Miyakogusa Predicted Gene

Lj4g3v2140300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2140300.1 Non Chatacterized Hit- tr|I1MSH6|I1MSH6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57309
PE,88.67,0,PCI/PINT associated module,PCI/PINT associated module;
PCI,Proteasome component (PCI) domain; SUBFAM,CUFF.50372.1
         (415 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19560.1 | Symbols: EER5 | proteasome family protein | chr2:8...   624   e-179

>AT2G19560.1 | Symbols: EER5 | proteasome family protein |
           chr2:8465924-8469069 REVERSE LENGTH=413
          Length = 413

 Score =  624 bits (1610), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 302/415 (72%), Positives = 351/415 (84%), Gaps = 2/415 (0%)

Query: 1   MAYMNMSMGEAHRRITDYLNRFSDAVSSQDGASFKSLFALSSNSPFLLSLADAVALFHDA 60
           MAY+  SMGEAHRRIT+YLNRF DAVS QD ++   L + SSNSP LLSLADA+ +F D+
Sbjct: 1   MAYV--SMGEAHRRITEYLNRFCDAVSYQDSSTLCRLLSFSSNSPPLLSLADALNVFQDS 58

Query: 61  NRLINQSDSYSQFSDILLPLLRSVQNYKQGDFVEAYLAFEKTANAFIQEFRNWESAWALE 120
           + LI QSD +S++ +IL  + RS+Q+Y+ G+ VEAYLAF+K ANAF+QEFRNWESAWALE
Sbjct: 59  SSLIRQSDRFSEYGEILAHVFRSLQSYRVGNLVEAYLAFDKFANAFVQEFRNWESAWALE 118

Query: 121 ALYVIVHDIRVLAEKADKELASTGKSPEKLKGAGSFLMKVFGALAGKGSKRVGALYVTCQ 180
           ALYV+ ++IRVLAEKADK+L S GKSPEKLK AGS LMKVFG LAGKG KRVGALYVTCQ
Sbjct: 119 ALYVVCYEIRVLAEKADKDLTSNGKSPEKLKAAGSLLMKVFGVLAGKGPKRVGALYVTCQ 178

Query: 181 LFKIYFKLGTVHLCRSVIRSIETARIFDFEEFPKRDKVTYMYYTGRLEVFNENFPSADYK 240
           LFK YFKLGTV+LCRSVIRSIETARIFDFEEFP+RDKVTYMYYTGRLEVFNENFP+AD K
Sbjct: 179 LFKTYFKLGTVNLCRSVIRSIETARIFDFEEFPRRDKVTYMYYTGRLEVFNENFPAADTK 238

Query: 241 LSYALKHCNPQREANIRLILKHLIPVKLSIGILPNHRLLEKYSLLEYSNIVXXXXXXXXX 300
           LSYAL++CNP+RE NIR+ILK+L+PVKLS+GI+P   LL  Y+L EY+ IV         
Sbjct: 239 LSYALQNCNPKRERNIRMILKYLVPVKLSLGIIPKDELLRNYNLHEYTKIVQALRKGDLR 298

Query: 301 XXXXXXQDYEDRFLRSGVYLVLEKLELQVYQRLVKKIYIIQKQKDPSKAHQVKLEVIVKA 360
                 Q++EDRFLRSGVYLVLEKLELQVYQRL+KKIYI QK  DP++AHQ+KLE I KA
Sbjct: 299 LLRHALQEHEDRFLRSGVYLVLEKLELQVYQRLMKKIYINQKLSDPARAHQLKLEGIAKA 358

Query: 361 LKWLEIDMDVDEVECIMAILIYKNLMKGYFAHKSKVVVLSKTDPFPKLIGKPVNS 415
           L+WL++DMD+DEVECIM ILIYKNL+KGY AHKSKVVVLSK DPFPKL GKPV+S
Sbjct: 359 LRWLDMDMDLDEVECIMTILIYKNLVKGYLAHKSKVVVLSKQDPFPKLNGKPVSS 413