Miyakogusa Predicted Gene

Lj4g3v2139160.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2139160.1 Non Chatacterized Hit- tr|C0P3W2|C0P3W2_MAIZE
Uncharacterized protein OS=Zea mays PE=2 SV=1,43.96,0.000000000009,K
homology RNA-binding domain,K Homology domain; KH DOMAIN-CONTAINING
PROTEIN,NULL; KH DOMAIN CONTAI,CUFF.50329.1
         (403 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G26000.1 | Symbols: PEP | RNA-binding KH domain-containing pr...   421   e-118
AT3G04610.1 | Symbols: FLK | RNA-binding KH domain-containing pr...   283   2e-76
AT5G15270.1 | Symbols:  | RNA-binding KH domain-containing prote...    92   6e-19
AT5G15270.2 | Symbols:  | RNA-binding KH domain-containing prote...    92   6e-19
AT1G51580.1 | Symbols:  | RNA-binding KH domain-containing prote...    89   6e-18
AT5G64390.3 | Symbols: HEN4 | RNA-binding KH domain-containing p...    87   2e-17
AT5G64390.2 | Symbols: HEN4 | RNA-binding KH domain-containing p...    87   2e-17
AT5G64390.1 | Symbols: HEN4 | RNA-binding KH domain-containing p...    87   2e-17
AT1G14170.3 | Symbols:  | RNA-binding KH domain-containing prote...    80   3e-15
AT1G14170.1 | Symbols:  | RNA-binding KH domain-containing prote...    80   4e-15
AT1G14170.2 | Symbols:  | RNA-binding KH domain-containing prote...    79   4e-15
AT4G18375.1 | Symbols:  | RNA-binding KH domain-containing prote...    78   1e-14
AT4G18375.2 | Symbols:  | RNA-binding KH domain-containing prote...    78   1e-14
AT5G46190.1 | Symbols:  | RNA-binding KH domain-containing prote...    76   3e-14
AT5G53060.1 | Symbols:  | RNA-binding KH domain-containing prote...    69   6e-12
AT2G22600.1 | Symbols:  | RNA-binding KH domain-containing prote...    68   9e-12
AT5G09560.1 | Symbols:  | RNA-binding KH domain-containing prote...    57   2e-08

>AT4G26000.1 | Symbols: PEP | RNA-binding KH domain-containing
           protein | chr4:13197280-13199539 FORWARD LENGTH=495
          Length = 495

 Score =  421 bits (1083), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 214/365 (58%), Positives = 271/365 (74%), Gaps = 7/365 (1%)

Query: 29  DKRWPGWPGHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLV 88
           ++RWPGWPG CV+R+IVPV KVG+IIGRKG+ IKK CEETRARI+VLD P+ TPDRIVL+
Sbjct: 64  EERWPGWPGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI 123

Query: 89  SGKEEPEAPLSPAMDAVIRIFKRVSGLAEIE----AAPGATFCSVRLLVASTQAINLIGK 144
           SGKEEPEA +SPAMDAV+R+F+RVSGL + +       G+ F SVRLLVASTQAINLIGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183

Query: 145 QGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLV 204
           QGSLIKSI E++GA+VR+L+ +E P YAA DERIV++QGE LK+LKALEA+VGHLR+FLV
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243

Query: 205 DHTVLPLFEKPGNATISQDRQTDAWAD-KPSLHSASQTSIVADIPLSNKRDSFYADREXX 263
           DHTV+PLFEK   A +SQ RQ +  A+ K SLH+ S   +  D  L  +R+  + +R+  
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSLLARREPLFLERDSR 303

Query: 264 XXXXXXXXXXXLYGQDXXXXXXXXXXXXXXTPPIVTTVIQTMQIPLSYAEDIIGMQGSNI 323
                      +Y QD              +   VT V QTMQIP SYAEDIIG++G+NI
Sbjct: 304 VDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANI 363

Query: 324 DYIRRTSGAILTVQESRVPDEIIVEIKGTSSQVQIAQQLIQDVITHHQEPVASS--YSRL 381
            YIRR SGA +T++ES  PD+I VEIKGT+SQVQ A+QLIQ+ I +H+EPV+ S  Y+R+
Sbjct: 364 AYIRRRSGATITIKESPHPDQITVEIKGTTSQVQTAEQLIQEFIINHKEPVSVSGGYARI 423

Query: 382 DAGRI 386
           D+G +
Sbjct: 424 DSGYV 428


>AT3G04610.1 | Symbols: FLK | RNA-binding KH domain-containing
           protein | chr3:1250762-1254272 REVERSE LENGTH=577
          Length = 577

 Score =  283 bits (723), Expect = 2e-76,   Method: Compositional matrix adjust.
 Identities = 165/358 (46%), Positives = 217/358 (60%), Gaps = 28/358 (7%)

Query: 29  DKRWPGWPGHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLV 88
           +KRWPGWPG  V+R++VP  KVGSIIGRKG++IKK  EETRARI++LD P GT +R V+V
Sbjct: 177 EKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV 236

Query: 89  SGKEEPEAPLSPAMDAVIRIFKR-VSGL-AEIEAAPGATFCSVRLLVASTQAINLIGKQG 146
           SGKEEPE+ L P+MD ++R+  R V GL  E   AP  +  S RLLV ++QA +LIGKQG
Sbjct: 237 SGKEEPESSLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQG 296

Query: 147 SLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDH 206
             +K+IQE++   VRVL  ++LP +A  D+R+VEV GEP  V +ALE +  HLRKFLVD 
Sbjct: 297 GTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356

Query: 207 TVLPLFEKPGNATISQDRQTD-------AWADKPSLHSAS------QTSIVADIPLSNKR 253
           +++P FE   N      RQ D       +W   P  H+ S        +    +    + 
Sbjct: 357 SIIPFFE---NQMQKPTRQMDHMPPPHQSWG-PPQGHAPSVGGGGYGHNPPPYMQPPPRH 412

Query: 254 DSFYADREXXXXXXXXXXXXXL--YGQDXXXXXXXXXXXXXXTPPIVT-TVIQTMQIPLS 310
           DS+Y   E             +  YG++               PP+V   V Q MQIPLS
Sbjct: 413 DSYYPPPEMRQPPMEKQPHQGISAYGRE-----PPMNVHVSSAPPMVAQQVTQQMQIPLS 467

Query: 311 YAEDIIGMQGSNIDYIRRTSGAILTVQESR-VPDEIIVEIKGTSSQVQIAQQLIQDVI 367
           YA+ +IG  GSNI Y RR SGA +T+QE+R VP E+ VE+ GT SQVQ A QLIQ+ +
Sbjct: 468 YADAVIGTSGSNISYTRRLSGATVTIQETRGVPGEMTVEVSGTGSQVQTAVQLIQNFM 525


>AT5G15270.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:4958738-4960947 FORWARD LENGTH=548
          Length = 548

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 99/171 (57%), Gaps = 9/171 (5%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLV-------SGKE 92
           V+R + PV K+GS+IGR G+++K+   +TR++IR+ +A  G  +R++ +       +   
Sbjct: 51  VFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFG 110

Query: 93  EPEAPLSPAMDAVIRIFKR-VSGLAEIEAAP-GATFCSVRLLVASTQAINLIGKQGSLIK 150
           + E  LSPA DA+ RI  R V+  A  E +P G    + +LLV S Q   ++G+ G +++
Sbjct: 111 DGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQ 170

Query: 151 SIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRK 201
           +I+  TGA +R++    +P  A   + ++++ GE L V KAL  +   L +
Sbjct: 171 NIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221



 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 2/165 (1%)

Query: 42  RIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSPA 101
           R++ PV  + S+IG+ G LI +  +ETRA I+V  +     D ++ +S +E  E   SP 
Sbjct: 287 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPT 346

Query: 102 MDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVR 161
           ++AV+R+  + S   ++E   G    + RLLV S++   ++GK G++I  ++  T A +R
Sbjct: 347 IEAVMRLQPKCS--DKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIR 404

Query: 162 VLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDH 206
           +L  + LP  A+ D+ +V++ GE     +AL  +   LR  + D 
Sbjct: 405 ILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR 449


>AT5G15270.2 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:4958738-4960947 FORWARD LENGTH=548
          Length = 548

 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 56/171 (32%), Positives = 99/171 (57%), Gaps = 9/171 (5%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLV-------SGKE 92
           V+R + PV K+GS+IGR G+++K+   +TR++IR+ +A  G  +R++ +       +   
Sbjct: 51  VFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFG 110

Query: 93  EPEAPLSPAMDAVIRIFKR-VSGLAEIEAAP-GATFCSVRLLVASTQAINLIGKQGSLIK 150
           + E  LSPA DA+ RI  R V+  A  E +P G    + +LLV S Q   ++G+ G +++
Sbjct: 111 DGEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQ 170

Query: 151 SIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRK 201
           +I+  TGA +R++    +P  A   + ++++ GE L V KAL  +   L +
Sbjct: 171 NIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALLQIASRLHE 221



 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/165 (31%), Positives = 92/165 (55%), Gaps = 2/165 (1%)

Query: 42  RIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSPA 101
           R++ PV  + S+IG+ G LI +  +ETRA I+V  +     D ++ +S +E  E   SP 
Sbjct: 287 RLVSPVENIASVIGKGGALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPT 346

Query: 102 MDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVR 161
           ++AV+R+  + S   ++E   G    + RLLV S++   ++GK G++I  ++  T A +R
Sbjct: 347 IEAVMRLQPKCS--DKVERDSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIR 404

Query: 162 VLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDH 206
           +L  + LP  A+ D+ +V++ GE     +AL  +   LR  + D 
Sbjct: 405 ILGKENLPKVASDDDEMVQISGELDVAKEALIQITSRLRANVFDR 449


>AT1G51580.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:19125612-19128102 FORWARD LENGTH=621
          Length = 621

 Score = 89.0 bits (219), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 56/164 (34%), Positives = 90/164 (54%), Gaps = 4/164 (2%)

Query: 41  YRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSP 100
           +R++ P  KVGS+IG+ G +++    E+ A I+V D    + +RI+++S +E  E   S 
Sbjct: 278 FRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSL 337

Query: 101 AMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 160
           A D V+R+  R+    EI   P A   + RLLV S     L+GK G LI  ++ +TGA++
Sbjct: 338 AQDGVMRVHNRI---VEIGFEPSAAVVA-RLLVHSPYIGRLLGKGGHLISEMRRATGASI 393

Query: 161 RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLV 204
           RV   D+   Y +  + IV+V G    V  AL  ++  LR+ + 
Sbjct: 394 RVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQILCRLREAMF 437



 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 49/206 (23%)

Query: 41  YRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDA-PLGTPDRIVLV----------- 88
           +R++ P  + G+IIG+ G +I+     T ++IRV+D  P+ + +R+VL+           
Sbjct: 21  FRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDES 80

Query: 89  -------SGKEEP-----------------EAPLSPAMDAVIRIFKR---------VSGL 115
                   G EEP                 EAP S  M A++R+F+R         V G 
Sbjct: 81  NVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQM-ALLRVFERIVFGDDAATVDG- 138

Query: 116 AEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAAD 175
            E++       C  R++V   Q   L+ K G +I+ I+E +GA VR+ + D++P  A   
Sbjct: 139 DELDKGESEGLC--RMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196

Query: 176 ERIVEVQGEPLKVLKALEAVVGHLRK 201
           + ++++ G+   V KAL  V   L++
Sbjct: 197 DVVIQMNGKFSSVKKALLLVTNCLQE 222


>AT5G64390.3 | Symbols: HEN4 | RNA-binding KH domain-containing
           protein | chr5:25743442-25747380 FORWARD LENGTH=866
          Length = 866

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 28/180 (15%)

Query: 37  GHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEA 96
           GH  +R++ P+  VG++IG+ G +IK+  + T A+IRV + P G+PDR++ +  + + ++
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 97  PL---------------------SPAMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVAS 135
            +                     S A  A+I++F+    L   EA      C  RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----LLAAEADSDTVVC--RLLTES 158

Query: 136 TQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAV 195
           + A  +IGK G ++ SI++ TG  + +   + LP  A  D+ +VEV+G  + V KAL ++
Sbjct: 159 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217



 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 108/197 (54%), Gaps = 5/197 (2%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLS 99
           V++I+      G +IG  G++++    ET A I V +      +R++ V+  E PE   S
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512

Query: 100 PAMDAVIRIFKRVSGLAE---IEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQEST 156
           PA  A++ IF R+  LA    ++  P ++  + RL+V ++Q   ++GK G ++  ++++T
Sbjct: 513 PAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVVPTSQIGCVLGKGGVIVSEMRKTT 571

Query: 157 GAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFEKPG 216
           GAA+++L  ++ P   + ++++V++ GE   V +A+  +   LR  +  +++     K  
Sbjct: 572 GAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS 631

Query: 217 NATISQDRQTDAWADKP 233
           +A ++ +R  D  +D P
Sbjct: 632 SA-LTTERFYDRQSDNP 647


>AT5G64390.2 | Symbols: HEN4 | RNA-binding KH domain-containing
           protein | chr5:25743442-25746742 FORWARD LENGTH=824
          Length = 824

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 28/180 (15%)

Query: 37  GHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEA 96
           GH  +R++ P+  VG++IG+ G +IK+  + T A+IRV + P G+PDR++ +  + + ++
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 97  PL---------------------SPAMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVAS 135
            +                     S A  A+I++F+    L   EA      C  RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----LLAAEADSDTVVC--RLLTES 158

Query: 136 TQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAV 195
           + A  +IGK G ++ SI++ TG  + +   + LP  A  D+ +VEV+G  + V KAL ++
Sbjct: 159 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217



 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 108/197 (54%), Gaps = 5/197 (2%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLS 99
           V++I+      G +IG  G++++    ET A I V +      +R++ V+  E PE   S
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512

Query: 100 PAMDAVIRIFKRVSGLAE---IEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQEST 156
           PA  A++ IF R+  LA    ++  P ++  + RL+V ++Q   ++GK G ++  ++++T
Sbjct: 513 PAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVVPTSQIGCVLGKGGVIVSEMRKTT 571

Query: 157 GAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFEKPG 216
           GAA+++L  ++ P   + ++++V++ GE   V +A+  +   LR  +  +++     K  
Sbjct: 572 GAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS 631

Query: 217 NATISQDRQTDAWADKP 233
           +A ++ +R  D  +D P
Sbjct: 632 SA-LTTERFYDRQSDNP 647


>AT5G64390.1 | Symbols: HEN4 | RNA-binding KH domain-containing
           protein | chr5:25743442-25747380 FORWARD LENGTH=857
          Length = 857

 Score = 87.4 bits (215), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 95/180 (52%), Gaps = 28/180 (15%)

Query: 37  GHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEA 96
           GH  +R++ P+  VG++IG+ G +IK+  + T A+IRV + P G+PDR++ +  + + ++
Sbjct: 45  GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKS 104

Query: 97  PL---------------------SPAMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVAS 135
            +                     S A  A+I++F+    L   EA      C  RLL  S
Sbjct: 105 RVKLGANNNGNAEGEKKEEEVEVSKAQGALIKVFE----LLAAEADSDTVVC--RLLTES 158

Query: 136 TQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAV 195
           + A  +IGK G ++ SI++ TG  + +   + LP  A  D+ +VEV+G  + V KAL ++
Sbjct: 159 SHAGAVIGKGGQMVGSIRKETGCKISIRI-ENLPICADTDDEMVEVEGNAIAVKKALVSI 217



 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 108/197 (54%), Gaps = 5/197 (2%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLS 99
           V++I+      G +IG  G++++    ET A I V +      +R++ V+  E PE   S
Sbjct: 453 VFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASENPECQSS 512

Query: 100 PAMDAVIRIFKRVSGLAE---IEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQEST 156
           PA  A++ IF R+  LA    ++  P ++  + RL+V ++Q   ++GK G ++  ++++T
Sbjct: 513 PAQKAIMLIFSRLFELATNKILDNGPRSSI-TARLVVPTSQIGCVLGKGGVIVSEMRKTT 571

Query: 157 GAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFEKPG 216
           GAA+++L  ++ P   + ++++V++ GE   V +A+  +   LR  +  +++     K  
Sbjct: 572 GAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVFSNSMKNSLAKSS 631

Query: 217 NATISQDRQTDAWADKP 233
           +A ++ +R  D  +D P
Sbjct: 632 SA-LTTERFYDRQSDNP 647


>AT1G14170.3 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:4843463-4845253 REVERSE LENGTH=479
          Length = 479

 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 5/154 (3%)

Query: 60  LIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSPAMDAVIRIFKRVSGLAEIE 119
            I +  +ET A IRV  +     D I+ +S KE  E   SPA++A IR+ +R S     +
Sbjct: 290 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKD 348

Query: 120 AAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIV 179
           A   A   S RLLV+S+Q   LIGK G++I  ++  T A +R+L  +++P  A  DE +V
Sbjct: 349 ANDLAI--STRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMV 406

Query: 180 EVQGEPLKVLKALEAVVGHLR--KFLVDHTVLPL 211
           ++ G P   +KAL  V+  LR   F +DH ++ L
Sbjct: 407 QITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 440



 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 17/176 (9%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIV-LVSGKEEPE--- 95
           VYR + PV K GSIIG+ GE+ K+   ET++ +R+ +A  G  +R+V + S  EE     
Sbjct: 45  VYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFG 104

Query: 96  ---APLSPAMDAVIRIFKRVSGLAEIEAAPGATF-------CSVRLLVASTQAINLIGKQ 145
                + PA+DA+ ++   V   A+ +               +VR+LV S Q   +IGK 
Sbjct: 105 DDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKG 164

Query: 146 GSLIKSIQESTGAAVRVLTGDELPSYA--AADERIVEVQGEPLKVLKALEAVVGHL 199
           G +I++++  T A +RV+  D LP+ A   + + ++ + GEPL V +AL  V   L
Sbjct: 165 GQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 219


>AT1G14170.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:4843463-4845253 REVERSE LENGTH=454
          Length = 454

 Score = 79.7 bits (195), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 5/154 (3%)

Query: 60  LIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSPAMDAVIRIFKRVSGLAEIE 119
            I +  +ET A IRV  +     D I+ +S KE  E   SPA++A IR+ +R S     +
Sbjct: 265 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKD 323

Query: 120 AAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIV 179
           A   A   S RLLV+S+Q   LIGK G++I  ++  T A +R+L  +++P  A  DE +V
Sbjct: 324 ANDLAI--STRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMV 381

Query: 180 EVQGEPLKVLKALEAVVGHLR--KFLVDHTVLPL 211
           ++ G P   +KAL  V+  LR   F +DH ++ L
Sbjct: 382 QITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 415



 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 17/176 (9%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIV-LVSGKEEPE--- 95
           VYR + PV K GSIIG+ GE+ K+   ET++ +R+ +A  G  +R+V + S  EE     
Sbjct: 20  VYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFG 79

Query: 96  ---APLSPAMDAVIRIFKRVSGLAEIEAAPGATF-------CSVRLLVASTQAINLIGKQ 145
                + PA+DA+ ++   V   A+ +               +VR+LV S Q   +IGK 
Sbjct: 80  DDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKG 139

Query: 146 GSLIKSIQESTGAAVRVLTGDELPSYA--AADERIVEVQGEPLKVLKALEAVVGHL 199
           G +I++++  T A +RV+  D LP+ A   + + ++ + GEPL V +AL  V   L
Sbjct: 140 GQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 194


>AT1G14170.2 | Symbols:  | RNA-binding KH domain-containing protein
           | chr1:4843463-4845253 REVERSE LENGTH=446
          Length = 446

 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/154 (37%), Positives = 86/154 (55%), Gaps = 5/154 (3%)

Query: 60  LIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSPAMDAVIRIFKRVSGLAEIE 119
            I +  +ET A IRV  +     D I+ +S KE  E   SPA++A IR+ +R S     +
Sbjct: 257 FINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKD 315

Query: 120 AAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIV 179
           A   A   S RLLV+S+Q   LIGK G++I  ++  T A +R+L  +++P  A  DE +V
Sbjct: 316 ANDLAI--STRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMV 373

Query: 180 EVQGEPLKVLKALEAVVGHLR--KFLVDHTVLPL 211
           ++ G P   +KAL  V+  LR   F +DH ++ L
Sbjct: 374 QITGSPDAAMKALTQVILRLRANSFDMDHGLVLL 407



 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/176 (32%), Positives = 94/176 (53%), Gaps = 17/176 (9%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIV-LVSGKEEPE--- 95
           VYR + PV K GSIIG+ GE+ K+   ET++ +R+ +A  G  +R+V + S  EE     
Sbjct: 12  VYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFG 71

Query: 96  ---APLSPAMDAVIRIFKRVSGLAEIEAAPGATF-------CSVRLLVASTQAINLIGKQ 145
                + PA+DA+ ++   V   A+ +               +VR+LV S Q   +IGK 
Sbjct: 72  DDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKG 131

Query: 146 GSLIKSIQESTGAAVRVLTGDELPSYA--AADERIVEVQGEPLKVLKALEAVVGHL 199
           G +I++++  T A +RV+  D LP+ A   + + ++ + GEPL V +AL  V   L
Sbjct: 132 GQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALYQVASLL 186


>AT4G18375.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr4:10152825-10154836 FORWARD LENGTH=532
          Length = 532

 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 95/182 (52%), Gaps = 22/182 (12%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLV--SGKEEPE-- 95
           VYRI+ P+  VG +IG+ G++I      T+A+I+V D   G   R++ +  S KE+ E  
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 96  -------APLSPAMDAVIRIFKRVSGLAEIEAAPGATFCS------VRLLVASTQAINLI 142
                   PL  A DA+++++  +  +A  E     T          RLLV  +Q+ +LI
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAI--VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLI 154

Query: 143 GKQGSLIKSIQESTGAAVRVLTGD-ELPSYAAADE--RIVEVQGEPLKVLKALEAVVGHL 199
           GK G  IK I+  T A+V+V++ D   PS+  A E   +V + GEP  V +AL AV   +
Sbjct: 155 GKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIM 214

Query: 200 RK 201
            K
Sbjct: 215 YK 216



 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDA--PLGTPDRIVLVSGKEEPEAP 97
           V++++ P+  +  +IG+ G  IK+  E + + I V D+    G  + +++V+  E P+  
Sbjct: 313 VFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDM 372

Query: 98  LSPAMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTG 157
            S A++AV+        L E      A    ++LLV+S     +IGK GS+I  I++ T 
Sbjct: 373 KSMAVEAVLL-------LQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTN 425

Query: 158 AAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRK 201
           A + +  G +        + +VEV GE   V  AL  +V  LR+
Sbjct: 426 ANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLRE 461


>AT4G18375.2 | Symbols:  | RNA-binding KH domain-containing protein
           | chr4:10152825-10155125 FORWARD LENGTH=606
          Length = 606

 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/183 (33%), Positives = 95/183 (51%), Gaps = 22/183 (12%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLV--SGKEEPE-- 95
           VYRI+ P+  VG +IG+ G++I      T+A+I+V D   G   R++ +  S KE+ E  
Sbjct: 37  VYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEI 96

Query: 96  -------APLSPAMDAVIRIFKRVSGLAEIEAAPGATFC------SVRLLVASTQAINLI 142
                   PL  A DA+++++  +  +A  E     T          RLLV  +Q+ +LI
Sbjct: 97  GFTKSENEPLCCAQDALLKVYDAI--VASDEENNTKTNVDRDDNKECRLLVPFSQSSSLI 154

Query: 143 GKQGSLIKSIQESTGAAVRVLTGD-ELPSYAAADE--RIVEVQGEPLKVLKALEAVVGHL 199
           GK G  IK I+  T A+V+V++ D   PS+  A E   +V + GEP  V +AL AV   +
Sbjct: 155 GKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQALFAVSAIM 214

Query: 200 RKF 202
            K 
Sbjct: 215 YKI 217



 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 17/164 (10%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDA--PLGTPDRIVLVSGKEEPEAP 97
           V++++ P+  +  +IG+ G  IK+  E + + I V D+    G  + +++V+  E P+  
Sbjct: 313 VFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDM 372

Query: 98  LSPAMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTG 157
            S A++AV+        L E      A    ++LLV+S     +IGK GS+I  I++ T 
Sbjct: 373 KSMAVEAVLL-------LQEYINDEDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTN 425

Query: 158 AAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRK 201
           A + +  G +        + +VEV GE   V  AL  +V  LR+
Sbjct: 426 ANICISKGKK--------DDLVEVSGEVSSVRDALIQIVLRLRE 461


>AT5G46190.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:18723435-18725834 REVERSE LENGTH=644
          Length = 644

 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 98/185 (52%), Gaps = 25/185 (13%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVL----VSGKE--- 92
           VYRI+ P   +GS+IG+ G++I    +ETRARI+V+D   G  +R++     VS K+   
Sbjct: 45  VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVITIFCSVSEKKDIV 104

Query: 93  -------EPEAPLSPAMDAVIRIFKRVSGLAEIEAAPGAT------FCSVRLLVASTQAI 139
                  +   PL  A  A++++   +  +A +  A   T      F   RLLV S+Q  
Sbjct: 105 DIEYSELDYSVPLCSAQAALLKVHDAI--VASLATAAENTKIDRDDFRECRLLVPSSQCS 162

Query: 140 NLIGKQGSLIKSIQESTGAAVRVLTGD-ELPSYAAA--DERIVEVQGEPLKVLKALEAVV 196
            +IGK GS+IK+I+  T A V+V++ D   PS+  A   + IV + GE   V KAL AV 
Sbjct: 163 IVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGETESVKKALFAVS 222

Query: 197 GHLRK 201
             + K
Sbjct: 223 AIMYK 227



 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 83/160 (51%), Gaps = 8/160 (5%)

Query: 42  RIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVL-VSGKEEPEAPLSP 100
           ++I    K+G +IG+ G  IK   + + + I V D+     D  V+ V+  E P+   S 
Sbjct: 320 KVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSM 379

Query: 101 AMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAV 160
           A++AV+ + ++++   E +         ++LLV+S     +IGK GS+I  I++ T A +
Sbjct: 380 AVEAVLLLQEKINDEDEDKV-------KMQLLVSSKVIGCIIGKSGSIISEIRKRTKADI 432

Query: 161 RVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLR 200
            +  G+  P  A  ++ +VE+ GE   V  AL  +V  LR
Sbjct: 433 HISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLR 472


>AT5G53060.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:21515355-21518197 FORWARD LENGTH=652
          Length = 652

 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 149/342 (43%), Gaps = 17/342 (4%)

Query: 35  WPGHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEP 94
           +    V++I+ P  K+  ++G    +I     E    +RV D   G+ ++I+ +S +E P
Sbjct: 321 YSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAP 380

Query: 95  EAPLSPAMDAVIRIFKRVSGLAEIEAAPGA-TFCSVRLLVASTQAINLIGKQGSLIKSIQ 153
           + P  PA +A++ I  ++     I+  P      + RLLV S  +I L GK GS +  I 
Sbjct: 381 DDPFFPAQEALLHIQTQI-----IDLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEIS 434

Query: 154 ESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVLPLFE 213
             TG +V++L  +E+P  A+ ++ ++++ GE   +  A EA+V  L   L  H    L +
Sbjct: 435 RLTGTSVQILAREEIPRCASINDVVIQITGE---IRAAREALV-ELTLLLRSHMFKELSQ 490

Query: 214 KPG-NATISQDRQTDAWADKPSLHSASQTSIVADIPLSNKRDSFYADREXXXXXXXXXXX 272
           K    A+ S     +  A    + S++ T    + P S+  +                  
Sbjct: 491 KETPPASTSTTGPLEGVAGVMEVASSNNTIQSREGPTSSNLN-LQQVSTILPQFKEGFGS 549

Query: 273 XXLYGQDXXXXXXXXXXXXXXTPPIVTTVIQTMQIPLSYAEDIIGMQGSNIDYIRRTSGA 332
               G+                P +  + ++ + +P +    ++    + +  I   SGA
Sbjct: 550 VAKAGESEHREEVPVTTSRMAVPLVTRSTLEVV-LPEAVVPKLVTKSRNKLAQISEWSGA 608

Query: 333 ILTVQESRVPDEI--IVEIKGTSSQVQIAQQLIQDVITHHQE 372
            +T+ E R P+E   I+ I GT  Q + AQ L+Q  I   QE
Sbjct: 609 SVTIVEDR-PEETQNIIRISGTPEQAERAQSLLQGFILSIQE 649



 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 84/196 (42%), Gaps = 27/196 (13%)

Query: 30  KRWPGWPGHCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLGTPDRIVLVS 89
           K  P       YRI+    K G +IG+ G +IK   + T A I V +   G  +RI+ +S
Sbjct: 59  KSHPETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEIS 118

Query: 90  G--KEEPEA---PLSPAMDAVIRIFKRVSGLAEIEAAPG------------------ATF 126
              + +P+      SPA +A+  +  R+    E EA  G                     
Sbjct: 119 DNRRRDPDGRMPSFSPAQEALFSVHDRI---LESEAQFGYGGPPPEEEEDYGGVRPGGGR 175

Query: 127 CSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGD-ELPSYAAADERIVEVQGEP 185
              RL+V+      L+GK G +I+ ++  T   +R+L  +  LP   +  E IV++ GE 
Sbjct: 176 VVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGEL 235

Query: 186 LKVLKALEAVVGHLRK 201
             V  AL  V   LR+
Sbjct: 236 NAVKNALAIVSSRLRE 251


>AT2G22600.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr2:9596617-9599050 FORWARD LENGTH=632
          Length = 632

 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 66/223 (29%), Positives = 110/223 (49%), Gaps = 23/223 (10%)

Query: 40  VYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPLG-TPDRIVLVSGKEEPEAPL 98
           V++II   +  G IIG++G +I+    ET A I V  APL  + +R+V VS +E  E+  
Sbjct: 278 VFKIIFTSVVAGGIIGKQGTIIRALQNETGASISV-GAPLKVSGERVVTVSARENLESRY 336

Query: 99  SPAMDAVIRIFKRVSGLAEIEAAPG-------ATFCSVRLLVAS--TQAINLIGKQGSLI 149
           S A +A+  +F R     EI+   G             +LLV S    + N  G + ++I
Sbjct: 337 SHAQNALALVFARS---VEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNREAII 393

Query: 150 KSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLKVLKALEAVVGHLRKFLVDHTVL 209
                +TGA V +  G+++  + + +E ++E++GE   V KAL  V   LR+ L+   VL
Sbjct: 394 -----ATGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKKVL 448

Query: 210 -PLFEKPGNATISQDRQTDAWADKPSLHSASQT---SIVADIP 248
             +  +  N   S   ++  +  +PS   AS+    S+ A +P
Sbjct: 449 GEMRARVSNPYESAGGRSQIYNLQPSQQDASRGDSLSVSAAVP 491


>AT5G09560.1 | Symbols:  | RNA-binding KH domain-containing protein
           | chr5:2967170-2969655 FORWARD LENGTH=612
          Length = 612

 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/151 (25%), Positives = 80/151 (52%), Gaps = 2/151 (1%)

Query: 60  LIKKTCEETRARIRVLDAPLGTPDRIVLVSGKEEPEAPLSPAMDAVIRIFKRV--SGLAE 117
           ++ KT   T A I V D      +R+V ++  E+ +   S +  A++ +F  +  +  A+
Sbjct: 325 VVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDITSESQRALVLVFSNMYENATAK 384

Query: 118 IEAAPGATFCSVRLLVASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADER 177
           +  +   +  + RL+V S Q   L+G++G +  +IQ+ TGA + VL  ++ P   + + +
Sbjct: 385 VLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQ 444

Query: 178 IVEVQGEPLKVLKALEAVVGHLRKFLVDHTV 208
           +V++ GE   V +A+  V   LR+ L++ + 
Sbjct: 445 VVQISGEFPNVREAINQVTSMLREDLINQSF 475



 Score = 51.6 bits (122), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 31/188 (16%)

Query: 38  HCVYRIIVPVLKVGSIIGRKGELIKKTCEETRARIRVLDAPL-GTPDRIVLVSGK----- 91
           +  +RI+  V + G +IG+ G ++KK  + T + I V   PL  +P RI+ + G      
Sbjct: 29  YVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSVS 88

Query: 92  ------------------EEPEAPLSPAMDAVIRIFKRVSGLAEIEAAPGATFCSVRLLV 133
                             +E E  +S A  A+IR+F+    L   +       C+  LL+
Sbjct: 89  RVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFE---ALNFGDCTSSTVSCN--LLM 143

Query: 134 ASTQAINLIGKQGSLIKSIQESTGAAVRVLTGDELPSYAAADERIVEVQGEPLK-VLKAL 192
             +  + +IGK G L++ I E TG  V++ + D L       + +++++G  L  V+KAL
Sbjct: 144 EGSHVVTVIGKNGELMQRILEETGCNVQLRSHD-LSICTNPGDVVLKIEGNRLSAVMKAL 202

Query: 193 EAVVGHLR 200
            ++   L+
Sbjct: 203 VSISSRLQ 210