Miyakogusa Predicted Gene

Lj4g3v2139460.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2139460.1 Non Chatacterized Hit- tr|I1MH46|I1MH46_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26066
PE,87.43,0,seg,NULL; UNCHARACTERIZED,NULL; FPL,Uncharacterised protein
family FPL,TC62433.path2.1
         (175 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G28430.1 | Symbols:  | unknown protein; FUNCTIONS IN: molecul...   259   5e-70

>AT3G28430.1 | Symbols:  | unknown protein; FUNCTIONS IN:
           molecular_function unknown; INVOLVED IN:
           biological_process unknown; LOCATED IN: mitochondrion;
           EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6
           growth stages; CONTAINS InterPro DOMAIN/s: Protein of
           unknown function FPL (InterPro:IPR019155); Has 243 Blast
           hits to 233 proteins in 101 species: Archae - 0;
           Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
           Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).
           | chr3:10657441-10662404 REVERSE LENGTH=837
          Length = 837

 Score =  259 bits (663), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 126/175 (72%), Positives = 148/175 (84%), Gaps = 1/175 (0%)

Query: 1   MWYNSFWKSRDRFSLDQLRYLTDQLTKTQIVNEVNKDFVXXXXXXXXXXXXYGDQHDPSF 60
           MW  SF + RDRFSL +LRYLTDQL K QIVNE NKD V            YGDQHDP F
Sbjct: 1   MWL-SFLRPRDRFSLAELRYLTDQLRKIQIVNEANKDLVIEALRSIAEILTYGDQHDPLF 59

Query: 61  FEFFMEKQVMGEFVRILKLSRTVSVPLQLLQTVSIMVQNLKSEHAIYYMFSNEHVNYLIT 120
           FEFFMEKQVMGEFVRIL++S+TV+V +QLLQT+SIM+QNLKSE AIYY+FSNE+VNYLIT
Sbjct: 60  FEFFMEKQVMGEFVRILRVSKTVTVSVQLLQTMSIMIQNLKSEQAIYYLFSNEYVNYLIT 119

Query: 121 YSFDFRNEELLSYYISFLRAISGKLNRNTVSLLVRTHDDEVVSFPLYVEAIRFAF 175
           Y+FDF++EELLSYYISFLRA+SGKLN++T+SLL++T +D VVSFPLYVE I+FAF
Sbjct: 120 YTFDFQHEELLSYYISFLRAVSGKLNKHTISLLLKTENDVVVSFPLYVEGIQFAF 174