Miyakogusa Predicted Gene
- Lj4g3v2172780.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2172780.1 Non Chatacterized Hit- tr|E9IDD9|E9IDD9_SOLIN
Putative uncharacterized protein (Fragment) OS=Solenop,21.51,2e-18,WD
REPEAT PROTEIN,NULL; WD40 REPEAT PROTEIN,NULL; WD40,WD40 repeat; WD40
repeat-like,WD40-repeat-con,CUFF.50393.1
(370 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G19430.1 | Symbols: DWA1, THO6, AtTHO6 | DWD (DDB1-binding WD... 464 e-131
AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 68 1e-11
AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40 ... 65 8e-11
AT5G50230.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 60 2e-09
AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 2e-08
AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 57 3e-08
AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 | c... 55 5e-08
AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 55 8e-08
AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 | chr5:867... 54 1e-07
AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40 r... 54 2e-07
AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / S... 52 4e-07
AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein | chr... 51 1e-06
AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 51 1e-06
AT5G51980.2 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT5G51980.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 2e-06
AT3G05090.2 | Symbols: LRS1 | Transducin/WD40 repeat-like superf... 50 3e-06
AT3G05090.1 | Symbols: LRS1 | Transducin/WD40 repeat-like superf... 50 3e-06
AT3G49180.1 | Symbols: RID3 | Transducin/WD40 repeat-like superf... 50 3e-06
AT2G46290.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 50 3e-06
AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamil... 49 5e-06
AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / S... 48 9e-06
>AT2G19430.1 | Symbols: DWA1, THO6, AtTHO6 | DWD (DDB1-binding WD40
protein) hypersensitive to ABA 1 | chr2:8415217-8417740
FORWARD LENGTH=367
Length = 367
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 229/367 (62%), Positives = 287/367 (78%), Gaps = 5/367 (1%)
Query: 1 MCGDATNWDEDAYRESILKEREIQTQTVFRTAWAPP-QTPNLHSLIAASSDGSIAAYSIS 59
M GDATNW+ED YRESILKEREI+T+TVFRTAWAPP + N + + ASSDG++A +S++
Sbjct: 1 MYGDATNWNEDEYRESILKEREIETRTVFRTAWAPPARISNPDAFVVASSDGTLAFHSLN 60
Query: 60 AYNLNNPIGSVKSDTDELFAEPDCIFKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWR 119
+ + D + AEP+ + +AH+GPAYDVKFYG+ EDALLLSCGDDGRVRGW+
Sbjct: 61 SLVSQSASFGYSKGQDVMVAEPERVVRAHEGPAYDVKFYGEDEDALLLSCGDDGRVRGWK 120
Query: 120 WNGLTSSNCSGSSLGNDIKPVLDVVNPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGD 179
W S+ S N +KP+L+++NPQ KGPWGALSP+PE NA++V+ Q GS+F A+GD
Sbjct: 121 WREFAESDVSLHLKENHLKPLLELINPQHKGPWGALSPMPEINAMSVDPQSGSVFTAAGD 180
Query: 180 SCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSGKCIQLIN 239
SCAYCWDVE+GK+KM FKGHSDYLH +V+R++ +QI+TGSEDGTARIWDCK+GKC+++I
Sbjct: 181 SCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIG 240
Query: 240 PAKHLKLKGSVSCIGCIALDASESWLACSSGRNISLWNLPASECVSKISTRASVQDMLFD 299
K S + +ALD SESWL C G+N++LWNLPASECV I A VQD++FD
Sbjct: 241 SQD----KKSRLRVSSMALDGSESWLVCGQGKNLALWNLPASECVQTIPIPAHVQDVMFD 296
Query: 300 NNQILTVGADPLLNRFDMNGAILSQIQCAPPSAFSISLNPAGVMAVGGYGCLVDVISQFG 359
QILTVGA+PLL RFD+NGA+LSQI CAP S FSISL+PAGV+AVGGYG +VDVISQFG
Sbjct: 297 EKQILTVGAEPLLRRFDLNGALLSQIHCAPCSVFSISLHPAGVVAVGGYGGIVDVISQFG 356
Query: 360 SHMCTFH 366
SH+CTF
Sbjct: 357 SHLCTFR 363
>AT3G49660.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:18413690-18415223 FORWARD LENGTH=317
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 70/154 (45%), Gaps = 22/154 (14%)
Query: 85 FKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPVLDVV 144
+H+ VKF DG LL S D +R + N + ND P+ + V
Sbjct: 20 LTSHNRAVSSVKFSSDGR--LLASASADKTIRTYTINTI-----------ND--PIAEPV 64
Query: 145 NPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLH 204
+ G +S + A ++ I +AS D WDVETG L GH++Y
Sbjct: 65 Q-EFTGHENGISDV------AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAF 117
Query: 205 CIVARNTYNQIITGSEDGTARIWDCKSGKCIQLI 238
C+ N I++GS D T RIWD +GKC++++
Sbjct: 118 CVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVL 151
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 38/197 (19%)
Query: 84 IFKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPVLDV 143
+ AH P V F DG +L++S DG R W S G+ +K ++D
Sbjct: 150 VLPAHSDPVTAVDFNRDG--SLIVSSSYDGLCRIW-----------DSGTGHCVKTLIDD 196
Query: 144 VNPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYL 203
NP P+ + + + G I + D+ W++ + K + GH +
Sbjct: 197 ENP----------PV---SFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQ 243
Query: 204 HCIVARNTY---NQIITGSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDA 260
+CI + + +I++GSED +W+ S K +Q KL+G + +A
Sbjct: 244 YCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ--------KLEGHTETVMNVACHP 295
Query: 261 SESWLACSS-GRNISLW 276
+E+ +A S + + +W
Sbjct: 296 TENLIASGSLDKTVRIW 312
>AT1G73720.1 | Symbols: SMU1 | transducin family protein / WD-40
repeat family protein | chr1:27725059-27729722 FORWARD
LENGTH=511
Length = 511
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 102/244 (41%), Gaps = 43/244 (17%)
Query: 38 TPNLHSLIAASSDGSIAAYSISAYNLNNPIGSVKSDTDELFAEPDCIFKAHDGPAYDVKF 97
+P+ L ++S DG I + + G +K D L + D F HD P + F
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYIS-------GKLKKD---LQYQADESFMMHDDPVLCIDF 271
Query: 98 YGDGEDALLLSCGDDGRVRGWR-WNGLTSSNCSGSSLGNDIKPVLDVVNPQQKGPWGALS 156
D E +L S DG+++ WR G+ S G
Sbjct: 272 SRDSE--MLASGSQDGKIKIWRIRTGVCIRRFDAHSQGV--------------------- 308
Query: 157 PIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQII 216
+++ + G + + S D A +++GKL F+GH+ Y++ + + ++II
Sbjct: 309 -----TSLSFSRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRII 363
Query: 217 TGSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIAL--DASESWLACSSGRNIS 274
T S D T ++WD K+ C+Q P L+G+ + + I L +E + C+ +I
Sbjct: 364 TASSDCTVKVWDSKTTDCLQTFKPPP--PLRGTDASVNSIHLFPKNTEHIVVCNKTSSIY 421
Query: 275 LWNL 278
+ L
Sbjct: 422 IMTL 425
>AT5G50230.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:20448632-20450855 REVERSE LENGTH=509
Length = 509
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 102/240 (42%), Gaps = 47/240 (19%)
Query: 85 FKAHDGPAYDVKF-YGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPVLDV 143
AH+G + F Y G L + G D V+ W N T SLGN +LD
Sbjct: 221 IHAHEGGCGSIVFEYNSG---TLFTGGQDRAVKMWDTNSGTLIKSLYGSLGN----ILD- 272
Query: 144 VNPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYL 203
+AV S+ AA+ + + WDV +G+++ GH+D +
Sbjct: 273 --------------------MAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKV 312
Query: 204 HCI-VARNTYNQIITGSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASE 262
+ V++ + +++ + D T ++WD G C + L S C+++D
Sbjct: 313 CAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTV-------LFTSNCNAICLSIDG-- 363
Query: 263 SWLACSSGR---NISLWNLPASECVSKISTRASV---QDMLFDNNQILTVGADPLLNRFD 316
L SG N+ LW++ + +S+++ +S + + N+ILT G D + N FD
Sbjct: 364 --LTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVFD 421
>AT2G43770.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:18134272-18135303 REVERSE LENGTH=343
Length = 343
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 168 TQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLH-CIVARNTYNQIITGSEDGTARI 226
+ G I +AS D WDVETGK HS +++ C R II+GS+DGTA++
Sbjct: 106 SDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKL 165
Query: 227 WDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASESWLACSSGRNISLWNLPASECVSK 286
WD + IQ P K+ S S DA++ ++ +W+L E
Sbjct: 166 WDMRQRGAIQTF-PDKYQITAVSFS-------DAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 287 IS-TRASVQDMLF--DNNQILTVGADPLLNRFDM 317
+ + ++ M D + +LT G D L +DM
Sbjct: 218 LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDM 251
>AT5G64730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:25873146-25875021 FORWARD LENGTH=299
Length = 299
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 69/166 (41%), Gaps = 29/166 (17%)
Query: 76 ELFAEPDCIFKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGN 135
EL + I K H+G +F GDG AL +CG D +R W
Sbjct: 5 ELPTKEAHILKGHEGAVLAARFNGDGNYAL--TCGKDRTIRLW----------------- 45
Query: 136 DIKPVLDVVNPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMV 195
P ++ K S E + V + + GD Y WDV TG++
Sbjct: 46 --NPHRGILIKTYK------SHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRK 97
Query: 196 FKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSGKC--IQLIN 239
F+GH ++ + ++ + +++ D + R+WDC+S +Q+I+
Sbjct: 98 FRGHDGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIID 143
>AT4G15900.1 | Symbols: PRL1 | pleiotropic regulatory locus 1 |
chr4:9023775-9027443 FORWARD LENGTH=486
Length = 486
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 10/139 (7%)
Query: 173 IFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSG 232
+ DS WD+ T GH + + + R T Q++TGS D T + WD + G
Sbjct: 275 LLTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRYG 334
Query: 233 KCIQLINPAKHLKLKGSVSCIGCIALDASESWLACSSGRNISLWNLPASE-CVSKISTRA 291
K + + K + + L E+ A +S N ++LP E C + +S +
Sbjct: 335 KTMSTLTHHK--------KSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQK 386
Query: 292 SVQD-MLFDNNQILTVGAD 309
++ + M + + ++ G D
Sbjct: 387 TIINAMAVNEDGVMVTGGD 405
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 19/198 (9%)
Query: 158 IPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIIT 217
I + +AV+ + +F+A D CWD+E K+ + GH ++C+ T + ++T
Sbjct: 218 IEQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLT 277
Query: 218 GSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASESWLAC-SSGRNISLW 276
G D R+WD ++ I L G + + + ++ + S I W
Sbjct: 278 GGRDSVCRVWDIRTKMQI--------FALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFW 329
Query: 277 NLPASECVSKIS-TRASVQDMLF--DNNQILTVGADPL----LNRFDMNGAILSQIQCAP 329
+L + +S ++ + SV+ M N + AD L + + +LSQ +
Sbjct: 330 DLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKKFSLPKGEFCHNMLSQQKTI- 388
Query: 330 PSAFSISLNPAGVMAVGG 347
++++N GVM GG
Sbjct: 389 --INAMAVNEDGVMVTGG 404
>AT3G16650.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr3:5671133-5675106 FORWARD LENGTH=479
Length = 479
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 14/195 (7%)
Query: 158 IPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIIT 217
I + +AV+ + +F+A D CWD+E K+ + GH ++C+ T + ++T
Sbjct: 212 IGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLT 271
Query: 218 GSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASESWLACSSGRNISLWN 277
G D R+WD ++ I L +A + S I W+
Sbjct: 272 GGRDSVCRVWDIRTKMQI--------FVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD 323
Query: 278 LPASECVSKIST-RASVQDMLF--DNNQILTVGADPLLNRFDMNGAIL--SQIQCAPPSA 332
L + ++ I+ + +V+ M N ++ AD + +F + + +
Sbjct: 324 LRYGKSMATITNHKKTVRAMALHPKENDFVSASADN-IKKFSLPKGEFCHNMLSLQRDII 382
Query: 333 FSISLNPAGVMAVGG 347
++++N GVM GG
Sbjct: 383 NAVAVNEDGVMVTGG 397
>AT5G25150.1 | Symbols: TAF5 | TBP-associated factor 5 |
chr5:8677117-8682058 FORWARD LENGTH=669
Length = 669
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 36/207 (17%)
Query: 85 FKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPVLDVV 144
+K H+ P +D +F G SC D R W + + L + +D V
Sbjct: 456 YKGHNYPVWDAQFSPFGH--YFASCSHDRTARIWSMDRIQPLRIMAGHLSD-----VDCV 508
Query: 145 NPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLH 204
W P N IA S D WDV+TG+ +F GH +
Sbjct: 509 Q------WH-----PNCNYIAT---------GSSDKTVRLWDVQTGECVRIFIGHRSMVL 548
Query: 205 CIVARNTYNQIITGSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASESW 264
+ + +G EDGT +WD + +CI L G SC+ ++ S
Sbjct: 549 SLAMSPDGRYMASGDEDGTIMMWDLSTARCIT--------PLMGHNSCVWSLSYSGEGSL 600
Query: 265 LACSSGR-NISLWNLPASECVSKISTR 290
LA S + LW++ +S ++K +
Sbjct: 601 LASGSADCTVKLWDVTSSTKLTKAEEK 627
>AT5G16750.1 | Symbols: TOZ | Transducin family protein / WD-40
repeat family protein | chr5:5504541-5509266 REVERSE
LENGTH=876
Length = 876
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 86/197 (43%), Gaps = 44/197 (22%)
Query: 102 EDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPVLDVVNPQQKGPWGALSPIPEN 161
+D LL S G ++R W L + C S G++ PV+
Sbjct: 71 DDKLLFSAGHSRQIRVW---DLETLKCIRSWKGHE-GPVM-------------------- 106
Query: 162 NAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVAR--NTYNQIITGS 219
+A + GG + A D WDV+ G F+GH + I+ + N +I+GS
Sbjct: 107 -GMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHPDSNKNILISGS 165
Query: 220 EDGTARIWDCKS----GKCIQLINPAKHLKLKGSVSCIGCIALDASESWLAC-SSGRN-- 272
+D T R+WD + KC+ ++ KH S + IAL SE L S+GR+
Sbjct: 166 DDATVRVWDLNAKNTEKKCLAIME--KHF------SAVTSIAL--SEDGLTLFSAGRDKV 215
Query: 273 ISLWNLPASECVSKIST 289
++LW+L C + ++T
Sbjct: 216 VNLWDLHDYSCKATVAT 232
>AT1G49040.1 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
protein (SCD1) | chr1:18139419-18148826 REVERSE
LENGTH=1187
Length = 1187
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 171 GSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCK 230
G + AA D+ A WD+ +GK KGH+ ++ I R + +ITGS+D TAR+W
Sbjct: 993 GILAAAGRDTVANIWDIRSGKQMHKLKGHTKWIRSI--RMVEDTLITGSDDWTARVWSVS 1050
Query: 231 SGKC 234
G C
Sbjct: 1051 RGSC 1054
>AT5G67320.1 | Symbols: HOS15 | WD-40 repeat family protein |
chr5:26857268-26860974 FORWARD LENGTH=613
Length = 613
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 63/156 (40%), Gaps = 18/156 (11%)
Query: 81 PDCIFKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPV 140
P F H G VK+ D +LL SC DD + W N S+ +D++
Sbjct: 440 PAKTFTGHQGEVNCVKW--DPTGSLLASCSDDSTAKIW--------NIKQSTFVHDLREH 489
Query: 141 LDVVNPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHS 200
+ + P G + P ++ +AS DS WD E GK+ F GH
Sbjct: 490 TKEIYTIRWSPTGPGTNNPNKQL--------TLASASFDSTVKLWDAELGKMLCSFNGHR 541
Query: 201 DYLHCIVARNTYNQIITGSEDGTARIWDCKSGKCIQ 236
+ ++ + I +GS D + IW K GK ++
Sbjct: 542 EPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVK 577
>AT1G11160.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr1:3733406-3739363 FORWARD LENGTH=1021
Length = 1021
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 74/204 (36%), Gaps = 35/204 (17%)
Query: 85 FKAHDGPAYDVKFYGDGEDALLLSCGDDGRVRGWRWNGLTSSNCSGSSLGNDIKPVLDVV 144
F AH G + G LLL+ GDD +V W S+G P+
Sbjct: 11 FVAHSG-NVNCLSIGKKTSRLLLTGGDDYKVNLW-------------SIGKTTSPM---- 52
Query: 145 NPQQKGPWGALSPIPENNAIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLH 204
G SP+ +++A N++ + A + WD+E K+ F GH
Sbjct: 53 -----SLCGHTSPV---DSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCS 104
Query: 205 CIVARNTYNQIITGSEDGTARIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASESW 264
+ + +GS D R+WD + CIQ KG I I W
Sbjct: 105 AVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQ--------TYKGHTRGISTIEFSPDGRW 156
Query: 265 LACSSGRN-ISLWNLPASECVSKI 287
+ N + +W+L A + + +
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEF 180
>AT5G51980.2 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21113650-21115902 REVERSE LENGTH=443
Length = 443
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 20/134 (14%)
Query: 178 GDSCAY--CWDV-ETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSGKC 234
GD C Y CW E+ L GH + I + +++ TGS+D T R+WDC SG+C
Sbjct: 126 GDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Query: 235 IQLINPAKHLKLKGSVSCIGCIALDASESWLACSSGRNISLWNLPA------SECVSKIS 288
+ LKL G + C+ + WL + WN+ S V ++
Sbjct: 186 TGV------LKLGGEIGCV-----LSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVY 234
Query: 289 TRASVQDMLFDNNQ 302
+ D+LF Q
Sbjct: 235 SLVVGTDLLFAGTQ 248
>AT5G51980.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr5:21113650-21115902 REVERSE LENGTH=437
Length = 437
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 20/134 (14%)
Query: 178 GDSCAY--CWDV-ETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSGKC 234
GD C Y CW E+ L GH + I + +++ TGS+D T R+WDC SG+C
Sbjct: 126 GDKCRYLHCWSKGESFALLTQLDGHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQC 185
Query: 235 IQLINPAKHLKLKGSVSCIGCIALDASESWLACSSGRNISLWNLPA------SECVSKIS 288
+ LKL G + C+ + WL + WN+ S V ++
Sbjct: 186 TGV------LKLGGEIGCV-----LSEGPWLLVGMPNLVKAWNIETNADQSLSGPVGQVY 234
Query: 289 TRASVQDMLFDNNQ 302
+ D+LF Q
Sbjct: 235 SLVVGTDLLFAGTQ 248
>AT3G05090.2 | Symbols: LRS1 | Transducin/WD40 repeat-like
superfamily protein | chr3:1418573-1422723 REVERSE
LENGTH=753
Length = 753
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 163 AIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDG 222
A+A+N G + + + WD TG M +GH+D + ++ +T ++GS D
Sbjct: 218 ALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDS 277
Query: 223 TARIWDCKSGKCIQLI------------NPA-KHLKLKGSVSCIGCIALDASESWLACSS 269
R+WD +C+ NP+ H+ G C+ L ES L C+
Sbjct: 278 MIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTK 337
Query: 270 GRNI 273
I
Sbjct: 338 EHPI 341
>AT3G05090.1 | Symbols: LRS1 | Transducin/WD40 repeat-like
superfamily protein | chr3:1418573-1422723 REVERSE
LENGTH=753
Length = 753
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 13/124 (10%)
Query: 163 AIAVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDG 222
A+A+N G + + + WD TG M +GH+D + ++ +T ++GS D
Sbjct: 218 ALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDS 277
Query: 223 TARIWDCKSGKCIQLI------------NPA-KHLKLKGSVSCIGCIALDASESWLACSS 269
R+WD +C+ NP+ H+ G C+ L ES L C+
Sbjct: 278 MIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYLTDLATRESVLLCTK 337
Query: 270 GRNI 273
I
Sbjct: 338 EHPI 341
>AT3G49180.1 | Symbols: RID3 | Transducin/WD40 repeat-like
superfamily protein | chr3:18229810-18231874 FORWARD
LENGTH=438
Length = 438
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 73/172 (42%), Gaps = 32/172 (18%)
Query: 58 ISAYNLNNPIGS--VKSDTDELFAEPDCIFKAHDGPAYDVKFYGDGEDALLLSCGDDGRV 115
I++ +++ IGS +K+ T++L +P C AH A KF + L + G +
Sbjct: 6 IASSSIDEGIGSWDLKTGTEQLQFKP-CASPAHGLTAVGEKFLASSQ---LSARNTSGSI 61
Query: 116 RGWRWNGLTSSNCSGSSLGNDIKPVLDVVNPQQKGPWGALSPIPENNAIAVNTQGGSIFA 175
W W KP +V + P+ A+A N +G +
Sbjct: 62 FYWSWT----------------KPQAEVKS----------YPVEPIKALAANNEGTYLVG 95
Query: 176 ASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIW 227
Y W+V TGKL + GH + C+V + +++GS+DG+ R+W
Sbjct: 96 GGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVW 147
>AT2G46290.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr2:19005910-19007797 REVERSE LENGTH=355
Length = 355
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 14/118 (11%)
Query: 116 RGWRWNGLTSSNCSGSSLGNDIKPVLDVVNPQQKGPWGALSPIPENNAIAVNTQGGSIFA 175
G R+N + SS S +L ++P+L KG L+ + N G +F+
Sbjct: 9 EGLRFNQMKSS--SHQTLETRMRPIL------MKGHERPLT------FLRYNRNGDLLFS 54
Query: 176 ASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSGK 233
+ D W + G+ ++GHS + C +++ITGS D TA++WD KSGK
Sbjct: 55 CAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGK 112
>AT4G02730.1 | Symbols: | Transducin/WD40 repeat-like superfamily
protein | chr4:1207759-1209066 FORWARD LENGTH=333
Length = 333
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 175 AASGDSCAYCWDVETG-KLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTARIWDCKSGK 233
+AS D WD + + V +GH++++ C+ N I++GS D T RIW+ K+GK
Sbjct: 102 SASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Query: 234 CIQLI 238
C+++I
Sbjct: 162 CVRMI 166
>AT1G49040.3 | Symbols: SCD1 | stomatal cytokinesis defective / SCD1
protein (SCD1) | chr1:18140457-18148826 REVERSE
LENGTH=1040
Length = 1040
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 61/125 (48%), Gaps = 12/125 (9%)
Query: 165 AVNTQGGSIFAASGDSCAYCWDVETGKLKMVFKGHSDYLHCIVARNTYNQIITGSEDGTA 224
A+++ G I + S D WD +T +L KGH + C V + +++T + DGT
Sbjct: 904 AISSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSC-VKMLSGERVLTAAHDGTV 962
Query: 225 RIWDCKSGKCIQLINPAKHLKLKGSVSCIGCIALDASESWLACSSGRNI--SLWNLPASE 282
++WD ++ C+ + S I + D S LA ++GR+ ++W++ + +
Sbjct: 963 KMWDVRTDMCVATVGRCS--------SAILSLEYDDSTGILA-AAGRDTVANIWDIRSGK 1013
Query: 283 CVSKI 287
+ K+
Sbjct: 1014 QMHKL 1018