Miyakogusa Predicted Gene

Lj4g3v2139640.3

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2139640.3 Non Chatacterized Hit- tr|I1MSJ9|I1MSJ9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.632
PE=4,85.44,0,seg,NULL; CHOLINE MONOOXYGENASE,NULL; IRON-SULFUR DOMAIN
CONTAINING PROTEIN,NULL; Ring_hydroxyl_A,Ar,CUFF.50373.3
         (412 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29890.1 | Symbols:  | choline monooxygenase, putative (CMO-l...   508   e-144

>AT4G29890.1 | Symbols:  | choline monooxygenase, putative
           (CMO-like) | chr4:14608868-14610905 FORWARD LENGTH=422
          Length = 422

 Score =  508 bits (1307), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 232/367 (63%), Positives = 291/367 (79%), Gaps = 2/367 (0%)

Query: 45  QKLVKHFNPNIPIEEAVTPPTSWYTDPSFFQLELDRVFYRGWQAVGSTEQLKDPHDFFTG 104
            KLV  F+P IP+E A TPP+SWYTDP F+  ELDRVFY GWQAVG ++Q+K+  DFFTG
Sbjct: 55  SKLVTEFDPKIPLERASTPPSSWYTDPQFYSFELDRVFYGGWQAVGYSDQIKESRDFFTG 114

Query: 105 RLGDVEFVVCRDDSGKVCAFHNVCRHHASLLASGSGQKSCFVCPYHGWTYGLNGALLKAN 164
           RLGDV+FVVCRD++GK+ AFHNVC HHAS+LASG+G+KSCFVC YHGWTY L+G+L+KA 
Sbjct: 115 RLGDVDFVVCRDENGKIHAFHNVCSHHASILASGNGRKSCFVCLYHGWTYSLSGSLVKAT 174

Query: 165 RISGMRDFNVKDFGLIPIKVATWGPFVLLNLEKENLSQKEADHHN-VAEEWLGSCSEILS 223
           R+SG+++F++ + GL P++VA WGPFVLL +      + E +    VA EWLG+    LS
Sbjct: 175 RMSGIQNFSLSEMGLKPLRVAVWGPFVLLKVTAATSRKGEVETDELVASEWLGTSVGRLS 234

Query: 224 TNGVDSSLSYVCRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLASGLKLDSYSITMFXXX 283
             GVDS LSY+CRREYTIDCNWKVFCDNYLDGGYHVPYAHKGL SGL L++YS T+F   
Sbjct: 235 QGGVDSPLSYICRREYTIDCNWKVFCDNYLDGGYHVPYAHKGLMSGLDLETYSTTIFEKV 294

Query: 284 XXXXXXXXXXXXNGNYDRLGRKAIYAFIYPNFMINRYGPWMDTNLVLPLGPNKCQVVFDY 343
                          +DRLG +A+YAF+YPNFMINRYGPWMDTNLVLPLGP KC+VVFDY
Sbjct: 295 SIQECGGGSKVGEDGFDRLGSEALYAFVYPNFMINRYGPWMDTNLVLPLGPRKCKVVFDY 354

Query: 344 YLEHSLQDDKDFIEKSLQDSEKVQVEDIVLCEGVQKGLQSPAYFVGRYAPTVEQAMHHFH 403
           +L+ SL+DD+ FI++SL++S++VQ+ED++LCE VQ+GL+S AY  GRYA  VE+ MHHFH
Sbjct: 355 FLDPSLKDDEAFIKRSLEESDRVQMEDVMLCESVQRGLESQAYDKGRYA-LVEKPMHHFH 413

Query: 404 CLLYEDM 410
           CLL+ ++
Sbjct: 414 CLLHHNL 420