Miyakogusa Predicted Gene

Lj4g3v2180400.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2180400.1 tr|D3BCP8|D3BCP8_POLPA DENN domain-containing
protein OS=Polysphondylium pallidum GN=PPL_06274 PE=4
,33.66,4e-18,DENN,DENN domain; UDENN,uDENN domain; DDENN,dDENN domain;
seg,NULL; SUPPRESSION OF TUMORIGENICITY 5 ,CUFF.50466.1
         (823 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   485   e-137
AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein...   313   5e-85
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S...    69   2e-11
AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / S...    69   2e-11
AT1G49040.2 | Symbols: SCD1 | stomatal cytokinesis defective / S...    68   2e-11

>AT5G35560.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
           chr5:13742458-13747464 REVERSE LENGTH=765
          Length = 765

 Score =  485 bits (1249), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 240/388 (61%), Positives = 294/388 (75%), Gaps = 5/388 (1%)

Query: 438 DALETNKKSKDSHLPHAILPLLRNCQY--XXXXXXXXIQGSPCEDKNFRSEIDDNETEDA 495
           D+L   K+ ++S LP    PLLR C Y           Q +PCE ++ R+  DD ET++A
Sbjct: 379 DSLPIIKQGRESCLPEPG-PLLR-CPYLDEISDSSTSFQAAPCERRHSRTSADDTETDEA 436

Query: 496 SFSGQEDINDLNDILQWAKEHNHGPLQIISEYYRLSCPARGSTLTFXXXXXXXXXXYHRP 555
           SFSGQ+D +   DIL+WAK   +G LQI+ EYY+L CPARGST+TF          YHRP
Sbjct: 437 SFSGQDDTSSNFDILEWAKSKKNGSLQILCEYYQLKCPARGSTITFHPLEHLHPVEYHRP 496

Query: 556 AGTVPHLVGSTVDLKACNAGQELANAHNSLLVED-ATALSIWTVACICGILRLENVLTFF 614
                H  GS +DL++C+   ELA AH +L+ E+ A ALS W VA +CG LRL+NVL   
Sbjct: 497 NEVALHTPGSAIDLRSCSTSLELAEAHTTLMAEEEAAALSTWAVASLCGSLRLDNVLMIL 556

Query: 615 AAVLLEKQIVVLSSNLGILSASVLSVIPLIQPYRWQSLLMPVLPSDMHEFLDAPVPYVVG 674
           A  LLEKQIV + SNLGIL+ASVLS+IP+I+P+RWQSLLMPVLP DM EFLDAPVPY+VG
Sbjct: 557 AGALLEKQIVFVCSNLGILAASVLSIIPVIRPFRWQSLLMPVLPDDMLEFLDAPVPYIVG 616

Query: 675 ITNKNSEVQSKFANVILVDADRNQVKSPTIPQLPRQKELVSSLRSYHATLVGESYLGRRR 734
           + NK SEVQSK  NVI+VD  +NQVKSP++PQLP+ ++L ++L  YH+ LVGESYL ++R
Sbjct: 617 VKNKTSEVQSKLTNVIVVDILKNQVKSPSMPQLPQYRDLYNALSPYHSKLVGESYLAKKR 676

Query: 735 PVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITNVQSNDDKVSLLLKESFIDSFPY 794
           PVYECT+VQ++AAKGF+ VLRSYLDSLC N++SHTITNVQSN+DKVSLLLKESFIDSFP 
Sbjct: 677 PVYECTDVQVDAAKGFMDVLRSYLDSLCSNLQSHTITNVQSNNDKVSLLLKESFIDSFPS 736

Query: 795 RDRAFMKLFVDTQLFSVHTDLVLSFLQK 822
           R R FMKLFVDTQLFSVHTDLVLSF+QK
Sbjct: 737 RQRPFMKLFVDTQLFSVHTDLVLSFIQK 764



 Score =  339 bits (869), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 173/273 (63%), Positives = 207/273 (75%), Gaps = 7/273 (2%)

Query: 2   LKGFSRPPDVETTNYNPEILTSLKRQWAANFQLQHMDNQSWKEPSRLFESMVVVGLHPNS 61
           +K F   P  ++  YNPE+LTS KRQWA  FQ    D++  K+PSRLFES+VVVGLHPN 
Sbjct: 67  VKNFYETPKTKSVLYNPEVLTSQKRQWA-KFQ----DHKPLKDPSRLFESVVVVGLHPNC 121

Query: 62  DVQALQRQYVDREFEGS-GKLRSVLSYQNQSRVEPNIEPQVLFVYPPEKQLPLKCKDLLS 120
           D+QAL+RQY+ R+ EGS G+LRS L  QN SRVEP++EPQVL VYPP+KQ P+K KDL S
Sbjct: 122 DIQALERQYIARKSEGSSGRLRSALVSQNHSRVEPSLEPQVLLVYPPDKQPPIKYKDLHS 181

Query: 121 FCFPGGLEVRAVERTPSMSELKEIIFGQEHLKQRDLSFVFRLQGADNSILYGCCVLVEEL 180
           FCFPGG+EV AVERTPSMSEL EII  QEHL+  DLSFVFRLQ ADNS LYGCC+LVEE+
Sbjct: 182 FCFPGGIEVHAVERTPSMSELSEIILSQEHLRPSDLSFVFRLQVADNSTLYGCCLLVEEI 241

Query: 181 VQKPSGLLSLIPDKQPSYPSLRRHALITQRCYCILSRLPFFELHFGVLNSIFTQERLEWL 240
           V KPS LLS + DKQP+  SL R+ + T+RCYC+L+RLPFFELHFGVLNSIF +ERLE L
Sbjct: 242 VNKPSRLLSTVLDKQPACSSLSRYVMTTRRCYCVLTRLPFFELHFGVLNSIFLEERLEHL 301

Query: 241 TKSIGDLNLE-VFEGNYEDENSDSDPESVVVGD 272
              I   +LE   + + ED  +DS P+    GD
Sbjct: 302 MSGISCASLEPPTDFSNEDSLNDSSPQQRDSGD 334


>AT2G20320.1 | Symbols:  | DENN (AEX-3) domain-containing protein |
            chr2:8767082-8772271 FORWARD LENGTH=1029
          Length = 1029

 Score =  313 bits (801), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 165/346 (47%), Positives = 228/346 (65%), Gaps = 19/346 (5%)

Query: 487  IDDNETEDASFSGQEDI------------NDLND--ILQWAKEHNHGPLQIISEYYRLSC 532
            I+ NE+ ++ FS    +            ND  D  IL+WAK+HN+  LQ++  Y+ L+ 
Sbjct: 682  IERNESCESVFSSARSVLSDDVDELSNSENDFGDDLILEWAKDHNNDSLQLVCGYHSLAI 741

Query: 533  PARGSTLTFXXXXXXXXXXYHRPAGTVPHLVGSTVDLKACNAGQELANAHNSLLVEDATA 592
            P+RGS + F          Y RP  +   L    +    C++  +  NA  +   E+A  
Sbjct: 742  PSRGSEVVFHPLEHLQSISYTRPPVSALGLSEEYI----CSSDSKEINARLAA-AEEAMG 796

Query: 593  LSIWTVACICGILRLENVLTFFAAVLLEKQIVVLSSNLGILSASVLSVIPLIQPYRWQSL 652
            LS+WT A +C IL LE +++  A VLLEKQIV++  NLG+LSA VLS++P+I+P++WQSL
Sbjct: 797  LSMWTTATVCRILSLETIMSLLAGVLLEKQIVIICPNLGVLSAIVLSLVPMIRPFQWQSL 856

Query: 653  LMPVLPSDMHEFLDAPVPYVVGITNKNSEVQSKFANVILVDADRNQVKSPTIPQLPRQKE 712
            L+PVLP  M +FL+APVP++VGI +K  + + K +N+ILV+   NQVK   +P LP+ +E
Sbjct: 857  LLPVLPGRMFDFLEAPVPFLVGIHSKPIDWKVKTSNLILVNILNNQVKICNMPALPQCRE 916

Query: 713  LVSSLRSYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCYNIRSHTITN 772
            L++ L   HATL  +S   RR PVY+C EVQ EAA  FL V+R Y++SLC ++ SHTIT+
Sbjct: 917  LMAQLAPIHATLAHQSSNARRHPVYKCNEVQAEAATKFLRVMRDYMESLCSDLHSHTITS 976

Query: 773  VQSNDDKVSLLLKESFIDSFPYRDRAFMKLFVDTQLFSVHTDLVLS 818
            VQSN D+VSLLLK+SFIDSFP RDR F+KLFVDTQLFSV +D  LS
Sbjct: 977  VQSNSDRVSLLLKDSFIDSFPGRDRPFIKLFVDTQLFSVLSDSRLS 1022



 Score =  206 bits (523), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 99/239 (41%), Positives = 155/239 (64%), Gaps = 5/239 (2%)

Query: 15  NYNPEILTSLKRQWAANFQLQHMDNQSWKEPSRLFESMVVVGLHPNSDVQALQRQYVDRE 74
            +NPE+L + KRQW      + +D    KEP+ LFE  ++VGLHP ++++ ++  +  R+
Sbjct: 311 TFNPEVLANQKRQWYQLHSSKALDQTKLKEPASLFEHFIIVGLHPETNLRPVEEAFRRRK 370

Query: 75  -FEGSGKLRSVLSYQ---NQSRVEPNIEPQVLFVYPPEKQLPLKCKDLLSFCFPGGLEVR 130
            +E       V  Y+   ++    P +EPQ+LF YPP K++ ++ KDL +FCFPGG++ R
Sbjct: 371 KWEMEMSRYEVADYRILRHRGPQFPILEPQILFKYPPGKKVAMRPKDLATFCFPGGVKAR 430

Query: 131 AVERTPSMSELKEIIFGQEHLKQRDLSFVFRLQGADNSILYGCCVLVEELVQKPSGLLSL 190
            +ERTPS+S+L E+++GQEHL   D SF+F  + AD++ LYG C+ V E+VQ+P G+LS 
Sbjct: 431 LLERTPSLSDLNELVYGQEHLGTDDSSFIFSFKVADDATLYGVCLHVSEIVQRPPGVLST 490

Query: 191 IPDKQPSYPSLRRHALITQRCYCILSRLPFFELHFGVLNSIFTQERLEWLTKSIGDLNL 249
                 S     R  +   RCYC+L+R+PFFELHF +LNS+  QERL+ +T+ + +++L
Sbjct: 491 ASPLHSSGGG-SRFLVSAPRCYCLLTRVPFFELHFEMLNSMIAQERLKRITEFVSEMSL 548


>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18139419-18148826 REVERSE
           LENGTH=1187
          Length = 1187

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 1/105 (0%)

Query: 605 LRLENVLTFFAAVLLEKQIVVLSSNLGILSASVLSVIPLIQPYRWQSLLMPVLPSDMHEF 664
           L ++N++  F +VL+E++I++ S+   +L+    S+  LI P+RW  + +P+L     ++
Sbjct: 214 LDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVDY 273

Query: 665 LDAPVPYVVGITNKNSEVQSKFANVILVDADRNQV-KSPTIPQLP 708
           +DAP PY++G+ +           V++VD D NQ+  S  IPQ+P
Sbjct: 274 IDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIP 318


>AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18140457-18148826 REVERSE
           LENGTH=1040
          Length = 1040

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 1/105 (0%)

Query: 605 LRLENVLTFFAAVLLEKQIVVLSSNLGILSASVLSVIPLIQPYRWQSLLMPVLPSDMHEF 664
           L ++N++  F +VL+E++I++ S+   +L+    S+  LI P+RW  + +P+L     ++
Sbjct: 214 LDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVDY 273

Query: 665 LDAPVPYVVGITNKNSEVQSKFANVILVDADRNQV-KSPTIPQLP 708
           +DAP PY++G+ +           V++VD D NQ+  S  IPQ+P
Sbjct: 274 IDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIP 318


>AT1G49040.2 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
           protein (SCD1) | chr1:18142007-18148826 REVERSE
           LENGTH=909
          Length = 909

 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 63/105 (60%), Gaps = 1/105 (0%)

Query: 605 LRLENVLTFFAAVLLEKQIVVLSSNLGILSASVLSVIPLIQPYRWQSLLMPVLPSDMHEF 664
           L ++N++  F +VL+E++I++ S+   +L+    S+  LI P+RW  + +P+L     ++
Sbjct: 214 LDVDNLIKLFTSVLVERRILIRSNKYSLLTLVSESICHLIYPFRWLQVYIPLLFFSGVDY 273

Query: 665 LDAPVPYVVGITNKNSEVQSKFANVILVDADRNQV-KSPTIPQLP 708
           +DAP PY++G+ +           V++VD D NQ+  S  IPQ+P
Sbjct: 274 IDAPTPYMMGLHSDVDTSNLAMDGVVVVDLDINQITTSEEIPQIP 318