Miyakogusa Predicted Gene

Lj4g3v2137100.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2137100.1 Non Chatacterized Hit- tr|K3WGX2|K3WGX2_PYTUL
Uncharacterized protein OS=Pythium ultimum GN=PYU1_G00,33.33,1e-17,no
description,Zinc finger, RING/FYVE/PHD-type; no
description,Homeodomain-like; FYVE/PHD zinc finge,CUFF.50317.1
         (687 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G29940.1 | Symbols: PRHA | pathogenesis related homeodomain p...   278   7e-75
AT4G29940.2 | Symbols: PRHA | pathogenesis related homeodomain p...   278   1e-74
AT3G19510.1 | Symbols: HAT3.1 | Homeodomain-like protein with RI...   174   3e-43

>AT4G29940.1 | Symbols: PRHA | pathogenesis related homeodomain
           protein  A | chr4:14648346-14652710 REVERSE LENGTH=796
          Length = 796

 Score =  278 bits (712), Expect = 7e-75,   Method: Compositional matrix adjust.
 Identities = 125/196 (63%), Positives = 147/196 (75%), Gaps = 4/196 (2%)

Query: 124 NNVDVDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILK 183
           N V+VD++ RLQRRTRYLLIKMK++QNLIDAY+ EGWKGQSREKIRP+KEL+RARK+IL 
Sbjct: 95  NKVEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILN 154

Query: 184 CKLGIRDAIHQ----XXXXXXXXXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTC 239
           CKLG+RDAI Q                      H+HI CA+C  RE  PDN IILCDGTC
Sbjct: 155 CKLGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTC 214

Query: 240 NRAFHQKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKE 299
           NRAFHQKC DPPL++E IP GDQGW CKFC CK+EI+  MNA +GT F + S+WQD+F E
Sbjct: 215 NRAFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNE 274

Query: 300 EASLPDGDVASLNPEA 315
           EASLP G  A++N EA
Sbjct: 275 EASLPIGSEATVNNEA 290



 Score =  138 bits (347), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 99/154 (64%), Gaps = 25/154 (16%)

Query: 392 CGRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWG---------ECDAVDTLMTLHESE 442
           CG RQR+ VDY +LY EMFGKDA+  EQ SEDEDWG         E DA  TL+T+ ES 
Sbjct: 369 CGPRQRRTVDYTQLYYEMFGKDAVLQEQGSEDEDWGPNDRRKRKRESDAGSTLVTMCESS 428

Query: 443 NKNPN----------NGHNSKTRGGSLGVNIRRPNFRIPHNAVERLRQVFAENELPPRSI 492
            K+ +          +  + + +GG      RR  FR+P NAVE+LRQVFAE ELP +++
Sbjct: 429 KKDQDVVETLEQSERDSVSVENKGG------RRRMFRLPRNAVEKLRQVFAETELPSKAV 482

Query: 493 RESLSKELGLEIQKVSKWFKNARYTALKTRKLQA 526
           R+ L+KEL L+ +KV+KWFKN RY AL+ RK ++
Sbjct: 483 RDRLAKELSLDPEKVNKWFKNTRYMALRNRKTES 516


>AT4G29940.2 | Symbols: PRHA | pathogenesis related homeodomain
           protein  A | chr4:14648346-14652710 REVERSE LENGTH=769
          Length = 769

 Score =  278 bits (711), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 125/196 (63%), Positives = 147/196 (75%), Gaps = 4/196 (2%)

Query: 124 NNVDVDEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILK 183
           N V+VD++ RLQRRTRYLLIKMK++QNLIDAY+ EGWKGQSREKIRP+KEL+RARK+IL 
Sbjct: 95  NKVEVDDSLRLQRRTRYLLIKMKMQQNLIDAYATEGWKGQSREKIRPDKELERARKEILN 154

Query: 184 CKLGIRDAIHQ----XXXXXXXXXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTC 239
           CKLG+RDAI Q                      H+HI CA+C  RE  PDN IILCDGTC
Sbjct: 155 CKLGLRDAIRQLDLLSSVGSMEEKVIASDGSIHHDHIFCAECNSREAFPDNDIILCDGTC 214

Query: 240 NRAFHQKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKE 299
           NRAFHQKC DPPL++E IP GDQGW CKFC CK+EI+  MNA +GT F + S+WQD+F E
Sbjct: 215 NRAFHQKCLDPPLETESIPPGDQGWFCKFCDCKIEIIDTMNAQIGTHFPVDSNWQDIFNE 274

Query: 300 EASLPDGDVASLNPEA 315
           EASLP G  A++N EA
Sbjct: 275 EASLPIGSEATVNNEA 290



 Score =  137 bits (346), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 75/154 (48%), Positives = 99/154 (64%), Gaps = 25/154 (16%)

Query: 392 CGRRQRKAVDYKKLYDEMFGKDALACEQVSEDEDWG---------ECDAVDTLMTLHESE 442
           CG RQR+ VDY +LY EMFGKDA+  EQ SEDEDWG         E DA  TL+T+ ES 
Sbjct: 369 CGPRQRRTVDYTQLYYEMFGKDAVLQEQGSEDEDWGPNDRRKRKRESDAGSTLVTMCESS 428

Query: 443 NKNPN----------NGHNSKTRGGSLGVNIRRPNFRIPHNAVERLRQVFAENELPPRSI 492
            K+ +          +  + + +GG      RR  FR+P NAVE+LRQVFAE ELP +++
Sbjct: 429 KKDQDVVETLEQSERDSVSVENKGG------RRRMFRLPRNAVEKLRQVFAETELPSKAV 482

Query: 493 RESLSKELGLEIQKVSKWFKNARYTALKTRKLQA 526
           R+ L+KEL L+ +KV+KWFKN RY AL+ RK ++
Sbjct: 483 RDRLAKELSLDPEKVNKWFKNTRYMALRNRKTES 516


>AT3G19510.1 | Symbols: HAT3.1 | Homeodomain-like protein with
           RING/FYVE/PHD-type zinc finger domain |
           chr3:6763205-6766049 REVERSE LENGTH=723
          Length = 723

 Score =  174 bits (440), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 85/178 (47%), Positives = 108/178 (60%), Gaps = 4/178 (2%)

Query: 129 DEASRLQRRTRYLLIKMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRARKQILKCKLGI 188
           DE +R++++ RY L ++  EQ+LIDAYS EGWKG S EKIRPEKEL+RA K+IL+ KL I
Sbjct: 175 DEYTRIKKKLRYFLNRINYEQSLIDAYSLEGWKGSSLEKIRPEKELERATKEILRRKLKI 234

Query: 189 RDAIHQX----XXXXXXXXXXXXXXXXXHEHILCAKCKLREDLPDNGIILCDGTCNRAFH 244
           RD                           E I CAKC  ++   DN IILCDG C+R FH
Sbjct: 235 RDLFQHLDTLCAEGSLPESLFDTDGEISSEDIFCAKCGSKDLSVDNDIILCDGFCDRGFH 294

Query: 245 QKCHDPPLDSEDIPEGDQGWLCKFCACKMEILGAMNAHLGTRFSLHSDWQDVFKEEAS 302
           Q C +PPL  EDIP  D+GWLC  C CK + L  +N  LGT+FS+   W+ +F E A+
Sbjct: 295 QYCLEPPLRKEDIPPDDEGWLCPGCDCKDDSLDLLNDSLGTKFSVSDSWEKIFPEAAA 352