Miyakogusa Predicted Gene
- Lj4g3v2140310.2
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2140310.2 Non Chatacterized Hit- tr|D7TZZ5|D7TZZ5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.88,4e-19,seg,NULL,CUFF.50366.2
(146 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G55160.1 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 92 2e-19
AT1G55160.2 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 91 2e-19
AT1G55160.3 | Symbols: | unknown protein; FUNCTIONS IN: molecul... 78 2e-15
AT2G19530.1 | Symbols: | unknown protein; BEST Arabidopsis thal... 75 2e-14
>AT1G55160.1 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
plastid; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G19530.1);
Has 63 Blast hits to 63 proteins in 14 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:20578476-20579803 FORWARD LENGTH=188
Length = 188
Score = 91.7 bits (226), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 20/134 (14%)
Query: 15 KRCKFIWRLLMLSNLALGAFLFARAKRRDSMETHRRTAHKLHKGKTIXXXXXXXXXXXXR 74
+R K++W LL+ NLA+G +LF R K++D TA K
Sbjct: 69 RRYKYVWPLLLTVNLAVGGYLFFRTKKKDLDPVVEETAAK----------------SSSV 112
Query: 75 SMDINYDDFLVSA--ATPAEVRAR--IPEEQQREVFEWMLEEKRKVKPKDPAEKKQIDEE 130
+ + + L S A P ++AR IPE+QQRE+F+WMLEEKRKV PK+ EKK+ DEE
Sbjct: 113 AAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKWMLEEKRKVNPKNAEEKKRNDEE 172
Query: 131 KDILKDFLRAESLP 144
K ILK F+ ++++P
Sbjct: 173 KAILKQFIGSKTIP 186
>AT1G55160.2 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
plastid; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G19530.1);
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes -
2996 (source: NCBI BLink). | chr1:20578804-20579803
FORWARD LENGTH=137
Length = 137
Score = 91.3 bits (225), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 20/134 (14%)
Query: 15 KRCKFIWRLLMLSNLALGAFLFARAKRRDSMETHRRTAHKLHKGKTIXXXXXXXXXXXXR 74
+R K++W LL+ NLA+G +LF R K++D TA K
Sbjct: 18 RRYKYVWPLLLTVNLAVGGYLFFRTKKKDLDPVVEETAAK----------------SSSV 61
Query: 75 SMDINYDDFLVS--AATPAEVRAR--IPEEQQREVFEWMLEEKRKVKPKDPAEKKQIDEE 130
+ + + L S A P ++AR IPE+QQRE+F+WMLEEKRKV PK+ EKK+ DEE
Sbjct: 62 AAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQRELFKWMLEEKRKVNPKNAEEKKRNDEE 121
Query: 131 KDILKDFLRAESLP 144
K ILK F+ ++++P
Sbjct: 122 KAILKQFIGSKTIP 135
>AT1G55160.3 | Symbols: | unknown protein; FUNCTIONS IN:
molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: mitochondrion,
plastid; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G19530.1);
Has 63 Blast hits to 63 proteins in 14 species: Archae -
0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:20578476-20579803 FORWARD LENGTH=213
Length = 213
Score = 78.2 bits (191), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 77/159 (48%), Gaps = 45/159 (28%)
Query: 15 KRCKFIWRLLMLSNLALGAF-------------------------LFARAKRRDSMETHR 49
+R K++W LL+ NLA+G F LF R K++D
Sbjct: 69 RRYKYVWPLLLTVNLAVGGFCSSLDENRIVFSFIFMMLRVIYDSYLFFRTKKKDLDPVVE 128
Query: 50 RTAHKLHKGKTIXXXXXXXXXXXXRSMDINYDDFLVS--AATPAEVRAR--IPEEQQREV 105
TA K + + + L S A P ++AR IPE+QQRE+
Sbjct: 129 ETAAK----------------SSSVAAPVTVEKTLSSTVVAEPVVIKAREPIPEKQQREL 172
Query: 106 FEWMLEEKRKVKPKDPAEKKQIDEEKDILKDFLRAESLP 144
F+WMLEEKRKV PK+ EKK+ DEEK ILK F+ ++++P
Sbjct: 173 FKWMLEEKRKVNPKNAEEKKRNDEEKAILKQFIGSKTIP 211
>AT2G19530.1 | Symbols: | unknown protein; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G55160.2); Has 461 Blast hits to 346 proteins
in 80 species: Archae - 0; Bacteria - 16; Metazoa - 89;
Fungi - 28; Plants - 57; Viruses - 0; Other Eukaryotes -
271 (source: NCBI BLink). | chr2:8460219-8461486 FORWARD
LENGTH=202
Length = 202
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 78/173 (45%), Gaps = 36/173 (20%)
Query: 9 PPTGLLKRC-KFIWRLLMLSNLALGAFLFARAKRRD------------------------ 43
PP ++ + K WR M+ NL A++FA + +D
Sbjct: 10 PPQKVVSKLQKVGWRATMIFNLGFAAYIFAIKREKDIDADEKKKVKKGSEARHKGVKKGA 69
Query: 44 -SMETHRRTAHKLHKGKTIXXXXXXXXXXXX--------RSMDINYDDFLVSAATPAEVR 94
+ E ++ A + K K D + AT
Sbjct: 70 VNTEIEKKGAEETDKAKEAETAIPEKEETKLIPELDPLFEFTDATDQSMFQTVATEHVKV 129
Query: 95 AR--IPEEQQREVFEWMLEEKRKVKPKDPAEKKQIDEEKDILKDFLRAESLPK 145
AR IPE++Q+E+F+W+LEEKRK++PKD EKKQIDEEK ILK F+RAE +PK
Sbjct: 130 ARKPIPEDEQKELFKWILEEKRKIEPKDRKEKKQIDEEKAILKQFIRAERIPK 182