: 427 I 427
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 105/236 (44%), Gaps = 8/236 (3%)
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
L ++ + + TF+ + + VKVG + A+GI+K + CP D T T++I C
Sbjct: 125 LLSDLRKENRAMDKQTFSIVAETLVKVGKEEDAIGIFKILDKFSCPQDGFTVTAIISALC 184
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
G V L + H L + L+ ++EAR +++ +K I P
Sbjct: 185 SRGHVKRALGVMHHHKDVISGNELSVYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLF 244
Query: 432 IYNHVIDGYCK-------SGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDA 483
+N ++ C+ SG V EA I++EM K +P ++ IL++ R ++
Sbjct: 245 CFNSLLTCLCERNVNRNPSGLVPEALNIMLEMRSYKIQPTSMSYNILLSCLGRTRRVRES 304
Query: 484 IVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYYE 539
I +M +GC PD + + L +G G+ +I + + E +K YY+
Sbjct: 305 CQILEQMKRSGCDPDTGSYYFVVRVLYLTGRFGKGNQIVDEMIERGFRPERKFYYD 360
>AT1G71210.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:26838850-26841489 REVERSE
LENGTH=879
Length = 879
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 118/503 (23%), Positives = 190/503 (37%), Gaps = 45/503 (8%)
Query: 55 KIVSTLFLHSNSLDTRV----LSYFGKHLTPSLVLEVVKRLNNPILG-FKFFQFTREKLN 109
+I L SN D R LS LT VL+V+ IL KFF + +
Sbjct: 82 RIFDILRAPSNDGDDRAFYLHLSNLRLRLTEKFVLDVLSHTRYDILCCLKFFDWAARQPG 141
Query: 110 VHHSFWTYNMLLRSLCQKGLHS-SAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
HH+ T++ + + L L + L + F+ RL LV +A+ R D++
Sbjct: 142 FHHTRATFHAIFKILRGAKLVTLMIDFLDRSVGFESCRHSLRLCDALVVGYAVAGRTDIA 201
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLV--------------------------------- 195
+ + + +++ Y LL+ LV
Sbjct: 202 LQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIFDQISVRGFVCAVTHSILVKKF 261
Query: 196 -KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDI 254
K KLD+A R L+ + S +L+ LCS EA K L+ ++ G
Sbjct: 262 CKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALCSKRKFQEATKLLDEIKLVGTVNMD 321
Query: 255 VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFD 314
YN + L + ++ D L+++ V Y +++ K + + +
Sbjct: 322 RAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILT 381
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
EM G PN T N+ + F K G +D AL +Y+ G P +++ LI C
Sbjct: 382 EMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRSRSEIGFAPTAMSYNYLIHTLCANE 441
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
V D+ R TFS L + LC + AR+L+ D++P+
Sbjct: 442 SVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRIAGC 501
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEKCKPDKF--TFTILIAGHCMKGRAPDAIVIFYKMLA 492
+I C G V++A ++ E+ K D FT LI G R A + +M
Sbjct: 502 KIISALCDVGKVEDA-LMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRMQE 560
Query: 493 TGCSPDEITVR--ILSSCLLKSG 513
G +P R I C ++SG
Sbjct: 561 KGYTPTRSLYRNVIQCVCEMESG 583
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 87/423 (20%), Positives = 165/423 (39%), Gaps = 52/423 (12%)
Query: 119 MLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE-AQC 177
+L+ +LC K A L D ++ G + R + + L+ + L + +
Sbjct: 291 ILVDALCSKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPL 350
Query: 178 NKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDE 237
++ Y++++ L+K N LD + E+M T N + C AG VDE
Sbjct: 351 EGCELEVFRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDE 410
Query: 238 AFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS---------- 287
A + G +P ++YN L+H LC + V++A D+LK + F
Sbjct: 411 ALELYRSRSEIGFAPTAMSYNYLIHTLCANESVEQAYDVLKGAIDRGHFLGGKTFSTLTN 470
Query: 288 ------------------------PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
P + +IS C + K+++A + + ++SG
Sbjct: 471 ALCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDT 530
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV--GKVNY--- 378
+ F SLI G + + D A + +M G P + ++I+ C + G+ N+
Sbjct: 531 SFKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTT 590
Query: 379 ----GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
L LW + +++ I + + + AR + + R I P +
Sbjct: 591 LLKFQLSLWEH--------KVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNI 642
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
++ Y K+ + +A ++ E+ K K + ++I G C + DA+ +M G
Sbjct: 643 LMLQSYLKNEKIADALHFFHDLREQGKTKKRLYQVMIVGLCKANKLDDAMHFLEEMKGEG 702
Query: 495 CSP 497
P
Sbjct: 703 LQP 705
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/445 (21%), Positives = 180/445 (40%), Gaps = 52/445 (11%)
Query: 104 TREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLG-----FLVSS 158
+R ++ + +YN L+ +LC + S + YD ++ G + LG L ++
Sbjct: 417 SRSEIGFAPTAMSYNYLIHTLCA---NESVEQAYDVLK--GAIDRGHFLGGKTFSTLTNA 471
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
+ D+++EL+ A + + ++S L K++DA+ + +S
Sbjct: 472 LCWKGKPDMARELVIAAAERDLLPKRIAGCKIISALCDVGKVEDALMINELFNKSGVDTS 531
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA--RDL 276
F L+ G + D A K + M+ G +P Y ++ +C ++ ++ L
Sbjct: 532 FKMFTSLIYGSITLMRGDIAAKLIIRMQEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTL 591
Query: 277 LK-EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGF 335
LK ++ L + V++Y I G K K A ++D MDR G P + ++ +
Sbjct: 592 LKFQLSL---WEHKVQAYNLFIEGAGFAGKPKLARLVYDMMDRDGITPTVASNILMLQSY 648
Query: 336 VKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
+K + AL + + G + + +I G C+ K++ + EM + S+
Sbjct: 649 LKNEKIADALHFFHDLREQGKTKKRL-YQVMIVGLCKANKLDDAMHFLEEMKGEGLQPSI 707
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEA------ 449
+ V I LC + EA L+ + +++ I N ++ KS V EA
Sbjct: 708 ECYEVNIQKLCNEEKYDEAVGLVNEFRKSGRRITAFIGNVLLHNAMKSKGVYEAWTRMRN 767
Query: 450 -------------------NAIVVEME--------EKCKP-DKFTFTILIAGHCMKGRAP 481
I +E+E EKC P D +T+ +L+ M +A
Sbjct: 768 IEDKIPEMKSLGELIGLFSGRIDMEVELKRLDEVIEKCYPLDMYTYNMLLRMIVM-NQAE 826
Query: 482 DAIVIFYKMLATGCSPDEITVRILS 506
DA + ++ G P+E T IL
Sbjct: 827 DAYEMVERIARRGYVPNERTDMILE 851
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 153/418 (36%), Gaps = 80/418 (19%)
Query: 116 TYNMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
YN+ +R+L + G L++ A L +G + +V + LD ++L E
Sbjct: 323 AYNIWIRALIKAGFLNNPADFLQKISPLEGCELEVFRYNSMVFQLLKENNLDGVYDILTE 382
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHL----ETSTFNVLMGGLC 230
V N + L K +D+A+ EL RS S + ++N L+ LC
Sbjct: 383 MMVRGVSPNKKTMNAALCFFCKAGFVDEAL----ELYRSRSEIGFAPTAMSYNYLIHTLC 438
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL-------------- 276
+ V++A+ L G G T++TL + LC + D AR+L
Sbjct: 439 ANESVEQAYDVLKGAIDRGHFLGGKTFSTLTNALCWKGKPDMARELVIAAAERDLLPKRI 498
Query: 277 --------------------LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
+ E+ KS + + +T++I G L + A+ L M
Sbjct: 499 AGCKIISALCDVGKVEDALMINELFNKSGVDTSFKMFTSLIYGSITLMRGDIAAKLIIRM 558
Query: 317 DRSGTKP--------------------NAFT----------------FNSLIDGFVKVGN 340
G P N FT +N I+G G
Sbjct: 559 QEKGYTPTRSLYRNVIQCVCEMESGEKNFFTTLLKFQLSLWEHKVQAYNLFIEGAGFAGK 618
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
A +Y M G P V + +++ Y + K+ L +H++ + + + V
Sbjct: 619 PKLARLVYDMMDRDGITPTVASNILMLQSYLKNEKIADALHFFHDLREQGKTKK-RLYQV 677
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+I LCK+N+L +A L ++K + P Y I C DEA +V E +
Sbjct: 678 MIVGLCKANKLDDAMHFLEEMKGEGLQPSIECYEVNIQKLCNEEKYDEAVGLVNEFRK 735
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/243 (21%), Positives = 101/243 (41%), Gaps = 7/243 (2%)
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
++R ++ GY + A F M G ++F ++ L++ V+ DS I+
Sbjct: 181 SLRLCDALVVGYAVAGRTDIALQHFGNMRFRGLDLDSFGYHVLLNALVEEKCFDSFDVIF 240
Query: 349 KKMLFHG--CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
++ G C VT + L++ +C+ GK++ D + + + +L+ LC
Sbjct: 241 DQISVRGFVC---AVTHSILVKKFCKQGKLDEAEDYLRALLPNDPAGCGSGLGILVDALC 297
Query: 407 KSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME--EKCKPDK 464
+ QEA LL ++K V YN I K+G ++ + ++ E C+ +
Sbjct: 298 SKRKFQEATKLLDEIKLVGTVNMDRAYNIWIRALIKAGFLNNPADFLQKISPLEGCELEV 357
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKES 524
F + ++ + I +M+ G SP++ T+ K+G EA + S
Sbjct: 358 FRYNSMVFQLLKENNLDGVYDILTEMMVRGVSPNKKTMNAALCFFCKAGFVDEALELYRS 417
Query: 525 LHE 527
E
Sbjct: 418 RSE 420
>AT1G26500.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9158380-9159897 FORWARD
LENGTH=505
Length = 505
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 134/278 (48%), Gaps = 10/278 (3%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
TF +++ L SA ++ + + + M FG ++ T N + LC+ K V+ A+ + +
Sbjct: 148 TFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLCKEKLVEEAKFVF--I 205
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
LK P+ +Y T+I G+C + + EA+ L++ M G + +++ +K
Sbjct: 206 KLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQ 265
Query: 341 MDSALGIYKKMLF-HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
D A ++ M+ G D + +I+ C+ G+++ ++ EM R + T++
Sbjct: 266 FDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWA 325
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
LI L R+ EA L+ ++ DI SIY+ +I G K EA + +M ++
Sbjct: 326 SLIYGLLVKRRVVEAYGLVEGVENPDI----SIYHGLIKGLVKIKRASEATEVFRKMIQR 381
Query: 460 -CKPDKFTFTILIAGHC-MKGR-APDAIVIFYKMLATG 494
C+P T+ +L+ GH +GR PD +V F + G
Sbjct: 382 GCEPIMHTYLMLLQGHLGRRGRKGPDPLVNFDTIFVGG 419
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 116/269 (43%), Gaps = 11/269 (4%)
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
T N +L + + +D +L +E+G + N +++ V+ ++K+ + F
Sbjct: 114 TSNKMLAIIGNSRNMDLFWELAQEIGKRGLV--NDKTFRIVLKTLASARELKKCVNYFHL 171
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
M+ G N T N ++ K ++ A ++ K L PD +T+ ++I+G+C VG
Sbjct: 172 MNGFGYLYNVETMNRGVETLCKEKLVEEAKFVFIK-LKEFIKPDEITYRTMIQGFCDVGD 230
Query: 376 VNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL--KRTDIVPQPSIY 433
+ LW+ M + ++ L K N+ EA + + KR + Y
Sbjct: 231 LIEAAKLWNLMMDEGFDVDIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDL-DGGFY 289
Query: 434 NHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA 492
+ID CK+G +D A + EM E+ D T+ LI G +K R +A Y ++
Sbjct: 290 RVMIDWLCKNGRIDMARKVFDEMRERGVYVDNLTWASLIYGLLVKRRVVEA----YGLVE 345
Query: 493 TGCSPDEITVRILSSCLLKSGMPGEAARI 521
+PD L L+K EA +
Sbjct: 346 GVENPDISIYHGLIKGLVKIKRASEATEV 374
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/389 (20%), Positives = 149/389 (38%), Gaps = 52/389 (13%)
Query: 26 ALARCFTLTQLTYASCDKGSITKP--EAWFVKIVSTLFLHSNSLDTRVLSYFGK---HLT 80
++ RCF L +++ + P + +++ + L+ NS D+R++S LT
Sbjct: 17 SIRRCFILNHRFFSTELTPTTITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLT 76
Query: 81 PSLVLEVVKRLNNPILGFK----FFQFTREKLNVHHSFWTYNMLL--RSLCQKGLHSSAK 134
L+V NN L ++ FF +++ HH +T+ + L G +
Sbjct: 77 HEFFLQVC---NNFPLSWRPVHRFFLYSQ----THHPDFTHTSTTSNKMLAIIGNSRNMD 129
Query: 135 LLYDCMRFDGK--LPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLS 192
L ++ + GK L + + ++ + A L N + +
Sbjct: 130 LFWELAQEIGKRGLVNDKTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVE 189
Query: 193 VLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSP 252
L K +++A +F +L + + T+ ++ G C GD+ EA K N M G
Sbjct: 190 TLCKEKLVEEAKFVFIKL-KEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDV 248
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
DI ++ L + + D A + + K + Y +I CK ++ A +
Sbjct: 249 DIEAGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFYRVMIDWLCKNGRIDMARKV 308
Query: 313 FDEMDRSGT-------------------------------KPNAFTFNSLIDGFVKVGNM 341
FDEM G P+ ++ LI G VK+
Sbjct: 309 FDEMRERGVYVDNLTWASLIYGLLVKRRVVEAYGLVEGVENPDISIYHGLIKGLVKIKRA 368
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
A +++KM+ GC P + T+ L++G+
Sbjct: 369 SEATEVFRKMIQRGCEPIMHTYLMLLQGH 397
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 69/158 (43%), Gaps = 1/158 (0%)
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGY 440
+L E+ R + TF +++ L + L++ + + + N ++
Sbjct: 133 ELAQEIGKRGLVND-KTFRIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETL 191
Query: 441 CKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEI 500
CK V+EA + ++++E KPD+ T+ +I G C G +A ++ M+ G D
Sbjct: 192 CKEKLVEEAKFVFIKLKEFIKPDEITYRTMIQGFCDVGDLIEAAKLWNLMMDEGFDVDIE 251
Query: 501 TVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSYY 538
+ + LLK EA+++ + +G L +Y
Sbjct: 252 AGKKIMETLLKKNQFDEASKVFYVMVSKRGGDLDGGFY 289
>AT3G06430.1 | Symbols: EMB2750 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:1956658-1958240
REVERSE LENGTH=486
Length = 486
Score = 95.5 bits (236), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 19/334 (5%)
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE--TSTFN 223
+V K+L ++ N VN V LS L+ + A+ +F +++R + + T+
Sbjct: 73 NVKKKLDRRSKANG-WVNTVT--ETLSDLIAKKQWLQALEVF-DMLREQTFYQPKEGTYM 128
Query: 224 VLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK 283
L+ L +G + A K + M G P + Y LL R +D A +L ++
Sbjct: 129 KLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALLAAYTRSNLIDDAFSILDKMKSF 188
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ P+V +Y+T++ S+ SL+ EMD PN T N ++ G+ +VG D
Sbjct: 189 PQCQPDVFTYSTLLKACVDASQFDLVDSLYKEMDERLITPNTVTQNIVLSGYGRVGRFDQ 248
Query: 344 ALGIYKKMLFH-GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN--ISASLHTFSV 400
+ ML C PDV T ++ + +GK++ ++ W+E RN I TF++
Sbjct: 249 MEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKIDM-MESWYE-KFRNFGIEPETRTFNI 306
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EK 459
LI K + ++ +++ + S YN++I+ + G+ +M E
Sbjct: 307 LIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTYNNIIEAFADVGDAKNMELTFDQMRSEG 366
Query: 460 CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
K D TF LI G+ G +F+K++++
Sbjct: 367 MKADTKTFCCLINGYANAG-------LFHKVISS 393
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/391 (23%), Positives = 162/391 (41%), Gaps = 51/391 (13%)
Query: 97 GFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLV 156
+ F RE+ TY LL L + G + A+ L+D M +G P L L+
Sbjct: 107 ALEVFDMLREQTFYQPKEGTYMKLLVLLGKSGQPNRAQKLFDEMLEEGLEPTVELYTALL 166
Query: 157 SSFALVDRLDVSKELLAE----AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMR 212
+++ + +D + +L + QC Q + Y LL V ++ D L++E+
Sbjct: 167 AAYTRSNLIDDAFSILDKMKSFPQC---QPDVFTYSTLLKACVDASQFDLVDSLYKEMDE 223
Query: 213 SHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMR-SFGCSPDIVTYNTLLH---GLCRIK 268
T T N+++ G G D+ K L+ M S C PD+ T N +L + +I
Sbjct: 224 RLITPNTVTQNIVLSGYGRVGRFDQMEKVLSDMLVSTACKPDVWTMNIILSVFGNMGKID 283
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
++ + + G++ P R++ +I Y K + SS+ + M + T+
Sbjct: 284 MMESWYEKFRNFGIE----PETRTFNILIGSYGKKRMYDKMSSVMEYMRKLEFPWTTSTY 339
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N++I+ F VG+ + + +M G D TF LI GY G L+H++
Sbjct: 340 NNIIEAFADVGDAKNMELTFDQMRSEGMKADTKTFCCLINGYANAG-------LFHKV-- 390
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
IS+ ++ + +I + YN VI K+ ++ E
Sbjct: 391 --ISS------------------------VQLAAKFEIPENTAFYNAVISACAKADDLIE 424
Query: 449 ANAIVVEMEEK-CKPDKFTFTILIAGHCMKG 478
+ + M+E+ C D TF I++ + +G
Sbjct: 425 MERVYIRMKERQCVCDSRTFEIMVEAYEKEG 455
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 100/413 (24%), Positives = 176/413 (42%), Gaps = 53/413 (12%)
Query: 118 NMLLRSLCQKG-LHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
N LR C+ G L ++ KLL ++D D R L ++ A L KE+ +
Sbjct: 65 NTQLRRFCESGNLENAVKLLCVSGKWD---IDPRTLCSVLQLCADSKSLKDGKEVDNFIR 121
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTF-NVLMGGLCSAGDV 235
N +++ + L + L +A +F E+ +E + F N+LM L +GD
Sbjct: 122 GNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV-----KIEKALFWNILMNELAKSGDF 176
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ M S G D T++ + ++ V L + LKS F +
Sbjct: 177 SGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFI-LKSGFGERNSVGNS 235
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+++ Y K ++ A +FDEM T+ + ++NS+I+G+V G + L ++ +ML G
Sbjct: 236 LVAFYLKNQRVDSARKVFDEM----TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSG 291
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
D+ T S+ G ++ G ++H+ V +
Sbjct: 292 IEIDLATIVSVFAGCADSRLISLG-------------RAVHSIGVKACF----------- 327
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHC 475
R D N ++D Y K G++D A A+ EM ++ ++T +IAG+
Sbjct: 328 ------SRED-----RFCNTLLDMYSKCGDLDSAKAVFREMSDR---SVVSYTSMIAGYA 373
Query: 476 MKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
+G A +A+ +F +M G SPD TV + +C + + E R+ E + EN
Sbjct: 374 REGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN 426
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 176/406 (43%), Gaps = 53/406 (13%)
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNK 199
+R +G + DS L L + L + + E + K A+ ++ L++ L K
Sbjct: 120 IRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEK----ALFWNILMNELAKSGD 175
Query: 200 LDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT 259
+I LF+++M S +++ TF+ + S V + + G N+
Sbjct: 176 FSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVGNS 235
Query: 260 LLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
L+ + + VD AR + E+ + +V S+ ++I+GY ++ S+F +M S
Sbjct: 236 LVAFYLKNQRVDSARKVFDEMTER-----DVISWNSIINGYVSNGLAEKGLSVFVQMLVS 290
Query: 320 GTKPNAFTF-----------------------------------NSLIDGFVKVGNMDSA 344
G + + T N+L+D + K G++DSA
Sbjct: 291 GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSA 350
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
++++M VV++TS+I GY R G + L+ EM IS ++T + +++
Sbjct: 351 KAVFREM----SDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNC 406
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDK 464
+ L E + + +K D+ + N ++D Y K G++ EA + EM K D
Sbjct: 407 CARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFSEMRVK---DI 463
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATG-CSPDEITVR-ILSSC 508
++ +I G+ A +A+ +F +L SPDE TV +L +C
Sbjct: 464 ISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPAC 509
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 102/479 (21%), Positives = 195/479 (40%), Gaps = 91/479 (18%)
Query: 114 FWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
FW N+L+ L + G S + L+ M G DS + SF+ + + ++L
Sbjct: 162 FW--NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHG 219
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ V ++L++ +K+ ++D A +F E+ + + ++N ++ G S G
Sbjct: 220 FILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEM----TERDVISWNSIINGYVSNG 275
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTY-----------------------------------N 258
++ M G D+ T N
Sbjct: 276 LAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN 335
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
TLL + ++D A+ + +E+ +S V SYT++I+GY + EA LF+EM+
Sbjct: 336 TLLDMYSKCGDLDSAKAVFREMSDRS-----VVSYTSMIAGYAREGLAGEAVKLFEEMEE 390
Query: 319 SGTKPNAFTF-----------------------------------NSLIDGFVKVGNMDS 343
G P+ +T N+L+D + K G+M
Sbjct: 391 EGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQE 450
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM-NTRNISASLHTFSVLI 402
A ++ +M D++++ ++I GY + N L L++ + + S T + ++
Sbjct: 451 AELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVL 506
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKP 462
+ + R++ + R + N ++D Y K G + A+ + ++ K
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK--- 563
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCLLKSGMPGEAAR 520
D ++T++IAG+ M G +AI +F +M G DEI+ V +L +C SG+ E R
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYAC-SHSGLVDEGWR 621
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/254 (23%), Positives = 111/254 (43%), Gaps = 15/254 (5%)
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
N LM G + EA + MR DI+++NT++ G + + A L +
Sbjct: 436 NALMDMYAKCGSMQEAELVFSEMRV----KDIISWNTIIGGYSKNCYANEALSLFNLLLE 491
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD 342
+ +FSP+ R+ V+ LS + + + R+G + NSL+D + K G +
Sbjct: 492 EKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGAL- 550
Query: 343 SALGIYKKMLFHG-CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
+ MLF D+V++T +I GY G + L+++M I A +F L
Sbjct: 551 ----LLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSL 606
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSI--YNHVIDGYCKSGNVDEANAIVVEMEEK 459
+ Y C + L + + R + +P++ Y ++D ++G++ +A + M
Sbjct: 607 L-YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENM--P 663
Query: 460 CKPDKFTFTILIAG 473
PD + L+ G
Sbjct: 664 IPPDATIWGALLCG 677
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/400 (19%), Positives = 169/400 (42%), Gaps = 26/400 (6%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+Y ++ ++GL A L++ M +G PD + +++ A LD K +
Sbjct: 364 SYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWI 423
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL---CSA 232
+ N + + V + L+ + K + +A +F E MR + ++N ++GG C A
Sbjct: 424 KENDLGFDIFVSNALMDMYAKCGSMQEAELVFSE-MRVKDII---SWNTIIGGYSKNCYA 479
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
+ F L + F SPD T +L + D+ R++ + +++ + +
Sbjct: 480 NEALSLFNLLLEEKRF--SPDERTVACVLPACASLSAFDKGREIHGYI-MRNGYFSDRHV 536
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
+++ Y K + A LFD++ + ++ +I G+ G A+ ++ +M
Sbjct: 537 ANSLVDMYAKCGALLLAHMLFDDI----ASKDLVSWTVMIAGYGMHGFGKEAIALFNQMR 592
Query: 353 FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLISYLCKSNRL 411
G D ++F SL+ G V+ G ++ M I ++ ++ ++ L ++ L
Sbjct: 593 QAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACIVDMLARTGDL 652
Query: 412 QEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILI 471
+A R ++ I P +I+ ++ G C+ + + V E + +P+ + +L+
Sbjct: 653 IKA---YRFIENMPIPPDATIWGALLCG-CRIHHDVKLAEKVAEKVFELEPENTGYYVLM 708
Query: 472 AGHCMKGRAPDAIVIFYKMLAT-------GCSPDEITVRI 504
A + + + K + GCS EI R+
Sbjct: 709 ANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRV 748
>AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:5760793-5762619 FORWARD
LENGTH=608
Length = 608
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 167/398 (41%), Gaps = 16/398 (4%)
Query: 112 HSFWTYNMLLRSLCQKGLHS---SAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVS 168
+F+++++ L C +G K++ M +G P+ G ++ + +
Sbjct: 172 RNFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEA 231
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+++ C+ + V+ V+ L+S + + A+ LF ++++ T+ L+ G
Sbjct: 232 FQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKG 291
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
G VDEAF L+ ++S G +PDIV N ++H R+ + AR + + K K P
Sbjct: 292 FVDLGMVDEAFTVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLE-KRKLVP 350
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDR----SGTKPNAFTFNSLIDGFVKVGNMDSA 344
+ ++ +++S C S FD + R GT + T N L + F K+G A
Sbjct: 351 DQYTFASILSSLC-------LSGKFDLVPRITHGIGTDFDLVTGNLLSNCFSKIGYNSYA 403
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISY 404
L + M + D T+T + CR G + ++ + H S +I
Sbjct: 404 LKVLSIMSYKDFALDCYTYTVYLSALCRGGAPRAAIKMYKIIIKEKKHLDAHFHSAIIDS 463
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPD 463
L + + A L ++ Y I G ++ ++EA ++ +M+E P+
Sbjct: 464 LIELGKYNTAVHLFKRCILEKYPLDVVSYTVAIKGLVRAKRIEEAYSLCCDMKEGGIYPN 523
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ T+ +I+G C + I + + G D T
Sbjct: 524 RRTYRTIISGLCKEKETEKVRKILRECIQEGVELDPNT 561
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 150/320 (46%), Gaps = 27/320 (8%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG---DVDEAF 239
N + ++ V K N ++ A+ +F E +R + +F++ + CS G D+
Sbjct: 142 NTRAMNMMMDVNFKLNVVNGALEIF-EGIRFRNFF---SFDIALSHFCSRGGRGDLVGVK 197
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLK--SKFSPNVRSYTTVI 297
L M G P+ + +L CR V A + VGL S S +V ++ ++
Sbjct: 198 IVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEA---FQVVGLMICSGISVSVNVWSMLV 254
Query: 298 SGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP 357
SG+ + + ++A LF++M + G PN T+ SLI GFV +G +D A + K+ G
Sbjct: 255 SGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTVLSKVQSEGLA 314
Query: 358 PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL 417
PD+V +I Y R+G+ ++ + R + +TF+ ++S LC S + DL
Sbjct: 315 PDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCLSGKF----DL 370
Query: 418 LRQLKRT-----DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILI 471
+ ++ D+V N + + + K G A ++ M K D +T+T+ +
Sbjct: 371 VPRITHGIGTDFDLVTG----NLLSNCFSKIGYNSYALKVLSIMSYKDFALDCYTYTVYL 426
Query: 472 AGHCMKGRAPDAIVIFYKML 491
+ C +G AP A + YK++
Sbjct: 427 SALC-RGGAPRAAIKMYKII 445
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 106/245 (43%), Gaps = 33/245 (13%)
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLL---------HGLCRIKEVDRARDLLK-------- 278
D+A + GM SFG P+ N ++ +G I E R R+
Sbjct: 125 DKAIEVYTGMSSFGFVPNTRAMNMMMDVNFKLNVVNGALEIFEGIRFRNFFSFDIALSHF 184
Query: 279 --------EVGLK--------SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
VG+K F PN + ++ C+ + EA + M SG
Sbjct: 185 CSRGGRGDLVGVKIVLKRMIGEGFYPNRERFGQILRLCCRTGCVSEAFQVVGLMICSGIS 244
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDL 382
+ ++ L+ GF + G A+ ++ KM+ GC P++VT+TSLI+G+ +G V+ +
Sbjct: 245 VSVNVWSMLVSGFFRSGEPQKAVDLFNKMIQIGCSPNLVTYTSLIKGFVDLGMVDEAFTV 304
Query: 383 WHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
++ + ++ + +++I + R +EAR + L++ +VP + ++ C
Sbjct: 305 LSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRKLVPDQYTFASILSSLCL 364
Query: 443 SGNVD 447
SG D
Sbjct: 365 SGKFD 369
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/285 (21%), Positives = 113/285 (39%), Gaps = 44/285 (15%)
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS-KFSPNVRSYTTVISGYCKLSKMK 307
GC + LL R D+A ++ G+ S F PN R+ ++ KL+ +
Sbjct: 103 GCEIKPRVFLLLLEIFWRGHIYDKAIEVY--TGMSSFGFVPNTRAMNMMMDVNFKLNVVN 160
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI---YKKMLFHGCPPDVVTFT 364
A +F+ + N F+F+ + F G +G+ K+M+ G P+ F
Sbjct: 161 GALEIFEGIRFR----NFFSFDIALSHFCSRGGRGDLVGVKIVLKRMIGEGFYPNRERFG 216
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
++ CR G V+ + M IS S++ +S+L+S +S Q+A DL ++
Sbjct: 217 QILRLCCRTGCVSEAFQVVGLMICSGISVSVNVWSMLVSGFFRSGEPQKAVDLFNKM--- 273
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAI 484
++ C P+ T+T LI G G +A
Sbjct: 274 -------------------------------IQIGCSPNLVTYTSLIKGFVDLGMVDEAF 302
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQ 529
+ K+ + G +PD + ++ + G EA ++ SL + +
Sbjct: 303 TVLSKVQSEGLAPDIVLCNLMIHTYTRLGRFEEARKVFTSLEKRK 347
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 142/314 (45%), Gaps = 16/314 (5%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
++N ++ G G ++A + N M G P+ T+ ++ + R L+K +
Sbjct: 231 SWNAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRADPSLTRSLVKLI 290
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
K + N T ++ + K ++ A +F+E+ GT+ N T+N++I G+ ++G+
Sbjct: 291 DEK-RVRLNCFVKTALLDMHAKCRDIQSARRIFNEL---GTQRNLVTWNAMISGYTRIGD 346
Query: 341 MDSALGIYKKMLFHGCPP-DVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
M SA + LF P +VV++ SLI GY G+ ++ + +M S
Sbjct: 347 MSSA-----RQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKPDEVTM 401
Query: 400 VLISYLCKSNRLQEARD-LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+ + C E D ++ +++ I S Y +I Y + GN+ EA + EM+E
Sbjct: 402 ISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVFDEMKE 461
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCLLKSGMPGE 517
+ D ++ L G + + + KM G PD +T +L++C ++G+ E
Sbjct: 462 R---DVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVLTAC-NRAGLLKE 517
Query: 518 AARIKESLHENQGD 531
RI +S+ D
Sbjct: 518 GQRIFKSIRNPLAD 531
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 102/226 (45%), Gaps = 17/226 (7%)
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
PNV ++ + K+ + L+++ R G P+AF+F +I + G + AL
Sbjct: 69 PNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGRFGILFQAL-- 126
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+K+ F P +++ Y + V ++ +++ R S ++V+IS K
Sbjct: 127 VEKLGFFKDP---YVRNVIMDMYVKHESVESARKVFDQISQRKGS----DWNVMISGYWK 179
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTF 467
+EA L + D+V + +I G+ K +++ A M EK ++
Sbjct: 180 WGNKEEACKLFDMMPENDVVS----WTVMITGFAKVKDLENARKYFDRMPEKS---VVSW 232
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCLLKS 512
+++G+ G DA+ +F ML G P+E T V ++S+C ++
Sbjct: 233 NAMLSGYAQNGFTEDALRLFNDMLRLGVRPNETTWVIVISACSFRA 278
>AT5G47360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:19214445-19215878 REVERSE
LENGTH=477
Length = 477
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 138/309 (44%), Gaps = 41/309 (13%)
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
V + V Y+ ++ + L+ A L +E+ + + T+ ++ G C+AG +D+A+
Sbjct: 161 VCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDAW 220
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK---FSPNVRSYTTV 296
+ M C + VTY+ +L G+C+ +++RA +LL E+ + SPN +YT V
Sbjct: 221 RLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTLV 280
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFT-----------------FNSLIDGFVKVG 339
I +C+ +++EA + D M G PN T + LID VK+G
Sbjct: 281 IQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDVKALSKLIDKLVKLG 340
Query: 340 NM-------------------DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
+ + A I++ ML G PD + + + C + +
Sbjct: 341 GVSLSECFSSATVSLIRMKRWEEAEKIFRLMLVRGVRPDGLACSHVFRELCLLERYLDCF 400
Query: 381 DLWHEMNTRNISASLHT--FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
L+ E+ +++ +++ + +VL+ LC+ EA L + + + + S +I+
Sbjct: 401 LLYQEIEKKDVKSTIDSDIHAVLLLGLCQQGNSWEAAKLAKSMLDKKMRLKVSHVEKIIE 460
Query: 439 GYCKSGNVD 447
K+G+ D
Sbjct: 461 ALKKTGDED 469
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 134/279 (48%), Gaps = 18/279 (6%)
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYN---TLLH 262
L +EL ++ L++S N ++ C +F +G+R F + + ++ +
Sbjct: 47 LEKELASANVQLDSSCINEVLRR-CDPN------QFQSGLRFFIWAGTLSSHRHSAYMYT 99
Query: 263 GLCRIKEVDRARDLLK---EVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRS 319
C I ++ DL+K E K + NV++ V++ + + EA + +
Sbjct: 100 KACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLTLCNQANLADEALWVLRKFPEF 159
Query: 320 GTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
+ +N +I F G+++ A + K+M G PDV+T+TS+I GYC GK++
Sbjct: 160 NVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSMINGYCNAGKIDDA 219
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD----IVPQPSIYNH 435
L EM+ + + T+S ++ +CKS ++ A +LL ++++ D I P Y
Sbjct: 220 WRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDGGGLISPNAVTYTL 279
Query: 436 VIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAG 473
VI +C+ V+EA ++ M + C P++ T +LI G
Sbjct: 280 VIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQG 318
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 6/208 (2%)
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
D AL + +K D V + +I + G +N L EM+ + + T++ +
Sbjct: 147 DEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIKEMDCVGLYPDVITYTSM 206
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-- 459
I+ C + ++ +A L +++ + D V Y+ +++G CKSG+++ A ++ EME++
Sbjct: 207 INGYCNAGKIDDAWRLAKEMSKHDCVLNSVTYSRILEGVCKSGDMERALELLAEMEKEDG 266
Query: 460 ---CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPG 516
P+ T+T++I C K R +A+++ +M GC P+ +T +L +L++
Sbjct: 267 GGLISPNAVTYTLVIQAFCEKRRVEEALLVLDRMGNRGCMPNRVTACVLIQGVLENDEDV 326
Query: 517 EA-ARIKESLHENQGDSLKKSYYEGTNS 543
+A +++ + L + G SL + + T S
Sbjct: 327 KALSKLIDKLVKLGGVSLSECFSSATVS 354
>AT1G63320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23488884-23489530 REVERSE
LENGTH=189
Length = 189
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 10/155 (6%)
Query: 206 LFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLC 265
LFRE+ + T T+ L+ GL AGD D A + M S G PDI+TYN LL GLC
Sbjct: 3 LFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLC 62
Query: 266 RIKEVDRA---------RDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
+ ++++A DL + LK PNV +YTT+ISG+CK +EA +LF +M
Sbjct: 63 KNGKLEKALVAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
G P++ T+N+LI ++ G+ ++ + K+M
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
LF EM + G N T+ +LI G + G+ D A I+K+M+ G PPD++T+ L++G
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 371 CR---------VGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
C+ GKV G DL+ ++ + + ++ T++ +IS CK +EA L R++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
K +P YN +I + + G+ + ++ EM
Sbjct: 122 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM 156
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSAL--- 345
N +YTT+I G + A +F EM G P+ T+N L+DG K G ++ AL
Sbjct: 15 NTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAG 74
Query: 346 ------GIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFS 399
++ + G P+VVT+T++I G+C+ G L+ +M T++
Sbjct: 75 KVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYN 134
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
LI + + +L+++++ S Y V D
Sbjct: 135 TLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 78/156 (50%), Gaps = 13/156 (8%)
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
++L+ EM+ R + + T++ LI L ++ A+++ +++ + P YN ++DG
Sbjct: 1 MELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDG 60
Query: 440 YCKSGNVDEANAIVVEMEE-----------KCKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
CK+G +++A + ++E+ KP+ T+T +I+G C KG +A +F
Sbjct: 61 LCKNGKLEKA-LVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFR 119
Query: 489 KMLATGCSPDEITVRILSSCLLKSGMPGEAAR-IKE 523
KM G PD T L L+ G +A IKE
Sbjct: 120 KMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKE 155
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
EL E + N V Y L+ L + D A +F+E++ + T+N+L+ GL
Sbjct: 2 ELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPDIMTYNILLDGL 61
Query: 230 CSAGDVDEAF---KFLNGMRSF------GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
C G +++A K +G F G P++VTY T++ G C+ + A L +++
Sbjct: 62 CKNGKLEKALVAGKVEDGWDLFCSLSLKGVKPNVVTYTTMISGFCKKGFKEEAYTLFRKM 121
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
P+ +Y T+I + + ++ L EM +A T+ + D
Sbjct: 122 KEDGPL-PDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTD 173
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 10/140 (7%)
Query: 166 DVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAIC---------LFRELMRSHSH 216
D+++E+ E + V + + Y+ LL L K+ KL+ A+ LF L
Sbjct: 33 DMAQEIFKEMVSDGVPPDIMTYNILLDGLCKNGKLEKALVAGKVEDGWDLFCSLSLKGVK 92
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
T+ ++ G C G +EA+ M+ G PD TYNTL+ R + + +L
Sbjct: 93 PNVVTYTTMISGFCKKGFKEEAYTLFRKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAEL 152
Query: 277 LKEVGLKSKFSPNVRSYTTV 296
+KE+ +F+ + +Y V
Sbjct: 153 IKEM-RSCRFAGDASTYGLV 171
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 190/439 (43%), Gaps = 57/439 (12%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++N ++ GL A+ L+D M + + L+ + + +V+ +V EL+ E
Sbjct: 50 SWNSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVF-ELMPER 108
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N V + ++ ++ + +A LF + + ++ V+ GGL G +
Sbjct: 109 -------NVVSWTAMVKGYMQEGMVGEAESLFWRMPERNE----VSWTVMFGGLIDDGRI 157
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
D+A K + M D+V ++ GLCR VD AR + E+ + NV ++TT
Sbjct: 158 DKARKLYDMM----PVKDVVASTNMIGGLCREGRVDEARLIFDEMRER-----NVVTWTT 208
Query: 296 VISGYCKLSKMKEASSLFDEMDR---------------SGTKPNAFTF------------ 328
+I+GY + +++ A LF+ M SG +A F
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC 268
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
N++I GF +VG + A ++ M D T+ +I+ Y R G LDL+ +M
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLME----DRDNATWRGMIKAYERKGFELEALDLFAQMQK 324
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
+ + S + ++S LQ R + L R + + ++ Y K G + +
Sbjct: 325 QGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVK 384
Query: 449 ANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSS 507
A + K D + +I+G+ G +A+ IF++M ++G P+++T + IL++
Sbjct: 385 AKLVFDRFSSK---DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTA 441
Query: 508 CLLKSGMPGEAARIKESLH 526
C +G E I ES+
Sbjct: 442 CSY-AGKLEEGLEIFESME 459
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 156/346 (45%), Gaps = 56/346 (16%)
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
+S L + K+++A R+ S ++N ++ G S G EA + + M
Sbjct: 24 ISRLSRIGKINEA----RKFFDSLQFKAIGSWNSIVSGYFSNGLPKEARQLFDEM----S 75
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEAS 310
++V++N L+ G + + + AR++ + + + NV S+T ++ GY + + EA
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPER-----NVVSWTAMVKGYMQEGMVGEAE 130
Query: 311 SLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGY 370
SLF M + N ++ + G + G +D A +Y M DVV T++I G
Sbjct: 131 SLFWRM----PERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVK----DVVASTNMIGGL 182
Query: 371 CRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT------ 424
CR G+V+ ++ EM RN+ T++ +I+ ++NR+ AR L +
Sbjct: 183 CREGRVDEARLIFDEMRERNVV----TWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWT 238
Query: 425 -------------------DIVP-QPSIY-NHVIDGYCKSGNVDEANAIVVEMEEKCKPD 463
+++P +P I N +I G+ + G + +A + ME++ D
Sbjct: 239 SMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVGFGEVGEISKARRVFDLMEDR---D 295
Query: 464 KFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
T+ +I + KG +A+ +F +M G P + + ILS C
Sbjct: 296 NATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVC 341
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/410 (19%), Positives = 176/410 (42%), Gaps = 25/410 (6%)
Query: 120 LLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNK 179
++ LC++G A+L++D MR + + +++ + +R+DV+++L E K
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTT----MITGYRQNNRVDVARKLF-EVMPEK 232
Query: 180 VQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAF 239
+V+ + ++L +++DA F E+M + N ++ G G++ +A
Sbjct: 233 TEVS---WTSMLLGYTLSGRIEDAEEFF-EVMPMKPVI---ACNAMIVGFGEVGEISKAR 285
Query: 240 KFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISG 299
+ + M D T+ ++ R A DL ++ K P+ S +++S
Sbjct: 286 RVFDLME----DRDNATWRGMIKAYERKGFELEALDLFAQMQ-KQGVRPSFPSLISILSV 340
Query: 300 YCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
L+ ++ + + R + + + L+ +VK G + A ++ + D
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRF----SSKD 396
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
++ + S+I GY G L ++HEM + + T +++ + +L+E ++
Sbjct: 397 IIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE 456
Query: 420 QLK-RTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKG 478
++ + + P Y+ +D ++G VD+A ++ M KPD + L+ G C
Sbjct: 457 SMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESM--TIKPDATVWGALL-GACKTH 513
Query: 479 RAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
D + K L + T +LSS G+ A +++++ N
Sbjct: 514 SRLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTN 563
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 101/494 (20%), Positives = 213/494 (43%), Gaps = 89/494 (18%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N++L + G S + MR D P++ ++S A +D+ +L
Sbjct: 207 WNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVV 266
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ V + ++LLS+ K + DDA LFR + R+ +T T+N ++ G +G ++
Sbjct: 267 VSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRA----DTVTWNCMISGYVQSGLME 322
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
E+ F M S G PD +T+++LL + + + ++ + + + ++ S ++ + +
Sbjct: 323 ESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI-MRHSISLDIFLTSAL 381
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
I Y K + A ++F + + + F ++I G++ G +L +++ ++
Sbjct: 382 IDAYFKCRGVSMAQNIFSQCN----SVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKI 437
Query: 357 PPDVVTFTSL-----------------------------------IEGYCRVGKVNYGLD 381
P+ +T S+ I+ Y + G++N +
Sbjct: 438 SPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYE 497
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDI--------------- 426
++ ++ R+I +++ +I+ +S+ A D+ RQ+ + I
Sbjct: 498 IFERLSKRDIV----SWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACA 553
Query: 427 -VPQPS-----------------IYNH--VIDGYCKSGNVDEANAIVVEMEEKCKPDKFT 466
+P S +Y+ +ID Y K GN+ A + M+EK + +
Sbjct: 554 NLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEK---NIVS 610
Query: 467 FTILIAGHCMKGRAPDAIVIFYKMLA-TGCSPDEIT-VRILSSCLLKSGMPGEAARIKES 524
+ +IA G+ D++ +F++M+ +G PD+IT + I+SSC G E R S
Sbjct: 611 WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSC-CHVGDVDEGVRFFRS 669
Query: 525 LHENQGDSLKKSYY 538
+ E+ G ++ +Y
Sbjct: 670 MTEDYGIQPQQEHY 683
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 187/475 (39%), Gaps = 86/475 (18%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S +N ++ S + GL + A Y M G PD LV + + L
Sbjct: 102 SIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNFKGIDFLS 161
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
+ N V +L+ +++ K+D LF +++ + +NV++ G
Sbjct: 162 DTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQK----DCVIWNVMLNGYAKC 217
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLL---------------HGLCRIKEVD------ 271
G +D K + MR SP+ VT++ +L HGL + VD
Sbjct: 218 GALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSIK 277
Query: 272 -----------RARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG 320
R D K + S+ + ++ +ISGY + M+E+ + F EM SG
Sbjct: 278 NSLLSMYSKCGRFDDASKLFRMMSR--ADTVTWNCMISGYVQSGLMEESLTFFYEMISSG 335
Query: 321 TKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGL 380
P+A TF+SL+ K N++ I+ ++ H D+ ++LI+ Y + V+
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 381 DLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP---------- 430
+++ + N+ ++ F+ +IS + ++ ++ R L + I P
Sbjct: 396 NIFSQCNSVDVV----VFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVI 451
Query: 431 -------------------------SIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF 465
+I VID Y K G ++ A I E K D
Sbjct: 452 GILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEI---FERLSKRDIV 508
Query: 466 TFTILIAGHCMKGRAPDAIV-IFYKMLATGCSPDEITVR-ILSSCLLKSGMPGEA 518
++ +I C + P A + IF +M +G D +++ LS+C + +P E+
Sbjct: 509 SWNSMIT-RCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSAC---ANLPSES 559
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/387 (19%), Positives = 165/387 (42%), Gaps = 16/387 (4%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+N ++ Q GL + + M G LPD+ L+ S + + L+ K++
Sbjct: 307 TWNCMISGYVQSGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYI 366
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ + ++ + L+ K + A +F + + ++ F ++ G G
Sbjct: 367 MRHSISLDIFLTSALIDAYFKCRGVSMAQNIFSQC----NSVDVVVFTAMISGYLHNGLY 422
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
++ + + SP+ +T ++L + + + R+L + +K F
Sbjct: 423 IDSLEMFRWLVKVKISPNEITLVSILPVIGILLALKLGRELHGFI-IKKGFDNRCNIGCA 481
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
VI Y K +M A +F+ + +K + ++NS+I + N +A+ I+++M G
Sbjct: 482 VIDMYAKCGRMNLAYEIFERL----SKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSG 537
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
D V+ ++ + + ++G + M ++++ +++ S LI K L+ A
Sbjct: 538 ICYDCVSISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAM 597
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKPDKFTFTILIAG 473
++ + +K +IV +N +I G + ++ + EM EK +PD+ TF +I+
Sbjct: 598 NVFKTMKEKNIVS----WNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISS 653
Query: 474 HCMKGRAPDAIVIFYKMLAT-GCSPDE 499
C G + + F M G P +
Sbjct: 654 CCHVGDVDEGVRFFRSMTEDYGIQPQQ 680
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 102/225 (45%), Gaps = 10/225 (4%)
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSL 312
DIV++N+++ + A D+ +++G+ S + S + +S L ++
Sbjct: 506 DIVSWNSMITRCAQSDNPSAAIDIFRQMGV-SGICYDCVSISAALSACANLPSESFGKAI 564
Query: 313 FDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCR 372
M + + ++ ++LID + K GN+ +A+ ++K M ++V++ S+I
Sbjct: 565 HGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMK----EKNIVSWNSIIAACGN 620
Query: 373 VGKVNYGLDLWHEMNTRN-ISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT-DIVPQP 430
GK+ L L+HEM ++ I TF +IS C + E R + I PQ
Sbjct: 621 HGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQQ 680
Query: 431 SIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHC 475
Y V+D + ++G + EA V M PD + L+ G C
Sbjct: 681 EHYACVVDLFGRAGRLTEAYETVKSM--PFPPDAGVWGTLL-GAC 722
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 11/145 (7%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELM-RSHSHLETSTFNVLMGGLCSAGDVDEAFKF 241
N V ++++++ H KL D++CLF E++ +S + TF ++ C GDVDE +F
Sbjct: 607 NIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRF 666
Query: 242 LNGM-RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
M +G P Y ++ R + A + +K + F P+ + T++ G
Sbjct: 667 FRSMTEDYGIQPQQEHYACVVDLFGRAGRLTEAYETVKSM----PFPPDAGVWGTLL-GA 721
Query: 301 CKLSKMKE----ASSLFDEMDRSGT 321
C+L K E ASS ++D S +
Sbjct: 722 CRLHKNVELAEVASSKLMDLDPSNS 746
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 46/344 (13%)
Query: 228 GLCSAGDVDEAFKFLN-------------------------------GMRSFGCSPDIVT 256
L S+GDVD A+KFL+ M FG PD +T
Sbjct: 51 ALSSSGDVDYAYKFLSKLSDPPNYGWNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMT 110
Query: 257 YNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEM 316
Y L+ R+ L V +KS ++ T+I Y A LFDEM
Sbjct: 111 YPFLMKSSSRLSNRKLGGSLHCSV-VKSGLEWDLFICNTLIHMYGSFRDQASARKLFDEM 169
Query: 317 DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKV 376
N T+NS++D + K G++ SA ++ +M DVVT++S+I+GY + G+
Sbjct: 170 PHK----NLVTWNSILDAYAKSGDVVSARLVFDEM----SERDVVTWSSMIDGYVKRGEY 221
Query: 377 NYGLDLWHEMNTRNISASLHTFSVLISYLCKS---NRLQEARDLLRQLKRTDIVPQPSIY 433
N L+++ +M + +S ++S +C L + + R + + +
Sbjct: 222 NKALEIFDQM--MRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQ 279
Query: 434 NHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLAT 493
+ID Y K G++ +A ++ K + D + +I G G +++ +F+KM +
Sbjct: 280 TSLIDMYAKCGSIGDAWSVFYRASVK-ETDALMWNAIIGGLASHGFIRESLQLFHKMRES 338
Query: 494 GCSPDEITVRILSSCLLKSGMPGEAARIKESLHENQGDSLKKSY 537
PDEIT L + G+ EA +SL E+ + + Y
Sbjct: 339 KIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHY 382
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 126/274 (45%), Gaps = 17/274 (6%)
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G D+ NTL+H ++ AR L E+ K N+ ++ +++ Y K +
Sbjct: 138 GLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHK-----NLVTWNSILDAYAKSGDVVS 192
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP-PDVVTFTSLI 367
A +FDEM ++ + T++S+IDG+VK G + AL I+ +M+ G + VT S+I
Sbjct: 193 ARLVFDEM----SERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVI 248
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ--LKRTD 425
+G +N G + + ++ ++ + LI K + +A + + +K TD
Sbjct: 249 CACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETD 308
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE-KCKPDKFTFTILIAGHCMKGRAPDAI 484
+ ++N +I G G + E+ + +M E K PD+ TF L+A G +A
Sbjct: 309 AL----MWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAW 364
Query: 485 VIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
F + +G P + L ++G+ +A
Sbjct: 365 HFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDA 398
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/271 (19%), Positives = 118/271 (43%), Gaps = 11/271 (4%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N V ++++L K + A +F E+ S + T++ ++ G G+ ++A +
Sbjct: 173 NLVTWNSILDAYAKSGDVVSARLVFDEM----SERDVVTWSSMIDGYVKRGEYNKALEIF 228
Query: 243 NGMRSFGCS-PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
+ M G S + VT +++ + ++R + + + + L V T++I Y
Sbjct: 229 DQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRYI-LDVHLPLTVILQTSLIDMYA 287
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVV 361
K + +A S+F S + +A +N++I G G + +L ++ KM PD +
Sbjct: 288 KCGSIGDAWSVF--YRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEI 345
Query: 362 TFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
TF L+ G V + + ++ ++ L ++ +++A D + ++
Sbjct: 346 TFLCLLAACSHGGLVKEAWHFFKSLKESGAEPKSEHYACMVDVLSRAGLVKDAHDFISEM 405
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAI 452
I P S+ +++G GN++ A +
Sbjct: 406 P---IKPTGSMLGALLNGCINHGNLELAETV 433
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 105/242 (43%), Gaps = 15/242 (6%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYD-CMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAE 174
T++ ++ ++G ++ A ++D MR + + ++ + A + L+ K +
Sbjct: 207 TWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLGALNRGKTVHRY 266
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
+ + ++ +L+ + K + DA +F S + +N ++GGL S G
Sbjct: 267 ILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYR--ASVKETDALMWNAIIGGLASHGF 324
Query: 235 VDEAFKFLNGMRSFGCSPDIVTYNTLL----HGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
+ E+ + + MR PD +T+ LL HG +KE LKE G + P
Sbjct: 325 IRESLQLFHKMRESKIDPDEITFLCLLAACSHG-GLVKEAWHFFKSLKESGAE----PKS 379
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
Y ++ + +K+A EM KP +L++G + GN++ A + KK
Sbjct: 380 EHYACMVDVLSRAGLVKDAHDFISEMP---IKPTGSMLGALLNGCINHGNLELAETVGKK 436
Query: 351 ML 352
++
Sbjct: 437 LI 438
>AT1G11630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3913168-3914385 REVERSE
LENGTH=405
Length = 405
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 112/265 (42%), Gaps = 2/265 (0%)
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK-FLNGMRSFGCSPDI 254
+ N LD +I FR L + + N L+ A D EA + +L + +G PD+
Sbjct: 123 RANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDL 182
Query: 255 VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFD 314
TYN ++ LC + ++ E+ K P S+ +I G+ K K E +
Sbjct: 183 ETYNRMIRVLCESGSTSSSYSIVAEMERKW-IKPTAASFGLMIDGFYKEEKFDEVRKVMR 241
Query: 315 EMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVG 374
MD G T+N +I K A + ++ P+ VT++ LI G+C
Sbjct: 242 MMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEE 301
Query: 375 KVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYN 434
++ ++L+ M + LI LCK + A L R+ + VP S+
Sbjct: 302 NLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMK 361
Query: 435 HVIDGYCKSGNVDEANAIVVEMEEK 459
+++G VDEA ++ ++EK
Sbjct: 362 WLVNGLASRSKVDEAKELIAVVKEK 386
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 1/197 (0%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
TYN ++R LC+ G SS+ + M P + G ++ F ++ D ++++
Sbjct: 184 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 243
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
V V Y+ ++ L K K +A L +M + T+++L+ G CS ++
Sbjct: 244 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 303
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
DEA M G PD Y TL+H LC+ + + A L +E ++ + P+
Sbjct: 304 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRE-SMEKNWVPSFSVMKW 362
Query: 296 VISGYCKLSKMKEASSL 312
+++G SK+ EA L
Sbjct: 363 LVNGLASRSKVDEAKEL 379
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 128/298 (42%), Gaps = 11/298 (3%)
Query: 240 KFLNGMRSFGCSPDI----VTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ L RS SPD + ++ + L R K LL + ++++ P S+
Sbjct: 57 RILEICRSTSLSPDYHVDRIIFSVAVVTLAREKHFVAVSQLL-DGFIQNQPDPKSESFAV 115
Query: 296 -VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM-LF 353
I Y + + + + F +++ + N+L+ + + A +Y +M
Sbjct: 116 RAIILYGRANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKM 175
Query: 354 HGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQE 413
+G PD+ T+ +I C G + + EM + I + +F ++I K + E
Sbjct: 176 YGIEPDLETYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDE 235
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE-MEEKCKPDKFTFTILIA 472
R ++R + + + YN +I CK EA A++ M + +P+ T+++LI
Sbjct: 236 VRKVMRMMDEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIH 295
Query: 473 GHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI--KESLHEN 528
G C + +A+ +F M+ G PD L CL K G E A I +ES+ +N
Sbjct: 296 GFCSEENLDEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGG-DFETALILCRESMEKN 352
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 186/418 (44%), Gaps = 22/418 (5%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELL 172
S YN +L+SL + L+ +R G PD+ L ++ S + ++ +++
Sbjct: 10 SLLMYNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVH 69
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
A ++ ++ V ++L+ + K++ +F E+ + ++N L+
Sbjct: 70 GYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEM----PQRDVVSWNGLISSYVGN 125
Query: 233 GDVDEAFKFLNGM-RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
G ++A M + D T + L +K ++ + + V ++F +VR
Sbjct: 126 GRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFV--VTEFEMSVR 183
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
++ +CK + +A ++FD M N + S++ G+V G +D A ++
Sbjct: 184 IGNALVDMFCKCGCLDKARAVFDSM----RDKNVKCWTSMVFGYVSTGRIDEA-----RV 234
Query: 352 LFHGCP-PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
LF P DVV +T+++ GY + + + L+L+ M T I L++ ++
Sbjct: 235 LFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGA 294
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTIL 470
L++ + + + + + ++D Y K G ++ A + E++E+ D ++T L
Sbjct: 295 LEQGKWIHGYINENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKER---DTASWTSL 351
Query: 471 IAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCLLKSGMPGEAARIKESLHE 527
I G M G + A+ ++Y+M G D IT V +L++C G E +I S+ E
Sbjct: 352 IYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLTAC-NHGGFVAEGRKIFHSMTE 408
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/325 (22%), Positives = 135/325 (41%), Gaps = 16/325 (4%)
Query: 183 NAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFL 242
N + +++ V ++D+A LF RS + + +M G DEA +
Sbjct: 212 NVKCWTSMVFGYVSTGRIDEARVLFE---RSPVK-DVVLWTAMMNGYVQFNRFDEALELF 267
Query: 243 NGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCK 302
M++ G PD +LL G + +++ + + + +++ + + T ++ Y K
Sbjct: 268 RCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN-ENRVTVDKVVGTALVDMYAK 326
Query: 303 LSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVT 362
++ A +F E+ T ++ SLI G G AL +Y +M G D +T
Sbjct: 327 CGCIETALEVFYEIKERDTA----SWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAIT 382
Query: 363 FTSLIEGYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLISYLCKSNRLQEARDLLRQL 421
F +++ G V G ++H M R N+ S LI LC++ L EA +L+ ++
Sbjct: 383 FVAVLTACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKM 442
Query: 422 KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAP 481
+ +Y ++ GNV A + ++E+ D T+L + + R
Sbjct: 443 RGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWE 502
Query: 482 DAIVIFYKMLA------TGCSPDEI 500
D + KM GCS EI
Sbjct: 503 DVTNVRRKMKDLGIRKFPGCSSIEI 527
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 111/501 (22%), Positives = 209/501 (41%), Gaps = 91/501 (18%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K F+ RE+ VH WT ++ + G+ A L + MRF G P L ++S
Sbjct: 102 KVFEEMRERDVVH---WT--AMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG 156
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
+ +L + A + V +++L++ K + + DA LF ++ + +
Sbjct: 157 VLEITQLQCLHDF---AVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQR----D 209
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNT---------------LLHG 263
++N ++ G S G++ E K L MR G PD T+ +LH
Sbjct: 210 MVSWNTMISGYASVGNMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLH- 268
Query: 264 LCRIKEVDRARDLLKEVGLKSKF-----------------SPNVRSYTTVISGYCKLSKM 306
C+I + D+ + L + + + +V +T +ISG +L +
Sbjct: 269 -CQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRA 327
Query: 307 KEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSL 366
++A +F EM +SG+ ++ S++ ++G+ D ++ +L HG D SL
Sbjct: 328 EKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSL 387
Query: 367 IEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK---- 422
I Y + G ++ L ++ MN R+ L +++ +IS ++ L +A L ++K
Sbjct: 388 ITMYAKCGHLDKSLVIFERMNERD----LVSWNAIISGYAQNVDLCKALLLFEEMKFKTV 443
Query: 423 --------------------------------RTDIVPQPSIYNHVIDGYCKSGNVDEAN 450
R+ I P + ++D Y K G ++ A
Sbjct: 444 QQVDSFTVVSLLQACSSAGALPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQ 503
Query: 451 AIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCL 509
+ K D ++ ILIAG+ G+ A+ I+ + L +G P+ + + +LSSC
Sbjct: 504 RCFDSISWK---DVVSWGILIAGYGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSC- 559
Query: 510 LKSGMPGEAARIKESLHENQG 530
+GM + +I S+ + G
Sbjct: 560 SHNGMVQQGLKIFSSMVRDFG 580
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 157/393 (39%), Gaps = 51/393 (12%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N + L G H + M + LPD+ L+ + A + RL + +
Sbjct: 14 FNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVL 73
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
N + + +L+++ K L A +F E MR + + ++G AG V
Sbjct: 74 VNGFSSDFYISSSLVNLYAKFGLLAHARKVFEE-MRER---DVVHWTAMIGCYSRAGIVG 129
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA +N MR G P VT +L G+ I ++ D G F ++ ++
Sbjct: 130 EACSLVNEMRFQGIKPGPVTLLEMLSGVLEITQLQCLHDFAVIYG----FDCDIAVMNSM 185
Query: 297 ISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGC 356
++ YCK + +A LFD+M++ + ++N++I G+ VGNM L + +M G
Sbjct: 186 LNLYCKCDHVGDAKDLFDQMEQR----DMVSWNTMISGYASVGNMSEILKLLYRMRGDGL 241
Query: 357 PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARD 416
PD TF + + + + G L ++ +H + LI+ K + + +
Sbjct: 242 RPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYR 301
Query: 417 LLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCM 476
+L + D+V +T++I+G
Sbjct: 302 VLETIPNKDVV--------------------------------------CWTVMISGLMR 323
Query: 477 KGRAPDAIVIFYKMLATGCS-PDEITVRILSSC 508
GRA A+++F +ML +G E +++SC
Sbjct: 324 LGRAEKALIVFSEMLQSGSDLSSEAIASVVASC 356
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 183/409 (44%), Gaps = 59/409 (14%)
Query: 124 LCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVN 183
LC++GL +L++ MR + L + G L+ + + L K + ++++
Sbjct: 222 LCEEGL-----VLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELS 276
Query: 184 AVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLN 243
+ + +LL + VK + +A R + HSH++ + ++ G G V+EA
Sbjct: 277 SCLVTSLLDMYVKCGDISNA----RRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 244 GMRSFGCSPDIVTYNTLLHGLCRIKEVDRARD---LLKEVGLKSKFSPNVRSYTTVISGY 300
M+ P+ VT ++L G I+ ++ R L +VG+ + NV + ++ Y
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGI---WDTNVAN--ALVHMY 387
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
K + ++A +F EM+ ++ + +NS+I GF + G++ AL ++ +M P+
Sbjct: 388 AKCYQNRDAKYVF-EME---SEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNG 443
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQ 420
VT SL +G + G +SLH +SV + +L S+
Sbjct: 444 VTVASLFSACASLGSLAVG-------------SSLHAYSVKLGFLASSS----------- 479
Query: 421 LKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRA 480
+ ++D Y K G+ A I +EEK + T++ +I G+ +G
Sbjct: 480 ---------VHVGTALLDFYAKCGDPQSARLIFDTIEEK---NTITWSAMIGGYGKQGDT 527
Query: 481 PDAIVIFYKMLATGCSPDEIT-VRILSSCLLKSGMPGEAARIKESLHEN 528
++ +F +ML P+E T ILS+C +GM E + S++++
Sbjct: 528 IGSLELFEEMLKKQQKPNESTFTSILSAC-GHTGMVNEGKKYFSSMYKD 575
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 112/263 (42%), Gaps = 16/263 (6%)
Query: 252 PDIVTYNTLLHGLCRIKE---VDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
PD + +L C KE V + DLL +K F + ++ + +L +
Sbjct: 105 PDFYLWKVMLRCYCLNKESVEVVKLYDLL----MKHGFRYDDIVFSKALKACTELQDLDN 160
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
+ ++ + + N L+D + K G + SA ++ + +VV +TS+I
Sbjct: 161 GKKIHCQLVKVPSFDNV-VLTGLLDMYAKCGEIKSAHKVFNDITLR----NVVCWTSMIA 215
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
GY + GL L++ M N+ + +T+ LI K + L + + L ++ I
Sbjct: 216 GYVKNDLCEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIEL 275
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
+ ++D Y K G++ A + E D +T +I G+ G +A+ +F
Sbjct: 276 SSCLVTSLLDMYVKCGDISNARRV---FNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQ 332
Query: 489 KMLATGCSPDEITV-RILSSCLL 510
KM P+ +T+ +LS C L
Sbjct: 333 KMKGVEIKPNCVTIASVLSGCGL 355
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 136/292 (46%), Gaps = 13/292 (4%)
Query: 218 ETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL 277
+T +N+++ G + + + + M + T+ +LL + + +
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 278 KEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVK 337
++ K + +V + ++I+ Y K A LFD + +P+ ++NS+I G+VK
Sbjct: 139 AQI-TKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRI----PEPDDVSWNSVIKGYVK 193
Query: 338 VGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHT 397
G MD AL +++KM + +++T++I GY + L L+HEM ++ +
Sbjct: 194 AGKMDIALTLFRKM----AEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVS 249
Query: 398 FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME 457
+ +S + L++ + + L +T I + +ID Y K G ++EA + ++
Sbjct: 250 LANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK 309
Query: 458 EKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
+K +T LI+G+ G +AI F +M G P+ IT +L++C
Sbjct: 310 KKSVQ---AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTAC 358
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 87/379 (22%), Positives = 159/379 (41%), Gaps = 54/379 (14%)
Query: 131 SSAKLLYDCMRFDG-KLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDN 189
SS L Y + FDG PD+ L ++ F+ D + S L C+ NA + +
Sbjct: 61 SSDFLPYAQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPS 120
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
LL + ++ + ++ + + N L+ G+ FK + +
Sbjct: 121 LLKACSNLSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGN----FKLAHLLFDRI 176
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
PD V++N+++ G + ++D A L +++ K N S+TT+ISGY + KEA
Sbjct: 177 PEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK-----NAISWTTMISGYVQADMNKEA 231
Query: 310 SSLFDEMDRSGTKPNAFTFNS-----------------------------------LIDG 334
LF EM S +P+ + + LID
Sbjct: 232 LQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDM 291
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
+ K G M+ AL ++K + V +T+LI GY G + + EM I +
Sbjct: 292 YAKCGEMEEALEVFKNIK----KKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPN 347
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI--YNHVIDGYCKSGNVDEANAI 452
+ TF+ +++ + ++E + + ++R D +P+I Y ++D ++G +DEA
Sbjct: 348 VITFTAVLTACSYTGLVEEGKLIFYSMER-DYNLKPTIEHYGCIVDLLGRAGLLDEAKRF 406
Query: 453 VVEMEEKCKPDKFTFTILI 471
+ EM KP+ + L+
Sbjct: 407 IQEM--PLKPNAVIWGALL 423
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/217 (17%), Positives = 91/217 (41%), Gaps = 7/217 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++ ++ Q ++ A L+ M+ PD+ L +S+ A + L+ K + +
Sbjct: 214 SWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYL 273
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
++++++V+ L+ + K ++++A+ +F+ + + + L+ G G
Sbjct: 274 NKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKK----SVQAWTALISGYAYHGHG 329
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA M+ G P+++T+ +L V+ + + + P + Y
Sbjct: 330 REAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGC 389
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLI 332
++ + + EA EM KPNA + +L+
Sbjct: 390 IVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALL 423
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/403 (20%), Positives = 166/403 (41%), Gaps = 47/403 (11%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
+N ++R + A L+Y M+ PDS L+ + + + L + + + A+
Sbjct: 87 WNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVF 146
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
+ V + L+++ K +L A +F L + ++ ++ G+
Sbjct: 147 RLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTI--VSWTAIVSAYAQNGEPM 204
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKE-VGLKSKFSPNVRSYTT 295
EA + + MR PD V ++L+ ++++ + R + V + + P++ +
Sbjct: 205 EALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL--LIS 262
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
+ + Y K ++ A LFD+M PN +N++I G+ K G A+ ++ +M+
Sbjct: 263 LNTMYAKCGQVATAKILFDKM----KSPNLILWNAMISGYAKNGYAREAIDMFHEMINKD 318
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEAR 415
PD ++ TS I +VG L++AR
Sbjct: 319 VRPDTISITSAISACAQVGS-----------------------------------LEQAR 343
Query: 416 DLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHC 475
+ + R+D I + +ID + K G+V+ A + + D ++ +I G+
Sbjct: 344 SMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV---FDRTLDRDVVVWSAMIVGYG 400
Query: 476 MKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEA 518
+ GRA +AI ++ M G P+++T L SGM E
Sbjct: 401 LHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREG 443
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 124/262 (47%), Gaps = 15/262 (5%)
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
P I +N ++ G R A + + L ++ SP+ ++ ++ LS ++
Sbjct: 82 PQIFPWNAIIRGYSRNNHFQDALLMYSNMQL-ARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP-PD--VVTFTSLIE 368
+ ++ R G + F N LI + K + SA + +F G P P+ +V++T+++
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSA-----RTVFEGLPLPERTIVSWTAIVS 195
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISAS-LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
Y + G+ L+++ +M ++ + SVL ++ C + L++ R + + + +
Sbjct: 196 AYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQD-LKQGRSIHASVVKMGLE 254
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
+P + + Y K G V A + +M+ P+ + +I+G+ G A +AI +F
Sbjct: 255 IEPDLLISLNTMYAKCGQVATAKILFDKMK---SPNLILWNAMISGYAKNGYAREAIDMF 311
Query: 488 YKMLATGCSPDEITV-RILSSC 508
++M+ PD I++ +S+C
Sbjct: 312 HEMINKDVRPDTISITSAISAC 333
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 137/300 (45%), Gaps = 13/300 (4%)
Query: 223 NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGL 282
N L+ G S+G D A + +G D+VT+ ++ G R A E+
Sbjct: 142 NSLISGYSSSGLFDFASRLFDGAED----KDVVTWTAMIDGFVRNGSASEAMVYFVEMK- 196
Query: 283 KSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSG-TKPNAFTFNSLIDGFVKVGNM 341
K+ + N + +V+ K+ ++ S+ +G K + F +SL+D + K
Sbjct: 197 KTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCY 256
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
D A ++ +M +VVT+T+LI GY + + G+ ++ EM +++ + T S +
Sbjct: 257 DDAQKVFDEM----PSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSV 312
Query: 402 ISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCK 461
+S L R + + + I + +ID Y K G ++EA + + EK
Sbjct: 313 LSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEK-- 370
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
+ +T+T +I G G A DA +FY ML++ SP+E+T + S G+ E R+
Sbjct: 371 -NVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRL 429
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 122/303 (40%), Gaps = 71/303 (23%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARD---LL 277
T+ ++ G G EA + M+ G + + +T ++L ++++V R L
Sbjct: 171 TWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLY 230
Query: 278 KEVG----------------------------LKSKFSPNVRSYTTVISGYCKLSKMKEA 309
E G S NV ++T +I+GY + +
Sbjct: 231 LETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKG 290
Query: 310 SSLFDEMDRSGTKPNAFTFNS-----------------------------------LIDG 334
+F+EM +S PN T +S LID
Sbjct: 291 MLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDL 350
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
+VK G ++ A+ +++++ +V T+T++I G+ G DL++ M + ++S +
Sbjct: 351 YVKCGCLEEAILVFERLH----EKNVYTWTAMINGFAAHGYARDAFDLFYTMLSSHVSPN 406
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLK-RTDIVPQPSIYNHVIDGYCKSGNVDEANAIV 453
TF ++S ++E R L +K R ++ P+ Y ++D + + G ++EA A++
Sbjct: 407 EVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKGLLEEAKALI 466
Query: 454 VEM 456
M
Sbjct: 467 ERM 469
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
T+ L+ Q L+++ M P+ + L ++S+ A V L + +
Sbjct: 273 TWTALIAGYVQSRCFDKGMLVFEEMLKSDVAPNEKTLSSVLSACAHVGALHRGRRVHCYM 332
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N +++N L+ + VK L++AI +F L + + T+ ++ G + G
Sbjct: 333 IKNSIEINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVY----TWTAMINGFAAHGYA 388
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+AF M S SP+ VT+ +L V+ R L + + P Y
Sbjct: 389 RDAFDLFYTMLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYAC 448
Query: 296 VISGYCKLSKMKEASSLFDEM 316
++ + + ++EA +L + M
Sbjct: 449 MVDLFGRKGLLEEAKALIERM 469
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 68/147 (46%), Gaps = 14/147 (9%)
Query: 383 WHEMNTRNISASLHTFSVLISYLCK---SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+ M + S HTF L+ + K SN Q +++ +D P + N +I G
Sbjct: 92 YRHMRRNGVIPSRHTFPPLLKAVFKLRDSNPFQFHAHIVKFGLDSD----PFVRNSLISG 147
Query: 440 YCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
Y SG D A+ + E+K D T+T +I G G A +A+V F +M TG + +E
Sbjct: 148 YSSSGLFDFASRLFDGAEDK---DVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANE 204
Query: 500 ITVRILSSCLLKSGMPGEAARIKESLH 526
+TV +LK+ E R S+H
Sbjct: 205 MTV----VSVLKAAGKVEDVRFGRSVH 227
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/359 (23%), Positives = 158/359 (44%), Gaps = 22/359 (6%)
Query: 91 LNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSR 150
L +P F+ + E+ + + N L+R L + S+ + M G PD
Sbjct: 73 LKSPDYSLSIFRNSEER-----NPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRL 127
Query: 151 LLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFREL 210
F++ S + + + + L A N V ++ V +L+ + K +L A +F E
Sbjct: 128 TFPFVLKSNSKLGFRWLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEES 187
Query: 211 MRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM--RSFGCSPDIVTYNTLLHGLCRIK 268
+NVL+ G C A D+ A M R+ G +++TL+ G
Sbjct: 188 PDRIKKESILIWNVLINGYCRAKDMHMATTLFRSMPERNSG------SWSTLIKGYVDSG 241
Query: 269 EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTF 328
E++RA+ L + + K NV S+TT+I+G+ + + A S + EM G KPN +T
Sbjct: 242 ELNRAKQLFELMPEK-----NVVSWTTLINGFSQTGDYETAISTYFEMLEKGLKPNEYTI 296
Query: 329 NSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNT 388
+++ K G + S + I+ +L +G D T+L++ Y + G+++ ++ MN
Sbjct: 297 AAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNMNH 356
Query: 389 RNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
++I +++ +I R +A RQ+ + P ++ V+ S VD
Sbjct: 357 KDIL----SWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSSEVD 411
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 105/234 (44%), Gaps = 7/234 (2%)
Query: 295 TVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
+I G + ++ + + F M R G KP+ TF ++ K+G ++ L +
Sbjct: 96 ALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRALHAATLKN 155
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA 414
D SL++ Y + G++ + ++ E R S+ ++VLI+ C++ + A
Sbjct: 156 FVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCRAKDMHMA 215
Query: 415 RDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGH 474
L R + + ++ +I GY SG ++ A + M EK + ++T LI G
Sbjct: 216 TTLFRSMPERN----SGSWSTLIKGYVDSGELNRAKQLFELMPEK---NVVSWTTLINGF 268
Query: 475 CMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKESLHEN 528
G AI +++ML G P+E T+ + S KSG G RI + +N
Sbjct: 269 SQTGDYETAISTYFEMLEKGLKPNEYTIAAVLSACSKSGALGSGIRIHGYILDN 322
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 124/261 (47%), Gaps = 17/261 (6%)
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
PD T+ +L R+ +V R + +V + F +V T +I Y + +A
Sbjct: 114 PDTFTFPFVLKIAVRVSDVWFGRQIHGQV-VVFGFDSSVHVVTGLIQMYFSCGGLGDARK 172
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV---VTFTSLIE 368
+FDEM + +N+L+ G+ KVG MD A + + M P V V++T +I
Sbjct: 173 MFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLEMM-----PCWVRNEVSWTCVIS 223
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVP 428
GY + G+ + ++++ M N+ T ++S L+ + + +
Sbjct: 224 GYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNR 283
Query: 429 QPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFY 488
S+ N VID Y KSGN+ +A + + E+ + T+T +IAG G +A+ +F
Sbjct: 284 AVSLNNAVIDMYAKSGNITKALDVFECVNER---NVVTWTTIIAGLATHGHGAEALAMFN 340
Query: 489 KMLATGCSPDEIT-VRILSSC 508
+M+ G P+++T + ILS+C
Sbjct: 341 RMVKAGVRPNDVTFIAILSAC 361
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 9/190 (4%)
Query: 323 PNAFTFNSLIDGFVKVGNMDS---ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYG 379
PN + N++I + ++ A+ +Y+K+ PD TF +++ RV V +G
Sbjct: 76 PNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKIAVRVSDVWFG 135
Query: 380 LDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDG 439
+ ++ +S+H + LI L +AR + ++ D+ +++N ++ G
Sbjct: 136 RQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDV----NVWNALLAG 191
Query: 440 YCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDE 499
Y K G +DEA +++ EM ++ ++T +I+G+ GRA +AI +F +ML PDE
Sbjct: 192 YGKVGEMDEARSLL-EMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDE 250
Query: 500 IT-VRILSSC 508
+T + +LS+C
Sbjct: 251 VTLLAVLSAC 260
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 111/259 (42%), Gaps = 15/259 (5%)
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
S G + +A K + M D+ +N LL G ++ E+D AR LL+ + + N
Sbjct: 163 SCGGLGDARKMFDEM----LVKDVNVWNALLAGYGKVGEMDEARSLLE---MMPCWVRNE 215
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
S+T VISGY K + EA +F M +P+ T +++ +G+++ I
Sbjct: 216 VSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVLSACADLGSLELGERICSY 275
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNR 410
+ G V ++I+ Y + G + LD++ +N RN+ T++ +I+ L
Sbjct: 276 VDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV----TWTTIIAGLATHGH 331
Query: 411 LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKP--DKFT 466
EA + ++ + + P + ++ G VD + M K P + +
Sbjct: 332 GAEALAMFNRMVKAGVRPNDVTFIAILSACSHVGWVDLGKRLFNSMRSKYGIHPNIEHYG 391
Query: 467 FTILIAGHCMKGRAPDAIV 485
I + G K R D ++
Sbjct: 392 CMIDLLGRAGKLREADEVI 410
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 135/283 (47%), Gaps = 13/283 (4%)
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
L V + + A+ K +V+ VVY+ LL + ++ DDA R++ S T+N
Sbjct: 252 LRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA----RKVFDGMSERNVVTWNS 307
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ L V E F M+ T T+L R+ + +++ ++ LKS
Sbjct: 308 LISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQI-LKS 366
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
K P+V +++ Y K +++ + +FD M + ++N +++ + GN++
Sbjct: 367 KEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVM----LTKDLASWNIMLNCYAINGNIEEV 422
Query: 345 LGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLIS 403
+ +++ M+ G PD +TF +L+ G G YGL L+ M T +S +L ++ L+
Sbjct: 423 INLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVD 482
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNV 446
L ++ +++EA ++ ++ P SI+ +++ GNV
Sbjct: 483 ILGRAGKIKEA---VKVIETMPFKPSASIWGSLLNSCRLHGNV 522
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 151/356 (42%), Gaps = 53/356 (14%)
Query: 194 LVKHNKLDDAICLFRELMRSHSHLET-STFNVLMGGLCSAGDVDEAFKF----LNGMRSF 248
L K KLD+A+ L S S+L T + L+ SA + K LN S
Sbjct: 105 LSKSTKLDEAVTLIENSSSSPSNLSTPEAYTDLLHACISAKSLHHGIKICSLILNN-PSL 163
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
+P +++ L +CR +D AR + +V S + V + + GY + ++
Sbjct: 164 RHNPKLLSKLITLFSVCR--RLDLARKIFDDVTDSSLLTEKV--WAAMAIGYSRNGSPRD 219
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
A ++ +M S +P F+ + + V + ++ GI+ +++ D V + L++
Sbjct: 220 ALIVYVDMLCSFIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLK 279
Query: 369 GYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR----- 423
Y G + ++ M+ RN+ T++ LIS L K R+ E +L R+++
Sbjct: 280 LYMESGLFDDARKVFDGMSERNVV----TWNSLISVLSKKVRVHEMFNLFRKMQEEMIGF 335
Query: 424 -----TDIVPQPS-------------------------IYNHVIDGYCKSGNVDEANAIV 453
T I+P S + N ++D Y K G V+ + +
Sbjct: 336 SWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVF 395
Query: 454 VEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
M K D ++ I++ + + G + I +F M+ +G +PD IT V +LS C
Sbjct: 396 DVMLTK---DLASWNIMLNCYAINGNIEEVINLFEWMIESGVAPDGITFVALLSGC 448
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/463 (20%), Positives = 181/463 (39%), Gaps = 84/463 (18%)
Query: 102 QFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFAL 161
+F V+H +N L+RS G + L+ M PD+ F+ +
Sbjct: 84 RFPPSDAGVYH----WNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGE 139
Query: 162 VDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETST 221
+ + + A + N V + L+++ + L DA +F E+ S + +
Sbjct: 140 ISSVRCGESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM----SVWDVVS 195
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGM-RSFGCSPDIVTY----------------------- 257
+N ++ G A + + M FGC PD +T
Sbjct: 196 WNSIIESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFA 255
Query: 258 ------------NTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
N L+ + +D A + + +K +V S+ +++GY ++ +
Sbjct: 256 VTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVK-----DVVSWNAMVAGYSQIGR 310
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTS 365
++A LF++M K + T+++ I G+ + G ALG+ ++ML G P+ VT S
Sbjct: 311 FEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLIS 370
Query: 366 LIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTD 425
++ G VG + +G + +H +++ L++
Sbjct: 371 VLSGCASVGALMHGKE-------------IHCYAIKYPI---------------DLRKNG 402
Query: 426 IVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIV 485
+ + N +ID Y K VD A A+ + K + D T+T++I G+ G A A+
Sbjct: 403 HGDENMVINQLIDMYAKCKKVDTARAMFDSLSPK-ERDVVTWTVMIGGYSQHGDANKALE 461
Query: 486 IFYKMLATGCS--PDEITVRILSSCLLKSGMPGEAARIKESLH 526
+ +M C P+ T+ SC L + A RI + +H
Sbjct: 462 LLSEMFEEDCQTRPNAFTI----SCALVACASLAALRIGKQIH 500
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 167/414 (40%), Gaps = 33/414 (7%)
Query: 88 VKRLNNPILGFKFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLP 147
+ R + + F+ Q + K++V T++ + Q+GL A + M G P
Sbjct: 308 IGRFEDAVRLFEKMQEEKIKMDVV----TWSAAISGYAQRGLGYEALGVCRQMLSSGIKP 363
Query: 148 DSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNA-------VVYDNLLSVLVKHNKL 200
+ L ++S A V L KE+ A + + +V + L+ + K K+
Sbjct: 364 NEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV 423
Query: 201 DDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS--PDIVTYN 258
D A +F L S + T+ V++GG GD ++A + L+ M C P+ T +
Sbjct: 424 DTARAMFDSL--SPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTIS 481
Query: 259 TLLHGLC-----RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLF 313
L RI + A L + F N +I Y K + +A +F
Sbjct: 482 CALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNC-----LIDMYAKCGSISDARLVF 536
Query: 314 DEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRV 373
D M N T+ SL+ G+ G + ALGI+ +M G D VT ++
Sbjct: 537 DNM----MAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHS 592
Query: 374 GKVNYGLDLWHEMNTR-NISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSI 432
G ++ G++ ++ M T +S ++ L+ L ++ RL A LR ++ + P P +
Sbjct: 593 GMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA---LRLIEEMPMEPPPVV 649
Query: 433 YNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVI 486
+ + G V+ ++ E ++T+L + GR D I
Sbjct: 650 WVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRI 703
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/428 (21%), Positives = 176/428 (41%), Gaps = 109/428 (25%)
Query: 177 CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVD 236
C+ + NAV Y +++ V+ + D+A L+ E ++ NVL+ G AG +
Sbjct: 137 CDIPEKNAVSYATMITGFVRAGRFDEAEFLYAE--TPVKFRDSVASNVLLSGYLRAGKWN 194
Query: 237 EAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTV 296
EA + GM ++V+ ++++HG C++ + AR L + + NV ++T +
Sbjct: 195 EAVRVFQGM----AVKEVVSCSSMVHGYCKMGRIVDARSLFDRMTER-----NVITWTAM 245
Query: 297 ISGYCKLSKMKEASSLFDEMDRSG-TKPNA------------------------------ 325
I GY K ++ LF M + G K N+
Sbjct: 246 IDGYFKAGFFEDGFGLFLRMRQEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMP 305
Query: 326 -----FTFNSLIDGFVKVGNMDSALGIYKKM--------------------------LFH 354
F NSL+ + K+G M A ++ M LF
Sbjct: 306 LEFDLFLGNSLMSMYSKLGYMGEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFE 365
Query: 355 GCP-PDVVTFTSLIEGYCRVGKVNYGLDL-----------W------------------- 383
P D+V++T +I+G+ G+++ ++L W
Sbjct: 366 KMPGKDMVSWTDMIKGFSGKGEISKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCW 425
Query: 384 -HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCK 442
H+M + + + +TFS ++S L E + ++ + +IV S+ N ++ YCK
Sbjct: 426 FHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCK 485
Query: 443 SGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT- 501
GN ++A I + E P+ ++ +I+G+ G A+ +F + ++G P+ +T
Sbjct: 486 CGNTNDAYKIFSCISE---PNIVSYNTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTF 542
Query: 502 VRILSSCL 509
+ +LS+C+
Sbjct: 543 LALLSACV 550
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 156/356 (43%), Gaps = 71/356 (19%)
Query: 187 YDNLLSVLVKHN-KLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
Y+ +++ ++K+ L A LF ++ ++ ++ ++ G AG DEA +FL
Sbjct: 115 YNAMITAMIKNKCDLGKAYELFCDIPEKNA----VSYATMITGFVRAGRFDEA-EFL--- 166
Query: 246 RSFGCSP----DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYC 301
+ +P D V N LL G R + + A + + + +K V S ++++ GYC
Sbjct: 167 --YAETPVKFRDSVASNVLLSGYLRAGKWNEAVRVFQGMAVKE-----VVSCSSMVHGYC 219
Query: 302 KLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM---------- 351
K+ ++ +A SLFD M T+ N T+ ++IDG+ K G + G++ +M
Sbjct: 220 KMGRIVDARSLFDRM----TERNVITWTAMIDGYFKAGFFEDGFGLFLRMRQEGDVKVNS 275
Query: 352 -----LFHGCPP---------------------DVVTFTSLIEGYCRVGKVNYGLDLWHE 385
+F C D+ SL+ Y ++G + ++
Sbjct: 276 NTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGV 335
Query: 386 MNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGN 445
M ++ S S ++ LI+ L + ++ EA +L ++ D+V + +I G+ G
Sbjct: 336 MKNKD-SVSWNS---LITGLVQRKQISEAYELFEKMPGKDMVS----WTDMIKGFSGKGE 387
Query: 446 VDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
+ + + M EK D T+T +I+ G +A+ F+KML P+ T
Sbjct: 388 ISKCVELFGMMPEK---DNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYT 440
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 105/238 (44%), Gaps = 17/238 (7%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGF--LVSSFALVDRLDVSKELLA 173
++N L+ L Q+ S A L++ K+P ++ + ++ F+ + EL
Sbjct: 343 SWNSLITGLVQRKQISEAYELFE------KMPGKDMVSWTDMIKGFSGKGEISKCVELFG 396
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
+ + + + ++S V + ++A+C F ++++ + TF+ ++ S
Sbjct: 397 MMP----EKDNITWTAMISAFVSNGYYEEALCWFHKMLQKEVCPNSYTFSSVLSATASLA 452
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSY 293
D+ E + + D+ N+L+ C+ + A + + PN+ SY
Sbjct: 453 DLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCIS-----EPNIVSY 507
Query: 294 TTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKM 351
T+ISGY K+A LF ++ SG +PN TF +L+ V VG +D +K M
Sbjct: 508 NTMISGYSYNGFGKKALKLFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSM 565
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/339 (20%), Positives = 146/339 (43%), Gaps = 67/339 (19%)
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
+S ++ L +A +FR++ S+ ++ ++ G + +A++ + M
Sbjct: 57 ISKHARNGNLQEAEAIFRQM----SNRSIVSWIAMISAYAENGKMSKAWQVFDEM----- 107
Query: 251 SPDIVT--YNTLLHGLCRIK-EVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMK 307
P VT YN ++ + + K ++ +A +L ++ K N SY T+I+G+ + +
Sbjct: 108 -PVRVTTSYNAMITAMIKNKCDLGKAYELFCDIPEK-----NAVSYATMITGFVRAGRFD 161
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
EA L+ E ++ N L+ G+++ G + A+ +++ M +VV+ +S++
Sbjct: 162 EAEFLYAETPVKFR--DSVASNVLLSGYLRAGKWNEAVRVFQGMAVK----EVVSCSSMV 215
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEA------------- 414
GYC++G++ L+ M RN+ T++ +I K+ ++
Sbjct: 216 HGYCKMGRIVDARSLFDRMTERNVI----TWTAMIDGYFKAGFFEDGFGLFLRMRQEGDV 271
Query: 415 --------------RDLLRQLKRTDIVPQPS---------IYNHVIDGYCKSGNVDEANA 451
RD +R + + I S + N ++ Y K G + EA A
Sbjct: 272 KVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKA 331
Query: 452 IVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKM 490
+ M+ K D ++ LI G + + +A +F KM
Sbjct: 332 VFGVMKNK---DSVSWNSLITGLVQRKQISEAYELFEKM 367
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/348 (20%), Positives = 154/348 (44%), Gaps = 8/348 (2%)
Query: 111 HHSFWTYNMLLRSLCQKGLHSSAKLLYDCMR-FDGKLPDSRLLGFLVSSFALVDRLDVSK 169
H S TYN + L + G+ + +++ MR F + P+ +++ A + L +
Sbjct: 192 HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
Query: 170 ELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGL 229
+L + Q +V L+ + K A +F EL + + + ++N ++ G+
Sbjct: 252 QLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLI---SWNSVISGM 308
Query: 230 CSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPN 289
G + A + + S G PD T+N+L+ G ++ +V A + + L P+
Sbjct: 309 MINGQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERM-LSVVMVPS 367
Query: 290 VRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYK 349
++ T+++S + +K + + ++ + + F SLID ++K G A I+
Sbjct: 368 LKCLTSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFD 427
Query: 350 KMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSN 409
+ F P D V + +I GY + G+ ++++ + + SL TF+ ++S
Sbjct: 428 R--FEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHCG 485
Query: 410 RLQEARDLLRQLKRT-DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
+++ + R ++ P +ID +SG + EA ++ +M
Sbjct: 486 NVEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 138/347 (39%), Gaps = 42/347 (12%)
Query: 216 HLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCS-PDIVT---------------YNT 259
H T+N + GL G ++ N MR F P+ VT Y
Sbjct: 192 HKSVVTYNAFISGLMENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGR 251
Query: 260 LLHGLCRIKEVD----------------RARDLLKEVGLKSKFSPNVRSYTTVISGYCKL 303
LHGL KE R V + K + N+ S+ +VISG
Sbjct: 252 QLHGLVMKKEFQFETMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMIN 311
Query: 304 SKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTF 363
+ + A LF+++D G KP++ T+NSLI GF ++G + A +++ML P +
Sbjct: 312 GQHETAVELFEKLDSEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMVPSLKCL 371
Query: 364 TSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKR 423
TSL+ + + G ++ + + + LI K AR R R
Sbjct: 372 TSLLSACSDIWTLKNGKEIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWAR---RIFDR 428
Query: 424 TDIVPQ-PSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCKPDKFTFTILIAG--HCMKGR 479
+ P+ P +N +I GY K G + A I + EEK +P TFT +++ HC G
Sbjct: 429 FEPKPKDPVFWNVMISGYGKHGECESAIEIFELLREEKVEPSLATFTAVLSACSHC--GN 486
Query: 480 APDAIVIFYKMLAT-GCSPDEITVRILSSCLLKSGMPGEAARIKESL 525
IF M G P + + L +SG EA + + +
Sbjct: 487 VEKGSQIFRLMQEEYGYKPSTEHIGCMIDLLGRSGRLREAKEVIDQM 533
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 217 LETSTF--NVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRAR 274
LE +F N ++ + G + EA++ GM F D+V +N+++ G + +D+A+
Sbjct: 157 LEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGF----DVVAWNSMIMGFAKCGLIDQAQ 212
Query: 275 DLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
+L E+ + N S+ ++ISG+ + + K+A +F EM KP+ FT SL++
Sbjct: 213 NLFDEMPQR-----NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNA 267
Query: 335 FVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISAS 394
+G + I++ ++ + + + T+LI+ YC+ G + GL+++ + +S
Sbjct: 268 CAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSC- 326
Query: 395 LHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVV 454
++ +I L + + A DL +L+R+ + P + V+ SG V A+
Sbjct: 327 ---WNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFR 383
Query: 455 EMEEK--CKPDKFTFTILI 471
M+EK +P +T+++
Sbjct: 384 LMKEKYMIEPSIKHYTLMV 402
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 86/188 (45%), Gaps = 10/188 (5%)
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG--CPPDVVTFTSLIEGYCRVGKVNYGLD 381
N F +N++I GF + + A+ I+ ML P +T+ S+ + Y R+G+ G
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
L + + + ++ L EA + + D+V +N +I G+
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVA----WNSMIMGFA 203
Query: 442 KSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
K G +D+A + EM ++ + ++ +I+G GR DA+ +F +M PD T
Sbjct: 204 KCGLIDQAQNLFDEMPQR---NGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFT 260
Query: 502 -VRILSSC 508
V +L++C
Sbjct: 261 MVSLLNAC 268
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/229 (18%), Positives = 102/229 (44%), Gaps = 7/229 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++N ++ + G A ++ M+ PD + L+++ A + + + +
Sbjct: 225 SWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEYI 284
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N+ ++N++V L+ + K +++ + +F + S +N ++ GL + G
Sbjct: 285 VRNRFELNSIVVTALIDMYCKCGCIEEGLNVFE----CAPKKQLSCWNSMILGLANNGFE 340
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ A + + G PD V++ +L EV RA + + + K P+++ YT
Sbjct: 341 ERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLMKEKYMIEPSIKHYTL 400
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
+++ ++EA +L M + + ++SL+ K+GN++ A
Sbjct: 401 MVNVLGGAGLLEEAEALIKNMP---VEEDTVIWSSLLSACRKIGNVEMA 446
>AT3G25210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9180348-9181487 FORWARD
LENGTH=379
Length = 379
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 105/220 (47%), Gaps = 9/220 (4%)
Query: 249 GCSPDIVTYNTLLHGLCRIKEV-DRARDLLKEVGLKSKFSPNVRSYTTVISGYCK-LSKM 306
C + YN ++ C K + +RA D+ ++ P++ +YT ++S K +K+
Sbjct: 138 ACEMSVPLYNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKL 197
Query: 307 K-------EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPD 359
SL +M +G P+ F N +I + K +D A+ ++K+M +G P+
Sbjct: 198 NVCYVYLHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPN 257
Query: 360 VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLR 419
T++ L++G C G+V GL + EM + + + + VLI L RL EA +++
Sbjct: 258 AYTYSYLVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVY 317
Query: 420 QLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+ + P YN V+ C+ G EA +V E +++
Sbjct: 318 DMLANSLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKR 357
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 13/275 (4%)
Query: 175 AQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGD 234
AQ + N Y ++ + + + L E++ + +N ++ C
Sbjct: 99 AQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNCIIRFCCGRKF 158
Query: 235 V-DEAFKFLNGM-RSFGCSPDIVTYNTLLH---------GLCRIKEVDRARDLLKEVGLK 283
+ + AF N M RS PD+ TY LL +C + + R L K++
Sbjct: 159 LFNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVY-LHAVRSLTKQMK-S 216
Query: 284 SKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDS 343
+ P+ +I Y K ++ EA +F EM G++PNA+T++ L+ G + G +
Sbjct: 217 NGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYLVKGVCEKGRVGQ 276
Query: 344 ALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLIS 403
LG YK+M G P+ + LI +++ +++ ++M ++S + T++ +++
Sbjct: 277 GLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSLSPDMLTYNTVLT 336
Query: 404 YLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
LC+ R EA +++ + K+ D V Y ++D
Sbjct: 337 ELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 15/229 (6%)
Query: 117 YNMLLRSLC-QKGLHSSAKLLYDCM-RFDGKLPDSRLLGFLVSSFALVDR---------- 164
YN ++R C +K L + A +Y+ M R D PD L + + +L+ R
Sbjct: 146 YNCIIRFCCGRKFLFNRAFDVYNKMLRSDDSKPD--LETYTLLLSSLLKRFNKLNVCYVY 203
Query: 165 LDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNV 224
L + L + + N V + V + ++ K ++D+AI +F+E+ S T++
Sbjct: 204 LHAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSY 263
Query: 225 LMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKS 284
L+ G+C G V + F M+ G P+ Y L+ L + +D A +++ ++ L +
Sbjct: 264 LVKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDM-LAN 322
Query: 285 KFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
SP++ +Y TV++ C+ + EA + +E + + +L+D
Sbjct: 323 SLSPDMLTYNTVLTELCRGGRGSEALEMVEEWKKRDPVMGERNYRTLMD 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 110/269 (40%), Gaps = 19/269 (7%)
Query: 271 DRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNS 330
D A D+ + + + N +Y T+I + +L +E+ + + +N
Sbjct: 89 DLALDIFRWTAQQRGYKHNHEAYHTMIKQAITGKRNNFVETLIEEVIAGACEMSVPLYNC 148
Query: 331 LID-----GFVKVGNMDSALGIYKKMLFHG-CPPDVVTFTSLIEGYC-RVGKVNYGLDLW 383
+I F+ + A +Y KML PD+ T+T L+ R K+N
Sbjct: 149 IIRFCCGRKFL----FNRAFDVYNKMLRSDDSKPDLETYTLLLSSLLKRFNKLNVCYVYL 204
Query: 384 H-------EMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHV 436
H +M + + +++I K + EA + +++ P Y+++
Sbjct: 205 HAVRSLTKQMKSNGVIPDTFVLNMIIKAYAKCLEVDEAIRVFKEMALYGSEPNAYTYSYL 264
Query: 437 IDGYCKSGNVDEANAIVVEMEEK-CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGC 495
+ G C+ G V + EM+ K P+ + +LI M+ R +A+ + Y MLA
Sbjct: 265 VKGVCEKGRVGQGLGFYKEMQVKGMVPNGSCYMVLICSLSMERRLDEAVEVVYDMLANSL 324
Query: 496 SPDEITVRILSSCLLKSGMPGEAARIKES 524
SPD +T + + L + G EA + E
Sbjct: 325 SPDMLTYNTVLTELCRGGRGSEALEMVEE 353
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 146/322 (45%), Gaps = 19/322 (5%)
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
+ ++ G G DEA MR +P T++ LL +K+++ R +
Sbjct: 117 WTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTF 176
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
F V T+I Y K + A +FDEM + + ++ LI + +VGNM
Sbjct: 177 RLRGFC-FVYVGNTMIDMYVKCESIDCARKVFDEM----PERDVISWTELIAAYARVGNM 231
Query: 342 DSALGIYKKMLFHGCP-PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSV 400
+ A LF P D+V +T+++ G+ + K L+ + M I A T +
Sbjct: 232 ECA-----AELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAG 286
Query: 401 LISYLCKSNRLQEARDLLRQLKRTDIVPQPSIY--NHVIDGYCKSGNVDEANAIVVEMEE 458
IS + + A ++ +++ P + + +ID Y K GNV+EA + + M
Sbjct: 287 YISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNN 346
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLA-TGCSPDEIT-VRILSSCLLKSGMPG 516
K + FT++ +I G GRA +A+ +F+ M+ T P+ +T V L +C SG+
Sbjct: 347 K---NVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMAC-SHSGLVD 402
Query: 517 EAARIKESLHENQGDSLKKSYY 538
+ ++ +S+++ G + +Y
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHY 424
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/386 (20%), Positives = 162/386 (41%), Gaps = 63/386 (16%)
Query: 114 FWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
WT ++R +G A +Y CMR + P S L+ + + L++ ++
Sbjct: 116 LWT--AVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQF-- 171
Query: 174 EAQCNKVQVNAVVY--DNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCS 231
AQ +++ VY + ++ + VK +D A +F E+
Sbjct: 172 HAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPER------------------ 213
Query: 232 AGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR 291
D++++ L+ R+ ++ A +L + + K ++
Sbjct: 214 ---------------------DVISWTELIAAYARVGNMECAAELFESLPTK-----DMV 247
Query: 292 SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN---MDSALGIY 348
++T +++G+ + +K +EA FD M++SG + + T I ++G D A+ I
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIA 307
Query: 349 KKMLFHGCPPD-VVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+K + P D VV ++LI+ Y + G V ++++ MN +N+ T+S +I L
Sbjct: 308 QKSGY--SPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNV----FTYSSMILGLAT 361
Query: 408 SNRLQEARDLLRQL-KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK--CKPDK 464
R QEA L + +T+I P + + SG VD+ + M + +P +
Sbjct: 362 HGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTR 421
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKM 490
+T ++ GR +A+ + M
Sbjct: 422 DHYTCMVDLLGRTGRLQEALELIKTM 447
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 8/186 (4%)
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
N F + ++I G+ G D A+ +Y M P TF++L++ + +N G
Sbjct: 113 NPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFH 172
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+ ++ + +I K + AR + ++ D++ + +I Y +
Sbjct: 173 AQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVIS----WTELIAAYARV 228
Query: 444 GNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR 503
GN++ A + + K D +T ++ G + +A+ F +M +G DE+TV
Sbjct: 229 GNMECAAELFESLPTK---DMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVA 285
Query: 504 -ILSSC 508
+S+C
Sbjct: 286 GYISAC 291
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 174/379 (45%), Gaps = 24/379 (6%)
Query: 148 DSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLF 207
D RL+ +++ RLD++ + + Q + N VY+ L V + ++ L+
Sbjct: 804 DCRLMNQFITACTSFKRLDLAVSTMTQMQ----EPNVFVYNALFKGFVTCSHPIRSLELY 859
Query: 208 RELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRI 267
++R + T++ L+ A E+ + FG I T TL+
Sbjct: 860 VRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQT--TLIDFYSAT 917
Query: 268 KEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFT 327
+ AR + E+ + + +TT++S Y ++ M A+SL ++M ++ N T
Sbjct: 918 GRIREARKVFDEMPERDDIA-----WTTMVSAYRRVLDMDSANSLANQM----SEKNEAT 968
Query: 328 FNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMN 387
N LI+G++ +GN++ A ++ +M D++++T++I+GY + + + ++++M
Sbjct: 969 SNCLINGYMGLGNLEQAESLFNQMPV----KDIISWTTMIKGYSQNKRYREAIAVFYKMM 1024
Query: 388 TRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVD 447
I T S +IS L+ +++ + V I + ++D Y K G+++
Sbjct: 1025 EEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLE 1084
Query: 448 EANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILS 506
A + + +K + F + +I G G A +A+ +F KM P+ +T V + +
Sbjct: 1085 RALLVFFNLPKK---NLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFT 1141
Query: 507 SCLLKSGMPGEAARIKESL 525
+C +G+ E RI S+
Sbjct: 1142 AC-THAGLVDEGRRIYRSM 1159
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 113/255 (44%), Gaps = 37/255 (14%)
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+K+ + + R I+ ++ A S +M +PN F +N+L GFV +
Sbjct: 797 IKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQ----EPNVFVYNALFKGFVTCSHP 852
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
+L +Y +ML P T++SL++ + +G L + + + L
Sbjct: 853 IRSLELYVRMLRDSVSPSSYTYSSLVKASSFASR--FGESLQAHIWKFGFGFHVKIQTTL 910
Query: 402 ISYLCKSNRLQEARDLLRQL-KRTDIV--PQPSIYNHVID-------------------- 438
I + + R++EAR + ++ +R DI S Y V+D
Sbjct: 911 IDFYSATGRIREARKVFDEMPERDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSN 970
Query: 439 ----GYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATG 494
GY GN+++A ++ +M K D ++T +I G+ R +AI +FYKM+ G
Sbjct: 971 CLINGYMGLGNLEQAESLFNQMPVK---DIISWTTMIKGYSQNKRYREAIAVFYKMMEEG 1027
Query: 495 CSPDEITVR-ILSSC 508
PDE+T+ ++S+C
Sbjct: 1028 IIPDEVTMSTVISAC 1042
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 94/219 (42%), Gaps = 7/219 (3%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++ +++ Q + A ++ M +G +PD + ++S+ A + L++ KE+
Sbjct: 999 SWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGKEVHMYT 1058
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
N ++ + L+ + K L+ A+ +F L + + +N ++ GL + G
Sbjct: 1059 LQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKN----LFCWNSIIEGLAAHGFA 1114
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EA K M P+ VT+ ++ VD R + + + NV Y
Sbjct: 1115 QEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIYRSMIDDYSIVSNVEHYGG 1174
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDG 334
++ + K + EA L M+ +PNA + +L+DG
Sbjct: 1175 MVHLFSKAGLIYEALELIGNME---FEPNAVIWGALLDG 1210
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 139/295 (47%), Gaps = 20/295 (6%)
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQV----NAVVYDNLLSVLV 195
MR P+ + + S+ A + RL ++L CN + + + V ++++ +
Sbjct: 301 MRNSQVPPNEQTFASMFSACASLSRLVWGEQL----HCNVLSLGLNDSLSVSNSMMKMYS 356
Query: 196 KHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIV 255
L A LF+ MR + ST ++GG C AG +E FK+ + MR G P
Sbjct: 357 TCGNLVSASVLFQG-MRCRDIISWST---IIGGYCQAGFGEEGFKYFSWMRQSGTKPTDF 412
Query: 256 TYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDE 315
+LL + ++ R + + L N +++I+ Y K +KEAS +F E
Sbjct: 413 ALASLLSVSGNMAVIEGGRQ-VHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGE 471
Query: 316 MDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGK 375
DR + + ++I+G+ + G A+ +++K L G PD VTF S++ G+
Sbjct: 472 TDRD----DIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Query: 376 VNYGLDLWHEMN-TRNISASLHTFSVLISYLCKSNRLQEARDLLRQL--KRTDIV 427
++ G ++ M T N+ + + ++ LC++ RL +A ++ ++ K+ D+V
Sbjct: 528 LDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVV 582
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 58/271 (21%)
Query: 245 MRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLS 304
M+ + ++V+ + L G+ R RD++ S++T+I GYC+
Sbjct: 352 MKMYSTCGNLVSASVLFQGM-------RCRDII--------------SWSTIIGGYCQAG 390
Query: 305 KMKEASSLFDEMDRSGTKPNAFTFNSL---------IDGFVKVG---------------- 339
+E F M +SGTKP F SL I+G +V
Sbjct: 391 FGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRS 450
Query: 340 ---NMDSALGIYKK--MLFHGCP-PDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
NM S G K+ M+F D+V+ T++I GY GK +DL+ +
Sbjct: 451 SLINMYSKCGSIKEASMIFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRP 510
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRT-DIVPQPSIYNHVIDGYCKSGNVDEANAI 452
TF +++ S +L ++ T ++ P Y ++D C++G + +A +
Sbjct: 511 DSVTFISVLTACTHSGQLDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKM 570
Query: 453 VVEMEEKCKPDKFTFTILIA----GHCMKGR 479
+ EM K K D T+LIA G +GR
Sbjct: 571 INEMSWK-KDDVVWTTLLIACKAKGDIERGR 600
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/365 (18%), Positives = 149/365 (40%), Gaps = 16/365 (4%)
Query: 111 HHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRF--DGKLPDSRLLGFLVSSFALVDRLDVS 168
H ++ +++ A +L+ MR PD+ +L ++ + +
Sbjct: 68 HGDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYG 127
Query: 169 KELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGG 228
+ L A A + + V +LL + + K+D + +F E+ T+ ++ G
Sbjct: 128 ESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEM----PFRNAVTWTAIITG 183
Query: 229 LCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSP 288
L AG E + + M D T+ L +++V + + V ++ F
Sbjct: 184 LVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRG-FVT 242
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
+ ++ + Y + +M++ LF+ M ++ + ++ SLI + ++G A+ +
Sbjct: 243 TLCVANSLATMYTECGEMQDGLCLFENM----SERDVVSWTSLIVAYKRIGQEVKAVETF 298
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
KM PP+ TF S+ + ++ +G L + + ++ SL + ++
Sbjct: 299 IKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTC 358
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF 467
L A L + ++ DI+ ++ +I GYC++G +E M + KP F
Sbjct: 359 GNLVSASVLFQGMRCRDIIS----WSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFAL 414
Query: 468 TILIA 472
L++
Sbjct: 415 ASLLS 419
>AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22704630-22706126 REVERSE
LENGTH=498
Length = 498
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 120/246 (48%), Gaps = 14/246 (5%)
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLL-------KEVGLKSKFSP 288
D+A+ + +R P+++++ ++ LC+I + + L KE+ + KF
Sbjct: 120 DQAWALMAEVRK--DYPNLLSFKSMSILLCKIAKFGSYEETLEAFVKMEKEI-FRKKFG- 175
Query: 289 NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIY 348
V + ++ +C +MKEA S+F+++ S P+ T N L+ GF + G++ + Y
Sbjct: 176 -VDEFNILLRAFCTEREMKEARSIFEKL-HSRFNPDVKTMNILLLGFKEAGDVTATELFY 233
Query: 349 KKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKS 408
+M+ G P+ VT+ I+G+C+ L L+ +M+ + ++ + LI +
Sbjct: 234 HEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVA 293
Query: 409 NRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF 467
+AR L ++ + + P YN ++ K G+V A ++ EMEEK +PD TF
Sbjct: 294 RNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTF 353
Query: 468 TILIAG 473
+ G
Sbjct: 354 HSMFIG 359
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 122/292 (41%), Gaps = 7/292 (2%)
Query: 222 FNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG 281
FN+L+ C+ ++ EA + S +PD+ T N LL G +V A +L
Sbjct: 179 FNILLRAFCTEREMKEARSIFEKLHS-RFNPDVKTMNILLLGFKEAGDVT-ATELFYHEM 236
Query: 282 LKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNM 341
+K F PN +Y I G+CK EA LF++MDR +LI G N
Sbjct: 237 VKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDITVQILTTLIHGSGVARNK 296
Query: 342 DSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVL 401
A ++ ++ G PD + +L+ + G V+ + + EM + I TF +
Sbjct: 297 IKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKEMEEKGIEPDSVTFHSM 356
Query: 402 ISYLCKSNR--LQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+ KS + +++K +VP+ ++ +C +G V+ + M EK
Sbjct: 357 FIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEK 416
Query: 460 --CKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCL 509
C P +L C + RA DA ++ + G E R+L + L
Sbjct: 417 GYC-PHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSL 467
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 99/467 (21%), Positives = 202/467 (43%), Gaps = 81/467 (17%)
Query: 113 SFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGK--LPDSRLLGFLVSSFALVDRLDVSKE 170
S +YN+++R ++GL+ A ++ M +G +PD F+ + + + +
Sbjct: 79 SLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLV 138
Query: 171 LLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLC 230
+ + + V + LL++ + K++ A +F ++M++ + ++N ++ G
Sbjct: 139 VHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVF-DVMKNR---DVISWNTMISGYY 194
Query: 231 SAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV 290
G +++A + M + D T ++L +K+++ R++ K V K + +
Sbjct: 195 RNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEK-RLGDKI 253
Query: 291 RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKK 350
+++ Y K +M EA +FD M+R + T+ +I+G+ + G++++AL + +
Sbjct: 254 EVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDVENALELCRL 309
Query: 351 MLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN-------ISASL-------- 395
M F G P+ VT SL+ KVN G L H R I SL
Sbjct: 310 MQFEGVRPNAVTIASLVSVCGDALKVNDGKCL-HGWAVRQQVYSDIIIETSLISMYAKCK 368
Query: 396 ---------------HT--FSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
HT +S +I+ ++ + +A L ++++R D+ P + N ++
Sbjct: 369 RVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLP 428
Query: 439 GYC-----------------------------------KSGNVDEANAIVVEMEEKCKP- 462
Y K G ++ A+ I ++EK K
Sbjct: 429 AYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSK 488
Query: 463 DKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
D + LI+G+ M G +A+ +F +M+ +G +P+EIT L++C
Sbjct: 489 DVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNAC 535
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/366 (18%), Positives = 149/366 (40%), Gaps = 38/366 (10%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++N ++ + G + A +++D M + D + ++ + L++ + +
Sbjct: 185 SWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLV 244
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ ++ V + L+++ +K ++D+A +F + R + T+ ++ G GDV
Sbjct: 245 EEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERR----DVITWTCMINGYTEDGDV 300
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTL---------------LHGLCRIKEVDRARDLLKEV 280
+ A + M+ G P+ VT +L LHG ++V D++ E
Sbjct: 301 ENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQV--YSDIIIET 358
Query: 281 GLKSKFSPNVR-----------------SYTTVISGYCKLSKMKEASSLFDEMDRSGTKP 323
L S ++ R ++ +I+G + + +A LF M R +P
Sbjct: 359 SLISMYAKCKRVDLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRREDVEP 418
Query: 324 NAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLW 383
N T NSL+ + + ++ A+ I+ + G + T L+ Y + G + ++
Sbjct: 419 NIATLNSLLPAYAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIF 478
Query: 384 HEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKS 443
+ + ++ S + + LIS A + ++ R+ + P + ++ S
Sbjct: 479 NGIQEKHKSKDVVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHS 538
Query: 444 GNVDEA 449
G V+E
Sbjct: 539 GLVEEG 544
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 146/353 (41%), Gaps = 27/353 (7%)
Query: 141 RFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKL 200
R + L + L++ FA + +K L C+ V V ++LS L L
Sbjct: 7 RANNALSSVKQYQSLLNHFAATQSISKTKAL----HCH-VITGGRVSGHILSTLSVTYAL 61
Query: 201 DDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG--CSPDIVTYN 258
I R+L ++N+++ G +A M S G C PD TY
Sbjct: 62 CGHITYARKLFEEMPQSSLLSYNIVIRMYVREGLYHDAISVFIRMVSEGVKCVPDGYTYP 121
Query: 259 TLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDR 318
+ +K + + + L+S F + +++ Y K++ A +FD M
Sbjct: 122 FVAKAAGELKSMKLGLVVHGRI-LRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKN 180
Query: 319 SGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNY 378
+ ++N++I G+ + G M+ AL ++ M+ D T S++ + +
Sbjct: 181 R----DVISWNTMISGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEM 236
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVID 438
G ++ + + + + + L++ K R+ EAR + +++R D++ + +I+
Sbjct: 237 GRNVHKLVEEKRLGDKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVIT----WTCMIN 292
Query: 439 GYCKSGNVDEANAIVVEME-EKCKPDKFTFTILIA----------GHCMKGRA 480
GY + G+V+ A + M+ E +P+ T L++ G C+ G A
Sbjct: 293 GYTEDGDVENALELCRLMQFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWA 345
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 128/285 (44%), Gaps = 12/285 (4%)
Query: 189 NLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSF 248
+LL + + + +A LF EL S + + +M G G +EA KF MR
Sbjct: 670 SLLGMYMNSRGMTEACALFSELSSPKSIV---LWTGMMSGHSQNGFYEEALKFYKEMRHD 726
Query: 249 GCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKE 308
G PD T+ T+L +C + R + + + + T+I Y K MK
Sbjct: 727 GVLPDQATFVTVLR-VCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKG 785
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIE 368
+S +FDEM R + N ++NSLI+G+ K G + AL I+ M PD +TF ++
Sbjct: 786 SSQVFDEMRR---RSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLT 842
Query: 369 GYCRVGKVNYGLDLWHEM-NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
GKV+ G ++ M I A + + ++ L + LQEA D ++ ++
Sbjct: 843 ACSHAGKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDF---IEAQNLK 899
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIA 472
P +++ ++ G C+ D I E + +P + +L++
Sbjct: 900 PDARLWSSLL-GACRIHGDDIRGEISAEKLIELEPQNSSAYVLLS 943
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/474 (22%), Positives = 187/474 (39%), Gaps = 76/474 (16%)
Query: 99 KFFQFTREKLNVHHSFWTYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSS 158
K F+ EK +V FW N ++R G L+ M+ G D L+S+
Sbjct: 383 KVFEALEEKNDV---FW--NAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLST 437
Query: 159 FALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLE 218
A L++ + + K+ N V + L+ + K L+DA R++ +
Sbjct: 438 CAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA----RQIFERMCDRD 493
Query: 219 TSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG------CSPDIVTYNTLLHGLCRIKEV-- 270
T+N ++G + EAF M G C + T +HGL + K+V
Sbjct: 494 NVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHC 553
Query: 271 -------DRAR-------DLLKEVGL----KSKFSP----NVRSYTTVISGYCKLSKMKE 308
DR D+ + G+ + FS +V S +I+GY + + ++E
Sbjct: 554 LSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQ-NNLEE 612
Query: 309 ASSLFDEMDRSGTKPNAFTFNSLID---------------------GFVKVGNM--DSAL 345
A LF EM G P+ TF ++++ GF G S L
Sbjct: 613 AVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLL 672
Query: 346 GIY--KKMLFHGC--------PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASL 395
G+Y + + C P +V +T ++ G+ + G L + EM +
Sbjct: 673 GMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQ 732
Query: 396 HTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVE 455
TF ++ + L+E R + + N +ID Y K G++ ++ + E
Sbjct: 733 ATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDE 792
Query: 456 MEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
M + + ++ LI G+ G A DA+ IF M + PDEIT + +L++C
Sbjct: 793 MRRR--SNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTAC 844
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 161/363 (44%), Gaps = 20/363 (5%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
+N+++ ++G + A + MR LG ++S+ +V LD+ + AEA
Sbjct: 294 AWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEA 353
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
+ N V +L+S+ K K++ A +F L + +N ++ G G+
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF----WNAMIRGYAHNGES 409
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
+ + M+S G + D T+ +LL +++ + +K K + N+
Sbjct: 410 HKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQ-FHSIIIKKKLAKNLFVGNA 468
Query: 296 VISGYCKLSKMKEASSLFDEM-DRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFH 354
++ Y K +++A +F+ M DR + T+N++I +V+ N A ++K+M
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDR-----DNVTWNTIIGSYVQDENESEAFDLFKRMNLC 523
Query: 355 GCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLISYLCKSNRLQE 413
G D S ++ V + G + H ++ + + LHT S LI K +++
Sbjct: 524 GIVSDGACLASTLKACTHVHGLYQGKQV-HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKD 582
Query: 414 ARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK-CKPDKFTF-TILI 471
AR + L +V N +I GY ++ N++EA + EM + P + TF TI+
Sbjct: 583 ARKVFSSLPEWSVVSM----NALIAGYSQN-NLEEAVVLFQEMLTRGVNPSEITFATIVE 637
Query: 472 AGH 474
A H
Sbjct: 638 ACH 640
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/340 (21%), Positives = 137/340 (40%), Gaps = 43/340 (12%)
Query: 190 LLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFG 249
L+ + K +++ DA +F ++ + T + L G AG +EA MR G
Sbjct: 201 LVDMYAKCDRISDARRVFEWIVDPN----TVCWTCLFSGYVKAGLPEEAVLVFERMRDEG 256
Query: 250 CSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEA 309
PD + + T+++ R+ ++ AR L E+ SP+V ++ +ISG+ K A
Sbjct: 257 HRPDHLAFVTVINTYIRLGKLKDARLLFGEMS-----SPDVVAWNVMISGHGKRGCETVA 311
Query: 310 SSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV--------- 360
F M +S K T S++ V N+D L ++ + + G ++
Sbjct: 312 IEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSM 371
Query: 361 ----------------------VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTF 398
V + ++I GY G+ + ++L+ +M + + TF
Sbjct: 372 YSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTF 431
Query: 399 SVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEE 458
+ L+S S+ L+ + + + + N ++D Y K G +++A I E
Sbjct: 432 TSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQI---FER 488
Query: 459 KCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPD 498
C D T+ +I + +A +F +M G D
Sbjct: 489 MCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 252 PDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
P+ T++ +L R V+ R + + +K N ++ Y K ++ +A
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSM-IKMGLERNSYCGGALVDMYAKCDRISDARR 216
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+F+ + PN + L G+VK G + A+ ++++M G PD + F ++I Y
Sbjct: 217 VFEWI----VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVINTYI 272
Query: 372 RVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPS 431
R+GK+ L+ EM++ ++ A ++V+IS K A + ++++ + S
Sbjct: 273 RLGKLKDARLLFGEMSSPDVVA----WNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRS 328
Query: 432 IYNHVIDGYCKSGNVD-----EANAI-------------VVEMEEKC------------- 460
V+ N+D A AI +V M KC
Sbjct: 329 TLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEAL 388
Query: 461 --KPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSCL----LKSG 513
K D F + +I G+ G + + +F M ++G + D+ T +LS+C L+ G
Sbjct: 389 EEKNDVF-WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG 447
Query: 514 MPGEAARIKESLHEN 528
+ IK+ L +N
Sbjct: 448 SQFHSIIIKKKLAKN 462
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 196/484 (40%), Gaps = 62/484 (12%)
Query: 87 VVKRLNN--PILGFKFFQFTRE--------------KLNVHHSFWTYNMLLRSLCQKGLH 130
VV R N+ PIL + FT+E N H SF ++ L+R L Q
Sbjct: 27 VVNRYNHLEPILVHQTLHFTKEFSRNIVTYVKRILKGFNGHDSF-SWGCLVRFLSQHRKF 85
Query: 131 SSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNL 190
+Y M G P S + ++ + ++ + K + A+A N + V L
Sbjct: 86 KETVDVYIDMHNSGIPPSSHAVTSVLRACGKMENMVDGKPIHAQALKNGLCGCVYVQTGL 145
Query: 191 LSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGC 250
+ + + ++ A F ++ + T ++N L+ G +G++DEA + + +
Sbjct: 146 VGLYSRLGYIELAKKAFDDIAEKN----TVSWNSLLHGYLESGELDEARRVFDKIPE--- 198
Query: 251 SPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVR------------------- 291
D V++N ++ + ++ A L + LKS S N+
Sbjct: 199 -KDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPASWNILIGGYVNCREMKLARTYFDA 257
Query: 292 -------SYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSA 344
S+ T+ISGY KL ++ A LF M +K + ++++I + + G A
Sbjct: 258 MPQKNGVSWITMISGYTKLGDVQSAEELFRLM----SKKDKLVYDAMIACYTQNGKPKDA 313
Query: 345 LGIYKKMLFHGC--PPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI 402
L ++ +ML PD +T +S++ ++G ++G + + I + LI
Sbjct: 314 LKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWVESYITEHGIKIDDLLSTSLI 373
Query: 403 SYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM-EEKCK 461
K +A + L + D V Y+ +I G +G EAN++ M E+K
Sbjct: 374 DLYMKGGDFAKAFKMFSNLNKKDTVS----YSAMIMGCGINGMATEANSLFTAMIEKKIP 429
Query: 462 PDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARI 521
P+ TFT L++ + G + F M P I+ L ++G EA +
Sbjct: 430 PNVVTFTGLLSAYSHSGLVQEGYKCFNSMKDHNLEPSADHYGIMVDMLGRAGRLEEAYEL 489
Query: 522 KESL 525
+S+
Sbjct: 490 IKSM 493
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 128/304 (42%), Gaps = 39/304 (12%)
Query: 253 DIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNV---------------------- 290
+ V++N+LLHG E+D AR + ++ K S N+
Sbjct: 169 NTVSWNSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMP 228
Query: 291 ----RSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALG 346
S+ +I GY +MK A + FD M + N ++ ++I G+ K+G++ SA
Sbjct: 229 LKSPASWNILIGGYVNCREMKLARTYFDAM----PQKNGVSWITMISGYTKLGDVQSAEE 284
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRN--ISASLHTFSVLISY 404
+++ M D + + ++I Y + GK L L+ +M RN I T S ++S
Sbjct: 285 LFRLM----SKKDKLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSA 340
Query: 405 LCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDK 464
+ + + I + +ID Y K G+ +A + + +K D
Sbjct: 341 NSQLGNTSFGTWVESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKK---DT 397
Query: 465 FTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVRILSSCLLKSGMPGEAARIKES 524
+++ +I G + G A +A +F M+ P+ +T L S SG+ E + S
Sbjct: 398 VSYSAMIMGCGINGMATEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNS 457
Query: 525 LHEN 528
+ ++
Sbjct: 458 MKDH 461
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 159/334 (47%), Gaps = 31/334 (9%)
Query: 140 MRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQCNKVQV--NAVVYDNLLSVLVKH 197
MRFDG P+ L+++ ++ + + L C K V ++ +++ K
Sbjct: 363 MRFDGVYPNEVTFVGLINAVKCNEQ--IKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKF 420
Query: 198 NKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK-FLNGMRSFGCSPDIVT 256
L+DA F ++ + E ++N ++ G G EA K FL+ P+ T
Sbjct: 421 EALEDAKKAFEDI----TFREIISWNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYT 474
Query: 257 YNTLLHGLC-----RIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASS 311
+ ++L+ + +K+ R L ++GL S P V S ++ Y K + E+
Sbjct: 475 FGSVLNAIAFAEDISVKQGQRCHAHLLKLGLNS--CPVVSS--ALLDMYAKRGNIDESEK 530
Query: 312 LFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYC 371
+F+EM ++ N F + S+I + G+ ++ + ++ KM+ PD+VTF S++
Sbjct: 531 VFNEM----SQKNQFVWTSIISAYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACN 586
Query: 372 RVGKVNYGLDLWHEM-NTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQP 430
R G V+ G ++++ M N+ S +S ++ L ++ RL+EA +L+ ++ P
Sbjct: 587 RKGMVDKGYEIFNMMIEVYNLEPSHEHYSCMVDMLGRAGRLKEAEELMSEVPGG---PGE 643
Query: 431 SIYNHVIDGYCK-SGNVDEANAIVVEMEEKCKPD 463
S+ ++ G C+ GNV + A V E+ + KP+
Sbjct: 644 SMLQSML-GSCRLHGNV-KMGAKVAELAMEMKPE 675
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 164/390 (42%), Gaps = 107/390 (27%)
Query: 183 NAVVYDNLLSVLVKHNKLD-DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKF 241
+ + +++LLS L + +A+ +FR++MR L+ +F ++ C D+ A +
Sbjct: 239 DMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQ- 297
Query: 242 LNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVG--LKSKFSP----------- 288
+HGLC + R + L EVG L S++S
Sbjct: 298 -------------------IHGLC----IKRGYESLLEVGNILMSRYSKCGVLEAVKSVF 334
Query: 289 ------NVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID--------- 333
NV S+TT+IS S +A S+F M G PN TF LI+
Sbjct: 335 HQMSERNVVSWTTMIS-----SNKDDAVSIFLNMRFDGVYPNEVTFVGLINAVKCNEQIK 389
Query: 334 ------------GFVK---VGN-----------MDSALGIYKKMLFHGCPPDVVTFTSLI 367
GFV VGN ++ A ++ + F +++++ ++I
Sbjct: 390 EGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAFEDITFR----EIISWNAMI 445
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDL-LRQLKRT-- 424
G+ + G HE +SA+ T ++ N + A D+ ++Q +R
Sbjct: 446 SGFAQNG-------FSHEALKMFLSAAAETMPNEYTFGSVLNAIAFAEDISVKQGQRCHA 498
Query: 425 -----DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGR 479
+ P + + ++D Y K GN+DE+ + EM +K ++F +T +I+ + G
Sbjct: 499 HLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQK---NQFVWTSIISAYSSHGD 555
Query: 480 APDAIVIFYKMLATGCSPDEIT-VRILSSC 508
+ +F+KM+ +PD +T + +L++C
Sbjct: 556 FETVMNLFHKMIKENVAPDLVTFLSVLTAC 585
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 125/288 (43%), Gaps = 23/288 (7%)
Query: 186 VYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGM 245
V + ++ + K + D+A+C+F L+ + ++N ++ G D A F+ M
Sbjct: 113 VSNAVMGMYRKAGRFDNALCIFENLVDP----DVVSWNTILSGF---DDNQIALNFVVRM 165
Query: 246 RSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSK 305
+S G D TY+T L C E L+ +K+ ++ + I+ Y +
Sbjct: 166 KSAGVVFDAFTYSTAL-SFCVGSEGFLLGLQLQSTVVKTGLESDLVVGNSFITMYSRSGS 224
Query: 306 MKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMD-SALGIYKKMLFHGCPPDVVTFT 364
+ A +FDEM + + ++NSL+ G + G A+ I++ M+ G D V+FT
Sbjct: 225 FRGARRVFDEM----SFKDMISWNSLLSGLSQEGTFGFEAVVIFRDMMREGVELDHVSFT 280
Query: 365 SLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRT 424
S+I C + + R + L ++L+S K L+ + + Q+
Sbjct: 281 SVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRYSKCGVLEAVKSVFHQMSER 340
Query: 425 DIVPQPSIYNHVIDGYCKSGNVDEANAIVVEME-EKCKPDKFTFTILI 471
++V ++ S N D+A +I + M + P++ TF LI
Sbjct: 341 NVVSWTTMI---------SSNKDDAVSIFLNMRFDGVYPNEVTFVGLI 379
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 152/342 (44%), Gaps = 21/342 (6%)
Query: 173 AEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSH-----SHLETSTFNVLMG 227
AE +++ V N + ++ K N L RELM+ SH+E +F +
Sbjct: 15 AETFTKHSKIDTVNTQNPILLISKCNSL-------RELMQIQAYAIKSHIEDVSFVAKLI 67
Query: 228 GLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFS 287
C+ + + + + PDIV +N++ G R L E+ L+
Sbjct: 68 NFCTESPTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEI-LEDGIL 126
Query: 288 PNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGI 347
P+ ++ +++ ++E L + G N + +LI+ + + ++DSA +
Sbjct: 127 PDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCV 186
Query: 348 YKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCK 407
+ +++ P VV + ++I GY R + N L L+ EM + + + T ++S
Sbjct: 187 FDRIV----EPCVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCAL 242
Query: 408 SNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTF 467
L + + + K+ + +ID + K G++D+A +I +M K D +
Sbjct: 243 LGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYK---DTQAW 299
Query: 468 TILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT-VRILSSC 508
+ +I + G+A ++++F +M + PDEIT + +L++C
Sbjct: 300 SAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNAC 341
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 125/308 (40%), Gaps = 47/308 (15%)
Query: 202 DAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLL 261
+ LF E++ + TF L+ A ++E + G ++ TL+
Sbjct: 112 EVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLI 171
Query: 262 HGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGT 321
+ ++VD AR + + P V Y +I+GY + ++ EA SLF EM
Sbjct: 172 NMYTECEDVDSARCVFDRI-----VEPCVVCYNAMITGYARRNRPNEALSLFREMQGKYL 226
Query: 322 KPNAFTF-----------------------------------NSLIDGFVKVGNMDSALG 346
KPN T +LID F K G++D A+
Sbjct: 227 KPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVS 286
Query: 347 IYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLC 406
I++KM + D ++++I Y GK + ++ M + N+ TF L++
Sbjct: 287 IFEKMRYK----DTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDEITFLGLLNACS 342
Query: 407 KSNRLQEARDLLRQL-KRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF 465
+ R++E R Q+ + IVP Y ++D ++GN+++A + ++ P
Sbjct: 343 HTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFIDKL--PISPTPM 400
Query: 466 TFTILIAG 473
+ IL+A
Sbjct: 401 LWRILLAA 408
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 142/340 (41%), Gaps = 36/340 (10%)
Query: 117 YNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEAQ 176
YN ++ ++ + A L+ M+ P+ L ++SS AL+ LD+ K + A+
Sbjct: 198 YNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAK 257
Query: 177 ----CNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSA 232
C V+VN + D + K LDDA+ +F E MR + +T ++ ++ +
Sbjct: 258 KHSFCKYVKVNTALID----MFAKCGSLDDAVSIF-EKMR---YKDTQAWSAMIVAYANH 309
Query: 233 GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRS 292
G +++ MRS PD +T+ LL+ V+ R ++ K P+++
Sbjct: 310 GKAEKSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKH 369
Query: 293 YTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKML 352
Y +++ + +++A D++ S P + L+ N+D A + +++
Sbjct: 370 YGSMVDLLSRAGNLEDAYEFIDKLPIS---PTPMLWRILLAACSSHNNLDLAEKVSERIF 426
Query: 353 ----FHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR-----------NISASLHT 397
HG D V ++L Y R K Y L M R ++ +H
Sbjct: 427 ELDDSHG--GDYVILSNL---YARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHE 481
Query: 398 FSVLISYLCKSNRLQEARD-LLRQLKRTDIVPQPSIYNHV 436
F + +L A D ++++LK + VP S+ H
Sbjct: 482 FFSGDGVKSATTKLHRALDEMVKELKLSGYVPDTSMVVHA 521
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 127/293 (43%), Gaps = 51/293 (17%)
Query: 221 TFNVLMGGLCSA-GDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL--- 276
+FN ++ GL + D + A M+ G PD TYN + +++E+ R +
Sbjct: 98 SFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHSS 157
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
L +VGL+ N ++I Y K ++ A LFDE+ T+ + ++NS+I G+
Sbjct: 158 LFKVGLERDVHIN----HSLIMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISGYS 209
Query: 337 KVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLH 396
+ G A+ +++KM G PD T S++ +G + G L T+ I S
Sbjct: 210 EAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAITKKIGLSTF 269
Query: 397 TFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEM 456
S LIS Y K G++D A + +M
Sbjct: 270 LGSKLISM-----------------------------------YGKCGDLDSARRVFNQM 294
Query: 457 EEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITVR-ILSSC 508
K D+ +T +I + G++ +A +F++M TG SPD T+ +LS+C
Sbjct: 295 ---IKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVSPDAGTLSTVLSAC 344
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/307 (22%), Positives = 133/307 (43%), Gaps = 13/307 (4%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA 175
++N ++ + G A L+ M +G PD R L ++ + + + L + L A
Sbjct: 200 SWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMA 259
Query: 176 QCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDV 235
K+ ++ + L+S+ K LD A +F ++++ T+ V G
Sbjct: 260 ITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVY----SQNGKS 315
Query: 236 DEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTT 295
EAFK M G SPD T +T+L + ++ + + S N+ T
Sbjct: 316 SEAFKLFFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELS-LQHNIYVATG 374
Query: 296 VISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHG 355
++ Y K +++EA +F+ M N T+N++I + G+ AL ++ +M
Sbjct: 375 LVDMYGKCGRVEEALRVFEAM----PVKNEATWNAMITAYAHQGHAKEALLLFDRM---S 427
Query: 356 CPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTR-NISASLHTFSVLISYLCKSNRLQEA 414
PP +TF ++ G V+ G +HEM++ + + ++ +I L ++ L EA
Sbjct: 428 VPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEA 487
Query: 415 RDLLRQL 421
+ + +
Sbjct: 488 WEFMERF 494
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 176/432 (40%), Gaps = 85/432 (19%)
Query: 115 WTYNMLLRSLCQK-GLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLA 173
+++N ++R L H +A LY M+F G PD F+ + A ++ + V + + +
Sbjct: 97 YSFNYMIRGLTNTWNDHEAALSLYRRMKFSGLKPDKFTYNFVFIACAKLEEIGVGRSVHS 156
Query: 174 EAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAG 233
++ + + +L+ + K ++ A LF E+ + +T ++N ++ G AG
Sbjct: 157 SLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEI----TERDTVSWNSMISGYSEAG 212
Query: 234 DVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSK-------- 285
+A M G PD T ++L + ++ R LL+E+ + K
Sbjct: 213 YAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGR-LLEEMAITKKIGLSTFLG 271
Query: 286 -------------------FSPNVR----SYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
F+ ++ ++T +I+ Y + K EA LF EM+++G
Sbjct: 272 SKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKLFFEMEKTGVS 331
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCP----PDVVTFTSLIEGYCRVGKVNY 378
P+A T ++++ VG AL + K++ H ++ T L++ Y + G+V
Sbjct: 332 PDAGTLSTVLSACGSVG----ALELGKQIETHASELSLQHNIYVATGLVDMYGKCGRVEE 387
Query: 379 GLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLK--RTDI---------- 426
L ++ M +N + T++ +I+ +EA L ++ +DI
Sbjct: 388 ALRVFEAMPVKNEA----TWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACV 443
Query: 427 ---------------------VPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKF 465
VP+ Y ++ID ++G +DEA + KPD+
Sbjct: 444 HAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGMLDEAWEFMERF--PGKPDEI 501
Query: 466 TFTILIAGHCMK 477
++ G C K
Sbjct: 502 MLAAIL-GACHK 512
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 99/445 (22%), Positives = 188/445 (42%), Gaps = 52/445 (11%)
Query: 116 TYNMLLRSLCQKGLHSSAKLLYDCMRFDGKLPDSRLLGFLVSSFA-------------LV 162
+N +L S + GLH A L+ +RF PD ++S+ A LV
Sbjct: 37 AWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRKIQSLV 96
Query: 163 DR------LDVSKELL-AEAQC------NKV-------QVNAVVYDNLLSVLVKHNKLDD 202
R L V+ L+ +C NKV N V + +LL + + +
Sbjct: 97 IRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSRNEVTWCSLLFAYMNAEQFEA 156
Query: 203 AICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLH 262
A+ +F E+ + + +N+++ G G ++ M PD T+++L++
Sbjct: 157 ALDVFVEMPKRVAF----AWNIMISGHAHCGKLESCLSLFKEMLESEFKPDCYTFSSLMN 212
Query: 263 GLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTK 322
++ V LK+ +S V + +V+S Y KL +A + ++
Sbjct: 213 ACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGSRDDAMRELESIE----V 268
Query: 323 PNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPP-DVVTFTSLIEGYCRVGKVNYGLD 381
++NS+ID +K+G + AL + FH P ++VT+T++I GY R G L
Sbjct: 269 LTQVSWNSIIDACMKIGETEKALEV-----FHLAPEKNIVTWTTMITGYGRNGDGEQALR 323
Query: 382 LWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYC 441
+ EM + + + ++ L + + L + N +++ Y
Sbjct: 324 FFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYA 383
Query: 442 KSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEIT 501
K G++ EA+ ++ K D ++ ++ + G A A+ ++ M+A+G PD +T
Sbjct: 384 KCGDIKEADRAFGDIANK---DLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVT 440
Query: 502 -VRILSSCLLKSGMPGEAARIKESL 525
+ +L++C SG+ E I ES+
Sbjct: 441 FIGLLTTC-SHSGLVEEGCMIFESM 464
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 155/356 (43%), Gaps = 33/356 (9%)
Query: 181 QVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSHLETSTFNVLMGGLCSAGDVDEAFK 240
+++ V ++ +L+ + +AI LF +L S + + +F ++ S G+V K
Sbjct: 32 ELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTAILSTCASLGNVKFGRK 91
Query: 241 FLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGY 300
+ + G + N+L+ + + A + +++ S+ N ++ +++ Y
Sbjct: 92 IQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDSR---NEVTWCSLLFAY 148
Query: 301 CKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDV 360
+ + A +F EM K AF +N +I G G ++S L ++K+ML PD
Sbjct: 149 MNAEQFEAALDVFVEM----PKRVAFAWNIMISGHAHCGKLESCLSLFKEMLESEFKPDC 204
Query: 361 VTFTSLIEGYCRVGKVN--YGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLL 418
TF+SL+ C N YG + M S+++ + ++S+ K L D +
Sbjct: 205 YTFSSLMNA-CSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTK---LGSRDDAM 260
Query: 419 RQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKG 478
R+L+ +++ Q S +N +ID K G ++A + EK + T+T +I G+ G
Sbjct: 261 RELESIEVLTQVS-WNSIIDACMKIGETEKALEVFHLAPEK---NIVTWTTMITGYGRNG 316
Query: 479 RAPDAIVIFYKMLATGCSPDEITV----------------RILSSCLLKSGMPGEA 518
A+ F +M+ +G D +++ CL+ G G A
Sbjct: 317 DGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYA 372
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/303 (20%), Positives = 118/303 (38%), Gaps = 13/303 (4%)
Query: 221 TFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEV 280
T+ ++ G GD ++A +F M G D Y +LH + + + ++
Sbjct: 304 TWTTMITGYGRNGDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGK-MIHGC 362
Query: 281 GLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGN 340
+ F +++ Y K +KEA F ++ + ++N+++ F G
Sbjct: 363 LIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDI----ANKDLVSWNTMLFAFGVHGL 418
Query: 341 MDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEM-NTRNISASLHTFS 399
D AL +Y M+ G PD VTF L+ G V G ++ M I + +
Sbjct: 419 ADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVT 478
Query: 400 VLISYLCKSNRLQEARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDEANAIVVEMEEK 459
+I + L EA+DL + + G C + E V ++ +
Sbjct: 479 CMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKI 538
Query: 460 CKP-DKFTFTILIAGHCMKGRAPDAIVIFYKML------ATGCSPDEITVRILSSCLLKS 512
+P ++ +F +L +C GR + + +M+ GCS E+ ++ + + S
Sbjct: 539 AEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTPGCSWIEVGNQVSTFVVGDS 598
Query: 513 GMP 515
P
Sbjct: 599 SHP 601
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 170/414 (41%), Gaps = 95/414 (22%)
Query: 157 SSFALVDRLDVSKELLAEAQCNKVQVNAVVYDNLLSVLVKHNKLDDAICLFRELMRSHSH 216
+ L DR V+K QVN L ++DA+ LF E+ ++ +
Sbjct: 48 ARLVLRDRYKVTK-----------QVNDPALTRALRGFADSRLMEDALQLFDEMNKADAF 96
Query: 217 LETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRARDL 276
L +NV++ G S G EA +F + M G D TY ++ + I ++ + +
Sbjct: 97 L----WNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKI 152
Query: 277 LKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLIDGFV 336
V +K F +V ++IS Y KL +A +F+EM + + ++NS+I G++
Sbjct: 153 HAMV-IKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEM----PERDIVSWNSMISGYL 207
Query: 337 KVGNMDSALGIYKKMLFHGCPP------------------------------------DV 360
+G+ S+L ++K+ML G P DV
Sbjct: 208 ALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDV 267
Query: 361 VTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLI-----------SYLC--- 406
+ TS+++ Y + G+V+Y +++ M RNI A ++V+I ++LC
Sbjct: 268 MVMTSILDMYSKYGEVSYAERIFNGMIQRNIVA----WNVMIGCYARNGRVTDAFLCFQK 323
Query: 407 --KSNRLQ----------------EARDLLRQLKRTDIVPQPSIYNHVIDGYCKSGNVDE 448
+ N LQ E R + R +P + +ID Y + G +
Sbjct: 324 MSEQNGLQPDVITSINLLPASAILEGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKS 383
Query: 449 ANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIFYKMLATGCSPDEITV 502
A I M EK + ++ +IA + G+ A+ +F ++ + PD T+
Sbjct: 384 AEVIFDRMAEK---NVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTI 434
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 102/524 (19%), Positives = 213/524 (40%), Gaps = 96/524 (18%)
Query: 86 EVVKRLNNPIL--GFKFFQFTR---------EKLNVHHSFWTYNMLLRSLCQKGLHSSAK 134
+V K++N+P L + F +R +++N +F +N++++ GL+ A
Sbjct: 57 KVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAF-LWNVMIKGFTSCGLYIEAV 115
Query: 135 LLYDCMRFDGKLPDSRLLGFLVSSFALVDRLDVSKELLAEA----------QCNKV---- 180
Y M F G D+ F++ S A + L+ K++ A CN +
Sbjct: 116 QFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLY 175
Query: 181 -----------------QVNAVVYDNLLSVLVKHNKLDDAICLFRELMR----------- 212
+ + V +++++S + ++ LF+E+++
Sbjct: 176 MKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTM 235
Query: 213 ------SH----------------SHLETSTFNVLMGGL---CSAGDVDEAFKFLNGMRS 247
SH S +ET V+ L G+V A + NGM
Sbjct: 236 SALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAERIFNGM-- 293
Query: 248 FGCSPDIVTYNTLLHGLCRIKEVDRARDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMK 307
+IV +N ++ R V A +++ ++ P+V + ++ S +
Sbjct: 294 --IQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA----SAIL 347
Query: 308 EASSLFDEMDRSGTKPNAFTFNSLIDGFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLI 367
E ++ R G P+ +LID + + G + SA I+ +M +V+++ S+I
Sbjct: 348 EGRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVIFDRM----AEKNVISWNSII 403
Query: 368 EGYCRVGKVNYGLDLWHEMNTRNISASLHTFSVLISYLCKSNRLQEARDLLRQLKRTDIV 427
Y + GK L+L+ E+ ++ T + ++ +S L E R++ + ++
Sbjct: 404 AAYVQNGKNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYW 463
Query: 428 PQPSIYNHVIDGYCKSGNVDEANAIVVEMEEKCKPDKFTFTILIAGHCMKGRAPDAIVIF 487
I N ++ Y G++++A + K D ++ +I + + G ++ +F
Sbjct: 464 SNTIILNSLVHMYAMCGDLEDARKCFNHILLK---DVVSWNSIIMAYAVHGFGRISVWLF 520
Query: 488 YKMLATGCSPDEIT-VRILSSCLLKSGMPGEAARIKESLHENQG 530
+M+A+ +P++ T +L++C + SGM E ES+ G
Sbjct: 521 SEMIASRVNPNKSTFASLLAACSI-SGMVDEGWEYFESMKREYG 563
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 105/244 (43%), Gaps = 14/244 (5%)
Query: 214 HSHLETSTFNVLMGGLCSAGDVDEAFKFLNGMRSFGCSPDIVTYNTLLHGLCRIKEVDRA 273
H LET+ + M G C G + A + M +++++N+++ + + A
Sbjct: 364 HMVLETALID--MYGEC--GQLKSAEVIFDRM----AEKNVISWNSIIAAYVQNGKNYSA 415
Query: 274 RDLLKEVGLKSKFSPNVRSYTTVISGYCKLSKMKEASSLFDEMDRSGTKPNAFTFNSLID 333
+L +E+ S P+ + +++ Y + + E + + +S N NSL+
Sbjct: 416 LELFQEL-WDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVH 474
Query: 334 GFVKVGNMDSALGIYKKMLFHGCPPDVVTFTSLIEGYCRVGKVNYGLDLWHEMNTRNISA 393
+ G+++ A +K H DVV++ S+I Y G + L+ EM ++
Sbjct: 475 MYAMCGDLEDA----RKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNP 530
Query: 394 SLHTFSVLISYLCKSNRLQEARDLLRQLKRT-DIVPQPSIYNHVIDGYCKSGNVDEANAI 452
+ TF+ L++ S + E + +KR I P Y ++D ++GN A
Sbjct: 531 NKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590
Query: 453 VVEM 456
+ EM
Sbjct: 591 LEEM 594