Miyakogusa Predicted Gene

Lj4g3v2192520.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2192520.1 Non Chatacterized Hit- tr|A5BGQ4|A5BGQ4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,78.57,5e-18,seg,NULL,CUFF.50450.1
         (118 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G42725.1 | Symbols:  | Putative membrane lipoprotein | chr3:1...    99   7e-22

>AT3G42725.1 | Symbols:  | Putative membrane lipoprotein |
           chr3:14843082-14843690 REVERSE LENGTH=202
          Length = 202

 Score = 98.6 bits (244), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 5/117 (4%)

Query: 1   MLALFTKEKASLTLLKSPRDPKEAKLLVRVECGALMAMCMLQMVVLVLSCAVHSCLVKDY 60
           +L LF++EK SL+LL S RDP+EAK LVRVECG  +AM  LQ++VLVL+C +H   V+++
Sbjct: 90  VLMLFSREKQSLSLLISTRDPREAKALVRVECGVFVAMIPLQIMVLVLACLLHCYWVREF 149

Query: 61  EGLXXXXXXXXXXXXXXXXXXQEESMANASKIAEVKDKEFDEKMNSKYGKWVKTDFE 117
           EGL                   E+  +     +++K  E DEKMN K+ +WVKTDFE
Sbjct: 150 EGLDVESEDSFRRKCNRRVSTAEDGTS-----SDLKKMELDEKMNVKHVQWVKTDFE 201