Miyakogusa Predicted Gene

Lj4g3v2192550.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2192550.2 CUFF.50453.2
         (167 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G42700.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   127   5e-30
AT3G19184.1 | Symbols:  | AP2/B3-like transcriptional factor fam...   118   2e-27
AT5G58280.1 | Symbols:  | AP2/B3-like transcriptional factor fam...    94   6e-20

>AT5G42700.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:17122171-17124177 FORWARD LENGTH=211
          Length = 211

 Score =  127 bits (318), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 59/113 (52%), Positives = 74/113 (65%)

Query: 20  EAQSAALQRAKEIQAKLSPEFPSLLKCMHPSHVSGAFWLSLSTKFCQMHLPKADTIITLE 79
           E +  A+ RA + Q +L   +PS +K M  SHVSG FWL L  +FC+ HL   D +ITL 
Sbjct: 87  EIRDEAISRANKFQDELGSGYPSFVKSMLQSHVSGGFWLGLPVQFCKSHLGLHDGVITLI 146

Query: 80  DESGELYETKYIADKVALSGGWMRFSIAHNLHEMDVLIFHLVKPSKFKVYIVR 132
           DE GE YET Y+A K  LSGGWM F++AHNL   D L+F LV+ + FKVYI R
Sbjct: 147 DEEGEEYETIYLARKNGLSGGWMGFAVAHNLAYGDTLVFELVRRTAFKVYITR 199


>AT3G19184.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr3:6637555-6639035 FORWARD LENGTH=277
          Length = 277

 Score =  118 bits (295), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 53/113 (46%), Positives = 73/113 (64%)

Query: 20  EAQSAALQRAKEIQAKLSPEFPSLLKCMHPSHVSGAFWLSLSTKFCQMHLPKADTIITLE 79
           +A+  A  RA+++Q+ L  E+ S  K M  SHV+G FWL L   FC+ H+PK D I+TL 
Sbjct: 107 DARMYAFDRAEKLQSSLDSEYASFTKPMLQSHVTGGFWLGLPLPFCKAHMPKRDVIMTLV 166

Query: 80  DESGELYETKYIADKVALSGGWMRFSIAHNLHEMDVLIFHLVKPSKFKVYIVR 132
           DE  E  + KY+A K  LSGGW  F+I H L + D ++FHL+  + FKVYI+R
Sbjct: 167 DEEEEESQAKYLAQKNGLSGGWRGFAIDHQLVDGDAVVFHLIARTTFKVYIIR 219


>AT5G58280.1 | Symbols:  | AP2/B3-like transcriptional factor family
           protein | chr5:23567338-23568670 FORWARD LENGTH=273
          Length = 273

 Score = 93.6 bits (231), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 72/125 (57%)

Query: 18  NYEAQSAALQRAKEIQAKLSPEFPSLLKCMHPSHVSGAFWLSLSTKFCQMHLPKADTIIT 77
           +YE +  A + A++ Q  L    P  +K M  SHV   FWL L ++FC  + P+    I 
Sbjct: 102 SYEEKVGAFKAAEKFQRSLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCADNFPEETMEIE 161

Query: 78  LEDESGELYETKYIADKVALSGGWMRFSIAHNLHEMDVLIFHLVKPSKFKVYIVRSQGSD 137
           LEDE GE+YE  YI  +  LSGGW RF++ H L + D L+F LV+P KFK+Y+ +   + 
Sbjct: 162 LEDEEGEVYEAVYIGRRAGLSGGWKRFALDHKLDDGDALLFELVEPKKFKIYVFKGNENA 221

Query: 138 EVDGA 142
            +  A
Sbjct: 222 NLTSA 226