Miyakogusa Predicted Gene
- Lj4g3v2137050.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2137050.1 tr|G7LHB8|G7LHB8_MEDTR Pentatricopeptide
repeat-containing protein OS=Medicago truncatula
GN=MTR_8g0,24,4e-18,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptide repeat
domain,P,CUFF.50310.1
(544 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 355 4e-98
AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 354 7e-98
AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR) su... 353 2e-97
AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 352 4e-97
AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 349 2e-96
AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 347 9e-96
AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR) sup... 347 9e-96
AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 345 4e-95
AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 342 3e-94
AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 342 4e-94
AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide re... 338 6e-93
AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 337 9e-93
AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 337 2e-92
AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat (TPR)-... 337 2e-92
AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-li... 334 1e-91
AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 329 3e-90
AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 ... 328 5e-90
AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 328 8e-90
AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 324 9e-89
AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 322 3e-88
AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 321 7e-88
AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 321 7e-88
AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 318 5e-87
AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 318 8e-87
AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 317 1e-86
AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat (TPR)-... 317 2e-86
AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 315 7e-86
AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 313 1e-85
AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 313 2e-85
AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR) ... 312 4e-85
AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 4e-85
AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 312 4e-85
AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 311 7e-85
AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 310 1e-84
AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-li... 309 3e-84
AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 309 4e-84
AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 309 4e-84
AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 4e-84
AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 308 5e-84
AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-li... 308 7e-84
AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 307 1e-83
AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 306 3e-83
AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 305 4e-83
AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 305 5e-83
AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 302 4e-82
AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 302 4e-82
AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 300 2e-81
AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly, ... 299 3e-81
AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of... 299 4e-81
AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 298 9e-81
AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 296 2e-80
AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 295 4e-80
AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 294 1e-79
AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 291 7e-79
AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 291 9e-79
AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (P... 291 1e-78
AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 290 2e-78
AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 290 2e-78
AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 8e-78
AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 288 1e-77
AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 286 3e-77
AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 285 5e-77
AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 285 5e-77
AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-95110... 285 7e-77
AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 284 1e-76
AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 2e-76
AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 283 3e-76
AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-li... 282 5e-76
AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 9e-76
AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 281 1e-75
AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 280 1e-75
AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 279 4e-75
AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 5e-75
AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 278 8e-75
AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 278 1e-74
AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 277 1e-74
AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 276 2e-74
AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 276 2e-74
AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 276 4e-74
AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 275 5e-74
AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 275 7e-74
AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR) su... 274 1e-73
AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 ... 273 2e-73
AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 273 3e-73
AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-li... 271 9e-73
AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 270 2e-72
AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 269 4e-72
AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-lik... 268 7e-72
AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 268 1e-71
AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR) su... 267 1e-71
AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 ... 266 2e-71
AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 266 2e-71
AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 265 4e-71
AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 265 8e-71
AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 264 1e-70
AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR) su... 263 2e-70
AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-li... 263 2e-70
AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 5e-70
AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 262 6e-70
AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 259 2e-69
AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 259 3e-69
AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 258 9e-69
AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 256 3e-68
AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 254 1e-67
AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 254 1e-67
AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 253 3e-67
AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 253 3e-67
AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 252 4e-67
AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 251 7e-67
AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 251 9e-67
AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 249 2e-66
AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 6e-66
AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 248 7e-66
AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-li... 248 8e-66
AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 248 8e-66
AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 248 9e-66
AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 245 5e-65
AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 245 7e-65
AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 244 9e-65
AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 9e-65
AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 244 9e-65
AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 ... 244 1e-64
AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 244 2e-64
AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 ... 243 3e-64
AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 242 4e-64
AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 242 5e-64
AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 242 5e-64
AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 242 6e-64
AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopepti... 241 8e-64
AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 241 1e-63
AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 240 2e-63
AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 239 5e-63
AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 238 7e-63
AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat ... 237 1e-62
AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 237 1e-62
AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 237 2e-62
AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 2e-62
AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 236 2e-62
AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 236 3e-62
AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 235 5e-62
AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 233 2e-61
AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 233 2e-61
AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 233 3e-61
AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 232 4e-61
AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 232 6e-61
AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 7e-61
AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 | c... 231 8e-61
AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR) su... 231 9e-61
AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 231 1e-60
AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 231 1e-60
AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 230 2e-60
AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 229 4e-60
AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 229 5e-60
AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 228 8e-60
AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR) sup... 226 2e-59
AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 226 3e-59
AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 226 4e-59
AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 226 4e-59
AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 225 7e-59
AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 224 1e-58
AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 223 2e-58
AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 8e-58
AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 221 9e-58
AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 220 2e-57
AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 220 2e-57
AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 218 7e-57
AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 216 3e-56
AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 215 5e-56
AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 215 7e-56
AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 214 1e-55
AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 213 2e-55
AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 212 7e-55
AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 211 8e-55
AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 209 3e-54
AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 208 8e-54
AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 9e-53
AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 204 1e-52
AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH) D... 204 1e-52
AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 204 2e-52
AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 200 2e-51
AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 198 7e-51
AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 197 1e-50
AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 197 2e-50
AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 196 4e-50
AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 189 4e-48
AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 ... 188 7e-48
AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 185 6e-47
AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 174 2e-43
AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 150 3e-36
AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 127 2e-29
AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 120 3e-27
AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 115 1e-25
AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 6e-25
AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 7e-25
AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 112 8e-25
AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR) su... 110 3e-24
AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 110 3e-24
AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 107 2e-23
AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 102 1e-21
AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 2e-21
AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 100 3e-21
AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 99 6e-21
AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 99 7e-21
AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 98 2e-20
AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 2e-20
AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 97 3e-20
AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 97 4e-20
AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 97 4e-20
AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 95 1e-19
AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 | chr2:1338720... 94 2e-19
AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 94 3e-19
AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 4e-19
AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 93 5e-19
AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 8e-19
AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 | chr1:232... 92 8e-19
AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 92 1e-18
AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 91 2e-18
AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 90 4e-18
AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 90 5e-18
AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 6e-18
AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 89 7e-18
AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 89 8e-18
AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 89 1e-17
AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-contain... 89 1e-17
AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 88 1e-17
AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 88 2e-17
AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 87 3e-17
AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 86 9e-17
AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR) ... 86 1e-16
AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 85 1e-16
AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 85 2e-16
AT2G39230.1 | Symbols: LOJ | LATERAL ORGAN JUNCTION | chr2:16381... 84 2e-16
AT1G62914.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 84 3e-16
AT5G65560.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 82 8e-16
AT4G28010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 82 1e-15
AT3G16010.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 82 1e-15
AT2G35130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT2G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 81 2e-15
AT5G16640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT2G15630.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 81 2e-15
AT1G19290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 80 3e-15
AT2G41720.2 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 80 3e-15
AT1G13040.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 80 4e-15
AT4G31850.1 | Symbols: PGR3 | proton gradient regulation 3 | chr... 80 5e-15
AT3G53170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 80 5e-15
AT2G41720.1 | Symbols: EMB2654 | Tetratricopeptide repeat (TPR)-... 79 6e-15
AT1G62720.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 79 7e-15
AT3G04760.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 78 2e-14
AT4G30825.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 77 2e-14
AT5G21222.1 | Symbols: | protein kinase family protein | chr5:7... 77 4e-14
AT3G48810.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 77 4e-14
AT3G06920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 75 9e-14
AT5G39710.1 | Symbols: EMB2745 | Tetratricopeptide repeat (TPR)-... 75 9e-14
AT1G09820.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 75 1e-13
AT2G16880.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 75 1e-13
AT5G01110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 74 2e-13
AT5G42310.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 2e-13
AT5G46580.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 74 3e-13
AT1G09900.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 74 3e-13
AT1G12700.1 | Symbols: | ATP binding;nucleic acid binding;helic... 73 4e-13
AT1G51965.1 | Symbols: ABO5 | ABA Overly-Sensitive 5 | chr1:1931... 73 4e-13
AT5G61400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 7e-13
AT5G62370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G13630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT2G01740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G13630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 7e-13
AT1G62680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 8e-13
AT2G32630.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 72 9e-13
AT1G30290.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT1G64580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT1G06580.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 72 1e-12
AT2G02150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 72 1e-12
AT5G48730.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT1G03560.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 71 2e-12
AT5G28370.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT3G61520.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 71 2e-12
AT5G28460.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 70 3e-12
AT3G49240.1 | Symbols: emb1796 | Pentatricopeptide repeat (PPR) ... 70 5e-12
AT1G09680.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G06000.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT2G06000.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 6e-12
AT1G79540.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT1G74750.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 9e-12
AT3G16710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 69 1e-11
AT3G59040.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT3G59040.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 68 1e-11
AT5G46680.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 68 2e-11
AT1G18900.3 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 68 2e-11
AT1G74850.1 | Symbols: PTAC2 | plastid transcriptionally active ... 68 2e-11
AT1G18900.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G18900.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 2e-11
AT1G20300.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 67 3e-11
AT3G16890.1 | Symbols: PPR40 | pentatricopeptide (PPR) domain pr... 66 5e-11
AT1G06710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 66 6e-11
AT1G11710.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 66 6e-11
AT1G74900.1 | Symbols: OTP43 | Pentatricopeptide repeat (PPR) su... 66 7e-11
AT1G22960.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 65 1e-10
AT1G55890.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT4G20090.1 | Symbols: EMB1025 | Pentatricopeptide repeat (PPR) ... 65 1e-10
AT5G18950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 65 1e-10
AT1G02060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 64 2e-10
AT3G29290.1 | Symbols: emb2076 | Pentatricopeptide repeat (PPR) ... 64 3e-10
AT4G16390.1 | Symbols: SVR7 | pentatricopeptide (PPR) repeat-con... 63 4e-10
AT3G49730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 63 4e-10
AT2G17670.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 7e-10
AT5G65820.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT3G22670.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 8e-10
AT1G16830.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT2G17670.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT1G52620.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 62 1e-09
AT5G25630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 62 1e-09
AT3G04130.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT3G04130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 61 2e-09
AT5G16420.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 3e-09
AT2G37230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 3e-09
AT4G11690.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 60 4e-09
AT1G63230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 60 4e-09
AT4G01570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 7e-09
AT4G39620.2 | Symbols: EMB2453 | Tetratricopeptide repeat (TPR)-... 59 8e-09
AT3G07290.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 9e-09
AT5G25630.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 59 9e-09
AT5G40400.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 59 1e-08
AT4G39620.1 | Symbols: EMB2453, ATPPR5 | Tetratricopeptide repea... 59 1e-08
AT5G38730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 1e-08
AT1G10910.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT3G13150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 58 2e-08
AT1G77340.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 58 2e-08
AT5G50280.1 | Symbols: EMB1006 | Pentatricopeptide repeat (PPR) ... 57 4e-08
AT1G63630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 4e-08
AT5G15010.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 57 5e-08
AT1G52640.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 57 5e-08
AT4G34830.1 | Symbols: MRL1 | Pentatricopeptide repeat (PPR) sup... 56 6e-08
AT5G10690.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 56 7e-08
AT5G27270.1 | Symbols: EMB976 | Tetratricopeptide repeat (TPR)-l... 56 8e-08
AT4G26800.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 56 8e-08
AT1G77405.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 55 9e-08
AT4G19890.1 | Symbols: | Pentatricopeptide repeat (PPR-like) su... 55 2e-07
AT1G71060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 55 2e-07
AT4G36680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 2e-07
AT2G19280.2 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT2G19280.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 2e-07
AT3G13160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 54 3e-07
AT4G01400.3 | Symbols: | FUNCTIONS IN: molecular_function unkno... 54 4e-07
AT5G57250.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 54 4e-07
AT1G19520.1 | Symbols: NFD5 | pentatricopeptide (PPR) repeat-con... 53 5e-07
AT3G60050.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 53 6e-07
AT4G26680.2 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT4G26680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 53 7e-07
AT5G24830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT2G17140.1 | Symbols: | Pentatricopeptide repeat (PPR) superfa... 52 1e-06
AT2G36240.1 | Symbols: | pentatricopeptide (PPR) repeat-contain... 52 1e-06
AT3G61360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 52 1e-06
AT1G77360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like su... 51 3e-06
>AT2G13600.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:5671493-5673586 FORWARD
LENGTH=697
Length = 697
Score = 355 bits (911), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 198/615 (32%), Positives = 322/615 (52%), Gaps = 78/615 (12%)
Query: 7 GTLLQRCSKTMTFGL-----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
LL C K+ + HA+V+K G + +F+ N+L++ Y KCG + R+VFD M
Sbjct: 23 AKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGRQVFDKMP 82
Query: 62 ERNTVSWSAMISG----------------------------------YDQCGEHWMALHL 87
+RN +W+++++G +D+C E +
Sbjct: 83 QRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSGFAQHDRCEEALCYFAM 142
Query: 88 FSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ 147
+ + NE+ FAS LSAC+ L + +G Q+H L +S + S ++ ++L+ MY KCG
Sbjct: 143 MHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSDVYIGSALVDMYSKCGN 202
Query: 148 CSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGF 207
+DA V+ N VS+N+LI+ F +N + +VF++ML+ PD + ++
Sbjct: 203 VNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVFQMMLESRVEPDEVTLASVISA 262
Query: 208 STNLDDFRTGMSLHCQAVK-LALDCTPLIGNVIMSMYAQFNFIEEVVRVF---------- 256
+L + G +H + VK L ++ N + MYA+ + I+E +F
Sbjct: 263 CASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIA 322
Query: 257 -----------------RLI----QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
RL+ +++V+SWN LI ++ + ++ F + E S
Sbjct: 323 ETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRE-S 381
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIH------AFLFRTRQYWDVGVHNALVNMYAKCG 349
+ P ++FA+IL +C A G Q H F F++ + D+ V N+L++MY KCG
Sbjct: 382 VCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCG 441
Query: 350 SIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
+ + VF KM R+ +SWN MI F +G G A+E+F +M G KPD +T G+L
Sbjct: 442 CVEEGYLVFRKMMERDCVSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLS 501
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDP 469
AC H+G V +G YF+SM +G+AP H++C++D+LGRAG L E + I + D
Sbjct: 502 ACGHAGFVEEGRHYFSSMTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDS 561
Query: 470 VVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKML 529
V+ GSLL+AC+VH N+ +G+ +A+ LLEV P + PYVLLSN+YA G W +V + RK +
Sbjct: 562 VIWGSLLAACKVHRNITLGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSM 621
Query: 530 KGSGLRKEPGYAWLK 544
+ G+ K+PG +W+K
Sbjct: 622 RKEGVTKQPGCSWIK 636
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 201/440 (45%), Gaps = 70/440 (15%)
Query: 85 LHLFSQMKVLPNEFVFASTLSAC-ASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYM 143
L L + + + FA L +C S + + + +H ++SG+++ F+ N LI Y
Sbjct: 7 LKLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYS 66
Query: 144 KCGQCSDALSVYA----------NSVGT---------------------NSVSYNALISG 172
KCG D V+ NSV T + ++N+++SG
Sbjct: 67 KCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTWNSMVSG 126
Query: 173 FVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCT 232
F ++ E+ F +M +EGFV + +SF +L + L+D G+ +H K
Sbjct: 127 FAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKGVQVHSLIAKSPFLSD 186
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
IG+ ++ MY++ + + RVF + D++V+SWN+LI F ++ F +MM
Sbjct: 187 VYIGSALVDMYSKCGNVNDAQRVFDEMGDRNVVSWNSLITCFEQNGPAVEALDVF-QMML 245
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW-DVGVHNALVNMYAKCGSI 351
E + PD+ T AS++++C ++ G+++H + + + D+ + NA V+MYAKC I
Sbjct: 246 ESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCSRI 305
Query: 352 -----------------------GY--------AHKVFSKMSYRNLISWNTMIAAFGNHG 380
GY A +F+KM+ RN++SWN +IA + +G
Sbjct: 306 KEARFIFDSMPIRNVIAETSMISGYAMAASTKAARLMFTKMAERNVVSWNALIAGYTQNG 365
Query: 381 LGERAIEIFEQMKAEGVKPDSVTFTGLLIACN-----HSGMVRKGDLYFNSMEAAYGIAP 435
E A+ +F +K E V P +F +L AC H GM + + + G
Sbjct: 366 ENEEALSLFCLLKRESVCPTHYSFANILKACADLAELHLGMQAHVHVLKHGFKFQSGEED 425
Query: 436 NIGHFSCLIDMLGRAGRLSE 455
+I + LIDM + G + E
Sbjct: 426 DIFVGNSLIDMYVKCGCVEE 445
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 108/248 (43%), Gaps = 37/248 (14%)
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHA-SFLHGKQIHAFLFRTRQYWDVGVHNA 340
KSFL ++ + S D FA +L SC S ++ + +HA + ++ ++ + N
Sbjct: 4 KSFL---KLAADLSSFTDSSPFAKLLDSCIKSKLSAIYVRYVHASVIKSGFSNEIFIQNR 60
Query: 341 LVNMYAKCGSIGYAHKVFSKMSYRNL-------------------------------ISW 369
L++ Y+KCGS+ +VF KM RN+ +W
Sbjct: 61 LIDAYSKCGSLEDGRQVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMPERDQCTW 120
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
N+M++ F H E A+ F M EG + +F +L AC+ + KG + +S+ A
Sbjct: 121 NSMVSGFAQHDRCEEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG-VQVHSLIA 179
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
++ S L+DM + G +++ + ++ N V SL++ +G
Sbjct: 180 KSPFLSDVYIGSALVDMYSKCGNVNDAQRVFDEMGDRN-VVSWNSLITCFEQNGPAVEAL 238
Query: 490 RLAKLLLE 497
+ +++LE
Sbjct: 239 DVFQMMLE 246
>AT3G15130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:5097153-5099222 REVERSE
LENGTH=689
Length = 689
Score = 354 bits (909), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/532 (35%), Positives = 308/532 (57%), Gaps = 10/532 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H +LK G ++ SN L++MY KC ++A KVFD M ERN VSWSA++SG+ G+
Sbjct: 28 VHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGD 87
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+L LFS+M + PNEF F++ L AC L AL +G QIHG L+ G+ + V NS
Sbjct: 88 LKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNS 147
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV-- 195
L+ MY KCG+ ++A V+ V + +S+NA+I+GFV K + F +M QE +
Sbjct: 148 LVDMYSKCGRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMM-QEANIKE 206
Query: 196 -PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC--TPLIGNVIMSMYAQFNFIEEV 252
PD F+ LL ++ G +H V+ C + I ++ +Y + ++
Sbjct: 207 RPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSA 266
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
+ F I++K +ISW++LI ++ + ++ FK + E + + D F +SI+
Sbjct: 267 RKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL-QELNSQIDSFALSSIIGVFAD 325
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTM 372
A GKQ+ A + + V N++V+MY KCG + A K F++M +++ISW +
Sbjct: 326 FALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVV 385
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG 432
I +G HGLG++++ IF +M ++PD V + +L AC+HSGM+++G+ F+ + +G
Sbjct: 386 ITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHG 445
Query: 433 IAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLA 492
I P + H++C++D+LGRAGRL E + I+ + + +LLS CRVHG++ +G+ +
Sbjct: 446 IKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVG 505
Query: 493 KLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
K+LL + + YV++SNLY G WNE +AR++ GL+KE G +W++
Sbjct: 506 KILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVE 557
Score = 165 bits (417), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 206/419 (49%), Gaps = 13/419 (3%)
Query: 93 VLPNEFV-FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDA 151
++PN+ S L C QG Q+H L+SG SN LI MY KC + A
Sbjct: 1 MIPNQRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMA 60
Query: 152 LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
V+ + N VS++AL+SG V N + + +F M ++G P+ F+F L L
Sbjct: 61 YKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 212 DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
+ G+ +H +K+ + +GN ++ MY++ I E +VFR I D+ +ISWN +I
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSI--RPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
F H K+ F MM E +I RPD+FT S+L +C+ GKQIH FL R+
Sbjct: 181 AGFVHAGYGSKALDTFG-MMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS 239
Query: 330 RQYW--DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIE 387
+ + +LV++Y KCG + A K F ++ + +ISW+++I + G A+
Sbjct: 240 GFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMG 299
Query: 388 IFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDM 446
+F++++ + DS + ++ ++R+G + +++ G+ ++ + ++DM
Sbjct: 300 LFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSV--LNSVVDM 357
Query: 447 LGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSP 505
+ G + E E+ + L D + +++ HG +G++ ++ E+ P
Sbjct: 358 YLKCGLVDEAEKCFAEM-QLKDVISWTVVITGYGKHG---LGKKSVRIFYEMLRHNIEP 412
>AT1G11290.1 | Symbols: CRR22 | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:3791454-3793883 REVERSE
LENGTH=809
Length = 809
Score = 353 bits (905), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/522 (35%), Positives = 298/522 (57%), Gaps = 4/522 (0%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H ++K G +F L NMY KC +V ARKVFD M ER+ VSW+ +++GY Q G
Sbjct: 157 IHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGM 216
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
MAL + M + P+ S L A ++LR + G++IHG ++RSG+ S+ +S +
Sbjct: 217 ARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTA 276
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY KCG A ++ + N VS+N++I +V+N P++ +F+ ML EG P
Sbjct: 277 LVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPT 336
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
S +G L +L D G +H +V+L LD + N ++SMY + ++ +F
Sbjct: 337 DVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFG 396
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+Q + ++SWN +I F+ + +F +M + +++PD FT+ S++ + +
Sbjct: 397 KLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR-TVKPDTFTYVSVITAIAELSITH 455
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
H K IH + R+ +V V ALV+MYAKCG+I A +F MS R++ +WN MI +G
Sbjct: 456 HAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMIDGYG 515
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
HG G+ A+E+FE+M+ +KP+ VTF ++ AC+HSG+V G F M+ Y I ++
Sbjct: 516 THGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIELSM 575
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
H+ ++D+LGRAGRL+E ++I + V G++L AC++H N+ E+ A+ L E
Sbjct: 576 DHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAERLFE 635
Query: 498 VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+ P +VLL+N+Y + MW +V R + GLRK PG
Sbjct: 636 LNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPG 677
Score = 196 bits (498), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 120/449 (26%), Positives = 218/449 (48%), Gaps = 6/449 (1%)
Query: 9 LLQRCSKTMTF-GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVS 67
LL+RCS + V K GL F +L++++ + G V A +VF+ + + V
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 68 WSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSL 124
+ M+ G+ + + AL F +M+ V P + F L C L G++IHGL +
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 125 RSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
+SG++ F L MY KC Q ++A V+ + VS+N +++G+ +N E
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYA 244
+ K M +E P + V +L + L G +H A++ D I ++ MYA
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 245 QFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFA 304
+ +E ++F + +++V+SWN++I+A+ ++ ++ L F++M++E ++P D +
Sbjct: 283 KCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDE-GVKPTDVSVM 341
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR 364
L +C G+ IH +V V N+L++MY KC + A +F K+ R
Sbjct: 342 GALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAASMFGKLQSR 401
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYF 424
L+SWN MI F +G A+ F QM++ VKPD+ T+ ++ A + +
Sbjct: 402 TLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELSITHHAK-WI 460
Query: 425 NSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
+ + + N+ + L+DM + G +
Sbjct: 461 HGVVMRSCLDKNVFVTTALVDMYAKCGAI 489
>AT3G02010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:337965-340442 FORWARD
LENGTH=825
Length = 825
Score = 352 bits (903), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 187/550 (34%), Positives = 310/550 (56%), Gaps = 11/550 (2%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVF--VSNQLLNMYVKCGRVVLARKVFD 58
T TLL C+ + +HA +K+G ++ F VSN LL Y + R+ LA +F+
Sbjct: 149 TFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFE 208
Query: 59 GMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQ 115
+ E+++V+++ +I+GY++ G + ++HLF +M+ P++F F+ L A L
Sbjct: 209 EIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
GQQ+H LS+ +G++ + V N ++ Y K + + ++ + VSYN +IS + +
Sbjct: 269 GQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQ 328
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ E F+ M GF F F +L + NL + G LHCQA+ D +
Sbjct: 329 ADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHV 388
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
GN ++ MYA+ EE +F+ + + +SW LI+ + G F +M +
Sbjct: 389 GNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGS-N 447
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
+R D TFA++L + AS L GKQ+HAF+ R+ +V + LV+MYAKCGSI A
Sbjct: 448 LRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAV 507
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
+VF +M RN +SWN +I+A ++G GE AI F +M G++PDSV+ G+L AC+H G
Sbjct: 508 QVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSILGVLTACSHCG 567
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
V +G YF +M YGI P H++C++D+LGR GR +E E+ +++ D ++ S+
Sbjct: 568 FVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSV 627
Query: 476 LSACRVHGNMAIGERLAKLLLEVPPV-TTSPYVLLSNLYASDGMWNEVTSARKMLKGSGL 534
L+ACR+H N ++ ER A+ L + + + YV +SN+YA+ G W +V +K ++ G+
Sbjct: 628 LNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAAGEWEKVRDVKKAMRERGI 687
Query: 535 RKEPGYAWLK 544
+K P Y+W++
Sbjct: 688 KKVPAYSWVE 697
Score = 171 bits (434), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 127/474 (26%), Positives = 218/474 (45%), Gaps = 41/474 (8%)
Query: 37 SNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----- 91
+N +++ +VK G V AR +FD M +R V+W+ ++ Y + A LF QM
Sbjct: 82 TNTMISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSS 141
Query: 92 KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF--VSNSLITMYMKCGQCS 149
LP+ F + L C Q+H +++ G+ + F VSN L+ Y + +
Sbjct: 142 CTLPDHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLD 201
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
A ++ +SV++N LI+G+ ++ + +F M Q G P F+F G+L
Sbjct: 202 LACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVV 261
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
L DF G LH +V +GN I+ Y++ + + E +F + + D +S+N
Sbjct: 262 GLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNV 321
Query: 270 LINAFSHFDDQGKSFLFFKEMMNEC-SIRPDDFTFASILASCTWHASFLHGKQIH--AFL 326
+I+++S D S FF+EM +C +F FA++L+ +S G+Q+H A L
Sbjct: 322 VISSYSQADQYEASLHFFREM--QCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALL 379
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAI 386
VG N+LV+MYAKC A +F + R +SW +I+ + GL +
Sbjct: 380 ATADSILHVG--NSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGL 437
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIACN-----------HSGMVRKGDLYFNSMEAAYGIAP 435
++F +M+ ++ D TF +L A H+ ++R G+L
Sbjct: 438 KLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNL------------E 485
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
N+ S L+DM + G + + + + N V +L+SA H + GE
Sbjct: 486 NVFSGSGLVDMYAKCGSIKDAVQVFEEMPDRN-AVSWNALISA---HADNGDGE 535
>AT3G53360.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:19784502-19786808 FORWARD
LENGTH=768
Length = 768
Score = 349 bits (896), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 184/551 (33%), Positives = 307/551 (55%), Gaps = 18/551 (3%)
Query: 7 GTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
G++++ C+ + GL HA V+K+ SH+ N L+ MYV+ ++ A +VF G+
Sbjct: 172 GSIIKACASSSDVGLGKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPM 231
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQMKVL----PNEFVFASTLSACASLRALVQGQQ 118
++ +SWS++I+G+ Q G + AL +M PNE++F S+L AC+SL G Q
Sbjct: 232 KDLISWSSIIAGFSQLGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQ 291
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
IHGL ++S A + SL MY +CG + A V+ ++ S+N +I+G N
Sbjct: 292 IHGLCIKSELAGNAIAGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGY 351
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
++ VF M GF+PD S LL T GM +H +K + N
Sbjct: 352 ADEAVSVFSQMRSSGFIPDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNS 411
Query: 239 IMSMYAQFNFIEEVVRVFRLIQD----KDVISWNTLINAFSHFDDQGKSFLFFKEMM-NE 293
+++MY F ++ F L +D D +SWNT++ A + + FK M+ +E
Sbjct: 412 LLTMYT---FCSDLYCCFNLFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSE 468
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGY 353
C PD T ++L C +S G Q+H + +T + + N L++MYAKCGS+G
Sbjct: 469 C--EPDHITMGNLLRGCVEISSLKLGSQVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQ 526
Query: 354 AHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
A ++F M R+++SW+T+I + G GE A+ +F++MK+ G++P+ VTF G+L AC+H
Sbjct: 527 ARRIFDSMDNRDVVSWSTLIVGYAQSGFGEEALILFKEMKSAGIEPNHVTFVGVLTACSH 586
Query: 414 SGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLG 473
G+V +G + +M+ +GI+P H SC++D+L RAGRL+E E +I++ D VV
Sbjct: 587 VGLVEEGLKLYATMQTEHGISPTKEHCSCVVDLLARAGRLNEAERFIDEMKLEPDVVVWK 646
Query: 474 SLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSG 533
+LLSAC+ GN+ + ++ A+ +L++ P ++ +VLL +++AS G W R +K
Sbjct: 647 TLLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHD 706
Query: 534 LRKEPGYAWLK 544
++K PG +W++
Sbjct: 707 VKKIPGQSWIE 717
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 119/404 (29%), Positives = 204/404 (50%), Gaps = 3/404 (0%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
+ S + AC+S R+L QG++IH L S + ++N +++MY KCG DA V+
Sbjct: 69 TYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFDFM 128
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
N VSY ++I+G+ +N + + ++ MLQE VPD+F+F ++ + D G
Sbjct: 129 PERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGLGK 188
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD 278
LH Q +KL + N +++MY +FN + + RVF I KD+ISW+++I FS
Sbjct: 189 QLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQLG 248
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
+ ++ KEM++ P+++ F S L +C+ +G QIH ++ +
Sbjct: 249 FEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAIAG 308
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
+L +MYA+CG + A +VF ++ + SWN +IA N+G + A+ +F QM++ G
Sbjct: 309 CSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSGFI 368
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEE 458
PD+++ LL A + +G + +S +G ++ + L+ M L
Sbjct: 369 PDAISLRSLLCAQTKPMALSQG-MQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCCFN 427
Query: 459 YINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL--EVPP 500
F + D V ++L+AC H RL KL+L E P
Sbjct: 428 LFEDFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEP 471
Score = 181 bits (458), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 225/464 (48%), Gaps = 15/464 (3%)
Query: 3 LETIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
L T +L+ CS + + +H +L + ++N +L+MY KCG + AR+VFD
Sbjct: 67 LRTYISLICACSSSRSLAQGRKIHDHILNSNCKYDTILNNHILSMYGKCGSLRDAREVFD 126
Query: 59 GMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQ 115
M ERN VS++++I+GY Q G+ A+ L+ +M ++P++F F S + ACAS +
Sbjct: 127 FMPERNLVSYTSVITGYSQNGQGAEAIRLYLKMLQEDLVPDQFAFGSIIKACASSSDVGL 186
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G+Q+H ++ +S N+LI MY++ Q SDA V+ + +S++++I+GF +
Sbjct: 187 GKQLHAQVIKLESSSHLIAQNALIAMYVRFNQMSDASRVFYGIPMKDLISWSSIIAGFSQ 246
Query: 176 NHEPEKGFEVFKLMLQEG-FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
+ K ML G F P+ + F L ++L G +H +K L +
Sbjct: 247 LGFEFEALSHLKEMLSFGVFHPNEYIFGSSLKACSSLLRPDYGSQIHGLCIKSELAGNAI 306
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
G + MYA+ F+ RVF I+ D SWN +I ++ ++ F +M +
Sbjct: 307 AGCSLCDMYARCGFLNSARRVFDQIERPDTASWNVIIAGLANNGYADEAVSVFSQMRSSG 366
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
I PD + S+L + T + G QIH+++ + D+ V N+L+ MY C +
Sbjct: 367 FI-PDAISLRSLLCAQTKPMALSQGMQIHSYIIKWGFLADLTVCNSLLTMYTFCSDLYCC 425
Query: 355 HKVFSKMSYRN---LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
+F +RN +SWNT++ A H + +F+ M +PD +T LL C
Sbjct: 426 FNLFE--DFRNNADSVSWNTILTACLQHEQPVEMLRLFKLMLVSECEPDHITMGNLLRGC 483
Query: 412 NHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
++ G + G+AP + LIDM + G L +
Sbjct: 484 VEISSLKLGS-QVHCYSLKTGLAPEQFIKNGLIDMYAKCGSLGQ 526
>AT5G16860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:5543834-5546386 FORWARD
LENGTH=850
Length = 850
Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 197/583 (33%), Positives = 309/583 (53%), Gaps = 54/583 (9%)
Query: 12 RCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAM 71
RC ++ HA L G S+VFV N L+ MY +C + ARKVFD MS + VSW+++
Sbjct: 144 RCGESA----HALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSI 199
Query: 72 ISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSG 127
I Y + G+ +AL +FS+M P+ + L CASL G+Q+H ++ S
Sbjct: 200 IESYAKLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSE 259
Query: 128 YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGF------------VE 175
FV N L+ MY KCG +A +V++N + VS+NA+++G+ E
Sbjct: 260 MIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFE 319
Query: 176 NHEPEK--------------------GFE---VFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
+ EK G+E V + ML G P+ + + +L ++
Sbjct: 320 KMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVG 379
Query: 213 DFRTGMSLHCQAVKLALDCTP-------LIGNVIMSMYAQFNFIEEVVRVFRLI--QDKD 263
G +HC A+K +D ++ N ++ MYA+ ++ +F + +++D
Sbjct: 380 ALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERD 439
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNE-CSIRPDDFTFASILASCTWHASFLHGKQI 322
V++W +I +S D K+ EM E C RP+ FT + L +C A+ GKQI
Sbjct: 440 VVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQI 499
Query: 323 HAFLFRTRQ-YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGL 381
HA+ R +Q + V N L++MYAKCGSI A VF M +N ++W +++ +G HG
Sbjct: 500 HAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGY 559
Query: 382 GERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFS 441
GE A+ IF++M+ G K D VT +L AC+HSGM+ +G YFN M+ +G++P H++
Sbjct: 560 GEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYA 619
Query: 442 CLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPV 501
CL+D+LGRAGRL+ I + PVV + LS CR+HG + +GE A+ + E+
Sbjct: 620 CLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASN 679
Query: 502 TTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
Y LLSNLYA+ G W +VT R +++ G++K PG +W++
Sbjct: 680 HDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPGCSWVE 722
Score = 186 bits (473), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 139/523 (26%), Positives = 235/523 (44%), Gaps = 68/523 (13%)
Query: 15 KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCG----RVVLARKVFDGMSERNTVSWSA 70
K ++FG +L + L SH L++ Y+ G V L R+ S+ W++
Sbjct: 50 KLLSFG----ILTLNLTSH------LISTYISVGCLSHAVSLLRRF--PPSDAGVYHWNS 97
Query: 71 MISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSG 127
+I Y G L+LF M L P+ + F AC + ++ G+ H LSL +G
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 128 YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFK 187
+ S FV N+L+ MY +C SDA V+ + VS+N++I + + +P+ E+F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 188 LMLQE-GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQF 246
M E G PD + V +L +L G LHC AV + +GN ++ MYA+
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 247 NFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNE------------- 293
++E VF + KDV+SWN ++ +S + F++M E
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 294 ---------------------CSIRPDDFTFASILASCTWHASFLHGKQIHAFL------ 326
I+P++ T S+L+ C + +HGK+IH +
Sbjct: 338 SGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPID 397
Query: 327 FRTRQYWDVG-VHNALVNMYAKCGSIGYAHKVFSKMS--YRNLISWNTMIAAFGNHGLGE 383
R + D V N L++MYAKC + A +F +S R++++W MI + HG
Sbjct: 398 LRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDAN 457
Query: 384 RAIEIFEQMKAEG--VKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHF 440
+A+E+ +M E +P++ T + L+AC +R G ++ ++ P +
Sbjct: 458 KALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP-LFVS 516
Query: 441 SCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
+CLIDM + G +S+ + N+ V SL++ +HG
Sbjct: 517 NCLIDMYAKCGSISDARLVFDNMMAKNE-VTWTSLMTGYGMHG 558
Score = 154 bits (388), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 160/312 (51%), Gaps = 8/312 (2%)
Query: 111 RALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY--NA 168
+ + Q + IH L G +++ S+ LI+ Y+ G S A+S+ +++ Y N+
Sbjct: 39 KTISQVKLIHQKLLSFGILTLNLTSH-LISTYISVGCLSHAVSLLRRFPPSDAGVYHWNS 97
Query: 169 LISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA 228
LI + +N K +F LM + PD ++F + + R G S H ++
Sbjct: 98 LIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG 157
Query: 229 LDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
+GN +++MY++ + + +VF + DV+SWN++I +++ + F
Sbjct: 158 FISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFS 217
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
M NE RPD+ T ++L C + GKQ+H F + ++ V N LV+MYAKC
Sbjct: 218 RMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 349 GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
G + A+ VFS MS ++++SWN M+A + G E A+ +FE+M+ E +K D VT++ +
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAI 337
Query: 409 IACNHSGMVRKG 420
SG ++G
Sbjct: 338 -----SGYAQRG 344
>AT4G18750.1 | Symbols: DOT4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10304850-10307465 FORWARD
LENGTH=871
Length = 871
Score = 347 bits (891), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 178/527 (33%), Positives = 291/527 (55%), Gaps = 3/527 (0%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH +LK G V N L+ Y+K RV ARKVFD M+ER+ +SW+++I+GY G
Sbjct: 217 LHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNGL 276
Query: 81 HWMALHLFSQMKVLPNEFVFASTLS---ACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
L +F QM V E A+ +S CA R + G+ +H + +++ ++ N+
Sbjct: 277 AEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNT 336
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY KCG A +V+ + VSY ++I+G+ + ++F+ M +EG PD
Sbjct: 337 LLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPD 396
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
++ +L G +H + L + N +M MYA+ ++E VF
Sbjct: 397 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 456
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
++ KD+ISWNT+I +S ++ F ++ E PD+ T A +L +C ++F
Sbjct: 457 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 516
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
G++IH ++ R + D V N+LV+MYAKCG++ AH +F ++ ++L+SW MIA +G
Sbjct: 517 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 576
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
HG G+ AI +F QM+ G++ D ++F LL AC+HSG+V +G +FN M I P +
Sbjct: 577 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 636
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
H++C++DML R G L + +I D + G+LL CR+H ++ + E++A+ + E
Sbjct: 637 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 696
Query: 498 VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ P T YVL++N+YA W +V RK + GLRK PG +W++
Sbjct: 697 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Score = 189 bits (479), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 132/464 (28%), Positives = 224/464 (48%), Gaps = 24/464 (5%)
Query: 5 TIGTLLQRC--SKTMTFGLHAAVLKIGLQSHVFVSN---QLLNMYVKCGRVVLARKVFDG 59
T+ ++LQ C SK++ G G V SN +L MY CG + A +VFD
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRG-NGFVIDSNLGSKLSLMYTNCGDLKEASRVFDE 154
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ + W+ +++ + G+ ++ LF +M V + + F+ + +SLR++ G
Sbjct: 155 VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG 214
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+Q+HG L+SG+ + V NSL+ Y+K + A V+ + +S+N++I+G+V N
Sbjct: 215 EQLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSN 274
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
EKG VF ML G D + V + + G ++H VK
Sbjct: 275 GLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
N ++ MY++ ++ VFR + D+ V+S+ ++I ++ G++ F+EM E I
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEE-GI 393
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
PD +T ++L C + GK++H ++ +D+ V NAL++MYAKCGS+ A
Sbjct: 394 SPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAEL 453
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSG 415
VFS+M +++ISWNT+I + + A+ +F + E PD T +L AC
Sbjct: 454 VFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLS 513
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFS------CLIDMLGRAGRL 453
KG +G G+FS L+DM + G L
Sbjct: 514 AFDKG-------REIHGYIMRNGYFSDRHVANSLVDMYAKCGAL 550
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 169/359 (47%), Gaps = 2/359 (0%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
S L CA ++L G+++ +G+ S + + L MY CG +A V+
Sbjct: 96 TLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEV 155
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
++ +N L++ ++ + +FK M+ G D ++F + ++L G
Sbjct: 156 KIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGE 215
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD 278
LH +K +GN +++ Y + ++ +VF + ++DVISWN++IN +
Sbjct: 216 QLHGFILKSGFGERNSVGNSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGYVSNG 275
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
K F +M+ I D T S+ A C G+ +H+ + +
Sbjct: 276 LAEKGLSVFVQMLVS-GIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFC 334
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
N L++MY+KCG + A VF +MS R+++S+ +MIA + GL A+++FE+M+ EG+
Sbjct: 335 NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGIS 394
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
PD T T +L C ++ +G ++ + +I + L+DM + G + E E
Sbjct: 395 PDVYTVTAVLNCCARYRLLDEGKRVHEWIKEN-DLGFDIFVSNALMDMYAKCGSMQEAE 452
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%)
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D T S+L C S GK++ F+ D + + L MY CG + A +VF
Sbjct: 93 DPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVF 152
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
++ + WN ++ G +I +F++M + GV+ DS TF+
Sbjct: 153 DEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFS 199
>AT2G27610.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:11783927-11786533 REVERSE
LENGTH=868
Length = 868
Score = 345 bits (886), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 184/530 (34%), Positives = 304/530 (57%), Gaps = 12/530 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V+K GL + VSN L+N+Y+KCG V AR +FD ++ V+W++MISGY G
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL +F M+ V +E FAS + CA+L+ L +Q+H ++ G+ + +
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 138 LITMYMKCGQCSDALSVYAN--SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
L+ Y KC DAL ++ VG N VS+ A+ISGF++N E+ ++F M ++G
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVG-NVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVR 394
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
P+ F++ +L T L + +H Q VK + + +G ++ Y + +EE +V
Sbjct: 395 PNEFTYSVIL---TALPVI-SPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKV 450
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT-WHA 314
F I DKD+++W+ ++ ++ + + F E+ + I+P++FTF+SIL C +A
Sbjct: 451 FSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGEL-TKGGIKPNEFTFSSILNVCAATNA 509
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
S GKQ H F ++R + V +AL+ MYAK G+I A +VF + ++L+SWN+MI+
Sbjct: 510 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 569
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
+ HG +A+++F++MK VK D VTF G+ AC H+G+V +G+ YF+ M IA
Sbjct: 570 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 629
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
P H SC++D+ RAG+L + + I + + ++L+ACRVH +G A+
Sbjct: 630 PTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEK 689
Query: 495 LLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
++ + P ++ YVLLSN+YA G W E RK++ ++KEPGY+W++
Sbjct: 690 IIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIE 739
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 133/476 (27%), Positives = 226/476 (47%), Gaps = 10/476 (2%)
Query: 13 CSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMI 72
C + LH +K G V V L++ Y+K RKVFD M ERN V+W+ +I
Sbjct: 107 CDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLI 166
Query: 73 SGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA 129
SGY + + L LF +M+ PN F FA+ L A +G Q+H + +++G
Sbjct: 167 SGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLD 226
Query: 130 SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
VSNSLI +Y+KCG A ++ + + V++N++ISG+ N + +F M
Sbjct: 227 KTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSM 286
Query: 190 LQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
SF ++ NL + R LHC VK I +M Y++ +
Sbjct: 287 RLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCTAM 346
Query: 250 EEVVRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+ +R+F+ I +V+SW +I+ F D + ++ F EM + +RP++FT++ IL
Sbjct: 347 LDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRK-GVRPNEFTYSVILT 405
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
+ + ++HA + +T V AL++ Y K G + A KVFS + +++++
Sbjct: 406 AL----PVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVA 461
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
W+ M+A + G E AI++F ++ G+KP+ TF+ +L C + F+
Sbjct: 462 WSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFA 521
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
+ ++ S L+ M + G + EE + K D V S++S HG
Sbjct: 522 IKSRLDSSLCVSSALLTMYAKKGNIESAEE-VFKRQREKDLVSWNSMISGYAQHGQ 576
Score = 145 bits (365), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 208/434 (47%), Gaps = 15/434 (3%)
Query: 45 VKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEF---VFA 101
V R+ A +FD R+ S+ +++ G+ + G A LF + L E +F+
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 102 STLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT 161
S L A+L + G+Q+H ++ G+ V SL+ YMK D V+
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
N V++ LISG+ N ++ +F M EG P+ F+F LG G+ +H
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVH 217
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD-DQ 280
VK LD T + N ++++Y + + + +F + K V++WN++I+ ++ D
Sbjct: 218 TVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDL 277
Query: 281 GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA 340
+F+ +N +R + +FAS++ C +Q+H + + +D + A
Sbjct: 278 EALGMFYSMRLN--YVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 341 LVNMYAKCGSIGYAHKVFSKMS-YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKP 399
L+ Y+KC ++ A ++F ++ N++SW MI+ F + E A+++F +MK +GV+P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 400 DSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEY 459
+ T++ +L A ++ +++ ++ Y + +G + L+D + G+ VEE
Sbjct: 396 NEFTYSVILTAL---PVISPSEVHAQVVKTNYERSSTVG--TALLDAYVKLGK---VEEA 447
Query: 460 INKFHHLNDPVVLG 473
F ++D ++
Sbjct: 448 AKVFSGIDDKDIVA 461
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%), Gaps = 8/194 (4%)
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
M +CSI F+S+L L G+Q+H + DV V +LV+ Y K
Sbjct: 89 MEMDCSI------FSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS 142
Query: 350 SIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
+ KVF +M RN+++W T+I+ + + + + + +F +M+ EG +P+S TF L
Sbjct: 143 NFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALG 202
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDP 469
G+ +G L +++ G+ I + LI++ + G + + +K +
Sbjct: 203 VLAEEGVGGRG-LQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDK-TEVKSV 260
Query: 470 VVLGSLLSACRVHG 483
V S++S +G
Sbjct: 261 VTWNSMISGYAANG 274
>AT4G39530.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:18374736-18377240 REVERSE
LENGTH=834
Length = 834
Score = 342 bits (878), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 301/529 (56%), Gaps = 8/529 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +L+ GL+ + N L++ YVKCGRV+ A K+F+GM +N +SW+ ++SGY Q
Sbjct: 271 IHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNAL 330
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
H A+ LF+ M + P+ + +S L++CASL AL G Q+H ++++ + S+V+NS
Sbjct: 331 HKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNS 390
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE---NHEPEKGFEVFKLMLQEGF 194
LI MY KC +DA V+ + V +NA+I G+ E + +F+ M
Sbjct: 391 LIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLI 450
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
P +FV LL S +L +H K L+ G+ ++ +Y+ +++
Sbjct: 451 RPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRL 510
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
VF ++ KD++ WN++ + + ++ F E+ RPD+FTFA+++ + A
Sbjct: 511 VFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLEL-QLSRERPDEFTFANMVTAAGNLA 569
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
S G++ H L + + + NAL++MYAKCGS AHK F + R+++ WN++I+
Sbjct: 570 SVQLGQEFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAASRDVVCWNSVIS 629
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
++ NHG G++A+++ E+M +EG++P+ +TF G+L AC+H+G+V G F M +GI
Sbjct: 630 SYANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELM-LRFGIE 688
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
P H+ C++ +LGRAGRL++ E I K +V SLLS C GN+ + E A++
Sbjct: 689 PETEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEHAAEM 748
Query: 495 LLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
+ P + + +LSN+YAS GMW E R+ +K G+ KEPG +W+
Sbjct: 749 AILSDPKDSGSFTMLSNIYASKGMWTEAKKVRERMKVEGVVKEPGRSWI 797
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 136/491 (27%), Positives = 243/491 (49%), Gaps = 15/491 (3%)
Query: 6 IGTLLQRCS------KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
+ + +Q CS + M F L + ++K G V+V L++ Y+K G + AR VFD
Sbjct: 149 LSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDA 208
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ E++TV+W+ MISG + G +++L LF Q+ V+P+ ++ ++ LSAC+ L L G
Sbjct: 209 LPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGG 268
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+QIH LR G + + N LI Y+KCG+ A ++ N +S+ L+SG+ +N
Sbjct: 269 KQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQN 328
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
++ E+F M + G PD ++ +L +L G +H +K L +
Sbjct: 329 ALHKEAMELFTSMSKFGLKPDMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVT 388
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQ---GKSFLFFKEMMNE 293
N ++ MYA+ + + + +VF + DV+ +N +I +S Q ++ F++M
Sbjct: 389 NSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFR 448
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGY 353
IRP TF S+L + S KQIH +F+ D+ +AL+++Y+ C +
Sbjct: 449 L-IRPSLLTFVSLLRASASLTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKD 507
Query: 354 AHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
+ VF +M ++L+ WN+M A + E A+ +F +++ +PD TF ++ A +
Sbjct: 508 SRLVFDEMKVKDLVIWNSMFAGYVQQSENEEALNLFLELQLSRERPDEFTFANMVTAAGN 567
Query: 414 SGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLG 473
V+ G F+ G+ N + L+DM + G + + + D V
Sbjct: 568 LASVQLGQ-EFHCQLLKRGLECNPYITNALLDMYAKCGSPEDAHKAFDSAAS-RDVVCWN 625
Query: 474 SLLSACRVHGN 484
S++S+ HG
Sbjct: 626 SVISSYANHGE 636
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/399 (28%), Positives = 201/399 (50%), Gaps = 10/399 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H ++ GL+ ++SN L+N+Y + G +V ARKVF+ M ERN VSWS M+S + G
Sbjct: 66 VHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMPERNLVSWSTMVSACNHHGI 125
Query: 81 HWMALHLFSQM----KVLPNEFVFASTLSACASL--RALVQGQQIHGLSLRSGYASISFV 134
+ +L +F + K PNE++ +S + AC+ L R Q+ ++SG+ +V
Sbjct: 126 YEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYV 185
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
LI Y+K G A V+ ++V++ +ISG V+ ++F ++++
Sbjct: 186 GTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQLMEDNV 245
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
VPD + +L + L G +H ++ L+ + NV++ Y + + +
Sbjct: 246 VPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYVKCGRVIAAHK 305
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
+F + +K++ISW TL++ + ++ F M++ ++PD + +SIL SC
Sbjct: 306 LFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTS-MSKFGLKPDMYACSSILTSCASLH 364
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
+ G Q+HA+ + D V N+L++MYAKC + A KVF + +++ +N MI
Sbjct: 365 ALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIFAAADVVLFNAMIE 424
Query: 375 AFGNHGLG---ERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
+ G A+ IF M+ ++P +TF LL A
Sbjct: 425 GYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRA 463
Score = 132 bits (331), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 172/373 (46%), Gaps = 17/373 (4%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV 159
FA L AS L +HG + G +++SN LI +Y + G A V+
Sbjct: 47 FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106
Query: 160 GTNSVSYNALISGFVENHEPEKGFEVF-KLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
N VS++ ++S + E+ VF + P+ + + + LD M
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWM 166
Query: 219 SLHCQA--VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH 276
Q+ VK D +G +++ Y + I+ VF + +K ++W T+I+
Sbjct: 167 VFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTTMISGCVK 226
Query: 277 FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
S F ++M E ++ PD + +++L++C+ GKQIHA + R D
Sbjct: 227 MGRSYVSLQLFYQLM-EDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDAS 285
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
+ N L++ Y KCG + AHK+F+ M +N+ISW T+++ + + L + A+E+F M G
Sbjct: 286 LMNVLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFG 345
Query: 397 VKPDSVTFTGLLIACN--HSGMVRKGDLYFNSMEAAYGIAPNIGHFS----CLIDMLGRA 450
+KPD + +L +C H+ L F + AY I N+G+ S LIDM +
Sbjct: 346 LKPDMYACSSILTSCASLHA-------LGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKC 398
Query: 451 GRLSEVEEYINKF 463
L++ + + F
Sbjct: 399 DCLTDARKVFDIF 411
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 130/276 (47%), Gaps = 11/276 (3%)
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
R F LL + D +H Q + L+ + N+++++Y++ + +VF
Sbjct: 44 RREFARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFE 103
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ +++++SW+T+++A +H +S + F E P+++ +S + +C S L
Sbjct: 104 KMPERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQAC----SGL 159
Query: 318 HGK------QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNT 371
G+ Q+ +FL ++ DV V L++ Y K G+I YA VF + ++ ++W T
Sbjct: 160 DGRGRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTVTWTT 219
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
MI+ G ++++F Q+ + V PD + +L AC+ + G ++ Y
Sbjct: 220 MISGCVKMGRSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGK-QIHAHILRY 278
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
G+ + + LID + GR+ + N + N
Sbjct: 279 GLEMDASLMNVLIDSYVKCGRVIAAHKLFNGMPNKN 314
>AT4G13650.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:7939611-7942898 REVERSE
LENGTH=1064
Length = 1064
Score = 342 bits (877), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 187/547 (34%), Positives = 289/547 (52%), Gaps = 8/547 (1%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ +L+ CS T LHA K+G S+ + LLN+Y KC + A F
Sbjct: 391 TLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET 450
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQ 117
N V W+ M+ Y + + +F QM++ +PN++ + S L C L L G+
Sbjct: 451 EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGE 510
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
QIH +++ + ++V + LI MY K G+ A + G + VS+ +I+G+ + +
Sbjct: 511 QIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYN 570
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
+K F+ ML G D + L + G +H QA N
Sbjct: 571 FDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQN 630
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
++++Y++ IEE F + D I+WN L++ F + ++ F M E I
Sbjct: 631 ALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNRE-GID 689
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
++FTF S + + + A+ GKQ+HA + +T + V NAL++MYAKCGSI A K
Sbjct: 690 NNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQ 749
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
F ++S +N +SWN +I A+ HG G A++ F+QM V+P+ VT G+L AC+H G+V
Sbjct: 750 FLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLV 809
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
KG YF SM + YG++P H+ C++DML RAG LS +E+I + D +V +LLS
Sbjct: 810 DKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLS 869
Query: 478 ACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
AC VH NM IGE A LLE+ P ++ YVLLSNLYA W+ R+ +K G++KE
Sbjct: 870 ACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKE 929
Query: 538 PGYAWLK 544
PG +W++
Sbjct: 930 PGQSWIE 936
Score = 235 bits (600), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 134/438 (30%), Positives = 231/438 (52%), Gaps = 5/438 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +L GL+ V N L+++Y + G V LAR+VFDG+ ++ SW AMISG +
Sbjct: 209 IHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNEC 268
Query: 81 HWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
A+ LF M VL P + F+S LSAC + +L G+Q+HGL L+ G++S ++V N+
Sbjct: 269 EAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNA 328
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+++Y G A +++N ++V+YN LI+G + EK E+FK M +G PD
Sbjct: 329 LVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPD 388
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+ L+ + G LH KL I ++++YA+ IE + F
Sbjct: 389 SNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFL 448
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ ++V+ WN ++ A+ DD SF F++M E I P+ +T+ SIL +C
Sbjct: 449 ETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIE-EIVPNQYTYPSILKTCIRLGDLE 507
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
G+QIH+ + +T + V + L++MYAK G + A + + + ++++SW TMIA +
Sbjct: 508 LGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYT 567
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
+ ++A+ F QM G++ D V T + AC +++G ++ G + ++
Sbjct: 568 QYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQ-QIHAQACVSGFSSDL 626
Query: 438 GHFSCLIDMLGRAGRLSE 455
+ L+ + R G++ E
Sbjct: 627 PFQNALVTLYSRCGKIEE 644
Score = 217 bits (552), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 242/483 (50%), Gaps = 10/483 (2%)
Query: 8 TLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER 63
++L C K + LH VLK+G S +V N L+++Y G ++ A +F MS+R
Sbjct: 293 SVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQR 352
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIH 120
+ V+++ +I+G QCG A+ LF +M + P+ AS + AC++ L +GQQ+H
Sbjct: 353 DAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLH 412
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
+ + G+AS + + +L+ +Y KC AL + + N V +N ++ + +
Sbjct: 413 AYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLR 472
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
F +F+ M E VP+++++ +L L D G +H Q +K + +V++
Sbjct: 473 NSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLI 532
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
MYA+ ++ + KDV+SW T+I ++ ++ K+ F++M++ IR D+
Sbjct: 533 DMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDR-GIRSDE 591
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+ +++C + G+QIHA + D+ NALV +Y++CG I ++ F +
Sbjct: 592 VGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQ 651
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+ I+WN +++ F G E A+ +F +M EG+ ++ TF + A + + +++G
Sbjct: 652 TEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQG 711
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACR 480
+++ G + LI M + G +S+ E+ + N+ V ++++A
Sbjct: 712 K-QVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNE-VSWNAIINAYS 769
Query: 481 VHG 483
HG
Sbjct: 770 KHG 772
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 137/476 (28%), Positives = 221/476 (46%), Gaps = 25/476 (5%)
Query: 4 ETIGTLLQRCSKT---MTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
+T+ LL+ C KT + G LH+ +LK+GL S+ +S +L + Y+ G + A KVFD
Sbjct: 85 QTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFD 144
Query: 59 GMSERNTVSWSAMI---SGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSAC-ASLR 111
M ER +W+ MI + + GE LF +M V PNE F+ L AC
Sbjct: 145 EMPERTIFTWNKMIKELASRNLIGE---VFGLFVRMVSENVTPNEGTFSGVLEACRGGSV 201
Query: 112 ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALIS 171
A +QIH L G + V N LI +Y + G A V+ + S+ A+IS
Sbjct: 202 AFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMIS 261
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
G +N + +F M G +P ++F +L ++ G LH +KL
Sbjct: 262 GLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSS 321
Query: 232 TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM 291
+ N ++S+Y + +F + +D +++NTLIN S K+ FK M
Sbjct: 322 DTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMH 381
Query: 292 NECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI 351
+ + PD T AS++ +C+ + G+Q+HA+ + + + AL+N+YAKC I
Sbjct: 382 LD-GLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCADI 440
Query: 352 GYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
A F + N++ WN M+ A+G + IF QM+ E + P+ T+ +L C
Sbjct: 441 ETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTC 500
Query: 412 NHSGMVRKGDLYFNSMEAAYGIAPN--IGHFSC--LIDMLGRAGRLSEVEEYINKF 463
+R GDL + I N + + C LIDM + G+L + + +F
Sbjct: 501 -----IRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRF 551
Score = 135 bits (339), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 193/418 (46%), Gaps = 13/418 (3%)
Query: 49 RVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS--QMKVLPNEFVFASTLSA 106
R + R VF + S++A IS Y E + + S + PN L
Sbjct: 35 RKLKTRTVFPTLCGTRRASFAA-ISVYISEDESFQEKRIDSVENRGIRPNHQTLKWLLEG 93
Query: 107 CASLR-ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVS 165
C +L +G+++H L+ G S +S L Y+ G A V+ +
Sbjct: 94 CLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFT 153
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL----GFSTNLDDFRTGMSLH 221
+N +I + + F +F M+ E P+ +F G+L G S D +H
Sbjct: 154 WNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVE---QIH 210
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
+ + L + ++ N ++ +Y++ F++ RVF ++ KD SW +I+ S + +
Sbjct: 211 ARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEA 270
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
++ F +M I P + F+S+L++C S G+Q+H + + D V NAL
Sbjct: 271 EAIRLFCDMY-VLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNAL 329
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
V++Y G++ A +FS MS R+ +++NT+I G GE+A+E+F++M +G++PDS
Sbjct: 330 VSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDS 389
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEY 459
T L++AC+ G + +G ++ G A N L+++ + + +Y
Sbjct: 390 NTLASLVVACSADGTLFRGQ-QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDY 446
>AT1G15510.1 | Symbols: ATECB2, ECB2, VAC1 | Tetratricopeptide
repeat (TPR)-like superfamily protein |
chr1:5329111-5331711 FORWARD LENGTH=866
Length = 866
Score = 338 bits (867), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 183/527 (34%), Positives = 299/527 (56%), Gaps = 7/527 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V++ G + + V N L+ MYVKCG V AR +FD M R+ +SW+AMISGY + G
Sbjct: 218 VHVHVVRYGYELDIDVVNALITMYVKCGDVKSARLLFDRMPRRDIISWNAMISGYFENGM 277
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
L LF M+ V P+ S +SAC L G+ IH + +G+A V NS
Sbjct: 278 CHEGLELFFAMRGLSVDPDLMTLTSVISACELLGDRRLGRDIHAYVITTGFAVDISVCNS 337
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L MY+ G +A +++ + VS+ +ISG+ N P+K + +++M Q+ PD
Sbjct: 338 LTQMYLNAGSWREAEKLFSRMERKDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPD 397
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+ +L L D TG+ LH A+K L ++ N +++MY++ I++ + +F
Sbjct: 398 EITVAAVLSACATLGDLDTGVELHKLAIKARLISYVIVANNLINMYSKCKCIDKALDIFH 457
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
I K+VISW ++I + ++ +F ++M + +++P+ T + LA+C + +
Sbjct: 458 NIPRKNVISWTSIIAGLRLNNRCFEALIFLRQM--KMTLQPNAITLTAALAACARIGALM 515
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
GK+IHA + RT D + NAL++MY +CG + A F+ +++ SWN ++ +
Sbjct: 516 CGKEIHAHVLRTGVGLDDFLPNALLDMYVRCGRMNTAWSQFNSQK-KDVTSWNILLTGYS 574
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
G G +E+F++M V+PD +TF LL C+ S MVR+G +YF+ ME YG+ PN+
Sbjct: 575 ERGQGSMVVELFDRMVKSRVRPDEITFISLLCGCSKSQMVRQGLMYFSKMED-YGVTPNL 633
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
H++C++D+LGRAG L E ++I K DP V G+LL+ACR+H + +GE A+ + E
Sbjct: 634 KHYACVVDLLGRAGELQEAHKFIQKMPVTPDPAVWGALLNACRIHHKIDLGELSAQHIFE 693
Query: 498 VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ + Y+LL NLYA G W EV R+M+K +GL + G +W++
Sbjct: 694 LDKKSVGYYILLCNLYADCGKWREVAKVRRMMKENGLTVDAGCSWVE 740
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 127/429 (29%), Positives = 214/429 (49%), Gaps = 15/429 (3%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM-- 91
V + N L M+V+ G +V A VF MSERN SW+ ++ GY + G A+ L+ +M
Sbjct: 129 VELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLW 188
Query: 92 --KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCS 149
V P+ + F L C + L +G+++H +R GY V N+LITMY+KCG
Sbjct: 189 VGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYVKCGDVK 248
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
A ++ + +S+NA+ISG+ EN +G E+F M PD + ++
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
L D R G +H + + N + MY E ++F ++ KD++SW T
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMERKDIVSWTT 368
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
+I+ + + K+ ++ MM++ S++PD+ T A++L++C G ++H +
Sbjct: 369 MISGYEYNFLPDKAIDTYR-MMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLAIKA 427
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
R V V N L+NMY+KC I A +F + +N+ISW ++IA + A+
Sbjct: 428 RLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEALIFL 487
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIA---PNIGHFSCLID 445
QMK ++P+++T T L AC G + G +++ + + G+ PN L+D
Sbjct: 488 RQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPN-----ALLD 541
Query: 446 MLGRAGRLS 454
M R GR++
Sbjct: 542 MYVRCGRMN 550
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 167/380 (43%), Gaps = 46/380 (12%)
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
+ G N + E+ ++ M + D FV L+ G ++ A+
Sbjct: 66 LHGLCANGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMS 125
Query: 230 DCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS---HFDDQGKSFLF 286
+GN ++M+ +F + + VF + ++++ SWN L+ ++ +FD+ +
Sbjct: 126 SLGVELGNAFLAMFVRFGNLVDAWYVFGKMSERNLFSWNVLVGGYAKQGYFDE---AMCL 182
Query: 287 FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYA 346
+ M+ ++PD +TF +L +C GK++H + R D+ V NAL+ MY
Sbjct: 183 YHRMLWVGGVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGYELDIDVVNALITMYV 242
Query: 347 KCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTG 406
KCG + A +F +M R++ISWN MI+ + +G+ +E+F M+ V PD +T T
Sbjct: 243 KCGDVKSARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTS 302
Query: 407 LLIACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHH 465
++ AC G R G D++ + G A +I + L M AG E E+ ++
Sbjct: 303 VISACELLGDRRLGRDIH--AYVITTGFAVDISVCNSLTQMYLNAGSWREAEKLFSRMER 360
Query: 466 LN----------------------------------DPVVLGSLLSACRVHGNMAIGERL 491
+ D + + ++LSAC G++ G L
Sbjct: 361 KDIVSWTTMISGYEYNFLPDKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVEL 420
Query: 492 AKLLLEVPPVTTSPYVLLSN 511
KL ++ ++ YV+++N
Sbjct: 421 HKLAIKARLIS---YVIVAN 437
>AT4G33170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15995701-15998673 REVERSE
LENGTH=990
Length = 990
Score = 337 bits (865), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 183/528 (34%), Positives = 296/528 (56%), Gaps = 6/528 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H LK+GL + VSN L+NMY K + AR VFD MSER+ +SW+++I+G Q G
Sbjct: 337 VHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGL 396
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASL-RALVQGQQIHGLSLRSGYASISFVSN 136
A+ LF Q+ + P+++ S L A +SL L +Q+H +++ S SFVS
Sbjct: 397 EVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVST 456
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+LI Y + +C + + V++NA+++G+ ++H+ K ++F LM ++G
Sbjct: 457 ALIDAYSR-NRCMKEAEILFERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERS 515
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D F+ + L G +H A+K D + + I+ MY + + F
Sbjct: 516 DDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAF 575
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
I D ++W T+I+ ++ ++F F +M + PD+FT A++ + + +
Sbjct: 576 DSIPVPDDVAWTTMISGCIENGEEERAFHVFSQM-RLMGVLPDEFTIATLAKASSCLTAL 634
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
G+QIHA + D V +LV+MYAKCGSI A+ +F ++ N+ +WN M+
Sbjct: 635 EQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGL 694
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
HG G+ +++F+QMK+ G+KPD VTF G+L AC+HSG+V + + SM YGI P
Sbjct: 695 AQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
I H+SCL D LGRAG + + E I + +LL+ACRV G+ G+R+A LL
Sbjct: 755 IEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLL 814
Query: 497 EVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
E+ P+ +S YVLLSN+YA+ W+E+ AR M+KG ++K+PG++W++
Sbjct: 815 ELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIE 862
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/404 (25%), Positives = 202/404 (50%), Gaps = 15/404 (3%)
Query: 72 ISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
+S Y G++ L F+ M V ++ F L+ + +L GQQ+H ++L+ G
Sbjct: 287 LSEYLHSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGL 346
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
+ VSNSLI MY K + A +V+ N + +S+N++I+G +N + +F
Sbjct: 347 DLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQ 406
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSL----HCQAVKLALDCTPLIGNVIMSMYA 244
+L+ G PD+++ +L +++L + G+SL H A+K+ + ++ Y+
Sbjct: 407 LLRCGLKPDQYTMTSVLKAASSLPE---GLSLSKQVHVHAIKINNVSDSFVSTALIDAYS 463
Query: 245 QFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFA 304
+ ++E +F + D+++WN ++ ++ D K+ F +M++ R DDFT A
Sbjct: 464 RNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFA-LMHKQGERSDDFTLA 521
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR 364
++ +C + + GKQ+HA+ ++ D+ V + +++MY KCG + A F +
Sbjct: 522 TVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVP 581
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLY 423
+ ++W TMI+ +G ERA +F QM+ GV PD T L A + + +G ++
Sbjct: 582 DDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIH 641
Query: 424 FNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
N+++ P +G + L+DM + G + + + +N
Sbjct: 642 ANALKLNCTNDPFVG--TSLVDMYAKCGSIDDAYCLFKRIEMMN 683
Score = 134 bits (338), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 174/397 (43%), Gaps = 41/397 (10%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
HA +L F+ N L++MY KCG + AR+VFD M +R+ VSW+++++ Y Q E
Sbjct: 62 HARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSILAAYAQSSEC 121
Query: 82 WMA--LHLFSQMKVLPNEFVFASTLSACASLRALVQ------GQQIHGLSLRSGYASISF 133
+ F ++L + V+ S ++ L+ + + HG + + G F
Sbjct: 122 VVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYACKIGLDGDEF 181
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
V+ +L+ +Y+K G+ + ++ + V +N ++ ++E E+ ++ G
Sbjct: 182 VAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSG 241
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
P+ + L S DD G + +A N V
Sbjct: 242 LNPNEITLRLLARISG--DDSDAGQ---------------------VKSFANGNDASSV- 277
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
++I N ++ + H F +M+ E + D TF +LA+
Sbjct: 278 --------SEIIFRNKGLSEYLHSGQYSALLKCFADMV-ESDVECDQVTFILMLATAVKV 328
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
S G+Q+H + + V N+L+NMY K G+A VF MS R+LISWN++I
Sbjct: 329 DSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVI 388
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
A +GL A+ +F Q+ G+KPD T T +L A
Sbjct: 389 AGIAQNGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKA 425
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 213/475 (44%), Gaps = 56/475 (11%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
H KIGL FV+ L+N+Y+K G+V + +F+ M R+ V W+ M+ Y + G
Sbjct: 168 HGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFK 227
Query: 82 WMALHL---FSQMKVLPNEFVFASTLSACASLRALVQGQ-----QIHGLSLRSGYASISF 133
A+ L F + PNE L A + G Q+ + + +S+S
Sbjct: 228 EEAIDLSSAFHSSGLNPNEITL--------RLLARISGDDSDAGQVKSFANGNDASSVSE 279
Query: 134 V--SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
+ N ++ Y+ GQ Y+AL+ F + M++
Sbjct: 280 IIFRNKGLSEYLHSGQ------------------YSALLKCFAD-------------MVE 308
Query: 192 EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEE 251
D+ +F+ +L + +D G +HC A+KL LD + N +++MY +
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGF 368
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL-ASC 310
VF + ++D+ISWN++I + + ++ F +++ C ++PD +T S+L A+
Sbjct: 369 ARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLL-RCGLKPDQYTMTSVLKAAS 427
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+ KQ+H + D V AL++ Y++ + A +F + ++ +L++WN
Sbjct: 428 SLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILFERHNF-DLVAWN 486
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEA 429
M+A + G + +++F M +G + D T + C + +G ++ ++++
Sbjct: 487 AMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS 546
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
Y + ++ S ++DM + G +S + + + D V +++S C +G
Sbjct: 547 GYDL--DLWVSSGILDMYVKCGDMSAAQFAFDSI-PVPDDVAWTTMISGCIENGE 598
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%)
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK 262
G L + D G H + + + + N ++SMY++ + RVF + D+
Sbjct: 44 GFLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDR 103
Query: 263 DVISWNTLINAFSH-----FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
D++SWN+++ A++ ++ ++FL F+ ++ + + T + +L C
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFR-ILRQDVVYTSRMTLSPMLKLCLHSGYVW 162
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
+ H + + D V ALVN+Y K G + +F +M YR+++ WN M+ A+
Sbjct: 163 ASESFHGYACKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYL 222
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTF 404
G E AI++ + G+ P+ +T
Sbjct: 223 EMGFKEEAIDLSSAFHSSGLNPNEITL 249
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 12/130 (9%)
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
+ + GK HA + + + + N L++MY+KCGS+ YA +VF KM R+L+SWN+++
Sbjct: 53 SDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSIL 112
Query: 374 AAFGNHGLG-----ERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
AA+ ++A +F ++ + V +T + +L C HSG Y + E
Sbjct: 113 AAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSG-------YVWASE 165
Query: 429 AAYGIAPNIG 438
+ +G A IG
Sbjct: 166 SFHGYACKIG 175
>AT3G09040.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2761195-2764281 REVERSE
LENGTH=1028
Length = 1028
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 185/549 (33%), Positives = 299/549 (54%), Gaps = 12/549 (2%)
Query: 5 TIGTLLQRCSKT----MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +LL C+ + M H+ ++K L ++FV N L++MY KCG + AR++F+ M
Sbjct: 430 TFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM 489
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQ 117
+R+ V+W+ +I Y Q A LF +M ++ + ASTL AC + L QG+
Sbjct: 490 CDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGK 549
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
Q+H LS++ G +SLI MY KCG DA V+++ + VS NALI+G+ +N+
Sbjct: 550 QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNN 609
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCT-PLIG 236
E+ +F+ ML G P +F ++ + G H Q K +G
Sbjct: 610 -LEEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLG 668
Query: 237 NVIMSMYAQFNFIEEVVRVF-RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
++ MY + E +F L K ++ W +++ S ++ F+KEM ++
Sbjct: 669 ISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHD-G 727
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
+ PD TF ++L C+ +S G+ IH+ +F D N L++MYAKCG + +
Sbjct: 728 VLPDQATFVTVLRVCSVLSSLREGRAIHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSS 787
Query: 356 KVFSKMSYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+VF +M R N++SWN++I + +G E A++IF+ M+ + PD +TF G+L AC+H+
Sbjct: 788 QVFDEMRRRSNVVSWNSLINGYAKNGYAEDALKIFDSMRQSHIMPDEITFLGVLTACSHA 847
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGS 474
G V G F M YGI + H +C++D+LGR G L E +++I + D + S
Sbjct: 848 GKVSDGRKIFEMMIGQYGIEARVDHVACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSS 907
Query: 475 LLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGL 534
LL ACR+HG+ GE A+ L+E+ P +S YVLLSN+YAS G W + + RK+++ G+
Sbjct: 908 LLGACRIHGDDIRGEISAEKLIELEPQNSSAYVLLSNIYASQGCWEKANALRKVMRDRGV 967
Query: 535 RKEPGYAWL 543
+K PGY+W+
Sbjct: 968 KKVPGYSWI 976
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 133/466 (28%), Positives = 242/466 (51%), Gaps = 14/466 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +K+GL S+++V + L++MY KC ++ A KVF+ + E+N V W+AMI GY GE
Sbjct: 349 VHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGE 408
Query: 81 HWMALHLFSQMKVLP---NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ LF MK ++F F S LS CA+ L G Q H + ++ A FV N+
Sbjct: 409 SHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNA 468
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY KCG DA ++ ++V++N +I +V++ + F++FK M G V D
Sbjct: 469 LVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSD 528
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
L T++ G +HC +VK LD G+ ++ MY++ I++ +VF
Sbjct: 529 GACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFS 588
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ + V+S N LI +S ++ ++ + F+EM+ + P + TFA+I+ +C S
Sbjct: 589 SLPEWSVVSMNALIAGYSQ-NNLEEAVVLFQEMLTR-GVNPSEITFATIVEACHKPESLT 646
Query: 318 HGKQIHAFLFRTRQYWDVGVH--NALVNMYAKCGSIGYAHKVFSKMSY-RNLISWNTMIA 374
G Q H + + R + G + +L+ MY + A +FS++S ++++ W M++
Sbjct: 647 LGTQFHGQITK-RGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMS 705
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
+G E A++ +++M+ +GV PD TF +L C+ +R+G + + + +A
Sbjct: 706 GHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAIHSLI---FHLA 762
Query: 435 PNIGHFS--CLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
++ + LIDM + G + + ++ ++ V SL++
Sbjct: 763 HDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLING 808
Score = 207 bits (526), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 120/376 (31%), Positives = 197/376 (52%), Gaps = 5/376 (1%)
Query: 40 LLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPN 96
++N Y++ G++ AR +F MS + V+W+ MISG+ + G +A+ F M+ V
Sbjct: 267 VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKST 326
Query: 97 EFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYA 156
S LSA + L G +H +++ G AS +V +SL++MY KC + A V+
Sbjct: 327 RSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFE 386
Query: 157 NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRT 216
N V +NA+I G+ N E K E+F M G+ D F+F LL D
Sbjct: 387 ALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEM 446
Query: 217 GMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH 276
G H +K L +GN ++ MYA+ +E+ ++F + D+D ++WNT+I ++
Sbjct: 447 GSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQ 506
Query: 277 FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
+++ ++F FK MN C I D AS L +CT GKQ+H + D+
Sbjct: 507 DENESEAFDLFKR-MNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLH 565
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
++L++MY+KCG I A KVFS + +++S N +IA + + L E A+ +F++M G
Sbjct: 566 TGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRG 624
Query: 397 VKPDSVTFTGLLIACN 412
V P +TF ++ AC+
Sbjct: 625 VNPSEITFATIVEACH 640
Score = 183 bits (464), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/464 (25%), Positives = 221/464 (47%), Gaps = 50/464 (10%)
Query: 5 TIGTLLQRCSK--TMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +L C++ + FG +H +++K+GL+ + + L++MY KC R+ AR+VF+ +
Sbjct: 162 TFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRVFEWI 221
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQ 117
+ NTV W+ + SGY + G A+ +F +M+ P+ F +
Sbjct: 222 VDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVT--------------- 266
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
+I Y++ G+ DA ++ + V++N +ISG +
Sbjct: 267 --------------------VINTYIRLGKLKDARLLFGEMSSPDVVAWNVMISGHGKRG 306
Query: 178 EPEKGFEVFKLMLQEGFVPDRF---SFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
E F M + R S + +G NLD G+ +H +A+KL L
Sbjct: 307 CETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLD---LGLVVHAEAIKLGLASNIY 363
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
+G+ ++SMY++ +E +VF +++K+ + WN +I ++H + K F +M +
Sbjct: 364 VGSSLVSMYSKCEKMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSS- 422
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
DDFTF S+L++C G Q H+ + + + ++ V NALV+MYAKCG++ A
Sbjct: 423 GYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKCGALEDA 482
Query: 355 HKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
++F +M R+ ++WNT+I ++ A ++F++M G+ D L AC H
Sbjct: 483 RQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLASTLKACTHV 542
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEE 458
+ +G + + G+ ++ S LIDM + G + + +
Sbjct: 543 HGLYQGK-QVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARK 585
Score = 181 bits (458), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/457 (26%), Positives = 216/457 (47%), Gaps = 43/457 (9%)
Query: 11 QRCSKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSW 68
QR + + G +H+ L +G+ S + N ++++Y KC +V A K FD + E++ +W
Sbjct: 70 QRLALALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL-EKDVTAW 128
Query: 69 SAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
++M+S Y G+ L F + ++ PN+F F+ LS CA + G+QIH ++
Sbjct: 129 NSMLSMYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIK 188
Query: 126 SGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEV 185
G S+ +L+ MY KC + SDA V+ V N+V + L SG+V+ PE+ V
Sbjct: 189 MGLERNSYCGGALVDMYAKCDRISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLV 248
Query: 186 FKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ 245
F+ M EG PD +FV +++ Y +
Sbjct: 249 FERMRDEGHRPDHLAFV-----------------------------------TVINTYIR 273
Query: 246 FNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFAS 305
+++ +F + DV++WN +I+ + + +F M + S++ T S
Sbjct: 274 LGKLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFN-MRKSSVKSTRSTLGS 332
Query: 306 ILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRN 365
+L++ A+ G +HA + ++ V ++LV+MY+KC + A KVF + +N
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
+ WN MI + ++G + +E+F MK+ G D TFT LL C S + G F+
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGS-QFH 451
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINK 462
S+ +A N+ + L+DM + G L + + +
Sbjct: 452 SIIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFER 488
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/400 (23%), Positives = 166/400 (41%), Gaps = 45/400 (11%)
Query: 71 MISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYAS 130
++ +DQ + + + L Q K+ + VF A AL G+ +H SL G S
Sbjct: 37 VLPSHDQIHQRLLEICL-GQCKLFKSRKVFDEMPQRLA--LALRIGKAVHSKSLILGIDS 93
Query: 131 ISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
+ N+++ +Y KC Q S A + + + + ++N+++S + +P K F +
Sbjct: 94 EGRLGNAIVDLYAKCAQVSYAEKQF-DFLEKDVTAWNSMLSMYSSIGKPGKVLRSFVSLF 152
Query: 191 QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
+ P++F+F +L + G +HC +K+ L+ G ++ MYA+ + I
Sbjct: 153 ENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRIS 212
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+ RVF I D + + W L + + ++ L F+ M +E RPD F ++
Sbjct: 213 DARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFERMRDE-GHRPDHLAFVTV---- 267
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+N Y + G + A +F +MS ++++WN
Sbjct: 268 -------------------------------INTYIRLGKLKDARLLFGEMSSPDVVAWN 296
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD--LYFNSME 428
MI+ G G AIE F M+ VK T +L A G+V D L ++
Sbjct: 297 VMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAI---GIVANLDLGLVVHAEA 353
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND 468
G+A NI S L+ M + ++ + ND
Sbjct: 354 IKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKND 393
>AT4G33990.1 | Symbols: EMB2758 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr4:16290141-16292612
REVERSE LENGTH=823
Length = 823
Score = 337 bits (863), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 191/543 (35%), Positives = 295/543 (54%), Gaps = 9/543 (1%)
Query: 4 ETIGTLLQRCSKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
T ++L+ C +T+ G +H LK G V+V+ L+++Y + V AR +FD M
Sbjct: 154 RTFPSVLKAC-RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMP 212
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHG 121
R+ SW+AMISGY Q G AL L + ++ + + S LSAC +G IH
Sbjct: 213 VRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM-DSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
S++ G S FVSN LI +Y + G+ D V+ + +S+N++I + N +P +
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 331
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL---DCTPLIGNV 238
+F+ M PD + + L + L D R S+ ++ D T IGN
Sbjct: 332 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDIT--IGNA 389
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
++ MYA+ ++ VF + + DVISWNT+I+ ++ ++ + M E I
Sbjct: 390 VVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAA 449
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
+ T+ S+L +C+ + G ++H L + Y DV V +L +MY KCG + A +F
Sbjct: 450 NQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLF 509
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
++ N + WNT+IA G HG GE+A+ +F++M EGVKPD +TF LL AC+HSG+V
Sbjct: 510 YQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVD 569
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
+G F M+ YGI P++ H+ C++DM GRAG+L ++I D + G+LLSA
Sbjct: 570 EGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSA 629
Query: 479 CRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEP 538
CRVHGN+ +G+ ++ L EV P +VLLSN+YAS G W V R + G GLRK P
Sbjct: 630 CRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTP 689
Query: 539 GYA 541
G++
Sbjct: 690 GWS 692
Score = 202 bits (513), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 142/511 (27%), Positives = 252/511 (49%), Gaps = 22/511 (4%)
Query: 3 LETIGTLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
++ + TL + C+ + LHA ++ +V +S +L+N+Y G V LAR FD +
Sbjct: 54 IDDVHTLFRYCTNLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNVALARHTFDHIQ 113
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFS----QMKVLPNEFVFASTLSACASLRALVQGQ 117
R+ +W+ MISGY + G + FS + P+ F S L AC R ++ G
Sbjct: 114 NRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDGN 170
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
+IH L+L+ G+ +V+ SLI +Y + +A ++ + S+NA+ISG+ ++
Sbjct: 171 KIHCLALKFGFMWDVYVAASLIHLYSRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSG 230
Query: 178 EPEKGFEVFKLMLQEGFVP-DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
++ L L G D + V LL T DF G+++H ++K L+ +
Sbjct: 231 NAKEA-----LTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVS 285
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
N ++ +YA+F + + +VF + +D+ISWN++I A+ + ++ F+E M I
Sbjct: 286 NKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAISLFQE-MRLSRI 344
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW-DVGVHNALVNMYAKCGSIGYAH 355
+PD T S+ + + + + F R + D+ + NA+V MYAK G + A
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHS 414
VF+ + ++ISWNT+I+ + +G AIE++ M+ EG + + T+ +L AC+ +
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGS 474
G +R+G + + G+ ++ + L DM G+ GRL + + +N V +
Sbjct: 465 GALRQG-MKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNS--VPWN 521
Query: 475 LLSACRVHGNMAIGERLAKLLLEVPPVTTSP 505
L AC HG GE+ L E+ P
Sbjct: 522 TLIAC--HGFHGHGEKAVMLFKEMLDEGVKP 550
>AT3G57430.1 | Symbols: OTP84 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:21255731-21258403 REVERSE
LENGTH=890
Length = 890
Score = 334 bits (856), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 178/540 (32%), Positives = 300/540 (55%), Gaps = 17/540 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA L+ G + + F+ N L+ MY K G++ ++ + R+ V+W+ ++S Q +
Sbjct: 224 VHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQ 282
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSG-YASISFVSN 136
AL +M V P+EF +S L AC+ L L G+++H +L++G SFV +
Sbjct: 283 LLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGS 342
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE-GFV 195
+L+ MY C Q V+ +NA+I+G+ +N ++ +F M + G +
Sbjct: 343 ALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLL 402
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
+ + G++ F ++H VK LD + N +M MY++ I+ +R+
Sbjct: 403 ANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRI 462
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN----------ECSIRPDDFTFAS 305
F ++D+D+++WNT+I + + + L +M N S++P+ T +
Sbjct: 463 FGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMT 522
Query: 306 ILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRN 365
IL SC ++ GK+IHA+ + DV V +ALV+MYAKCG + + KVF ++ +N
Sbjct: 523 ILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN 582
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
+I+WN +I A+G HG G+ AI++ M +GVKP+ VTF + AC+HSGMV +G F
Sbjct: 583 VITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFY 642
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF-HHLNDPVVLGSLLSACRVHGN 484
M+ YG+ P+ H++C++D+LGRAGR+ E + +N N SLL A R+H N
Sbjct: 643 VMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNN 702
Query: 485 MAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ IGE A+ L+++ P S YVLL+N+Y+S G+W++ T R+ +K G+RKEPG +W++
Sbjct: 703 LEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIE 762
Score = 210 bits (535), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 144/485 (29%), Positives = 244/485 (50%), Gaps = 26/485 (5%)
Query: 21 LHAAVLKIGLQ-SHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+HA V K G V V+N L+N+Y KCG KVFD +SERN VSW+++IS C
Sbjct: 119 IHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSL--CS 176
Query: 80 -EHW-MALHLFSQM---KVLPNEFVFASTLSACASL---RALVQGQQIHGLSLRSGYASI 131
E W MAL F M V P+ F S ++AC++L L+ G+Q+H LR G +
Sbjct: 177 FEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELN- 235
Query: 132 SFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
SF+ N+L+ MY K G+ + + + + G + V++N ++S +N + + E + M+
Sbjct: 236 SFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVL 295
Query: 192 EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL-ALDCTPLIGNVIMSMYAQFNFIE 250
EG PD F+ +L ++L+ RTG LH A+K +LD +G+ ++ MY +
Sbjct: 296 EGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVL 355
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
RVF + D+ + WN +I +S + ++ L F M + + T A ++ +C
Sbjct: 356 SGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPAC 415
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+F + IH F+ + D V N L++MY++ G I A ++F KM R+L++WN
Sbjct: 416 VRSGAFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWN 475
Query: 371 TMIAAFGNHGLGERAIEIFEQMK------AEG-----VKPDSVTFTGLLIACNHSGMVRK 419
TMI + E A+ + +M+ ++G +KP+S+T +L +C + K
Sbjct: 476 TMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAK 535
Query: 420 GDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSAC 479
G ++ +A ++ S L+DM + G L + ++ N + ++ A
Sbjct: 536 GK-EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKN-VITWNVIIMAY 593
Query: 480 RVHGN 484
+HGN
Sbjct: 594 GMHGN 598
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 180/374 (48%), Gaps = 21/374 (5%)
Query: 93 VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF-VSNSLITMYMKCGQCSDA 151
+ P+ + F + L A A L+ + G+QIH + GY S V+N+L+ +Y KCG
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 152 LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
V+ N VS+N+LIS + E E F+ ML E P F+ V ++ +NL
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 212 ---DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWN 268
+ G +H ++ + I N +++MY + + + +D+++WN
Sbjct: 213 PMPEGLMMGKQVHAYGLRKG-ELNSFIINTLVAMYGKLGKLASSKVLLGSFGGRDLVTWN 271
Query: 269 TLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
T++++ + ++ + +EM+ E + PD+FT +S+L +C+ GK++HA+ +
Sbjct: 272 TVLSSLCQNEQLLEALEYLREMVLE-GVEPDEFTISSVLPACSHLEMLRTGKELHAYALK 330
Query: 329 TRQYWDVG-VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIE 387
+ V +ALV+MY C + +VF M R + WN MIA + + + A+
Sbjct: 331 NGSLDENSFVGSALVDMYCNCKQVLSGRRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALL 390
Query: 388 IFEQM-KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIG----HF-- 440
+F M ++ G+ +S T G++ AC SG F+ EA +G G F
Sbjct: 391 LFIGMEESAGLLANSTTMAGVVPACVRSGA-------FSRKEAIHGFVVKRGLDRDRFVQ 443
Query: 441 SCLIDMLGRAGRLS 454
+ L+DM R G++
Sbjct: 444 NTLMDMYSRLGKID 457
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 107/207 (51%), Gaps = 8/207 (3%)
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD-VGVHNALVNMYAKCGSIGYA 354
I+PD++ F ++L + GKQIHA +++ D V V N LVN+Y KCG G
Sbjct: 93 IKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAV 152
Query: 355 HKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+KVF ++S RN +SWN++I++ + E A+E F M E V+P S T ++ AC++
Sbjct: 153 YKVFDRISERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNL 212
Query: 415 GMVRKGDLYFNSMEAAYGIAP---NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVV 471
M L AYG+ N + L+ M G+ G+L+ + + F D V
Sbjct: 213 PMPE--GLMMGKQVHAYGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSFGG-RDLVT 269
Query: 472 LGSLLSA-CRVHGNMAIGERLAKLLLE 497
++LS+ C+ + E L +++LE
Sbjct: 270 WNTVLSSLCQNEQLLEALEYLREMVLE 296
>AT1G56570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21195804-21197721 FORWARD
LENGTH=611
Length = 611
Score = 329 bits (844), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 168/519 (32%), Positives = 291/519 (56%), Gaps = 8/519 (1%)
Query: 31 QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY---DQCGEHWMALHL 87
+ H ++ L+ Y + G V AR +FD M +R+ V+W+AMI+GY + W H
Sbjct: 42 KKHHILATNLIVSYFEKGLVEEARSLFDEMPDRDVVAWTAMITGYASSNYNARAWECFHE 101
Query: 88 FSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ 147
+ PNEF +S L +C +++ L G +HG+ ++ G +V N+++ MY C
Sbjct: 102 MVKQGTSPNEFTLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSV 161
Query: 148 CSDALSVYANSVGT-NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLG 206
+A + + N V++ LI+GF + G +++K ML E + +
Sbjct: 162 TMEAACLIFRDIKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTPYCITIAVR 221
Query: 207 FSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVIS 266
S ++D TG +H +K + N I+ +Y + ++ E F ++DKD+I+
Sbjct: 222 ASASIDSVTTGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLIT 281
Query: 267 WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
WNTLI+ D ++ L F+ ++ + P+ +TF S++A+C A+ G+Q+H +
Sbjct: 282 WNTLISELER-SDSSEALLMFQRFESQGFV-PNCYTFTSLVAACANIAALNCGQQLHGRI 339
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM-SYRNLISWNTMIAAFGNHGLGERA 385
FR +V + NAL++MYAKCG+I + +VF ++ RNL+SW +M+ +G+HG G A
Sbjct: 340 FRRGFNKNVELANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEA 399
Query: 386 IEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLID 445
+E+F++M + G++PD + F +L AC H+G+V KG YFN ME+ YGI P+ ++C++D
Sbjct: 400 VELFDKMVSSGIRPDRIVFMAVLSACRHAGLVEKGLKYFNVMESEYGINPDRDIYNCVVD 459
Query: 446 MLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERL-AKLLLEVPPVTTS 504
+LGRAG++ E E + + D G++L AC+ H + + RL A+ ++E+ P
Sbjct: 460 LLGRAGKIGEAYELVERMPFKPDESTWGAILGACKAHKHNGLISRLAARKVMELKPKMVG 519
Query: 505 PYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
YV+LS +YA++G W + RKM++ G +KE G +W+
Sbjct: 520 TYVMLSYIYAAEGKWVDFARVRKMMRMMGNKKEAGMSWI 558
Score = 155 bits (393), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 200/390 (51%), Gaps = 21/390 (5%)
Query: 5 TIGTLLQRCS--KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLAR-KVFDG 59
T+ ++L+ C K + +G +H V+K+G++ ++V N ++NMY C + A +F
Sbjct: 113 TLSSVLKSCRNMKVLAYGALVHGVVVKLGMEGSLYVDNAMMNMYATCSVTMEAACLIFRD 172
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM-----KVLPNEFVFASTLSACASLRALV 114
+ +N V+W+ +I+G+ G+ L ++ QM +V P + + A AS+ ++
Sbjct: 173 IKVKNDVTWTTLITGFTHLGDGIGGLKMYKQMLLENAEVTP--YCITIAVRASASIDSVT 230
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
G+QIH ++ G+ S V NS++ +Y +CG S+A + + +++N LIS +
Sbjct: 231 TGKQIHASVIKRGFQSNLPVMNSILDLYCRCGYLSEAKHYFHEMEDKDLITWNTLISE-L 289
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
E + + +F+ +GFVP+ ++F L+ N+ G LH + + +
Sbjct: 290 ERSDSSEALLMFQRFESQGFVPNCYTFTSLVAACANIAALNCGQQLHGRIFRRGFNKNVE 349
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQD-KDVISWNTLINAFSHFDDQGKSFLFFKEMMNE 293
+ N ++ MYA+ I + RVF I D ++++SW +++ + ++ F +M++
Sbjct: 350 LANALIDMYAKCGNIPDSQRVFGEIVDRRNLVSWTSMMIGYGSHGYGAEAVELFDKMVSS 409
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNMYAKCGS 350
IRPD F ++L++C HA + K + F +Y D ++N +V++ + G
Sbjct: 410 -GIRPDRIVFMAVLSACR-HAGLVE-KGLKYFNVMESEYGINPDRDIYNCVVDLLGRAGK 466
Query: 351 IGYAHKVFSKMSYR-NLISWNTMIAAFGNH 379
IG A+++ +M ++ + +W ++ A H
Sbjct: 467 IGEAYELVERMPFKPDESTWGAILGACKAH 496
>AT3G12770.1 | Symbols: MEF22 | mitochondrial editing factor 22 |
chr3:4057027-4059193 REVERSE LENGTH=694
Length = 694
Score = 328 bits (841), Expect = 5e-90, Method: Compositional matrix adjust.
Identities = 180/529 (34%), Positives = 289/529 (54%), Gaps = 7/529 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +L +GLQ F+ +L++ G + AR+VFD + W+A+I GY +
Sbjct: 40 IHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRNNH 99
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL ++S M +V P+ F F L AC+ L L G+ +H R G+ + FV N
Sbjct: 100 FQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNG 159
Query: 138 LITMYMKCGQCSDALSVYANSVGTNS--VSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
LI +Y KC + A +V+ VS+ A++S + +N EP + E+F M +
Sbjct: 160 LIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVK 219
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD + V +L T L D + G S+H VK+ L+ P + + +MYA+ + +
Sbjct: 220 PDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKIL 279
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F ++ ++I WN +I+ ++ ++ F EM+N+ +RPD + S +++C S
Sbjct: 280 FDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINK-DVRPDTISITSAISACAQVGS 338
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
+ ++ ++ R+ DV + +AL++M+AKCGS+ A VF + R+++ W+ MI
Sbjct: 339 LEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVG 398
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+G HG AI ++ M+ GV P+ VTF GLL+ACNHSGMVR+G +FN M A + I P
Sbjct: 399 YGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMVREGWWFFNRM-ADHKINP 457
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
H++C+ID+LGRAG L + E I V G+LLSAC+ H ++ +GE A+ L
Sbjct: 458 QQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQL 517
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ P T YV LSNLYA+ +W+ V R +K GL K+ G +W++
Sbjct: 518 FSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKDVGCSWVE 566
Score = 132 bits (333), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/396 (24%), Positives = 176/396 (44%), Gaps = 25/396 (6%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV 159
F ++L A+ +A Q +QIH L G F+ LI G + A V+ +
Sbjct: 23 FYASLIDSATHKA--QLKQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLP 80
Query: 160 GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMS 219
+NA+I G+ N+ + ++ M PD F+F LL + L + G
Sbjct: 81 RPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRF 140
Query: 220 LHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR--LIQDKDVISWNTLINAFSHF 277
+H Q +L D + N ++++YA+ + VF + ++ ++SW +++A++
Sbjct: 141 VHAQVFRLGFDADVFVQNGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQN 200
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
+ ++ F + M + ++PD S+L + T G+ IHA + + + +
Sbjct: 201 GEPMEALEIFSQ-MRKMDVKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDL 259
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
+L MYAKCG + A +F KM NLI WN MI+ + +G AI++F +M + V
Sbjct: 260 LISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDV 319
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGH---------FSCLIDMLG 448
+PD+++ T + AC G S+E A + +G S LIDM
Sbjct: 320 RPDTISITSAISACAQVG----------SLEQARSMYEYVGRSDYRDDVFISSALIDMFA 369
Query: 449 RAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
+ G + ++ D VV +++ +HG
Sbjct: 370 KCGSVEGARLVFDRTLD-RDVVVWSAMIVGYGLHGR 404
>AT3G47840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17651912-17654032 FORWARD
LENGTH=706
Length = 706
Score = 328 bits (840), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 185/548 (33%), Positives = 296/548 (54%), Gaps = 12/548 (2%)
Query: 6 IGTLLQRC--SKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
+ +L+ C S + +G LHA +K L S V+V + LL+MY + G++ + +VF M
Sbjct: 111 LSVVLKACGQSSNIAYGESLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMP 170
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQ 118
RN V+W+A+I+G G + L FS+M + L + + FA L ACA LR + G+
Sbjct: 171 FRNAVTWTAIITGLVHAGRYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKA 230
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
IH + G+ + V+NSL TMY +CG+ D L ++ N + VS+ +LI + +
Sbjct: 231 IHTHVIVRGFVTTLCVANSLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQ 290
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
K E F M P+ +F + +L G LHC + L L+ + + N
Sbjct: 291 EVKAVETFIKMRNSQVPPNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNS 350
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--FDDQGKSFLFFKEMMNECSI 296
+M MY+ + +F+ ++ +D+ISW+T+I + F ++G F +F M +
Sbjct: 351 MMKMYSTCGNLVSASVLFQGMRCRDIISWSTIIGGYCQAGFGEEG--FKYF-SWMRQSGT 407
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
+P DF AS+L+ A G+Q+HA + V ++L+NMY+KCGSI A
Sbjct: 408 KPTDFALASLLSVSGNMAVIEGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASM 467
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
+F + +++S MI + HG + AI++FE+ G +PDSVTF +L AC HSG
Sbjct: 468 IFGETDRDDIVSLTAMINGYAEHGKSKEAIDLFEKSLKVGFRPDSVTFISVLTACTHSGQ 527
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
+ G YFN M+ Y + P H+ C++D+L RAGRLS+ E+ IN+ D VV +LL
Sbjct: 528 LDLGFHYFNMMQETYNMRPAKEHYGCMVDLLCRAGRLSDAEKMINEMSWKKDDVVWTTLL 587
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
AC+ G++ G R A+ +LE+ P + V L+N+Y+S G E + RK +K G+ K
Sbjct: 588 IACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIK 647
Query: 537 EPGYAWLK 544
EPG++ +K
Sbjct: 648 EPGWSSIK 655
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/487 (25%), Positives = 235/487 (48%), Gaps = 12/487 (2%)
Query: 7 GTLLQRCSKTMTF---GLHAAVLKIGLQSHV-FVSNQLLNMYVKCGRVVLARKVFDGMSE 62
GT+ + C+ +++ + +++I Q V F N L + G + AR+VFD M
Sbjct: 9 GTIQRFCTTSISLLQKPVEENIVRISNQVMVKFDPNSHLRSLINAGNLRAARQVFDKMPH 68
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQMKVL-----PNEFVFASTLSACASLRALVQGQ 117
+ VSW+++I Y AL LFS M+V+ P+ V + L AC + G+
Sbjct: 69 GDIVSWTSIIKRYVTANNSDEALILFSAMRVVDHAVSPDTSVLSVVLKACGQSSNIAYGE 128
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
+H ++++ S +V +SL+ MY + G+ + V++ N+V++ A+I+G V
Sbjct: 129 SLHAYAVKTSLLSSVYVGSSLLDMYKRVGKIDKSCRVFSEMPFRNAVTWTAIITGLVHAG 188
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
++G F M + + D ++F L L + G ++H + T + N
Sbjct: 189 RYKEGLTYFSEMSRSEELSDTYTFAIALKACAGLRQVKYGKAIHTHVIVRGFVTTLCVAN 248
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
+ +MY + +++ + +F + ++DV+SW +LI A+ + K+ F +M N +
Sbjct: 249 SLATMYTECGEMQDGLCLFENMSERDVVSWTSLIVAYKRIGQEVKAVETFIKMRNS-QVP 307
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
P++ TFAS+ ++C + + G+Q+H + + V N+++ MY+ CG++ A +
Sbjct: 308 PNEQTFASMFSACASLSRLVWGEQLHCNVLSLGLNDSLSVSNSMMKMYSTCGNLVSASVL 367
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
F M R++ISW+T+I + G GE + F M+ G KP LL + ++
Sbjct: 368 FQGMRCRDIISWSTIIGGYCQAGFGEEGFKYFSWMRQSGTKPTDFALASLLSVSGNMAVI 427
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
+G +++ +G+ N S LI+M + G + E + +D V L ++++
Sbjct: 428 -EGGRQVHALALCFGLEQNSTVRSSLINMYSKCGSIKEASMIFGETDR-DDIVSLTAMIN 485
Query: 478 ACRVHGN 484
HG
Sbjct: 486 GYAEHGK 492
>AT5G09950.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:3102877-3105864 REVERSE
LENGTH=995
Length = 995
Score = 324 bits (831), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 186/533 (34%), Positives = 312/533 (58%), Gaps = 12/533 (2%)
Query: 21 LHAAVLKIGLQSH-VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+H V+ GL V + N L+NMY KCG + AR+VF M+++++VSW++MI+G DQ G
Sbjct: 335 VHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNG 394
Query: 80 EHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
A+ + M+ +LP F S+LS+CASL+ GQQIHG SL+ G VSN
Sbjct: 395 CFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSN 454
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE--PEKGFEVFKLMLQEGF 194
+L+T+Y + G ++ ++++ + VS+N++I + PE F + G
Sbjct: 455 ALMTLYAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE-AVVCFLNAQRAGQ 513
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
+R +F +L ++L G +H A+K + N +++ Y + ++ +
Sbjct: 514 KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEK 573
Query: 255 VF-RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+F R+ + +D ++WN++I+ + H + K+ M+ + R D F +A++L++
Sbjct: 574 IFSRMAERRDNVTWNSMISGYIHNELLAKALDLVWFML-QTGQRLDSFMYATVLSAFASV 632
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
A+ G ++HA R DV V +ALV+MY+KCG + YA + F+ M RN SWN+MI
Sbjct: 633 ATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMI 692
Query: 374 AAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG 432
+ + HG GE A+++FE MK +G PD VTF G+L AC+H+G++ +G +F SM +YG
Sbjct: 693 SGYARHGQGEEALKLFETMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYG 752
Query: 433 IAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA-CRVHGNMA-IGER 490
+AP I HFSC+ D+LGRAG L ++E++I K + ++ ++L A CR +G A +G++
Sbjct: 753 LAPRIEHFSCMADVLGRAGELDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKK 812
Query: 491 LAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
A++L ++ P YVLL N+YA+ G W ++ ARK +K + ++KE GY+W+
Sbjct: 813 AAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWV 865
Score = 192 bits (489), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 137/473 (28%), Positives = 235/473 (49%), Gaps = 20/473 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
H+ + K L V++ N L+N Y++ G V ARKVFD M RN VSW+ ++SGY + GE
Sbjct: 23 FHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGE 82
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRA--LVQGQQIHGLSLRSGYASISFVS 135
H AL M + N++ F S L AC + + ++ G+QIHGL + YA + VS
Sbjct: 83 HKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVS 142
Query: 136 NSLITMYMKC-GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
N LI+MY KC G AL + + NSVS+N++IS + + + F +F M +G
Sbjct: 143 NVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGS 202
Query: 195 VPDRFSFVGLLGFSTNL--DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
P ++F L+ + +L D R + C K L +G+ ++S +A+ +
Sbjct: 203 RPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYA 262
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
+VF ++ ++ ++ N L+ ++ F +M + + P+ + +L+S
Sbjct: 263 RKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVI--LLSSFPE 320
Query: 313 HA-----SFLHGKQIHAFLFRTRQY-WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL 366
++ G+++H + T + VG+ N LVNMYAKCGSI A +VF M+ ++
Sbjct: 321 YSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDS 380
Query: 367 ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFN 425
+SWN+MI +G A+E ++ M+ + P S T L +C + G ++
Sbjct: 381 VSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGE 440
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
S++ GI N+ + L+ + G L+E + + +D V S++ A
Sbjct: 441 SLK--LGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPE-HDQVSWNSIIGA 490
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 128/492 (26%), Positives = 237/492 (48%), Gaps = 22/492 (4%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY--DQCGEHW 82
+ K GL + +FV + L++ + K G + ARKVF+ M RN V+ + ++ G + GE
Sbjct: 234 IQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEA 293
Query: 83 MAL--HLFSQMKVLPNEFVFASTLSACASLR---ALVQGQQIHGLSLRSGYASISF-VSN 136
L + S + V P +V + SL L +G+++HG + +G + N
Sbjct: 294 TKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGN 353
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
L+ MY KCG +DA V+ +SVS+N++I+G +N + E +K M + +P
Sbjct: 354 GLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILP 413
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
F+ + L +L + G +H +++KL +D + N +M++YA+ ++ E ++F
Sbjct: 414 GSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIF 473
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
+ + D +SWN++I A + + + + + TF+S+L++ + +
Sbjct: 474 SSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFG 533
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS-YRNLISWNTMIAA 375
GKQIH + + NAL+ Y KCG + K+FS+M+ R+ ++WN+MI+
Sbjct: 534 ELGKQIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISG 593
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIA 434
+ ++ L +A+++ M G + DS + +L A + +G +++ S+ A
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
+G S L+DM + GRL + N + + S++S HG GE KL
Sbjct: 654 VVVG--SALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQ---GEEALKL 707
Query: 495 LL------EVPP 500
+ PP
Sbjct: 708 FETMKLDGQTPP 719
Score = 149 bits (377), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 140/496 (28%), Positives = 222/496 (44%), Gaps = 34/496 (6%)
Query: 8 TLLQRCSKTMTFGL------HAAVLKIGLQSHVFVSNQLLNMYVKC-GRVVLARKVFDGM 60
++L+ C + + G+ H + K+ VSN L++MY KC G V A F +
Sbjct: 107 SVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYALCAFGDI 166
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASL-----RA 112
+N+VSW+++IS Y Q G+ A +FS M+ P E+ F S ++ SL R
Sbjct: 167 EVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRL 226
Query: 113 LVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISG 172
L +QI +SG + FV + L++ + K G S A V+ N+V+ N L+ G
Sbjct: 227 L---EQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVG 283
Query: 173 FVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST-NLDD---FRTGMSLHCQAVKLA 228
V E+ ++F M V + L F +L + + G +H +
Sbjct: 284 LVRQKWGEEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTG 343
Query: 229 L-DCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
L D IGN +++MYA+ I + RVF + DKD +SWN++I DQ F+
Sbjct: 344 LVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGL----DQNGCFIEA 399
Query: 288 KEM---MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
E M I P FT S L+SC G+QIH + +V V NAL+ +
Sbjct: 400 VERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTL 459
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG--NHGLGERAIEIFEQMKAEGVKPDSV 402
YA+ G + K+FS M + +SWN++I A L E A+ F + G K + +
Sbjct: 460 YAETGYLNECRKIFSSMPEHDQVSWNSIIGALARSERSLPE-AVVCFLNAQRAGQKLNRI 518
Query: 403 TFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINK 462
TF+ +L A + G + + IA + LI G+ G + E+ ++
Sbjct: 519 TFSSVLSAVSSLSFGELGK-QIHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSR 577
Query: 463 FHHLNDPVVLGSLLSA 478
D V S++S
Sbjct: 578 MAERRDNVTWNSMISG 593
>AT3G03580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:860695-863343 REVERSE
LENGTH=882
Length = 882
Score = 322 bits (826), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 180/527 (34%), Positives = 297/527 (56%), Gaps = 3/527 (0%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
GLH LK G+ S V V+N L+ MY+K R AR+VFD M R++VS++ MI GY +
Sbjct: 228 GLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLE 287
Query: 80 --EHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
E + + L + + P+ +S L AC LR L + I+ L++G+ S V N
Sbjct: 288 MVEESVRMFLENLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI 347
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
LI +Y KCG A V+ + ++VS+N++ISG++++ + + ++FK+M+ D
Sbjct: 348 LIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIMEEQAD 407
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+++ L+ ST L D + G LH +K + + N ++ MYA+ + + +++F
Sbjct: 408 HITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAKCGEVGDSLKIFS 467
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ D ++WNT+I+A F D L M + + PD TF L C A+
Sbjct: 468 SMGTGDTVTWNTVISACVRFGDFATG-LQVTTQMRKSEVVPDMATFLVTLPMCASLAAKR 526
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
GK+IH L R ++ + NAL+ MY+KCG + + +VF +MS R++++W MI A+G
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIYAYG 586
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
+G GE+A+E F M+ G+ PDSV F ++ AC+HSG+V +G F M+ Y I P I
Sbjct: 587 MYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMI 646
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
H++C++D+L R+ ++S+ EE+I D + S+L ACR G+M ER+++ ++E
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDMETAERVSRRIIE 706
Query: 498 VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ P +L SN YA+ W++V+ RK LK + K PGY+W++
Sbjct: 707 LNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIE 753
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 129/475 (27%), Positives = 237/475 (49%), Gaps = 14/475 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE-RNTVSWSAMISGYDQCG 79
+HA V+ +GL S F S +L++ Y + VF +S +N W+++I + + G
Sbjct: 26 IHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLWNSIIRAFSKNG 85
Query: 80 EHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
AL + ++ KV P+++ F S + ACA L G ++ L G+ S FV N
Sbjct: 86 LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGN 145
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+L+ MY + G + A V+ + VS+N+LISG+ + E+ E++ + VP
Sbjct: 146 ALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVP 205
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D F+ +L NL + G LH A+K ++ ++ N +++MY +F + RVF
Sbjct: 206 DSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPTDARRVF 265
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
+ +D +S+NT+I + + +S F E +++ +PD T +S+L +C
Sbjct: 266 DEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENLDQ--FKPDLLTVSSVLRACGHLRDL 323
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
K I+ ++ + + V N L+++YAKCG + A VF+ M ++ +SWN++I+ +
Sbjct: 324 SLAKYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD-LYFNSMEAAYGIAP 435
G A+++F+ M + D +T+ L+ ++ G L+ N +++ GI
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKS--GICI 441
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHL--NDPVVLGSLLSACRVHGNMAIG 488
++ + LIDM + G EV + + F + D V +++SAC G+ A G
Sbjct: 442 DLSVSNALIDMYAKCG---EVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATG 493
Score = 125 bits (314), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 188/399 (47%), Gaps = 10/399 (2%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN-S 158
+ LS+ ++L L ++IH L + G S F S LI Y + + +LSV+ S
Sbjct: 10 ISRALSSSSNLNEL---RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVS 66
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
N +N++I F +N + E + + + PD+++F ++ L D G
Sbjct: 67 PAKNVYLWNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGD 126
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD 278
++ Q + + + +GN ++ MY++ + +VF + +D++SWN+LI+ +S
Sbjct: 127 LVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHG 186
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
++ + E+ N I PD FT +S+L + G+ +H F ++ V V+
Sbjct: 187 YYEEALEIYHELKNSW-IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVN 245
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
N LV MY K A +VF +M R+ +S+NTMI + + E ++ +F + + K
Sbjct: 246 NGLVAMYLKFRRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLE-NLDQFK 304
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSM-EAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
PD +T + +L AC H + +N M +A + + + + LID+ + G +
Sbjct: 305 PDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLESTVRNI--LIDVYAKCGDMITAR 362
Query: 458 EYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
+ N D V S++S G++ +L K+++
Sbjct: 363 DVFNSM-ECKDTVSWNSIISGYIQSGDLMEAMKLFKMMM 400
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
+K + +H +L+ G +S + + N L+ MY KCG + + +VF+ MS R+ V+W+ MI
Sbjct: 524 AKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 74 GYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACA 108
Y GE AL F+ M+ ++P+ VF + + AC+
Sbjct: 584 AYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACS 621
>AT2G22070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr2:9383602-9385962 FORWARD LENGTH=786
Length = 786
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 186/624 (29%), Positives = 307/624 (49%), Gaps = 101/624 (16%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM-------------------- 60
+H V+K GL V++ N L+N+Y K G + ARK+FD M
Sbjct: 36 VHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGD 95
Query: 61 -----------SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA 106
+R++VSW+ MI GY G++ A+ + M + P +F + L++
Sbjct: 96 MDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLAS 155
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC--------------------- 145
A+ R + G+++H ++ G VSNSL+ MY KC
Sbjct: 156 VAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSW 215
Query: 146 ----------GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
GQ A++ + + V++N++ISGF + + ++F ML++ +
Sbjct: 216 NAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLL 275
Query: 196 -PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
PDRF+ +L NL+ G +H V D + ++ N ++SMY++ +E R
Sbjct: 276 SPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARR 335
Query: 255 ---------------------------------VFRLIQDKDVISWNTLINAFSHFDDQG 281
+F ++D+DV++W +I + G
Sbjct: 336 LIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYG 395
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
++ F+ M+ RP+ +T A++L+ + AS HGKQIH ++ + + V V NAL
Sbjct: 396 EAINLFRSMVGGGQ-RPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNAL 454
Query: 342 VNMYAKCGSIGYAHKVFSKMS-YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
+ MYAK G+I A + F + R+ +SW +MI A HG E A+E+FE M EG++PD
Sbjct: 455 ITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD 514
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYI 460
+T+ G+ AC H+G+V +G YF+ M+ I P + H++C++D+ GRAG L E +E+I
Sbjct: 515 HITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFI 574
Query: 461 NKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWN 520
K D V GSLLSACRVH N+ +G+ A+ LL + P + Y L+NLY++ G W
Sbjct: 575 EKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWE 634
Query: 521 EVTSARKMLKGSGLRKEPGYAWLK 544
E RK +K ++KE G++W++
Sbjct: 635 EAAKIRKSMKDGRVKKEQGFSWIE 658
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 139/515 (26%), Positives = 236/515 (45%), Gaps = 110/515 (21%)
Query: 12 RCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD------------- 58
RC +T +H+ ++K+GL+ +V VSN LLNMY KCG ++A+ VFD
Sbjct: 160 RCMETGK-KVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAM 218
Query: 59 ------------------GMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPN 96
M+ER+ V+W++MISG++Q G AL +FS+M + P+
Sbjct: 219 IALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPD 278
Query: 97 EFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC----------- 145
F AS LSACA+L L G+QIH + +G+ V N+LI+MY +C
Sbjct: 279 RFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIE 338
Query: 146 ----------------------GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGF 183
G + A +++ + + V++ A+I G+ ++ +
Sbjct: 339 QRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAI 398
Query: 184 EVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMY 243
+F+ M+ G P+ ++ +L +++L G +H AVK + + N +++MY
Sbjct: 399 NLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMY 458
Query: 244 AQFNFIEEVVRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
A+ I R F LI+ ++D +SW ++I A + ++ F+ M+ E +RPD T
Sbjct: 459 AKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLME-GLRPDHIT 517
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
+ + ++CT HA ++ + RQY+D+ + K+ +S
Sbjct: 518 YVGVFSACT-HAGLVN---------QGRQYFDM---------------MKDVDKIIPTLS 552
Query: 363 YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN-HSGMVRKGD 421
+ + M+ FG GL + A E E+M E PD VT+ LL AC H + D
Sbjct: 553 H-----YACMVDLFGRAGLLQEAQEFIEKMPIE---PDVVTWGSLLSACRVHKNI----D 600
Query: 422 LYFNSMEAAYGIAP-NIGHFSCLIDMLGRAGRLSE 455
L + E + P N G +S L ++ G+ E
Sbjct: 601 LGKVAAERLLLLEPENSGAYSALANLYSACGKWEE 635
>AT2G33680.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:14249608-14251791 FORWARD
LENGTH=727
Length = 727
Score = 321 bits (823), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 170/536 (31%), Positives = 301/536 (56%), Gaps = 6/536 (1%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
S T+ HA V+K+ ++V L+ MY K G V KVF M ERNT +WS M+S
Sbjct: 133 SSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVS 192
Query: 74 GYDQCGEHWMALHLFS-----QMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
GY G A+ +F+ + + +++VF + LS+ A+ + G+QIH +++++G
Sbjct: 193 GYATRGRVEEAIKVFNLFLREKEEGSDSDYVFTAVLSSLAATIYVGLGRQIHCITIKNGL 252
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
+SN+L+TMY KC ++A ++ +S NS++++A+++G+ +N E + ++F
Sbjct: 253 LGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSR 312
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
M G P ++ VG+L +++ G LH +KL + ++ MYA+
Sbjct: 313 MFSAGIKPSEYTIVGVLNACSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGC 372
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+ + + F +Q++DV W +LI+ + D ++ + ++ M I P+D T AS+L
Sbjct: 373 LADARKGFDCLQERDVALWTSLISGYVQNSDNEEALILYRRM-KTAGIIPNDPTMASVLK 431
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
+C+ A+ GKQ+H + +V + +AL MY+KCGS+ + VF + ++++S
Sbjct: 432 ACSSLATLELGKQVHGHTIKHGFGLEVPIGSALSTMYSKCGSLEDGNLVFRRTPNKDVVS 491
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
WN MI+ ++G G+ A+E+FE+M AEG++PD VTF ++ AC+H G V +G YFN M
Sbjct: 492 WNAMISGLSHNGQGDEALELFEEMLAEGMEPDDVTFVNIISACSHKGFVERGWFYFNMMS 551
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIG 488
G+ P + H++C++D+L RAG+L E +E+I + + + LLSAC+ HG +G
Sbjct: 552 DQIGLDPKVDHYACMVDLLSRAGQLKEAKEFIESANIDHGLCLWRILLSACKNHGKCELG 611
Query: 489 ERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ L+ + +S YV LS +Y + G +V K ++ +G+ KE G +W++
Sbjct: 612 VYAGEKLMALGSRESSTYVQLSGIYTALGRMRDVERVWKHMRANGVSKEVGCSWIE 667
Score = 194 bits (492), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 227/447 (50%), Gaps = 16/447 (3%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+H +++ G + + +N L+N Y KCG++ A +F+ + ++ VSW+++I+GY Q G
Sbjct: 35 AVHGQIIRTGASTCIQHANVLVNFYAKCGKLAKAHSIFNAIICKDVVSWNSLITGYSQNG 94
Query: 80 ---EHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLR-SGYASIS 132
+ + LF +M+ +LPN + A A +SL++ G+Q H L ++ S + I
Sbjct: 95 GISSSYTVMQLFREMRAQDILPNAYTLAGIFKAESSLQSSTVGRQAHALVVKMSSFGDI- 153
Query: 133 FVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML-- 190
+V SL+ MY K G D L V+A N+ +++ ++SG+ E+ +VF L L
Sbjct: 154 YVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYTWSTMVSGYATRGRVEEAIKVFNLFLRE 213
Query: 191 -QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
+EG D + F +L G +HC +K L + N +++MY++ +
Sbjct: 214 KEEGSDSD-YVFTAVLSSLAATIYVGLGRQIHCITIKNGLLGFVALSNALVTMYSKCESL 272
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
E ++F D++ I+W+ ++ +S + ++ F M + I+P ++T +L +
Sbjct: 273 NEACKMFDSSGDRNSITWSAMVTGYSQNGESLEAVKLFSRMFS-AGIKPSEYTIVGVLNA 331
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
C+ GKQ+H+FL + + ALV+MYAK G + A K F + R++ W
Sbjct: 332 CSDICYLEEGKQLHSFLLKLGFERHLFATTALVDMYAKAGCLADARKGFDCLQERDVALW 391
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSME 428
++I+ + + E A+ ++ +MK G+ P+ T +L AC+ + G ++ ++++
Sbjct: 392 TSLISGYVQNSDNEEALILYRRMKTAGIIPNDPTMASVLKACSSLATLELGKQVHGHTIK 451
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSE 455
+G+ IG S L M + G L +
Sbjct: 452 HGFGLEVPIG--SALSTMYSKCGSLED 476
Score = 155 bits (392), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 186/375 (49%), Gaps = 9/375 (2%)
Query: 90 QMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCS 149
Q ++ P+ L+ + R LV G+ +HG +R+G ++ +N L+ Y KCG+ +
Sbjct: 7 QTELNPHTSTLLKKLTHHSQQRNLVAGRAVHGQIIRTGASTCIQHANVLVNFYAKCGKLA 66
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEV---FKLMLQEGFVPDRFSFVGLLG 206
A S++ + + VS+N+LI+G+ +N + V F+ M + +P+ ++ G+
Sbjct: 67 KAHSIFNAIICKDVVSWNSLITGYSQNGGISSSYTVMQLFREMRAQDILPNAYTLAGIFK 126
Query: 207 FSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVIS 266
++L G H VK++ + ++ MY + +E+ ++VF + +++ +
Sbjct: 127 AESSLQSSTVGRQAHALVVKMSSFGDIYVDTSLVGMYCKAGLVEDGLKVFAYMPERNTYT 186
Query: 267 WNTLINAFS---HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
W+T+++ ++ ++ K F F E S D+ F ++L+S G+QIH
Sbjct: 187 WSTMVSGYATRGRVEEAIKVFNLFLREKEEGS--DSDYVFTAVLSSLAATIYVGLGRQIH 244
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
+ V + NALV MY+KC S+ A K+F RN I+W+ M+ + +G
Sbjct: 245 CITIKNGLLGFVALSNALVTMYSKCESLNEACKMFDSSGDRNSITWSAMVTGYSQNGESL 304
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL 443
A+++F +M + G+KP T G+L AC+ + +G +S G ++ + L
Sbjct: 305 EAVKLFSRMFSAGIKPSEYTIVGVLNACSDICYLEEGK-QLHSFLLKLGFERHLFATTAL 363
Query: 444 IDMLGRAGRLSEVEE 458
+DM +AG L++ +
Sbjct: 364 VDMYAKAGCLADARK 378
>AT1G03540.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:883782-885611 FORWARD
LENGTH=609
Length = 609
Score = 318 bits (816), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 179/546 (32%), Positives = 298/546 (54%), Gaps = 15/546 (2%)
Query: 8 TLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGR-VVLARKVFDGMSE 62
+LLQ C+K +F HA V+K GL++ V N LL++Y K G + R+VFDG
Sbjct: 66 SLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDGRFV 125
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQI 119
++ +SW++M+SGY EH AL +F +M + NEF +S + AC+ L + G+
Sbjct: 126 KDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLGRCF 185
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEP 179
HG+ + G+ F+S++L +Y + DA V+ + + + A++S F +N
Sbjct: 186 HGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKNDLY 245
Query: 180 EKGFEVFKLMLQ-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
E+ +F M + +G VPD +F +L NL + G +H + + + ++ +
Sbjct: 246 EEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVVESS 305
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
++ MY + + E +VF + K+ +SW+ L+ + + K+ F+EM +
Sbjct: 306 LLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEK----- 360
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D + F ++L +C A+ GK+IH R + +V V +AL+++Y K G I A +V+
Sbjct: 361 DLYCFGTVLKACAGLAAVRLGKEIHGQYVRRGCFGNVIVESALIDLYGKSGCIDSASRVY 420
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
SKMS RN+I+WN M++A +G GE A+ F M +G+KPD ++F +L AC H+GMV
Sbjct: 421 SKMSIRNMITWNAMLSALAQNGRGEEAVSFFNDMVKKGIKPDYISFIAILTACGHTGMVD 480
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
+G YF M +YGI P H+SC+ID+LGRAG E E + + ND + G LL
Sbjct: 481 EGRNYFVLMAKSYGIKPGTEHYSCMIDLLGRAGLFEEAENLLERAECRNDASLWGVLLGP 540
Query: 479 CRVHGNMA-IGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
C + + + + ER+AK ++E+ P YVLLSN+Y + G + + RK++ G+ K
Sbjct: 541 CAANADASRVAERIAKRMMELEPKYHMSYVLLSNMYKAIGRHGDALNIRKLMVRRGVAKT 600
Query: 538 PGYAWL 543
G +W+
Sbjct: 601 VGQSWI 606
Score = 155 bits (391), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/396 (27%), Positives = 187/396 (47%), Gaps = 9/396 (2%)
Query: 89 SQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ- 147
S++ P ++AS L C + + + G Q H ++SG + V NSL+++Y K G
Sbjct: 55 SEIPATPK--LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPG 112
Query: 148 CSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGF 207
+ V+ +++S+ +++SG+V E K EVF M+ G + F+ +
Sbjct: 113 MRETRRVFDGRFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKA 172
Query: 208 STNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISW 267
+ L + R G H + + I + + +Y + RVF + + DVI W
Sbjct: 173 CSELGEVRLGRCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICW 232
Query: 268 NTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF 327
+++AFS D ++ F M + PD TF ++L +C GK+IH L
Sbjct: 233 TAVLSAFSKNDLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLI 292
Query: 328 RTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIE 387
+V V ++L++MY KCGS+ A +VF+ MS +N +SW+ ++ + +G E+AIE
Sbjct: 293 TNGIGSNVVVESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIE 352
Query: 388 IFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDML 447
IF +M+ + D F +L AC VR G + G N+ S LID+
Sbjct: 353 IFREME----EKDLYCFGTVLKACAGLAAVRLGK-EIHGQYVRRGCFGNVIVESALIDLY 407
Query: 448 GRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
G++G + +K + + + ++LSA +G
Sbjct: 408 GKSGCIDSASRVYSKM-SIRNMITWNAMLSALAQNG 442
>AT2G40720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:16987269-16989851 FORWARD
LENGTH=860
Length = 860
Score = 318 bits (814), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 180/544 (33%), Positives = 291/544 (53%), Gaps = 10/544 (1%)
Query: 10 LQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT 65
L CS++ G +H V+K+GL + +V LL+MY KCG V A VF + ++
Sbjct: 279 LGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRL 338
Query: 66 VSWSAMISGYDQCGEHWMALHLFS---QMKVLPNEFVFASTLSACASLRALVQGQQIHGL 122
W+AM++ Y + + AL LF Q VLP+ F ++ +S C+ L G+ +H
Sbjct: 339 EIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAE 398
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKG 182
+ S S + ++L+T+Y KCG DA V+ + + V++ +LISG +N + ++
Sbjct: 399 LFKRPIQSTSTIESALLTLYSKCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEA 458
Query: 183 FEVFKLMLQE--GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+VF M + PD + L+ R G+ +H +K L +G+ ++
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
+Y++ E ++VF + +++++WN++I+ +S + S F M+++ I PD
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQ-GIFPDS 577
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+ S+L + + AS L GK +H + R D + NAL++MY KCG YA +F K
Sbjct: 578 VSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDMYVKCGFSKYAENIFKK 637
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
M +++LI+WN MI +G+HG A+ +F++MK G PD VTF L+ ACNHSG V +G
Sbjct: 638 MQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTFLSLISACNHSGFVEEG 697
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACR 480
F M+ YGI PN+ H++ ++D+LGRAG L E +I D + LLSA R
Sbjct: 698 KNIFEFMKQDYGIEPNMEHYANMVDLLGRAGLLEEAYSFIKAMPIEADSSIWLCLLSASR 757
Query: 481 VHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGY 540
H N+ +G A+ LL + P S YV L NLY G+ NE ++K GL K+PG
Sbjct: 758 THHNVELGILSAEKLLRMEPERGSTYVQLINLYMEAGLKNEAAKLLGLMKEKGLHKQPGC 817
Query: 541 AWLK 544
+W++
Sbjct: 818 SWIE 821
Score = 199 bits (506), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 138/467 (29%), Positives = 235/467 (50%), Gaps = 23/467 (4%)
Query: 5 TIGTLLQRCS--KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +LL+ CS +++G +H +V+ +G + F++ L+NMYVKCG + A +VFDG
Sbjct: 62 TFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDPFIATSLVNMYVKCGFLDYAVQVFDGW 121
Query: 61 SE-------RNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEF---VFASTLSAC 107
S+ R+ W++MI GY + + F +M V P+ F + S +
Sbjct: 122 SQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGCFRRMLVFGVRPDAFSLSIVVSVMCKE 181
Query: 108 ASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN-SVGTNSVSY 166
+ R +G+QIHG LR+ + SF+ +LI MY K G DA V+ +N V +
Sbjct: 182 GNFRR-EEGKQIHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLW 240
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK 226
N +I GF + E +++ L SF G LG + ++ G +HC VK
Sbjct: 241 NVMIVGFGGSGICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVK 300
Query: 227 LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLF 286
+ L P + ++SMY++ + E VF + DK + WN ++ A++ +D G S L
Sbjct: 301 MGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAE-NDYGYSALD 359
Query: 287 FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYA 346
M + S+ PD FT +++++ C+ + +GK +HA LF+ + +AL+ +Y+
Sbjct: 360 LFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYS 419
Query: 347 KCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK--AEGVKPDSVTF 404
KCG A+ VF M +++++W ++I+ +G + A+++F MK + +KPDS
Sbjct: 420 KCGCDPDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIM 479
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
T + AC +R G SM G+ N+ S LID+ + G
Sbjct: 480 TSVTNACAGLEALRFGLQVHGSM-IKTGLVLNVFVGSSLIDLYSKCG 525
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/450 (27%), Positives = 229/450 (50%), Gaps = 6/450 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER-NTVSWSAMISGYDQCG 79
+H +L+ L + F+ L++MY K G + A +VF + ++ N V W+ MI G+ G
Sbjct: 192 IHGFMLRNSLDTDSFLKTALIDMYFKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSG 251
Query: 80 EHWMALHLFSQMKVLPNEFV---FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+L L+ K + V F L AC+ G+QIH ++ G + +V
Sbjct: 252 ICESSLDLYMLAKNNSVKLVSTSFTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCT 311
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
SL++MY KCG +A +V++ V +NA+++ + EN ++F M Q+ +P
Sbjct: 312 SLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLP 371
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D F+ ++ + L + G S+H + K + T I + ++++Y++ + VF
Sbjct: 372 DSFTLSNVISCCSVLGLYNYGKSVHAELFKRPIQSTSTIESALLTLYSKCGCDPDAYLVF 431
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM-NECSIRPDDFTFASILASCTWHAS 315
+ +++KD+++W +LI+ ++ F +M ++ S++PD S+ +C +
Sbjct: 432 KSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEA 491
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G Q+H + +T +V V ++L+++Y+KCG A KVF+ MS N+++WN+MI+
Sbjct: 492 LRFGLQVHGSMIKTGLVLNVFVGSSLIDLYSKCGLPEMALKVFTSMSTENMVAWNSMISC 551
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ + L E +I++F M ++G+ PDSV+ T +L+A + + + KG + GI
Sbjct: 552 YSRNNLPELSIDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGK-SLHGYTLRLGIPS 610
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHH 465
+ + LIDM + G E K H
Sbjct: 611 DTHLKNALIDMYVKCGFSKYAENIFKKMQH 640
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 107/358 (29%), Positives = 177/358 (49%), Gaps = 15/358 (4%)
Query: 77 QCGEHWMALHLFSQ----MKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
Q GE+ ALHL+S+ + F F S L AC++L L G+ IHG + G+
Sbjct: 36 QKGEYLQALHLYSKHDGSSPFWTSVFTFPSLLKACSALTNLSYGKTIHGSVVVLGWRYDP 95
Query: 133 FVSNSLITMYMKCG------QCSDALSVYANSVGTNSVS-YNALISGFVENHEPEKGFEV 185
F++ SL+ MY+KCG Q D S + V V+ +N++I G+ + ++G
Sbjct: 96 FIATSLVNMYVKCGFLDYAVQVFDGWSQSQSGVSARDVTVWNSMIDGYFKFRRFKEGVGC 155
Query: 186 FKLMLQEGFVPDRFSFVGLLGFSTNLDDFR--TGMSLHCQAVKLALDCTPLIGNVIMSMY 243
F+ ML G PD FS ++ +FR G +H ++ +LD + ++ MY
Sbjct: 156 FRRMLVFGVRPDAFSLSIVVSVMCKEGNFRREEGKQIHGFMLRNSLDTDSFLKTALIDMY 215
Query: 244 AQFNFIEEVVRVFRLIQDK-DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
+F + RVF I+DK +V+ WN +I F S + N S++ +
Sbjct: 216 FKFGLSIDAWRVFVEIEDKSNVVLWNVMIVGFGGSGICESSLDLYMLAKNN-SVKLVSTS 274
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
F L +C+ + G+QIH + + + D V +L++MY+KCG +G A VFS +
Sbjct: 275 FTGALGACSQSENSGFGRQIHCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVV 334
Query: 363 YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+ L WN M+AA+ + G A+++F M+ + V PDS T + ++ C+ G+ G
Sbjct: 335 DKRLEIWNAMVAAYAENDYGYSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYG 392
>AT3G49710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18437845-18440010 FORWARD
LENGTH=721
Length = 721
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 178/563 (31%), Positives = 304/563 (53%), Gaps = 41/563 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGR------------------------------- 49
LHA +K + S ++SN +N+Y KCGR
Sbjct: 30 LHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAKDSK 89
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNE---FVFASTLSA 106
+ +AR++FD + + +TVS++ +ISGY E + A+ LF +M+ L E F + ++A
Sbjct: 90 IHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLSGLIAA 149
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV-YANSVGTNSVS 165
C L++ Q+H S+ G+ S S V+N+ +T Y K G +A+SV Y + VS
Sbjct: 150 CCDRVDLIK--QLHCFSVSGGFDSYSSVNNAFVTYYSKGGLLREAVSVFYGMDELRDEVS 207
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+N++I + ++ E K ++K M+ +GF D F+ +L T+LD G H + +
Sbjct: 208 WNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLI 267
Query: 226 KLALDCTPLIGNVIMSMYAQF---NFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGK 282
K +G+ ++ Y++ + + + +VF+ I D++ WNT+I+ +S ++ +
Sbjct: 268 KAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQEILSPDLVVWNTMISGYSMNEELSE 327
Query: 283 SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD-VGVHNAL 341
+ M RPDD +F + ++C+ +S KQIH ++ + + V+NAL
Sbjct: 328 EAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPSNRISVNNAL 387
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
+++Y K G++ A VF +M N +S+N MI + HG G A+ ++++M G+ P+
Sbjct: 388 ISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRMLDSGIAPNK 447
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
+TF +L AC H G V +G YFN+M+ + I P H+SC+ID+LGRAG+L E E +I+
Sbjct: 448 ITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGKLEEAERFID 507
Query: 462 KFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNE 521
+ V +LL ACR H NMA+ ER A L+ + P+ +PYV+L+N+YA W E
Sbjct: 508 AMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANMYADARKWEE 567
Query: 522 VTSARKMLKGSGLRKEPGYAWLK 544
+ S RK ++G +RK+PG +W++
Sbjct: 568 MASVRKSMRGKRIRKKPGCSWIE 590
Score = 145 bits (366), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 101/360 (28%), Positives = 171/360 (47%), Gaps = 40/360 (11%)
Query: 91 MKVLPNEF-VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCS 149
M P +F F L + R L G+ +H L ++S AS +++SN + +Y KCG+ S
Sbjct: 1 MNQTPWKFKTFRDLLLKSVAERDLFTGKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLS 60
Query: 150 DALSVYANSVGTN-------------------------------SVSYNALISGFVENHE 178
A + + ++ N +VSYN LISG+ + E
Sbjct: 61 YARAAFYSTEEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARE 120
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+FK M + GF D F+ GL+ + D LHC +V D + N
Sbjct: 121 TFAAMVLFKRMRKLGFEVDGFTLSGLIAACCDRVDLIK--QLHCFSVSGGFDSYSSVNNA 178
Query: 239 IMSMYAQFNFIEEVVRVFRLIQD-KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
++ Y++ + E V VF + + +D +SWN++I A+ + K+ +KEM+ + +
Sbjct: 179 FVTYYSKGGLLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFK-GFK 237
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG---YA 354
D FT AS+L + T + G+Q H L + + + V + L++ Y+KCG +
Sbjct: 238 IDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDS 297
Query: 355 HKVFSKMSYRNLISWNTMIAAFG-NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
KVF ++ +L+ WNTMI+ + N L E A++ F QM+ G +PD +F + AC++
Sbjct: 298 EKVFQEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSN 357
>AT3G02330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:473881-476592 REVERSE
LENGTH=903
Length = 903
Score = 317 bits (813), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 182/548 (33%), Positives = 293/548 (53%), Gaps = 26/548 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LHA LK + V L+MY KC + A+ +FD N S++AMI+GY Q
Sbjct: 303 LHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEEH 362
Query: 81 HWMALHLFSQMKVLP---NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ AL LF ++ +E + ACA ++ L +G QI+GL+++S + V+N+
Sbjct: 363 GFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANA 422
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
I MY KC ++A V+ ++VS+NA+I+ +N + + +F ML+ PD
Sbjct: 423 AIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPD 482
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF- 256
F+F +L T GM +H VK + +G ++ MY++ IEE ++
Sbjct: 483 EFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHS 541
Query: 257 RLIQDKDV-------------------ISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
R Q +V +SWN++I+ + + + + F MM E I
Sbjct: 542 RFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMM-EMGIT 600
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
PD FT+A++L +C AS GKQIHA + + DV + + LV+MY+KCG + + +
Sbjct: 601 PDKFTYATVLDTCANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLM 660
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
F K R+ ++WN MI + +HG GE AI++FE+M E +KP+ VTF +L AC H G++
Sbjct: 661 FEKSLRRDFVTWNAMICGYAHHGKGEEAIQLFERMILENIKPNHVTFISILRACAHMGLI 720
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
KG YF M+ YG+ P + H+S ++D+LG++G++ E I + D V+ +LL
Sbjct: 721 DKGLEYFYMMKRDYGLDPQLPHYSNMVDILGKSGKVKRALELIREMPFEADDVIWRTLLG 780
Query: 478 ACRVH-GNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
C +H N+ + E LL + P +S Y LLSN+YA GMW +V+ R+ ++G L+K
Sbjct: 781 VCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKK 840
Query: 537 EPGYAWLK 544
EPG +W++
Sbjct: 841 EPGCSWVE 848
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/478 (28%), Positives = 235/478 (49%), Gaps = 30/478 (6%)
Query: 5 TIGTLLQRCS----KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +L+ CS ++ +H V+++G + V ++ LL+MY K R V + +VF G+
Sbjct: 182 TFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGI 241
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLP---NEFVFASTLSACASLRALVQGQ 117
E+N+VSWSA+I+G Q +AL F +M+ + ++ ++AS L +CA+L L G
Sbjct: 242 PEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGG 301
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
Q+H +L+S +A+ V + + MY KC DA ++ NS N SYNA+I+G+ +
Sbjct: 302 QLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAMITGYSQEE 361
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
K +F ++ G D S G+ + G+ ++ A+K +L + N
Sbjct: 362 HGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN 421
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
+ MY + + E RVF ++ +D +SWN +I A + +G LF M I
Sbjct: 422 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQ-NGKGYETLFLFVSMLRSRIE 480
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
PD+FTF SIL +CT S +G +IH+ + ++ + V +L++MY+KCG I A K+
Sbjct: 481 PDEFTFGSILKACT-GGSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKI 539
Query: 358 FS----------------KMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
S KM + L +SWN++I+ + E A +F +M G+
Sbjct: 540 HSRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGI 599
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
PD T+ +L C + G ++ + ++ S L+DM + G L +
Sbjct: 600 TPDKFTYATVLDTCANLASAGLGK-QIHAQVIKKELQSDVYICSTLVDMYSKCGDLHD 656
Score = 176 bits (447), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 131/493 (26%), Positives = 227/493 (46%), Gaps = 41/493 (8%)
Query: 9 LLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
+ + C+K L HA ++ G + FV N LL +Y V A VFD M R+
Sbjct: 54 VFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRD 113
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMKV-------------LPN--------------- 96
VSW+ MI+GY + + + A F+ M V L N
Sbjct: 114 VVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGR 173
Query: 97 ---EF---VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
EF FA L C+ L G QIHG+ +R G + +++L+ MY K + +
Sbjct: 174 EGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVE 233
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
+L V+ NSVS++A+I+G V+N+ + FK M + + + +L
Sbjct: 234 SLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAA 293
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
L + R G LH A+K ++ + MYA+ + +++ +F ++ + S+N +
Sbjct: 294 LSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSYNAM 353
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
I +S + K+ L F +M+ + D+ + + + +C G QI+ ++
Sbjct: 354 ITGYSQEEHGFKALLLFHRLMSS-GLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSS 412
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
DV V NA ++MY KC ++ A +VF +M R+ +SWN +IAA +G G + +F
Sbjct: 413 LSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFV 472
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
M ++PD TF +L AC + +++ + +++ G+A N LIDM +
Sbjct: 473 SMLRSRIEPDEFTFGSILKACTGGSLGYGMEIHSSIVKS--GMASNSSVGCSLIDMYSKC 530
Query: 451 GRLSEVEEYINKF 463
G + E E+ ++F
Sbjct: 531 GMIEEAEKIHSRF 543
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 186/416 (44%), Gaps = 34/416 (8%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY---- 155
F+ CA AL G+Q H + SG+ +FV N L+ +Y A V+
Sbjct: 51 FSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMP 110
Query: 156 ----------------------ANSVGT-----NSVSYNALISGFVENHEPEKGFEVFKL 188
ANS + VS+N+++SG+++N E K EVF
Sbjct: 111 LRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVD 170
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
M +EG D +F +L + L+D GM +H V++ D + + ++ MYA+
Sbjct: 171 MGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKR 230
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
E +RVF+ I +K+ +SW+ +I + + FFKE M + + +AS+L
Sbjct: 231 FVESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKE-MQKVNAGVSQSIYASVLR 289
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
SC + G Q+HA ++ D V A ++MYAKC ++ A +F N S
Sbjct: 290 SCAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQS 349
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
+N MI + G +A+ +F ++ + G+ D ++ +G+ AC + +G L +
Sbjct: 350 YNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEG-LQIYGLA 408
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
++ ++ + IDM G+ L+E ++ D V ++++A +G
Sbjct: 409 IKSSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRR-RDAVSWNAIIAAHEQNGK 463
>AT3G49170.1 | Symbols: EMB2261 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr3:18226954-18229600
REVERSE LENGTH=850
Length = 850
Score = 317 bits (811), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 189/530 (35%), Positives = 293/530 (55%), Gaps = 13/530 (2%)
Query: 25 VLKIG-LQSHVFVSNQLLNMYVKCGRVVL-ARKVFDGMSERNTVSWSAMISGYDQCGEHW 82
++K G +S V V L++M+VK A KVFD MSE N V+W+ MI+ Q G
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 83 MALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLI 139
A+ F M + ++F +S SACA L L G+Q+H ++RSG + V SL+
Sbjct: 252 EAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGL--VDDVECSLV 309
Query: 140 TMYMKC---GQCSDALSVYANSVGTNSVSYNALISGFVEN-HEPEKGFEVFKLMLQEGFV 195
MY KC G D V+ + +S+ ALI+G+++N + + +F M+ +G V
Sbjct: 310 DMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEMITQGHV 369
Query: 196 -PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
P+ F+F NL D R G + QA K L + N ++SM+ + + +E+ R
Sbjct: 370 EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQR 429
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
F + +K+++S+NT ++ + ++F E+ E + FTFAS+L+
Sbjct: 430 AFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEI-TERELGVSAFTFASLLSGVANVG 488
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
S G+QIH+ + + + V NAL++MY+KCGSI A +VF+ M RN+ISW +MI
Sbjct: 489 SIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMIT 548
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
F HG R +E F QM EGVKP+ VT+ +L AC+H G+V +G +FNSM + I
Sbjct: 549 GFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIK 608
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
P + H++C++D+L RAG L++ E+IN D +V + L ACRVH N +G+ A+
Sbjct: 609 PKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARK 668
Query: 495 LLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+LE+ P + Y+ LSN+YA G W E T R+ +K L KE G +W++
Sbjct: 669 ILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIE 718
Score = 154 bits (389), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 118/483 (24%), Positives = 233/483 (48%), Gaps = 27/483 (5%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +LL+ C + F L HA +++ ++ + N L+++Y K G A VF+ M
Sbjct: 64 TFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDSAKAEDVFETM 123
Query: 61 ---SERNTVSWSAMISGYDQCGEHWMALHLFS---QMKVLPNEFVFASTLSACASLRALV 114
+R+ VSWSAM++ Y G A+ +F ++ ++PN++ + + + AC++ +
Sbjct: 124 RRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVG 183
Query: 115 QGQQIHGLSLRSG-YASISFVSNSLITMYMKCGQCS--DALSVYANSVGTNSVSYNALIS 171
G+ G +++G + S V SLI M++K G+ S +A V+ N V++ +I+
Sbjct: 184 VGRVTLGFLMKTGHFESDVCVGCSLIDMFVK-GENSFENAYKVFDKMSELNVVTWTLMIT 242
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
++ P + F M+ GF D+F+ + L++ G LH A++
Sbjct: 243 RCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIR----- 297
Query: 232 TPLIGNV---IMSMYAQFNF---IEEVVRVFRLIQDKDVISWNTLINAF-SHFDDQGKSF 284
+ L+ +V ++ MYA+ + +++ +VF ++D V+SW LI + + + ++
Sbjct: 298 SGLVDDVECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAI 357
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
F EM+ + + P+ FTF+S +C + GKQ+ F+ + V N++++M
Sbjct: 358 NLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISM 417
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
+ K + A + F +S +NL+S+NT + + E+A ++ ++ + + TF
Sbjct: 418 FVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTF 477
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH 464
LL + G +RKG+ +S G++ N + LI M + G + N
Sbjct: 478 ASLLSGVANVGSIRKGE-QIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFME 536
Query: 465 HLN 467
+ N
Sbjct: 537 NRN 539
Score = 116 bits (290), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/395 (24%), Positives = 178/395 (45%), Gaps = 15/395 (3%)
Query: 84 ALHLFSQMKVLPNEFV-FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMY 142
AL L ++ + P + V F+S L +C R G+ +H + S + NSLI++Y
Sbjct: 48 ALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLY 107
Query: 143 MKCGQCSDALSVYANSV---GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
K G + A V+ + VS++A+++ + N +VF L+ G VP+ +
Sbjct: 108 SKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGLVPNDY 167
Query: 200 SFVGLLGFSTNLDDFRTGMSLHCQAVKLA-LDCTPLIGNVIMSMYAQ-FNFIEEVVRVFR 257
+ ++ +N D G +K + +G ++ M+ + N E +VF
Sbjct: 168 CYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFD 227
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ + +V++W +I ++ FF +M+ D FT +S+ ++C +
Sbjct: 228 KMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLS-GFESDKFTLSSVFSACAELENLS 286
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKC---GSIGYAHKVFSKMSYRNLISWNTMIA 374
GKQ+H++ R+ DV +LV+MYAKC GS+ KVF +M +++SW +I
Sbjct: 287 LGKQLHSWAIRSGLVDDVEC--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALIT 344
Query: 375 AF-GNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG 432
+ N L AI +F +M +G V+P+ TF+ AC + R G G
Sbjct: 345 GYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQA-FKRG 403
Query: 433 IAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
+A N + +I M ++ R+ + + N
Sbjct: 404 LASNSSVANSVISMFVKSDRMEDAQRAFESLSEKN 438
>AT4G32430.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15652982-15655273 FORWARD
LENGTH=763
Length = 763
Score = 315 bits (806), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 176/529 (33%), Positives = 288/529 (54%), Gaps = 13/529 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
L + V+K GL+S + V N + MY + G AR+VFD MS ++ +SW++++SG Q G
Sbjct: 196 LQSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGT 255
Query: 81 H-WMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+ A+ +F M V + F S ++ C L +QIHGL ++ GY S+ V N
Sbjct: 256 FGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGN 315
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
L++ Y KCG SV+ N VS+ +IS + +F M +G P
Sbjct: 316 ILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMISS-----NKDDAVSIFLNMRFDGVYP 370
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
+ +FVGL+ + + G+ +H +K P +GN +++YA+F +E+ + F
Sbjct: 371 NEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKKAF 430
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW--HA 314
I +++ISWN +I+ F+ ++ F E P+++TF S+L + +
Sbjct: 431 EDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAE--TMPNEYTFGSVLNAIAFAEDI 488
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
S G++ HA L + V +AL++MYAK G+I + KVF++MS +N W ++I+
Sbjct: 489 SVKQGQRCHAHLLKLGLNSCPVVSSALLDMYAKRGNIDESEKVFNEMSQKNQFVWTSIIS 548
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
A+ +HG E + +F +M E V PD VTF +L ACN GMV KG FN M Y +
Sbjct: 549 AYSSHGDFETVMNLFHKMIKENVAPDLVTFLSVLTACNRKGMVDKGYEIFNMMIEVYNLE 608
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
P+ H+SC++DMLGRAGRL E EE +++ +L S+L +CR+HGN+ +G ++A+L
Sbjct: 609 PSHEHYSCMVDMLGRAGRLKEAEELMSEVPGGPGESMLQSMLGSCRLHGNVKMGAKVAEL 668
Query: 495 LLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
+E+ P + YV + N+YA W++ RK ++ + KE G++W+
Sbjct: 669 AMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWI 717
Score = 191 bits (484), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 138/491 (28%), Positives = 243/491 (49%), Gaps = 26/491 (5%)
Query: 5 TIGTLLQRCSKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
T+ L+ C + G +H G S V VSN ++ MY K GR A +F+ + +
Sbjct: 80 TLCLALKACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVD 139
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQI 119
+ VSW+ ++SG+D ++ +AL+ +MK V+ + F +++ LS C + G Q+
Sbjct: 140 PDVVSWNTILSGFD---DNQIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQL 196
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEP 179
+++G S V NS ITMY + G A V+ + +S+N+L+SG + E
Sbjct: 197 QSTVVKTGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGL--SQEG 254
Query: 180 EKGFE---VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
GFE +F+ M++EG D SF ++ + D + +H +K + +G
Sbjct: 255 TFGFEAVVIFRDMMREGVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVG 314
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
N++MS Y++ +E V VF + +++V+SW T+I+ S+ DD FL M +
Sbjct: 315 NILMSRYSKCGVLEAVKSVFHQMSERNVVSWTTMIS--SNKDDAVSIFL----NMRFDGV 368
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
P++ TF ++ + + G +IH +T + V N+ + +YAK ++ A K
Sbjct: 369 YPNEVTFVGLINAVKCNEQIKEGLKIHGLCIKTGFVSEPSVGNSFITLYAKFEALEDAKK 428
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL--IACNHS 414
F +++R +ISWN MI+ F +G A+++F AE + P+ TF +L IA
Sbjct: 429 AFEDITFREIISWNAMISGFAQNGFSHEALKMFLSAAAETM-PNEYTFGSVLNAIAFAED 487
Query: 415 GMVRKGD-LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLG 473
V++G + + ++ P + S L+DM + G + E E+ N+ N V
Sbjct: 488 ISVKQGQRCHAHLLKLGLNSCPVVS--SALLDMYAKRGNIDESEKVFNEMSQKNQ-FVWT 544
Query: 474 SLLSACRVHGN 484
S++SA HG+
Sbjct: 545 SIISAYSSHGD 555
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/375 (31%), Positives = 193/375 (51%), Gaps = 15/375 (4%)
Query: 52 LARKVFDGMSERN-TVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASL 110
+A K+FDG S+RN T S + IS + AL +F + L ++ C +L
Sbjct: 26 IAHKLFDGSSQRNATTSINHSISESLRRNSPARALSIFKENLQLGYFGRHMDEVTLCLAL 85
Query: 111 RA----LVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY 166
+A L +G QIHG S SG+ S VSN+++ MY K G+ +AL ++ N V + VS+
Sbjct: 86 KACRGDLKRGCQIHGFSTTSGFTSFVCVSNAVMGMYRKAGRFDNALCIFENLVDPDVVSW 145
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK 226
N ++SGF +N + M G V D F++ L F + F G+ L VK
Sbjct: 146 NTILSGFDDN---QIALNFVVRMKSAGVVFDAFTYSTALSFCVGSEGFLLGLQLQSTVVK 202
Query: 227 LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG-KSFL 285
L+ ++GN ++MY++ RVF + KD+ISWN+L++ S G ++ +
Sbjct: 203 TGLESDLVVGNSFITMYSRSGSFRGARRVFDEMSFKDMISWNSLLSGLSQEGTFGFEAVV 262
Query: 286 FFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMY 345
F++MM E + D +F S++ +C +QIH + + V N L++ Y
Sbjct: 263 IFRDMMRE-GVELDHVSFTSVITTCCHETDLKLARQIHGLCIKRGYESLLEVGNILMSRY 321
Query: 346 AKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
+KCG + VF +MS RN++SW TMI++ + A+ IF M+ +GV P+ VTF
Sbjct: 322 SKCGVLEAVKSVFHQMSERNVVSWTTMISSNKDD-----AVSIFLNMRFDGVYPNEVTFV 376
Query: 406 GLLIACNHSGMVRKG 420
GL+ A + +++G
Sbjct: 377 GLINAVKCNEQIKEG 391
>AT3G14730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4949385-4951346 REVERSE
LENGTH=653
Length = 653
Score = 313 bits (803), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 181/548 (33%), Positives = 291/548 (53%), Gaps = 18/548 (3%)
Query: 10 LQRCSKTMTF----GLHAAVLKIG-LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
LQRC++ + +H +++ G L L+NMY KCG + A VF G SER+
Sbjct: 67 LQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGG-SERD 125
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHG 121
++A+ISG+ G A+ + +M+ +LP+++ F S L ++ L +++HG
Sbjct: 126 VFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAME-LSDVKKVHG 184
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISGFVENHEPE 180
L+ + G+ S +V + L+T Y K DA V+ +SV +NAL++G+ + E
Sbjct: 185 LAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQIFRFE 244
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
VF M +EG R + +L T D G S+H AVK ++ N ++
Sbjct: 245 DALLVFSKMREEGVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVVSNALI 304
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS-IRPD 299
MY + ++EE +F + ++D+ +WN+++ + D + F+ M+ CS IRPD
Sbjct: 305 DMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERML--CSGIRPD 362
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRT----RQYWDVGVHNALVNMYAKCGSIGYAH 355
T ++L +C AS G++IH ++ + R+ + +HN+L++MY KCG + A
Sbjct: 363 IVTLTTVLPTCGRLASLRQGREIHGYMIVSGLLNRKSSNEFIHNSLMDMYVKCGDLRDAR 422
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
VF M ++ SWN MI +G GE A+++F M GVKPD +TF GLL AC+HSG
Sbjct: 423 MVFDSMRVKDSASWNIMINGYGVQSCGELALDMFSCMCRAGVKPDEITFVGLLQACSHSG 482
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
+ +G + ME Y I P H++C+IDMLGRA +L E E ++PVV S+
Sbjct: 483 FLNEGRNFLAQMETVYNILPTSDHYACVIDMLGRADKLEEAYELAISKPICDNPVVWRSI 542
Query: 476 LSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR 535
LS+CR+HGN + K L E+ P YVL+SN+Y G + EV R ++ ++
Sbjct: 543 LSSCRLHGNKDLALVAGKRLHELEPEHCGGYVLMSNVYVEAGKYEEVLDVRDAMRQQNVK 602
Query: 536 KEPGYAWL 543
K PG +W+
Sbjct: 603 KTPGCSWI 610
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 165/323 (51%), Gaps = 9/323 (2%)
Query: 102 STLSACASLRALVQGQQIHGLSLRSGYASIS-FVSNSLITMYMKCGQCSDALSVYANSVG 160
+TL CA + V GQQIHG +R G+ S SL+ MY KCG A+ V+ S
Sbjct: 65 ATLQRCAQRKDYVSGQQIHGFMVRKGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFGGS-E 123
Query: 161 TNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST--NLDDFRTGM 218
+ YNALISGFV N P E ++ M G +PD+++F LL S L D +
Sbjct: 124 RDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLLKGSDAMELSDVK--- 180
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK-DVISWNTLINAFSHF 277
+H A KL D +G+ +++ Y++F +E+ +VF + D+ D + WN L+N +S
Sbjct: 181 KVHGLAFKLGFDSDCYVGSGLVTSYSKFMSVEDAQKVFDELPDRDDSVLWNALVNGYSQI 240
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
+ L F +M E + T S+L++ T +G+ IH +T D+ V
Sbjct: 241 FRFEDALLVFSKMREE-GVGVSRHTITSVLSAFTVSGDIDNGRSIHGLAVKTGSGSDIVV 299
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
NAL++MY K + A+ +F M R+L +WN+++ G + + +FE+M G+
Sbjct: 300 SNALIDMYGKSKWLEEANSIFEAMDERDLFTWNSVLCVHDYCGDHDGTLALFERMLCSGI 359
Query: 398 KPDSVTFTGLLIACNHSGMVRKG 420
+PD VT T +L C +R+G
Sbjct: 360 RPDIVTLTTVLPTCGRLASLRQG 382
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH--NALVNMYAKCGSIGYAHKVFS 359
T + L C ++ G+QIH F+ R + + D +LVNMYAKCG + A VF
Sbjct: 62 TCIATLQRCAQRKDYVSGQQIHGFMVR-KGFLDDSPRAGTSLVNMYAKCGLMRRAVLVFG 120
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
S R++ +N +I+ F +G A+E + +M+A G+ PD TF LL
Sbjct: 121 G-SERDVFGYNALISGFVVNGSPLDAMETYREMRANGILPDKYTFPSLL 168
>AT4G21300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11336479-11339052 FORWARD
LENGTH=857
Length = 857
Score = 313 bits (802), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/528 (32%), Positives = 287/528 (54%), Gaps = 5/528 (0%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH V+ G+ + N LL+MY KCGR A K+F MS +TV+W+ MISGY Q G
Sbjct: 261 LHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGL 320
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+L F +M VLP+ F+S L + + L +QIH +R + F++++
Sbjct: 321 MEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSA 380
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
LI Y KC S A ++++ + V + A+ISG++ N E+F+ +++ P+
Sbjct: 381 LIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPN 440
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+ V +L L + G LH +K D IG ++ MYA+ + +F
Sbjct: 441 EITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAYEIFE 500
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ +D++SWN++I + D+ + F++M I D + ++ L++C S
Sbjct: 501 RLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQM-GVSGICYDCVSISAALSACANLPSES 559
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
GK IH F+ + DV + L++MYAKCG++ A VF M +N++SWN++IAA G
Sbjct: 560 FGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTMKEKNIVSWNSIIAACG 619
Query: 378 NHGLGERAIEIFEQM-KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
NHG + ++ +F +M + G++PD +TF ++ +C H G V +G +F SM YGI P
Sbjct: 620 NHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQPQ 679
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
H++C++D+ GRAGRL+E E + D V G+LL ACR+H N+ + E + L+
Sbjct: 680 QEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSKLM 739
Query: 497 EVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
++ P + YVL+SN +A+ W VT R ++K ++K PGY+W++
Sbjct: 740 DLDPSNSGYYVLISNAHANAREWESVTKVRSLMKEREVQKIPGYSWIE 787
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/492 (26%), Positives = 241/492 (48%), Gaps = 14/492 (2%)
Query: 3 LETIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
+ T L++ C F L V +G+ + FV++ L+ Y++ G++ + K+FD
Sbjct: 138 VSTFPCLVKACVALKNFKGIDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFD 197
Query: 59 GMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQ 115
+ +++ V W+ M++GY +CG + FS M+ + PN F LS CAS +
Sbjct: 198 RVLQKDCVIWNVMLNGYAKCGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDL 257
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G Q+HGL + SG + NSL++MY KCG+ DA ++ ++V++N +ISG+V+
Sbjct: 258 GVQLHGLVVVSGVDFEGSIKNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQ 317
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ E+ F M+ G +PD +F LL + ++ +HC ++ ++ +
Sbjct: 318 SGLMEESLTFFYEMISSGVLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFL 377
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
+ ++ Y + + +F DV+ + +I+ + H S F+ ++ +
Sbjct: 378 TSALIDAYFKCRGVSMAQNIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLV-KVK 436
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
I P++ T SIL + G+++H F+ + + A+++MYAKCG + A+
Sbjct: 437 ISPNEITLVSILPVIGILLALKLGRELHGFIIKKGFDNRCNIGCAVIDMYAKCGRMNLAY 496
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
++F ++S R+++SWN+MI AI+IF QM G+ D V+ + L AC +
Sbjct: 497 EIFERLSKRDIVSWNSMITRCAQSDNPSAAIDIFRQMGVSGICYDCVSISAALSACANLP 556
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLG-- 473
G M + +A ++ S LIDM + G L +N F + + ++
Sbjct: 557 SESFGKAIHGFM-IKHSLASDVYSESTLIDMYAKCGNLKAA---MNVFKTMKEKNIVSWN 612
Query: 474 SLLSACRVHGNM 485
S+++AC HG +
Sbjct: 613 SIIAACGNHGKL 624
Score = 142 bits (357), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 113/490 (23%), Positives = 229/490 (46%), Gaps = 16/490 (3%)
Query: 6 IGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
+ LLQ CS +HA ++ + + ++L MY CG K+F +
Sbjct: 38 LSLLLQACSNPNLLRQGKQVHAFLIVNSISGDSYTDERILGMYAMCGSFSDCGKMFYRLD 97
Query: 62 ERNTV--SWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
R + W+++IS + + G AL + +M V P+ F + AC +L+ +G
Sbjct: 98 LRRSSIRPWNSIISSFVRNGLLNQALAFYFKMLCFGVSPDVSTFPCLVKACVALKNF-KG 156
Query: 117 QQIHGLSLRS-GYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
++ S G FV++SLI Y++ G+ ++ + + V +N +++G+ +
Sbjct: 157 IDFLSDTVSSLGMDCNEFVASSLIKAYLEYGKIDVPSKLFDRVLQKDCVIWNVMLNGYAK 216
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ + F +M + P+ +F +L + G+ LH V +D I
Sbjct: 217 CGALDSVIKGFSVMRMDQISPNAVTFDCVLSVCASKLLIDLGVQLHGLVVVSGVDFEGSI 276
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
N ++SMY++ ++ ++FR++ D ++WN +I+ + +S FF EM++
Sbjct: 277 KNSLLSMYSKCGRFDDASKLFRMMSRADTVTWNCMISGYVQSGLMEESLTFFYEMISS-G 335
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
+ PD TF+S+L S + + + KQIH ++ R D+ + +AL++ Y KC + A
Sbjct: 336 VLPDAITFSSLLPSVSKFENLEYCKQIHCYIMRHSISLDIFLTSALIDAYFKCRGVSMAQ 395
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
+FS+ + +++ + MI+ + ++GL ++E+F + + P+ +T +L
Sbjct: 396 NIFSQCNSVDVVVFTAMISGYLHNGLYIDSLEMFRWLVKVKISPNEITLVSILPVIGILL 455
Query: 416 MVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGS 474
++ G +L+ ++ + NIG +IDM + GR++ E + D V S
Sbjct: 456 ALKLGRELHGFIIKKGFDNRCNIG--CAVIDMYAKCGRMNLAYEIFERLSK-RDIVSWNS 512
Query: 475 LLSACRVHGN 484
+++ C N
Sbjct: 513 MITRCAQSDN 522
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 8/120 (6%)
Query: 5 TIGTLLQRCS--KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
+I L C+ + +FG +H ++K L S V+ + L++MY KCG + A VF M
Sbjct: 544 SISAALSACANLPSESFGKAIHGFMIKHSLASDVYSESTLIDMYAKCGNLKAAMNVFKTM 603
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQG 116
E+N VSW+++I+ G+ +L LF +M + P++ F +S+C + + +G
Sbjct: 604 KEKNIVSWNSIIAACGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEG 663
>AT5G39680.1 | Symbols: EMB2744 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:15884236-15886368 REVERSE
LENGTH=710
Length = 710
Score = 312 bits (800), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/557 (32%), Positives = 300/557 (53%), Gaps = 29/557 (5%)
Query: 10 LQRCSKTMTFGLHAAVLKIG--LQSHVFVSNQ------------LLNMYVKCGRVVLARK 55
+ R ++ + +++ L+IG + +H+ V+NQ L+N+YVKC V ARK
Sbjct: 31 IDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARK 90
Query: 56 VFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLR 111
+FD M ERN VSW AM+ GY G + L LF M + PNEFV +C++
Sbjct: 91 LFDLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSG 150
Query: 112 ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALIS 171
+ +G+Q HG L+ G S FV N+L+ MY C +A+ V + + +++ +S
Sbjct: 151 RIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRVLDDLPYCDLSVFSSALS 210
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
G++E ++G +V + E FV + +++ L +NL D + +H + V+ +
Sbjct: 211 GYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGFNA 270
Query: 232 TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSF-----LF 286
+++MY + + RVF +++ T+++A+ Q KSF LF
Sbjct: 271 EVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYF----QDKSFEEALNLF 326
Query: 287 FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYA 346
K M+ + P+++TFA +L S + G +H + ++ V V NALVNMYA
Sbjct: 327 SK--MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYA 384
Query: 347 KCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTG 406
K GSI A K FS M++R++++WNTMI+ +HGLG A+E F++M G P+ +TF G
Sbjct: 385 KSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIG 444
Query: 407 LLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHL 466
+L AC+H G V +G YFN + + + P+I H++C++ +L +AG + E+++
Sbjct: 445 VLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIE 504
Query: 467 NDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSAR 526
D V +LL+AC V N +G+++A+ +E P + YVLLSN++A W V R
Sbjct: 505 WDVVAWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVR 564
Query: 527 KMLKGSGLRKEPGYAWL 543
++ G++KEPG +W+
Sbjct: 565 SLMNNRGVKKEPGVSWI 581
>AT2G03380.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1028292-1030361 FORWARD
LENGTH=689
Length = 689
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 173/529 (32%), Positives = 285/529 (53%), Gaps = 8/529 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY---DQ 77
+H ++K+ +V ++ LL+MY KCG + A KVF+ ++ RN V W++MI+GY D
Sbjct: 164 IHCQLVKVPSFDNVVLTG-LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDL 222
Query: 78 CGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
C E + + + VL NE+ + + + AC L AL QG+ HG ++SG S + S
Sbjct: 223 CEEGLVLFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTS 282
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY+KCG S+A V+ + V + A+I G+ N + +F+ M P+
Sbjct: 283 LLDMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPN 342
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+ +L +++ G S+H ++K+ + T + N ++ MYA+ + VF
Sbjct: 343 CVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTN-VANALVHMYAKCYQNRDAKYVFE 401
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ +KD+++WN++I+ FS ++ F M +E S+ P+ T AS+ ++C S
Sbjct: 402 MESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSE-SVTPNGVTVASLFSACASLGSLA 460
Query: 318 HGKQIHAFLFRTRQYWDVGVH--NALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G +HA+ + VH AL++ YAKCG A +F + +N I+W+ MI
Sbjct: 461 VGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIEEKNTITWSAMIGG 520
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+G G ++E+FE+M + KP+ TFT +L AC H+GMV +G YF+SM Y P
Sbjct: 521 YGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSACGHTGMVNEGKKYFSSMYKDYNFTP 580
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
+ H++C++DML RAG L + + I K D G+ L C +H +GE + K +
Sbjct: 581 STKHYTCMVDMLARAGELEQALDIIEKMPIQPDVRCFGAFLHGCGMHSRFDLGEIVIKKM 640
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
L++ P S YVL+SNLYASDG WN+ R ++K GL K G++ ++
Sbjct: 641 LDLHPDDASYYVLVSNLYASDGRWNQAKEVRNLMKQRGLSKIAGHSTME 689
Score = 167 bits (422), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/448 (26%), Positives = 211/448 (47%), Gaps = 8/448 (1%)
Query: 9 LLQRCSKTMTFGL-HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVS 67
LL +C+ + H + GL + ++ +L+++Y G AR VFD + E +
Sbjct: 50 LLSKCTNIDSLRQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDFYL 109
Query: 68 WSAMISGYDQCGEHWMALHLFS---QMKVLPNEFVFASTLSACASLRALVQGQQIHGLSL 124
W M+ Y E + L+ + ++ VF+ L AC L+ L G++IH L
Sbjct: 110 WKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIH-CQL 168
Query: 125 RSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
+ + V L+ MY KCG+ A V+ + N V + ++I+G+V+N E+G
Sbjct: 169 VKVPSFDNVVLTGLLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEEGLV 228
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYA 244
+F M + + + +++ L+ T L G H VK ++ + + ++ MY
Sbjct: 229 LFNRMRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLLDMYV 288
Query: 245 QFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFA 304
+ I RVF D++ W +I ++H ++ F++M I+P+ T A
Sbjct: 289 KCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKG-VEIKPNCVTIA 347
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR 364
S+L+ C + G+ +H + WD V NALV+MYAKC A VF S +
Sbjct: 348 SVLSGCGLIENLELGRSVHGLSIKV-GIWDTNVANALVHMYAKCYQNRDAKYVFEMESEK 406
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLY 423
++++WN++I+ F +G A+ +F +M +E V P+ VT L AC G + G L+
Sbjct: 407 DIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLGSLAVGSSLH 466
Query: 424 FNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
S++ + + ++ + L+D + G
Sbjct: 467 AYSVKLGFLASSSVHVGTALLDFYAKCG 494
Score = 132 bits (331), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 199/428 (46%), Gaps = 53/428 (12%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNS 163
LS C ++ +L +Q HG+ +G ++ L+++Y G DA V+ +
Sbjct: 51 LSKCTNIDSL---RQSHGVLTGNGLMGDISIATKLVSLYGFFGYTKDARLVFDQIPEPDF 107
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
+ ++ + N E + +++ L+++ GF D F L T L D G +HCQ
Sbjct: 108 YLWKVMLRCYCLNKESVEVVKLYDLLMKHGFRYDDIVFSKALKACTELQDLDNGKKIHCQ 167
Query: 224 AVKL-ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGK 282
VK+ + D L G ++ MYA+ I+ +VF I ++V+ W ++I + D +
Sbjct: 168 LVKVPSFDNVVLTG--LLDMYAKCGEIKSAHKVFNDITLRNVVCWTSMIAGYVKNDLCEE 225
Query: 283 SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALV 342
+ F M E ++ +++T+ +++ +CT ++ GK H L ++ + +L+
Sbjct: 226 GLVLFNR-MRENNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVKSGIELSSCLVTSLL 284
Query: 343 NMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSV 402
+MY KCG I A +VF++ S+ +L+ W MI + ++G A+ +F++MK +KP+ V
Sbjct: 285 DMYVKCGDISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALSLFQKMKGVEIKPNCV 344
Query: 403 TFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHF-----SCLIDMLGR------AG 451
T +L C G++ +L + +G++ +G + + L+ M + A
Sbjct: 345 TIASVLSGC---GLIENLEL----GRSVHGLSIKVGIWDTNVANALVHMYAKCYQNRDAK 397
Query: 452 RLSEVE----------------------EYINKFHHLN------DPVVLGSLLSACRVHG 483
+ E+E E + FH +N + V + SL SAC G
Sbjct: 398 YVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRMNSESVTPNGVTVASLFSACASLG 457
Query: 484 NMAIGERL 491
++A+G L
Sbjct: 458 SLAVGSSL 465
>AT1G06140.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:1864796-1866472 FORWARD
LENGTH=558
Length = 558
Score = 312 bits (799), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 179/532 (33%), Positives = 292/532 (54%), Gaps = 13/532 (2%)
Query: 18 TFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS--ERNTVSWSAMISGY 75
T +HA V+ G + V + + L N Y++ R+ A F+ + +RN SW+ ++SGY
Sbjct: 23 TQQVHAKVIIHGFEDEVVLGSSLTNAYIQSNRLDFATSSFNRIPCWKRNRHSWNTILSGY 82
Query: 76 DQCGE--HWMALHLFSQMK-----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
+ + L L+++M+ V VFA + AC L L G IHGL++++G
Sbjct: 83 SKSKTCCYSDVLLLYNRMRRHCDGVDSFNLVFA--IKACVGLGLLENGILIHGLAMKNGL 140
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
+V+ SL+ MY + G A V+ NSV + L+ G+++ + + F +F L
Sbjct: 141 DKDDYVAPSLVEMYAQLGTMESAQKVFDEIPVRNSVLWGVLMKGYLKYSKDPEVFRLFCL 200
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA-LDCTPLIGNVIMSMYAQFN 247
M G D + + L+ N+ + G +H +++ + +D + + I+ MY +
Sbjct: 201 MRDTGLALDALTLICLVKACGNVFAGKVGKCVHGVSIRRSFIDQSDYLQASIIDMYVKCR 260
Query: 248 FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL 307
++ ++F D++V+ W TLI+ F+ + ++F F++M+ E SI P+ T A+IL
Sbjct: 261 LLDNARKLFETSVDRNVVMWTTLISGFAKCERAVEAFDLFRQMLRE-SILPNQCTLAAIL 319
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI 367
SC+ S HGK +H ++ R D + ++MYA+CG+I A VF M RN+I
Sbjct: 320 VSCSSLGSLRHGKSVHGYMIRNGIEMDAVNFTSFIDMYARCGNIQMARTVFDMMPERNVI 379
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
SW++MI AFG +GL E A++ F +MK++ V P+SVTF LL AC+HSG V++G F SM
Sbjct: 380 SWSSMINAFGINGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESM 439
Query: 428 EAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAI 487
YG+ P H++C++D+LGRAG + E + +I+ G+LLSACR+H + +
Sbjct: 440 TRDYGVVPEEEHYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACRIHKEVDL 499
Query: 488 GERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+A+ LL + P +S YVLLSN+YA GMW V R+ + G RK G
Sbjct: 500 AGEIAEKLLSMEPEKSSVYVLLSNIYADAGMWEMVNCVRRKMGIKGYRKHVG 551
>AT3G25970.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:9500116-9502221 REVERSE
LENGTH=701
Length = 701
Score = 311 bits (797), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 178/535 (33%), Positives = 299/535 (55%), Gaps = 15/535 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V+K G + +V+V + L++MY KC RV A + F +SE N+VSW+A+I+G+ Q +
Sbjct: 123 VHGLVIKGGYECNVYVGSSLVDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRD 182
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQG-------QQIHGLSLRSGYASISF 133
A L M++ + A T A L L+ +Q+H L+ G
Sbjct: 183 IKTAFWLLGLMEMKAAVTMDAGTF---APLLTLLDDPMFCNLLKQVHAKVLKLGLQHEIT 239
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNS-VSYNALISGFVENHEPEKGFEVFKLMLQE 192
+ N++I+ Y CG SDA V+ G+ +S+N++I+GF ++ E FE+F M +
Sbjct: 240 ICNAMISSYADCGSVSDAKRVFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRH 299
Query: 193 GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQF--NFIE 250
D +++ GLL + + G SLH +K L+ N ++SMY QF +E
Sbjct: 300 WVETDIYTYTGLLSACSGEEHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTME 359
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+ + +F ++ KD+ISWN++I F+ + FF + I+ DD+ F+++L SC
Sbjct: 360 DALSLFESLKSKDLISWNSIITGFAQKGLSEDAVKFFS-YLRSSEIKVDDYAFSALLRSC 418
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISW 369
+ A+ G+QIHA ++ + V ++L+ MY+KCG I A K F ++S + + ++W
Sbjct: 419 SDLATLQLGQQIHALATKSGFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAW 478
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
N MI + HGLG+ ++++F QM + VK D VTFT +L AC+H+G++++G N ME
Sbjct: 479 NAMILGYAQHGLGQVSLDLFSQMCNQNVKLDHVTFTAILTACSHTGLIQEGLELLNLMEP 538
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
Y I P + H++ +D+LGRAG +++ +E I DP+VL + L CR G + +
Sbjct: 539 VYKIQPRMEHYAAAVDLLGRAGLVNKAKELIESMPLNPDPMVLKTFLGVCRACGEIEMAT 598
Query: 490 RLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
++A LLE+ P YV LS++Y+ W E S +KM+K G++K PG++W++
Sbjct: 599 QVANHLLEIEPEDHFTYVSLSHMYSDLKKWEEKASVKKMMKERGVKKVPGWSWIE 653
Score = 216 bits (550), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 142/472 (30%), Positives = 239/472 (50%), Gaps = 15/472 (3%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
H +K G S ++VSN++L+ Y+K G + A +FD M +R++VSW+ MISGY CG+
Sbjct: 23 HCYAIKCGSISDIYVSNRILDSYIKFGFLGYANMLFDEMPKRDSVSWNTMISGYTSCGKL 82
Query: 82 WMALHLFSQMKVLPNE---FVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSL 138
A LF+ MK ++ + F+ L AS++ G+Q+HGL ++ GY +V +SL
Sbjct: 83 EDAWCLFTCMKRSGSDVDGYSFSRLLKGIASVKRFDLGEQVHGLVIKGGYECNVYVGSSL 142
Query: 139 ITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM-LQEGFVPD 197
+ MY KC + DA + NSVS+NALI+GFV+ + + F + LM ++ D
Sbjct: 143 VDMYAKCERVEDAFEAFKEISEPNSVSWNALIAGFVQVRDIKTAFWLLGLMEMKAAVTMD 202
Query: 198 RFSFVGLLGFSTNLDD---FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
+F LL T LDD +H + +KL L I N ++S YA + + R
Sbjct: 203 AGTFAPLL---TLLDDPMFCNLLKQVHAKVLKLGLQHEITICNAMISSYADCGSVSDAKR 259
Query: 255 VFR-LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
VF L KD+ISWN++I FS + + +F F +M + D +T+ +L++C+
Sbjct: 260 VFDGLGGSKDLISWNSMIAGFSKHELKESAFELFIQMQRHW-VETDIYTYTGLLSACSGE 318
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAK--CGSIGYAHKVFSKMSYRNLISWNT 371
+ GK +H + + NAL++MY + G++ A +F + ++LISWN+
Sbjct: 319 EHQIFGKSLHGMVIKKGLEQVTSATNALISMYIQFPTGTMEDALSLFESLKSKDLISWNS 378
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
+I F GL E A++ F +++ +K D F+ LL +C+ ++ G +++
Sbjct: 379 IITGFAQKGLSEDAVKFFSYLRSSEIKVDDYAFSALLRSCSDLATLQLGQ-QIHALATKS 437
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
G N S LI M + G + + + + V +++ HG
Sbjct: 438 GFVSNEFVISSLIVMYSKCGIIESARKCFQQISSKHSTVAWNAMILGYAQHG 489
>AT5G27110.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:9538572-9540647 REVERSE
LENGTH=691
Length = 691
Score = 310 bits (795), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/528 (32%), Positives = 293/528 (55%), Gaps = 5/528 (0%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V+K G V V++ L+ MY K + +VFD M ER+ SW+ +IS + Q GE
Sbjct: 129 IHTLVVKSGYVCDVVVASSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGE 188
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL LF +M+ PN +SAC+ L L +G++IH ++ G+ +V+++
Sbjct: 189 AEKALELFGRMESSGFEPNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSA 248
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY KC A V+ + V++N++I G+V + + E+ M+ EG P
Sbjct: 249 LVDMYGKCDCLEVAREVFQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIEGTRPS 308
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+ + +L + + G +H ++ ++ + ++ +Y + VF
Sbjct: 309 QTTLTSILMACSRSRNLLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFS 368
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
Q SWN +I+++ + K+ + +M++ ++PD TF S+L +C+ A+
Sbjct: 369 KTQKDVAESWNVMISSYISVGNWFKAVEVYDQMVS-VGVKPDVVTFTSVLPACSQLAALE 427
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
GKQIH + +R D + +AL++MY+KCG+ A ++F+ + ++++SW MI+A+G
Sbjct: 428 KGKQIHLSISESRLETDELLLSALLDMYSKCGNEKEAFRIFNSIPKKDVVSWTVMISAYG 487
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
+HG A+ F++M+ G+KPD VT +L AC H+G++ +G +F+ M + YGI P I
Sbjct: 488 SHGQPREALYQFDEMQKFGLKPDGVTLLAVLSACGHAGLIDEGLKFFSQMRSKYGIEPII 547
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPV-VLGSLLSACRVHGNMAIGERLAKLLL 496
H+SC+ID+LGRAGRL E E I + +D +L +L SAC +H ++G+R+A+LL+
Sbjct: 548 EHYSCMIDILGRAGRLLEAYEIIQQTPETSDNAELLSTLFSACCLHLEHSLGDRIARLLV 607
Query: 497 EVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
E P S Y++L NLYAS W+ R +K GLRK+PG +W++
Sbjct: 608 ENYPDDASTYMVLFNLYASGESWDAARRVRLKMKEMGLRKKPGCSWIE 655
Score = 212 bits (540), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 137/469 (29%), Positives = 229/469 (48%), Gaps = 8/469 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVS-WSAMISGYDQCG 79
+H +L +GL+ V + L+N+Y C AR VF+ R+ V W++++SGY +
Sbjct: 26 VHQRILTLGLRRDVVLCKSLINVYFTCKDHCSARHVFENFDIRSDVYIWNSLMSGYSKNS 85
Query: 80 EHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
L +F ++ +P+ F F + + A +L G+ IH L ++SGY V+
Sbjct: 86 MFHDTLEVFKRLLNCSICVPDSFTFPNVIKAYGALGREFLGRMIHTLVVKSGYVCDVVVA 145
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+SL+ MY K ++L V+ + S+N +IS F ++ E EK E+F M GF
Sbjct: 146 SSLVGMYAKFNLFENSLQVFDEMPERDVASWNTVISCFYQSGEAEKALELFGRMESSGFE 205
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
P+ S + + L G +H + VK + + + ++ MY + + +E V
Sbjct: 206 PNSVSLTVAISACSRLLWLERGKEIHRKCVKKGFELDEYVNSALVDMYGKCDCLEVAREV 265
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F+ + K +++WN++I + D M+ E RP T SIL +C+ +
Sbjct: 266 FQKMPRKSLVAWNSMIKGYVAKGDSKSCVEILNRMIIE-GTRPSQTTLTSILMACSRSRN 324
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
LHGK IH ++ R+ D+ V+ +L+++Y KCG A VFSK SWN MI++
Sbjct: 325 LLHGKFIHGYVIRSVVNADIYVNCSLIDLYFKCGEANLAETVFSKTQKDVAESWNVMISS 384
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ + G +A+E+++QM + GVKPD VTFT +L AC+ + KG S+ + +
Sbjct: 385 YISVGNWFKAVEVYDQMVSVGVKPDVVTFTSVLPACSQLAALEKGKQIHLSISESR-LET 443
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
+ S L+DM + G E N D V ++SA HG
Sbjct: 444 DELLLSALLDMYSKCGNEKEAFRIFNSIPK-KDVVSWTVMISAYGSHGQ 491
>AT1G08070.1 | Symbols: OTP82 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2514374-2516599 REVERSE
LENGTH=741
Length = 741
Score = 309 bits (792), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 190/576 (32%), Positives = 294/576 (51%), Gaps = 49/576 (8%)
Query: 8 TLLQRCSKTMTFGL-HAAVLKIGLQSHVFVSNQLLNMYVKCGR---VVLARKVFDGMSER 63
+LL C + + HA ++KIGL + + ++L+ + + A VF + E
Sbjct: 38 SLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEP 97
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIH 120
N + W+ M G+ + AL L+ M +LPN + F L +CA +A +GQQIH
Sbjct: 98 NLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIH 157
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY-------------- 166
G L+ G +V SLI+MY++ G+ DA V+ S + VSY
Sbjct: 158 GHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIE 217
Query: 167 -----------------NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
NA+ISG+ E ++ E+FK M++ PD + V ++
Sbjct: 218 NAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACA 277
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
G +H I N ++ +Y++ +E +F + KDVISWNT
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNT 337
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
LI ++H + ++ L F+EM+ P+D T SIL +C + G+ IH ++ +
Sbjct: 338 LIGGYTHMNLYKEALLLFQEMLRSGET-PNDVTMLSILPACAHLGAIDIGRWIHVYIDKR 396
Query: 330 RQYWDVGVHNA------LVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
+ GV NA L++MYAKCG I AH+VF+ + +++L SWN MI F HG +
Sbjct: 397 LK----GVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRAD 452
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL 443
+ ++F +M+ G++PD +TF GLL AC+HSGM+ G F +M Y + P + H+ C+
Sbjct: 453 ASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCM 512
Query: 444 IDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTT 503
ID+LG +G E EE IN D V+ SLL AC++HGN+ +GE A+ L+++ P
Sbjct: 513 IDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPENP 572
Query: 504 SPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
YVLLSN+YAS G WNEV R +L G++K PG
Sbjct: 573 GSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPG 608
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/210 (31%), Positives = 109/210 (51%), Gaps = 9/210 (4%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ T++ C+++ + L H + G S++ + N L+++Y KCG + A +F+ +
Sbjct: 268 TMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERL 327
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQ 117
++ +SW+ +I GY + AL LF +M PN+ S L ACA L A+ G+
Sbjct: 328 PYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGR 387
Query: 118 QIHGLSLR--SGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
IH + G + S + SLI MY KCG A V+ + + + S+NA+I GF
Sbjct: 388 WIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAM 447
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
+ + F++F M + G PD +FVGLL
Sbjct: 448 HGRADASFDLFSRMRKIGIQPDDITFVGLL 477
>AT1G18485.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:6363172-6366084 FORWARD
LENGTH=970
Length = 970
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 291/554 (52%), Gaps = 19/554 (3%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ T+L C++ GL H +K+ L + ++N L++MY KCG + A+ +F
Sbjct: 294 TLVTVLPVCAREREIGLGKGVHGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMN 353
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM-----KVLPNEFVFASTLSACASLRALVQ 115
+ +N VSW+ M+ G+ G+ + QM V +E + + C L
Sbjct: 354 NNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPS 413
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
+++H SL+ + V+N+ + Y KCG S A V+ S+NALI G +
Sbjct: 414 LKELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQ 473
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+++P + M G +PD F+ LL + L R G +H ++ L+ +
Sbjct: 474 SNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFV 533
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM----M 291
++S+Y + V +F ++DK ++SWNT+I + ++ F++M +
Sbjct: 534 YLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGI 593
Query: 292 NECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI 351
C I + + +C+ S G++ HA+ + D + +L++MYAK GSI
Sbjct: 594 QLCGI-----SMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSI 648
Query: 352 GYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
+ KVF+ + ++ SWN MI +G HGL + AI++FE+M+ G PD +TF G+L AC
Sbjct: 649 TQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTAC 708
Query: 412 NHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYI-NKFHHLNDPV 470
NHSG++ +G Y + M++++G+ PN+ H++C+IDMLGRAG+L + + + D
Sbjct: 709 NHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVG 768
Query: 471 VLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLK 530
+ SLLS+CR+H N+ +GE++A L E+ P YVLLSNLYA G W +V R+ +
Sbjct: 769 IWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMN 828
Query: 531 GSGLRKEPGYAWLK 544
LRK+ G +W++
Sbjct: 829 EMSLRKDAGCSWIE 842
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 126/435 (28%), Positives = 217/435 (49%), Gaps = 16/435 (3%)
Query: 1 MMLETIGTLLQRCSKTMTFGLHAAVLKI-----GLQSHVFVSNQLLNMYVKCGRVVLARK 55
++ E +G LLQ K + + ++ L++ + +++ MY CG +R
Sbjct: 82 LVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRF 141
Query: 56 VFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLR 111
VFD + +N W+A+IS Y + + L F +M +LP+ F + + ACA +
Sbjct: 142 VFDALRSKNLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMS 201
Query: 112 ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALIS 171
+ G +HGL +++G FV N+L++ Y G +DAL ++ N VS+N++I
Sbjct: 202 DVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLVSWNSMIR 261
Query: 172 GFVENHEPEKGFEVFKLMLQE----GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL 227
F +N E+ F + M++E F+PD + V +L + G +H AVKL
Sbjct: 262 VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 321
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
LD ++ N +M MY++ I +F++ +K+V+SWNT++ FS D +F
Sbjct: 322 RLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVL 381
Query: 288 KEMM-NECSIRPDDFTFASILASCTWHASFLHG-KQIHAFLFRTRQYWDVGVHNALVNMY 345
++M+ ++ D+ T + + C +H SFL K++H + + ++ V NA V Y
Sbjct: 382 RQMLAGGEDVKADEVTILNAVPVC-FHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 346 AKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
AKCGS+ YA +VF + + + SWN +I +++ QMK G+ PDS T
Sbjct: 441 AKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVC 500
Query: 406 GLLIACNHSGMVRKG 420
LL AC+ +R G
Sbjct: 501 SLLSACSKLKSLRLG 515
Score = 95.9 bits (237), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 116/254 (45%), Gaps = 13/254 (5%)
Query: 170 ISGFVENHEPEKGFEVFKLML------QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
IS F E + +K F + + + F+ R + LL S D G +H Q
Sbjct: 50 ISNFCETGDLDKSFRTVQEFVGDDESSSDAFLLVREALGLLLQASGKRKDIEMGRKIH-Q 108
Query: 224 AVK--LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
V L ++ I++MYA ++ VF ++ K++ WN +I+++S +
Sbjct: 109 LVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFDALRSKNLFQWNAVISSYSRNELYD 168
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
+ F EM++ + PD FT+ ++ +C + G +H + +T DV V NAL
Sbjct: 169 EVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNAL 228
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE----GV 397
V+ Y G + A ++F M RNL+SWN+MI F ++G E + + +M E
Sbjct: 229 VSFYGTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAF 288
Query: 398 KPDSVTFTGLLIAC 411
PD T +L C
Sbjct: 289 MPDVATLVTVLPVC 302
>AT3G20730.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7247095-7248878 FORWARD
LENGTH=564
Length = 564
Score = 309 bits (791), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 183/544 (33%), Positives = 297/544 (54%), Gaps = 13/544 (2%)
Query: 10 LQRCS----KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT 65
L+ CS K +H + G S++ + + L+++Y+K G V ARK+FD +S+R+
Sbjct: 19 LKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRISKRDV 78
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGL 122
VSW+AMIS + +CG H AL LF +M V N+F + S L +C L L +G QIHG
Sbjct: 79 VSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGMQIHGS 138
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKG 182
+ A V ++L+++Y +CG+ +A + + + VS+NA+I G+ N +
Sbjct: 139 VEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANACADTS 198
Query: 183 FEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
F +F+LML EG PD F+F LL S + LH A+KL + + +++
Sbjct: 199 FSLFQLMLTEGKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSSALIRSLVNA 258
Query: 243 YAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDD-QGKSFLFFKEMMNECSIRPDDF 301
Y + + ++ + +D++S LI FS ++ +F FK+M+ + D+
Sbjct: 259 YVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDMI-RMKTKMDEV 317
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQY-WDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+S+L CT AS G+QIH F ++ Q +DV + N+L++MYAK G I A F +
Sbjct: 318 VVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSGEIEDAVLAFEE 377
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
M +++ SW ++IA +G HG E+AI+++ +M+ E +KP+ VTF LL AC+H+G G
Sbjct: 378 MKEKDVRSWTSLIAGYGRHGNFEKAIDLYNRMEHERIKPNDVTFLSLLSACSHTGQTELG 437
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN--DPVVLGSLLSA 478
+++M +GI H SC+IDML R+G L E I + G+ L A
Sbjct: 438 WKIYDTMINKHGIEAREEHLSCIIDMLARSGYLEEAYALIRSKEGIVSLSSSTWGAFLDA 497
Query: 479 CRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSG-LRKE 537
CR HGN+ + + A LL + P Y+ L+++YA++G W+ + RK++K SG K
Sbjct: 498 CRRHGNVQLSKVAATQLLSMEPRKPVNYINLASVYAANGAWDNALNTRKLMKESGSCNKA 557
Query: 538 PGYA 541
PGY+
Sbjct: 558 PGYS 561
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 176/394 (44%), Gaps = 17/394 (4%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
++ L C+ Q IHG S+ +G+ S + + LI +Y+K G A ++
Sbjct: 14 LYLKALKLCSYQNVKKQLLLIHGNSITNGFCSNLQLKDMLIDLYLKQGDVKHARKLFDRI 73
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
+ VS+ A+IS F +FK M +E ++F++ +L +L + GM
Sbjct: 74 SKRDVVSWTAMISRFSRCGYHPDALLLFKEMHREDVKANQFTYGSVLKSCKDLGCLKEGM 133
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD 278
+H K ++ + ++S+YA+ +EE F ++++D++SWN +I+ ++
Sbjct: 134 QIHGSVEKGNCAGNLIVRSALLSLYARCGKMEEARLQFDSMKERDLVSWNAMIDGYTANA 193
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTF-----ASILASCTWHASFLHGKQIHAFLFRTRQYW 333
SF F+ M+ E +PD FTF ASI+ C S LHG I R+
Sbjct: 194 CADTSFSLFQLMLTE-GKKPDCFTFGSLLRASIVVKCLEIVSELHGLAIKLGFGRSS--- 249
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH-GLGERAIEIFEQM 392
+ +LVN Y KCGS+ A K+ R+L+S +I F A +IF+ M
Sbjct: 250 --ALIRSLVNAYVKCGSLANAWKLHEGTKKRDLLSCTALITGFSQQNNCTSDAFDIFKDM 307
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
K D V + +L C V G + I ++ + LIDM ++G
Sbjct: 308 IRMKTKMDEVVVSSMLKICTTIASVTIGRQIHGFALKSSQIRFDVALGNSLIDMYAKSG- 366
Query: 453 LSEVEEYINKFHHLNDPVVLG--SLLSACRVHGN 484
E+E+ + F + + V SL++ HGN
Sbjct: 367 --EIEDAVLAFEEMKEKDVRSWTSLIAGYGRHGN 398
>AT5G13230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4222514-4224982 FORWARD
LENGTH=822
Length = 822
Score = 308 bits (790), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 288/528 (54%), Gaps = 6/528 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH+ ++K+G S+ FV L+N Y CG V AR VF+G+ ++ V W+ ++S Y + G
Sbjct: 168 LHSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGY 227
Query: 81 HWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+L L S M++ +PN + F + L A L A + +HG L++ Y V
Sbjct: 228 FEDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVG 287
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ +Y + G SDA V+ + V ++ +I+ F +N + ++F M + VP+
Sbjct: 288 LLQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVDLFIRMREAFVVPN 347
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
F+ +L G LH VK+ D + N ++ +YA+ ++ V++F
Sbjct: 348 EFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFA 407
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM-NECSIRPDDFTFASILASCTWHASF 316
+ K+ +SWNT+I + + + GK+F F+E + N+ S+ + TF+S L +C AS
Sbjct: 408 ELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVT--EVTFSSALGACASLASM 465
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
G Q+H +T V V N+L++MYAKCG I +A VF++M ++ SWN +I+ +
Sbjct: 466 DLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGY 525
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
HGLG +A+ I + MK KP+ +TF G+L C+++G++ +G F SM +GI P
Sbjct: 526 STHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPC 585
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
+ H++C++ +LGR+G+L + + I + ++ ++LSA N R A+ +L
Sbjct: 586 LEHYTCMVRLLGRSGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEIL 645
Query: 497 EVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
++ P + YVL+SN+YA W V S RK +K G++KEPG +W++
Sbjct: 646 KINPKDEATYVLVSNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIE 693
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/486 (28%), Positives = 227/486 (46%), Gaps = 18/486 (3%)
Query: 7 GTLLQRC----SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
G +L+RC +H +LK G +F +N LLN YVK G A +FD M E
Sbjct: 53 GAMLRRCIQKNDPISAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEMPE 112
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEF---VFASTLSACASLRALVQGQQI 119
RN VS+ + GY C + + L+S++ +E VF S L SL +
Sbjct: 113 RNNVSFVTLAQGY-ACQD---PIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWL 168
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEP 179
H ++ GY S +FV +LI Y CG A +V+ + + V + ++S +VEN
Sbjct: 169 HSPIVKLGYDSNAFVGAALINAYSVCGSVDSARTVFEGILCKDIVVWAGIVSCYVENGYF 228
Query: 180 EKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVI 239
E ++ M GF+P+ ++F L S L F +H Q +K P +G +
Sbjct: 229 EDSLKLLSCMRMAGFMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGL 288
Query: 240 MSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--FDDQGKSFLFFKEMMNECSIR 297
+ +Y Q + + +VF + DV+ W+ +I F F ++ LF + M E +
Sbjct: 289 LQLYTQLGDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNEAVD-LFIR--MREAFVV 345
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
P++FT +SIL C G+Q+H + + D+ V NAL+++YAKC + A K+
Sbjct: 346 PNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKL 405
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
F+++S +N +SWNT+I + N G G +A +F + V VTF+ L AC +
Sbjct: 406 FAELSSKNEVSWNTVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASM 465
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
G + + + A + + LIDM + G + + N+ + D +L+S
Sbjct: 466 DLG-VQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETI-DVASWNALIS 523
Query: 478 ACRVHG 483
HG
Sbjct: 524 GYSTHG 529
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 151/342 (44%), Gaps = 15/342 (4%)
Query: 77 QCG--EHWMALHLFSQMKVLP--NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
QCG AL L S ++P + + + L C + + IH L+ G
Sbjct: 25 QCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKAIHCDILKKGSCLDL 84
Query: 133 FVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE 192
F +N L+ Y+K G DAL+++ N+VS+ L G+ + ++ + +E
Sbjct: 85 FATNILLNAYVKAGFDKDALNLFDEMPERNNVSFVTLAQGYA----CQDPIGLYSRLHRE 140
Query: 193 GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
G + F L +LD LH VKL D +G +++ Y+ ++
Sbjct: 141 GHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGYDSNAFVGAALINAYSVCGSVDSA 200
Query: 253 VRVFRLIQDKDVISWNTLINAF---SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
VF I KD++ W +++ + +F+D L M P+++TF + L +
Sbjct: 201 RTVFEGILCKDIVVWAGIVSCYVENGYFEDS----LKLLSCMRMAGFMPNNYTFDTALKA 256
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
+F K +H + +T D V L+ +Y + G + A KVF++M +++ W
Sbjct: 257 SIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQLGDMSDAFKVFNEMPKNDVVPW 316
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
+ MIA F +G A+++F +M+ V P+ T + +L C
Sbjct: 317 SFMIARFCQNGFCNEAVDLFIRMREAFVVPNEFTLSSILNGC 358
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 56/117 (47%), Gaps = 3/117 (2%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
+G S + +H +K V VSN L++MY KCG + A+ VF+ M +
Sbjct: 455 ALGACASLASMDLGVQVHGLAIKTNNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETID 514
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQ 118
SW+A+ISGY G AL + MK PN F LS C++ + QGQ+
Sbjct: 515 VASWNALISGYSTHGLGRQALRILDIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQE 571
>AT2G36980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15531161-15533038 FORWARD
LENGTH=625
Length = 625
Score = 308 bits (790), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 183/571 (32%), Positives = 286/571 (50%), Gaps = 73/571 (12%)
Query: 46 KCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFAS 102
K GR+ AR+VFDGM E +TV+W+ M++ Y + G H A+ LF+Q++ P+++ F +
Sbjct: 16 KSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFTA 75
Query: 103 TLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ-----------CSD- 150
LS CASL + G++I L +RSG+ + V+NSLI MY KC C D
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 151 ---------------------ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
AL V+ + ++N +ISG + E +FK M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 190 LQEGFVPDRFSFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
L+ F PD ++F L+ S + + G +H +K N ++S Y +
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 249 IEEVVR-------------------------------VFRLIQDKDVISWNTLINAFSHF 277
++ +R VF L +K++++W T+I +
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
D ++ FF EMM + D F + ++L +C+ A HGK IH L V
Sbjct: 316 GDGEQALRFFVEMMKS-GVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYV 374
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
NALVN+YAKCG I A + F ++ ++L+SWNTM+ AFG HGL ++A+++++ M A G+
Sbjct: 375 GNALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIASGI 434
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
KPD+VTF GLL C+HSG+V +G + F SM Y I + H +C+IDM GR G L+E +
Sbjct: 435 KPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
Query: 458 EYINKFHHL----NDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLY 513
+ + L ++ +LL AC H + +G ++K+L P +VLLSNLY
Sbjct: 495 DLATTYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLKIAEPSEEMSFVLLSNLY 554
Query: 514 ASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
S G W E R+ + G++K PG +W++
Sbjct: 555 CSTGRWKEGEDVRREMVERGMKKTPGCSWIE 585
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 110/465 (23%), Positives = 203/465 (43%), Gaps = 83/465 (17%)
Query: 9 LLQRCSK--TMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM--SE 62
+L C+ + FG + + V++ G + + V+N L++MY KC + A KVF M
Sbjct: 76 ILSTCASLGNVKFGRKIQSLVIRSGFCASLPVNNSLIDMYGKCSDTLSANKVFRDMCCDS 135
Query: 63 RNTVSWSA-------------------------------MISGYDQCGEHWMALHLFSQM 91
RN V+W + MISG+ CG+ L LF +M
Sbjct: 136 RNEVTWCSLLFAYMNAEQFEAALDVFVEMPKRVAFAWNIMISGHAHCGKLESCLSLFKEM 195
Query: 92 ---KVLPNEFVFASTLSAC-ASLRALVQGQQIHGLSLRSGYASISFVSNSLITMY----- 142
+ P+ + F+S ++AC A +V G+ +H + L++G++S NS+++ Y
Sbjct: 196 LESEFKPDCYTFSSLMNACSADSSNVVYGRMVHAVMLKNGWSSAVEAKNSVLSFYTKLGS 255
Query: 143 --------------------------MKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
MK G+ AL V+ + N V++ +I+G+ N
Sbjct: 256 RDDAMRELESIEVLTQVSWNSIIDACMKIGETEKALEVFHLAPEKNIVTWTTMITGYGRN 315
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
+ E+ F M++ G D F++ +L + L G +H + +G
Sbjct: 316 GDGEQALRFFVEMMKSGVDSDHFAYGAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVG 375
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
N ++++YA+ I+E R F I +KD++SWNT++ AF ++ + M+ I
Sbjct: 376 NALVNLYAKCGDIKEADRAFGDIANKDLVSWNTMLFAFGVHGLADQALKLYDNMIAS-GI 434
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRT-RQYWDVGVHNALVNMYAKCGSIGYAH 355
+PD+ TF +L +C+ G I + + R +V +++M+ + G + A
Sbjct: 435 KPDNVTFIGLLTTCSHSGLVEEGCMIFESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAK 494
Query: 356 KVFSKMSYRNLI-------SWNTMIAAFGNHGLGERAIEIFEQMK 393
+ + +Y +L+ SW T++ A H E E+ + +K
Sbjct: 495 DLAT--TYSSLVTDSSNNSSWETLLGACSTHWHTELGREVSKVLK 537
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 14/240 (5%)
Query: 7 GTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
G +L CS G +H ++ G Q + +V N L+N+Y KCG + A + F ++
Sbjct: 341 GAVLHACSGLALLGHGKMIHGCLIHCGFQGYAYVGNALVNLYAKCGDIKEADRAFGDIAN 400
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQI 119
++ VSW+ M+ + G AL L+ M + P+ F L+ C+ + +G I
Sbjct: 401 KDLVSWNTMLFAFGVHGLADQALKLYDNMIASGIKPDNVTFIGLLTTCSHSGLVEEGCMI 460
Query: 120 HGLSLRSGYASISFVS-NSLITMYMKCG---QCSDALSVYANSV--GTNSVSYNALISGF 173
++ + +I M+ + G + D + Y++ V +N+ S+ L+
Sbjct: 461 FESMVKDYRIPLEVDHVTCMIDMFGRGGHLAEAKDLATTYSSLVTDSSNNSSWETLLGAC 520
Query: 174 VENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP 233
+ E G EV K+ L+ + SFV L + ++ G + + V+ + TP
Sbjct: 521 STHWHTELGREVSKV-LKIAEPSEEMSFVLLSNLYCSTGRWKEGEDVRREMVERGMKKTP 579
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 1/104 (0%)
Query: 346 AKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
AK G I A +VF M + ++WNTM+ ++ GL + AI +F Q++ KPD +FT
Sbjct: 15 AKSGRIASARQVFDGMPELDTVAWNTMLTSYSRLGLHQEAIALFTQLRFSDAKPDDYSFT 74
Query: 406 GLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGR 449
+L C G V+ G S+ G ++ + LIDM G+
Sbjct: 75 AILSTCASLGNVKFGR-KIQSLVIRSGFCASLPVNNSLIDMYGK 117
>AT2G29760.1 | Symbols: OTP81 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:12712884-12715100 FORWARD
LENGTH=738
Length = 738
Score = 308 bits (789), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 168/570 (29%), Positives = 295/570 (51%), Gaps = 38/570 (6%)
Query: 8 TLLQRC-SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVL--ARKVFDGMSERN 64
+L++RC S H +++ G S + +++L M L ARKVFD + + N
Sbjct: 35 SLIERCVSLRQLKQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPN 94
Query: 65 TVSWSAMI----SGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH 120
+ +W+ +I SG D W L + S+ + PN++ F + A A + +L GQ +H
Sbjct: 95 SFAWNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLH 154
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
G++++S S FV+NSLI Y CG A V+ + VS+N++I+GFV+ P+
Sbjct: 155 GMAVKSAVGSDVFVANSLIHCYFSCGDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPD 214
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
K E+FK M E + VG+L + + G + + ++ + N ++
Sbjct: 215 KALELFKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAML 274
Query: 241 SMYAQFNFIEEVVRVFRLIQDKD-------------------------------VISWNT 269
MY + IE+ R+F +++KD +++WN
Sbjct: 275 DMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNA 334
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
LI+A+ ++ + F E+ + +++ + T S L++C + G+ IH+++ +
Sbjct: 335 LISAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKH 394
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
+ V +AL++MY+KCG + + +VF+ + R++ W+ MI HG G A+++F
Sbjct: 395 GIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMF 454
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGR 449
+M+ VKP+ VTFT + AC+H+G+V + + F+ ME+ YGI P H++C++D+LGR
Sbjct: 455 YKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGR 514
Query: 450 AGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLL 509
+G L + ++I V G+LL AC++H N+ + E LLE+ P +VLL
Sbjct: 515 SGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLL 574
Query: 510 SNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
SN+YA G W V+ RK ++ +GL+KEPG
Sbjct: 575 SNIYAKLGKWENVSELRKHMRVTGLKKEPG 604
>AT3G13880.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4572180-4574426 FORWARD
LENGTH=748
Length = 748
Score = 307 bits (787), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 173/544 (31%), Positives = 293/544 (53%), Gaps = 12/544 (2%)
Query: 11 QRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSA 70
+RC + LH V+ GL VF+ N L++MY KCG++ A +FD ER+ VSW++
Sbjct: 160 ERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNS 219
Query: 71 MISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACA-SLRA--LVQGQQIHGLSL 124
+ISGY + G L+L ++M + + S L AC +L + +G IH +
Sbjct: 220 LISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTA 279
Query: 125 RSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE--PEKG 182
+ G V +L+ MY K G +A+ +++ N V+YNA+ISGF++ E E
Sbjct: 280 KLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEAS 339
Query: 183 FEVFKL---MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVI 239
E FKL M + G P +F +L + G +H K IG+ +
Sbjct: 340 SEAFKLFMDMQRRGLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNFQSDEFIGSAL 399
Query: 240 MSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
+ +YA E+ ++ F +D+ SW ++I+ + +F F+++ + IRP+
Sbjct: 400 IELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQLFSS-HIRPE 458
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
++T + ++++C A+ G+QI + ++ V + ++MYAK G++ A++VF
Sbjct: 459 EYTVSLMMSACADFAALSSGEQIQGYAIKSGIDAFTSVKTSSISMYAKSGNMPLANQVFI 518
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
++ ++ +++ MI++ HG A+ IFE MK G+KP+ F G+LIAC H G+V +
Sbjct: 519 EVQNPDVATYSAMISSLAQHGSANEALNIFESMKTHGIKPNQQAFLGVLIACCHGGLVTQ 578
Query: 420 GDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSAC 479
G YF M+ Y I PN HF+CL+D+LGR GRLS+ E I + PV +LLS+C
Sbjct: 579 GLKYFQCMKNDYRINPNEKHFTCLVDLLGRTGRLSDAENLILSSGFQDHPVTWRALLSSC 638
Query: 480 RVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
RV+ + IG+R+A+ L+E+ P + YVLL N+Y G+ + R++++ G++KEP
Sbjct: 639 RVYKDSVIGKRVAERLMELEPEASGSYVLLHNIYNDSGVNSSAEEVRELMRDRGVKKEPA 698
Query: 540 YAWL 543
+W+
Sbjct: 699 LSWI 702
Score = 193 bits (490), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 121/457 (26%), Positives = 231/457 (50%), Gaps = 22/457 (4%)
Query: 43 MYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFV 99
MY KC + AR++FD M ERN +S++++ISGY Q G + A+ LF + + + ++F
Sbjct: 91 MYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLDKFT 150
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV 159
+A L C L G+ +HGL + +G + F+ N LI MY KCG+ A+S++
Sbjct: 151 YAGALGFCGERCDLDLGELLHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLFDRCD 210
Query: 160 GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLDD--FRT 216
+ VS+N+LISG+V E+ + M ++G ++ +L NL++
Sbjct: 211 ERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEGFIEK 270
Query: 217 GMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH 276
GM++HC KL ++ ++ ++ MYA+ ++E +++F L+ K+V+++N +I+ F
Sbjct: 271 GMAIHCYTAKLGMEFDIVVRTALLDMYAKNGSLKEAIKLFSLMPSKNVVTYNAMISGFLQ 330
Query: 277 FDD-----QGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
D+ ++F F +M + P TF+ +L +C+ + +G+QIHA + +
Sbjct: 331 MDEITDEASSEAFKLFMDMQRR-GLEPSPSTFSVVLKACSAAKTLEYGRQIHALICKNNF 389
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQ 391
D + +AL+ +YA GS + F+ S +++ SW +MI + E A ++F Q
Sbjct: 390 QSDEFIGSALIELYALMGSTEDGMQCFASTSKQDIASWTSMIDCHVQNEQLESAFDLFRQ 449
Query: 392 MKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL----IDML 447
+ + ++P+ T + ++ AC + G+ Y I I F+ + I M
Sbjct: 450 LFSSHIRPEEYTVSLMMSACADFAALSSGEQI-----QGYAIKSGIDAFTSVKTSSISMY 504
Query: 448 GRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
++G + + + + D +++S+ HG+
Sbjct: 505 AKSGNMPLANQVFIEVQN-PDVATYSAMISSLAQHGS 540
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 156/317 (49%), Gaps = 9/317 (2%)
Query: 112 ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALIS 171
++V G+ HG ++S ++ N+L+ MY KC + A ++ N +S+N+LIS
Sbjct: 62 SVVLGKLAHGHMIKSSLNPCLYLLNNLLNMYCKCRELGFARQLFDRMPERNIISFNSLIS 121
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
G+ + E+ E+F + D+F++ G LGF D G LH V L
Sbjct: 122 GYTQMGFYEQAMELFLEAREANLKLDKFTYAGALGFCGERCDLDLGELLHGLVVVNGLSQ 181
Query: 232 TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM 291
+ NV++ MY++ +++ + +F ++D +SWN+LI+ + + +M
Sbjct: 182 QVFLINVLIDMYSKCGKLDQAMSLFDRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMH 241
Query: 292 NECSIRPDDFTFASILASC--TWHASFLH-GKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
+ + + S+L +C + F+ G IH + + +D+ V AL++MYAK
Sbjct: 242 RD-GLNLTTYALGSVLKACCINLNEGFIEKGMAIHCYTAKLGMEFDIVVRTALLDMYAKN 300
Query: 349 GSIGYAHKVFSKMSYRNLISWNTMIAAFGN-----HGLGERAIEIFEQMKAEGVKPDSVT 403
GS+ A K+FS M +N++++N MI+ F A ++F M+ G++P T
Sbjct: 301 GSLKEAIKLFSLMPSKNVVTYNAMISGFLQMDEITDEASSEAFKLFMDMQRRGLEPSPST 360
Query: 404 FTGLLIACNHSGMVRKG 420
F+ +L AC+ + + G
Sbjct: 361 FSVVLKACSAAKTLEYG 377
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 122/282 (43%), Gaps = 45/282 (15%)
Query: 281 GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA 340
G + F + + D + + + S + GK H + ++ + + N
Sbjct: 28 GLGYRFLSSLCQPKNTALDSEGYKILFQTAAKSGSVVLGKLAHGHMIKSSLNPCLYLLNN 87
Query: 341 LVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
L+NMY KC +G+A ++F +M RN+IS+N++I+ + G E+A+E+F + + +K D
Sbjct: 88 LLNMYCKCRELGFARQLFDRMPERNIISFNSLISGYTQMGFYEQAMELFLEAREANLKLD 147
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE----- 455
T+ G L C + G+L + + G++ + + LIDM + G+L +
Sbjct: 148 KFTYAGALGFCGERCDLDLGEL-LHGLVVVNGLSQQVFLINVLIDMYSKCGKLDQAMSLF 206
Query: 456 -----------------------VEEYIN---KFHH--LN-DPVVLGSLLSACRVHGN-- 484
EE +N K H LN LGS+L AC ++ N
Sbjct: 207 DRCDERDQVSWNSLISGYVRVGAAEEPLNLLAKMHRDGLNLTTYALGSVLKACCINLNEG 266
Query: 485 -----MAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNE 521
MAI AKL +E V + L ++YA +G E
Sbjct: 267 FIEKGMAIHCYTAKLGMEFDIVVRTA---LLDMYAKNGSLKE 305
>AT3G49740.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18447788-18450001 FORWARD
LENGTH=737
Length = 737
Score = 306 bits (783), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 185/550 (33%), Positives = 302/550 (54%), Gaps = 19/550 (3%)
Query: 7 GTLLQRCS-KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD--GMS 61
T+L C ++ FG +H+ V+K G V N L+ MY C VV A VF+ ++
Sbjct: 194 ATILSMCDYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVA 253
Query: 62 ERNTVSWSAMISGYD--QCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQI 119
R+ V+++ +I G + E + + + P + F S + +C+ G Q+
Sbjct: 254 VRDQVTFNVVIDGLAGFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCS---CAAMGHQV 310
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEP 179
HGL++++GY + VSN+ +TMY A V+ + + V++N +IS + +
Sbjct: 311 HGLAIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLG 370
Query: 180 EKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVI 239
+ V+K M G PD F+F LL S +LD M C +K L I N +
Sbjct: 371 KSAMSVYKRMHIIGVKPDEFTFGSLLATSLDLDVLE--MVQAC-IIKFGLSSKIEISNAL 427
Query: 240 MSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--FDDQGKSFLFFKEMMNECSIR 297
+S Y++ IE+ +F K++ISWN +I+ F H F +G F + +E I
Sbjct: 428 ISAYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLE-RFSCLLESEVRIL 486
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
PD +T +++L+ C +S + G Q HA++ R Q+ + + NAL+NMY++CG+I + +V
Sbjct: 487 PDAYTLSTLLSICVSTSSLMLGSQTHAYVLRHGQFKETLIGNALINMYSQCGTIQNSLEV 546
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGM 416
F++MS ++++SWN++I+A+ HG GE A+ ++ M+ EG V PD+ TF+ +L AC+H+G+
Sbjct: 547 FNQMSEKDVVSWNSLISAYSRHGEGENAVNTYKTMQDEGKVIPDAATFSAVLSACSHAGL 606
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHL--NDPVVLGS 474
V +G FNSM +G+ N+ HFSCL+D+LGRAG L E E + + V +
Sbjct: 607 VEEGLEIFNSMVEFHGVIRNVDHFSCLVDLLGRAGHLDEAESLVKISEKTIGSRVDVWWA 666
Query: 475 LLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGL 534
L SAC HG++ +G+ +AKLL+E S YV LSN+YA GMW E R+ + G
Sbjct: 667 LFSACAAHGDLKLGKMVAKLLMEKEKDDPSVYVQLSNIYAGAGMWKEAEETRRAINMIGA 726
Query: 535 RKEPGYAWLK 544
K+ G +W++
Sbjct: 727 MKQRGCSWMR 736
Score = 182 bits (463), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 147/509 (28%), Positives = 243/509 (47%), Gaps = 62/509 (12%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMY-------------------------------VKCGR 49
+H ++ GL H VSN LL++Y K G
Sbjct: 79 VHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGD 138
Query: 50 VVLARKVFDGMSERNTVS-WSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLS 105
+ A +VFD M ER+ V+ W+AMI+G + G H ++ LF +M V ++F FA+ LS
Sbjct: 139 IEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILS 198
Query: 106 ACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS--VGTNS 163
C +L G+Q+H L +++G+ S V N+LITMY C DA V+ + +
Sbjct: 199 MC-DYGSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQ 257
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
V++N +I G + ++ VF+ ML+ P +FV ++G + G +H
Sbjct: 258 VTFNVVIDGLA-GFKRDESLLVFRKMLEASLRPTDLTFVSVMGSCSCA---AMGHQVHGL 313
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
A+K + L+ N M+MY+ F +VF +++KD+++WNT+I++++ GKS
Sbjct: 314 AIKTGYEKYTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQ-AKLGKS 372
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
+ + M+ ++PD+FTF S+LA+ + L + + A + + + + NAL++
Sbjct: 373 AMSVYKRMHIIGVKPDEFTFGSLLAT-SLDLDVL--EMVQACIIKFGLSSKIEISNALIS 429
Query: 344 MYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK--PDS 401
Y+K G I A +F + +NLISWN +I+ F ++G +E F + V+ PD+
Sbjct: 430 AYSKNGQIEKADLLFERSLRKNLISWNAIISGFYHNGFPFEGLERFSCLLESEVRILPDA 489
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHF------SCLIDMLGRAGRLSE 455
T + LL C V L S AY + G F + LI+M + G +
Sbjct: 490 YTLSTLLSIC-----VSTSSLMLGSQTHAYVLRH--GQFKETLIGNALINMYSQCGTIQN 542
Query: 456 VEEYINKFHHLNDPVVLGSLLSACRVHGN 484
E N+ D V SL+SA HG
Sbjct: 543 SLEVFNQMSE-KDVVSWNSLISAYSRHGE 570
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 44/375 (11%)
Query: 72 ISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSG 127
++G + GE+ AL LF+ + + P+++ + ++ LR + G Q+H ++RSG
Sbjct: 28 LTGLTRSGENRNALKLFADVHRCTTLRPDQYSVSLAITTARHLRDTIFGGQVHCYAIRSG 87
Query: 128 YASISFVSNSLITMYMKCGQCS---------DALSVY------ANSVGTNSVSY------ 166
S VSN+L+++Y + G + D VY + S + Y
Sbjct: 88 LLCHSHVSNTLLSLYERLGNLASLKKKFDEIDEPDVYSWTTLLSASFKLGDIEYAFEVFD 147
Query: 167 -----------NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFR 215
NA+I+G E+ E E+F+ M + G D+F F +L +
Sbjct: 148 KMPERDDVAIWNAMITGCKESGYHETSVELFREMHKLGVRHDKFGFATILSM-CDYGSLD 206
Query: 216 TGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRL--IQDKDVISWNTLINA 273
G +H +K + N +++MY + + VF + +D +++N +I+
Sbjct: 207 FGKQVHSLVIKAGFFIASSVVNALITMYFNCQVVVDACLVFEETDVAVRDQVTFNVVIDG 266
Query: 274 FSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW 333
+ F + +S L F++M+ E S+RP D TF S++ SC+ A G Q+H +T
Sbjct: 267 LAGF-KRDESLLVFRKML-EASLRPTDLTFVSVMGSCSCAA---MGHQVHGLAIKTGYEK 321
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK 393
V NA + MY+ G AHKVF + ++L++WNTMI+++ LG+ A+ ++++M
Sbjct: 322 YTLVSNATMTMYSSFEDFGAAHKVFESLEEKDLVTWNTMISSYNQAKLGKSAMSVYKRMH 381
Query: 394 AEGVKPDSVTFTGLL 408
GVKPD TF LL
Sbjct: 382 IIGVKPDEFTFGSLL 396
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 140/309 (45%), Gaps = 38/309 (12%)
Query: 143 MKCGQC-SDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ-EGFVPDRFS 200
M+ C +++LS A + T ++ N ++G + E ++F + + PD++S
Sbjct: 1 MRKALCLTESLSAIAEN-STTLLNLNRRLTGLTRSGENRNALKLFADVHRCTTLRPDQYS 59
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
+ + +L D G +HC A++ L C + N ++S+Y + + + + F I
Sbjct: 60 VSLAITTARHLRDTIFGGQVHCYAIRSGLLCHSHVSNTLLSLYERLGNLASLKKKFDEID 119
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEM------------------------------ 290
+ DV SW TL++A D +F F +M
Sbjct: 120 EPDVYSWTTLLSASFKLGDIEYAFEVFDKMPERDDVAIWNAMITGCKESGYHETSVELFR 179
Query: 291 -MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
M++ +R D F FA+IL+ C + S GKQ+H+ + + + V NAL+ MY C
Sbjct: 180 EMHKLGVRHDKFGFATILSMCDY-GSLDFGKQVHSLVIKAGFFIASSVVNALITMYFNCQ 238
Query: 350 SIGYAHKVF--SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGL 407
+ A VF + ++ R+ +++N +I E ++ +F +M ++P +TF +
Sbjct: 239 VVVDACLVFEETDVAVRDQVTFNVVIDGLAGFKRDE-SLLVFRKMLEASLRPTDLTFVSV 297
Query: 408 LIACNHSGM 416
+ +C+ + M
Sbjct: 298 MGSCSCAAM 306
>AT1G71420.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26917822-26920059 REVERSE
LENGTH=745
Length = 745
Score = 305 bits (782), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 175/526 (33%), Positives = 289/526 (54%), Gaps = 27/526 (5%)
Query: 33 HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM- 91
+V ++N L+NMY KCG ++ AR+VFD M ERN VSW+A+I+GY Q G LFS M
Sbjct: 95 NVILANFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSML 154
Query: 92 -KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC---GQ 147
PNEF +S L++C G+Q+HGL+L+ G +V+N++I+MY +C
Sbjct: 155 SHCFPNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAA 210
Query: 148 CSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGF 207
+A +V+ N V++N++I+ F + +K VF M +G DR + + +
Sbjct: 211 AYEAWTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSS 270
Query: 208 STNLDDF------RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD 261
D + + LH VK L + ++ +Y++ +E+ ++L +
Sbjct: 271 LYKSSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEM--LEDYTDCYKLFME 328
Query: 262 ----KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+D+++WN +I AF+ +D + ++ F ++ E + PD +TF+S+L +C +
Sbjct: 329 MSHCRDIVAWNGIITAFAVYDPE-RAIHLFGQLRQE-KLSPDWYTFSSVLKACAGLVTAR 386
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
H IHA + + D ++N+L++ YAKCGS+ +VF M R+++SWN+M+ A+
Sbjct: 387 HALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYS 446
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
HG + + +F++M + PDS TF LL AC+H+G V +G F SM P +
Sbjct: 447 LHGQVDSILPVFQKMD---INPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQL 503
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
H++C+IDML RA R +E EE I + D VV +LL +CR HGN +G+ A L E
Sbjct: 504 NHYACVIDMLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKE 563
Query: 498 -VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAW 542
V P + Y+ +SN+Y ++G +NE + K ++ +RKEP +W
Sbjct: 564 LVEPTNSMSYIQMSNIYNAEGSFNEANLSIKEMETWRVRKEPDLSW 609
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 110/450 (24%), Positives = 214/450 (47%), Gaps = 41/450 (9%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKC---GRVVLARKVFDGMS 61
T+ ++L C +H LK+GL ++V+N +++MY +C A VF+ +
Sbjct: 163 TLSSVLTSCRYEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEAWTVFEAIK 222
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASL---RALVQGQ- 117
+N V+W++MI+ + C A+ +F +M F A+ L+ C+SL LV +
Sbjct: 223 FKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSDGVGFDRATLLNICSSLYKSSDLVPNEV 282
Query: 118 -----QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN--------SVGTNSV 164
Q+H L+++SG + + V+ +LI +Y S+ L Y + S + V
Sbjct: 283 SKCCLQLHSLTVKSGLVTQTEVATALIKVY------SEMLEDYTDCYKLFMEMSHCRDIV 336
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQA 224
++N +I+ F ++PE+ +F + QE PD ++F +L L R +S+H Q
Sbjct: 337 AWNGIITAFAV-YDPERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIHAQV 395
Query: 225 VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSF 284
+K ++ N ++ YA+ ++ +RVF + +DV+SWN+++ A+S
Sbjct: 396 IKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSIL 455
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA-LVN 343
F++M I PD TF ++L++C+ G +I +F + H A +++
Sbjct: 456 PVFQKM----DINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKPETLPQLNHYACVID 511
Query: 344 MYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG---LGERAIEIFEQMKAEGVKP 399
M ++ A +V +M + + W ++ + HG LG+ A + +++ V+P
Sbjct: 512 MLSRAERFAEAEEVIKQMPMDPDAVVWIALLGSCRKHGNTRLGKLAADKLKEL----VEP 567
Query: 400 -DSVTFTGLLIACNHSGMVRKGDLYFNSME 428
+S+++ + N G + +L ME
Sbjct: 568 TNSMSYIQMSNIYNAEGSFNEANLSIKEME 597
Score = 132 bits (332), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 214/465 (46%), Gaps = 51/465 (10%)
Query: 79 GEHWMALHLFSQMKV-LPNEFVFASTLSACASLRALVQGQQIHG--LSLRSGYASISFVS 135
G+ A+ LF V L ++ +A+ ACA R L+ G +H LS Y+ ++
Sbjct: 40 GDIRRAVSLFYSAPVELQSQQAYAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVILA 99
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
N LI MY KCG A V+ N VS+ ALI+G+V+ ++GF +F ML F
Sbjct: 100 NFLINMYAKCGNILYARQVFDTMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCF- 158
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN---FIEEV 252
P+ F+ +L + G +H A+KL L C+ + N ++SMY + + E
Sbjct: 159 PNEFTLSSVLTSCR----YEPGKQVHGLALKLGLHCSIYVANAVISMYGRCHDGAAAYEA 214
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
VF I+ K++++WN++I AF + K+ F M ++ + D T +I +S
Sbjct: 215 WTVFEAIKFKNLVTWNSMIAAFQCCNLGKKAIGVFMRMHSD-GVGFDRATLLNICSSLYK 273
Query: 313 HASFLHGK------QIHAFLFRTRQYWDVGVHNALVNMYAK-CGSIGYAHKVFSKMSY-R 364
+ + + Q+H+ ++ V AL+ +Y++ +K+F +MS+ R
Sbjct: 274 SSDLVPNEVSKCCLQLHSLTVKSGLVTQTEVATALIKVYSEMLEDYTDCYKLFMEMSHCR 333
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN-----------H 413
++++WN +I AF + ERAI +F Q++ E + PD TF+ +L AC H
Sbjct: 334 DIVAWNGIITAFAVYD-PERAIHLFGQLRQEKLSPDWYTFSSVLKACAGLVTARHALSIH 392
Query: 414 SGMVRKG----DLYFNSMEAAYGI---------------APNIGHFSCLIDMLGRAGRLS 454
+ +++ G + NS+ AY + ++ ++ ++ G++
Sbjct: 393 AQVIKGGFLADTVLNNSLIHAYAKCGSLDLCMRVFDDMDSRDVVSWNSMLKAYSLHGQVD 452
Query: 455 EVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVP 499
+ K D +LLSAC G + G R+ + + E P
Sbjct: 453 SILPVFQKMDINPDSATFIALLSACSHAGRVEEGLRIFRSMFEKP 497
>AT3G16610.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr3:5656371-5658335 REVERSE LENGTH=654
Length = 654
Score = 305 bits (781), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 184/534 (34%), Positives = 275/534 (51%), Gaps = 17/534 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H+ V + ++V L++ Y KCG + +A KVFD M +R+ V+W+AMISG+
Sbjct: 125 IHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLHCC 184
Query: 81 HWMALHLFSQMKVL----PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+ LF M+ + PN A AL +G+ +HG R G+++ V
Sbjct: 185 LTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVVKT 244
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
++ +Y K A V+ N V+++A+I G+VEN ++ EVF ML V
Sbjct: 245 GILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGEVFFQML----VN 300
Query: 197 DRFSFVG------LLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
D + V +L D G +HC AVK + N I+S YA++ +
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+ R F I KDVIS+N+LI +SF F EM IRPD T +L +C
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTS-GIRPDITTLLGVLTAC 419
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+ A+ HG H + + + NAL++MY KCG + A +VF M R+++SWN
Sbjct: 420 SHLAALGHGSSCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHKRDIVSWN 479
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM-EA 429
TM+ FG HGLG+ A+ +F M+ GV PD VT +L AC+HSG+V +G FNSM
Sbjct: 480 TMLFGFGIHGLGKEALSLFNSMQETGVNPDEVTLLAILSACSHSGLVDEGKQLFNSMSRG 539
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
+ + P I H++C+ D+L RAG L E +++NK D VLG+LLSAC + N +G
Sbjct: 540 DFNVIPRIDHYNCMTDLLARAGYLDEAYDFVNKMPFEPDIRVLGTLLSACWTYKNAELGN 599
Query: 490 RLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
++K + + TT VLLSN Y++ W + R + K GL K PGY+W+
Sbjct: 600 EVSKKMQSLGE-TTESLVLLSNTYSAAERWEDAARIRMIQKKRGLLKTPGYSWV 652
Score = 172 bits (436), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 130/491 (26%), Positives = 229/491 (46%), Gaps = 20/491 (4%)
Query: 8 TLLQRC--SKTMTFG--LHAAVLK--IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
+LL+ C S+ + G +H +LK + L S + N L +Y C V LAR VFD +
Sbjct: 4 SLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDEIP 62
Query: 62 ER--NTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
N ++W MI Y AL L+ +M V P ++ + L ACA LRA+ G
Sbjct: 63 HPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNSGVRPTKYTYPFVLKACAGLRAIDDG 122
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+ IH S +A+ +V +L+ Y KCG+ A+ V+ + V++NA+ISGF +
Sbjct: 123 KLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGFSLH 182
Query: 177 HEPEKGFEVFKLMLQ-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+F M + +G P+ + VG+ R G ++H ++ ++
Sbjct: 183 CCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREGKAVHGYCTRMGFSNDLVV 242
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH---FDDQGKSFLFFKEMMN 292
I+ +YA+ I RVF L K+ ++W+ +I + + G+ +FF+ ++N
Sbjct: 243 KTGILDVYAKSKCIIYARRVFDLDFKKNEVTWSAMIGGYVENEMIKEAGE--VFFQMLVN 300
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
+ IL C G+ +H + + D+ V N +++ YAK GS+
Sbjct: 301 DNVAMVTPVAIGLILMGCARFGDLSGGRCVHCYAVKAGFILDLTVQNTIISFYAKYGSLC 360
Query: 353 YAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
A + FS++ +++IS+N++I + E + +F +M+ G++PD T G+L AC+
Sbjct: 361 DAFRQFSEIGLKDVISYNSLITGCVVNCRPEESFRLFHEMRTSGIRPDITTLLGVLTACS 420
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL 472
H + G + +G A N + L+DM + G+L + + H D V
Sbjct: 421 HLAALGHGS-SCHGYCVVHGYAVNTSICNALMDMYTKCGKLDVAKRVFDTMHK-RDIVSW 478
Query: 473 GSLLSACRVHG 483
++L +HG
Sbjct: 479 NTMLFGFGIHG 489
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 113/225 (50%), Gaps = 7/225 (3%)
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVK--LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
F+ LL + G +H +K L L + ++ N + +YA N +E VF
Sbjct: 2 FLSLLETCIRSRNLVLGQVIHQHLLKRSLTLSSSTVLVN-LTRLYASCNEVELARHVFDE 60
Query: 259 IQDKDV--ISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
I + I+W+ +I A++ D K+ + +M+N +RP +T+ +L +C +
Sbjct: 61 IPHPRINPIAWDLMIRAYASNDFAEKALDLYYKMLNS-GVRPTKYTYPFVLKACAGLRAI 119
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
GK IH+ + + D+ V ALV+ YAKCG + A KVF +M R++++WN MI+ F
Sbjct: 120 DDGKLIHSHVNCSDFATDMYVCTALVDFYAKCGELEMAIKVFDEMPKRDMVAWNAMISGF 179
Query: 377 GNHGLGERAIEIFEQMKA-EGVKPDSVTFTGLLIACNHSGMVRKG 420
H I +F M+ +G+ P+ T G+ A +G +R+G
Sbjct: 180 SLHCCLTDVIGLFLDMRRIDGLSPNLSTIVGMFPALGRAGALREG 224
>AT1G16480.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625843-5628656 REVERSE
LENGTH=937
Length = 937
Score = 302 bits (774), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 278/529 (52%), Gaps = 5/529 (0%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
G+H V+K+G S V V N LL MY GR V A VF M ++ +SW+++++ + G
Sbjct: 282 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 341
Query: 80 EHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
AL L M N F S L+AC + +G+ +HGL + SG + N
Sbjct: 342 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 401
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+L++MY K G+ S++ V + V++NALI G+ E+ +P+K F+ M EG
Sbjct: 402 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 461
Query: 197 DRFSFVGLLGFSTNLDDF-RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
+ + V +L D G LH V + + N +++MYA+ + +
Sbjct: 462 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 521
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + ++++I+WN ++ A +H G+ L M + D F+F+ L++ A
Sbjct: 522 FNGLDNRNIITWNAMLAANAHHG-HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G+Q+H + D + NA +MY+KCG IG K+ R+L SWN +I+A
Sbjct: 581 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 640
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
G HG E F +M G+KP VTF LL AC+H G+V KG Y++ + +G+ P
Sbjct: 641 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 700
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
I H C+ID+LGR+GRL+E E +I+K + +V SLL++C++HGN+ G + A+ L
Sbjct: 701 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 760
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
++ P S YVL SN++A+ G W +V + RK + ++K+ +W+K
Sbjct: 761 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 809
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 225/443 (50%), Gaps = 20/443 (4%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
V+K GL+S + V N L++M G V A +FD MSER+T+SW+++ + Y Q G +
Sbjct: 186 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 245
Query: 85 LHLFSQMKVLPNEFVFASTLSACASLRALVQ----GQQIHGLSLRSGYASISFVSNSLIT 140
+FS M+ +E V ++T+S S+ V G+ IHGL ++ G+ S+ V N+L+
Sbjct: 246 FRIFSLMRRFHDE-VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 304
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
MY G+ +A V+ + +S+N+L++ FV + + M+ G + +
Sbjct: 305 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 364
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
F L D F G LH V L +IGN ++SMY + + E RV +
Sbjct: 365 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 424
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH-G 319
+DV++WN LI ++ +D K+ F+ M E + + T S+L++C L G
Sbjct: 425 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERG 483
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH 379
K +HA++ D V N+L+ MYAKCG + + +F+ + RN+I+WN M+AA +H
Sbjct: 484 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 543
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGH 439
G GE +++ +M++ GV D +F+ L A ++ +G + +G+A +G
Sbjct: 544 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-------QQLHGLAVKLGF 596
Query: 440 ------FSCLIDMLGRAGRLSEV 456
F+ DM + G + EV
Sbjct: 597 EHDSFIFNAAADMYSKCGEIGEV 619
Score = 191 bits (484), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 245/499 (49%), Gaps = 13/499 (2%)
Query: 5 TIGTLLQRCSKTMTF-----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
I +L+ C ++ + +H V K GL S V+VS +L++Y G V +RKVF+
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQG 116
M +RN VSW++++ GY GE + ++ M+ V NE + +S+C L+ G
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 179
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+QI G ++SG S V NSLI+M G A ++ +++S+N++ + + +N
Sbjct: 180 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 239
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
E+ F +F LM + + + LL ++D + G +H VK+ D +
Sbjct: 240 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 299
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
N ++ MYA E VF+ + KD+ISWN+L+ +F + D + L M
Sbjct: 300 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN-DGRSLDALGLLCSMISSGK 358
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
+ TF S LA+C F G+ +H + + +++ + NALV+MY K G + + +
Sbjct: 359 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 418
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
V +M R++++WN +I + ++A+ F+ M+ EGV + +T +L AC G
Sbjct: 419 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 478
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
+ + ++ + G + + LI M + G LS ++ N + N + ++L
Sbjct: 479 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN-IITWNAML 537
Query: 477 SACRVHGNMAIGERLAKLL 495
+A HG+ GE + KL+
Sbjct: 538 AANAHHGH---GEEVLKLV 553
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 204/421 (48%), Gaps = 14/421 (3%)
Query: 43 MYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFV 99
MY K GRV AR +FD M RN VSW+ M+SG + G + + F +M + P+ FV
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFV 60
Query: 100 FASTLSACASLRALV-QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
AS ++AC ++ +G Q+HG +SG S +VS +++ +Y G S + V+
Sbjct: 61 IASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEM 120
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
N VS+ +L+ G+ + EPE+ +++K M EG + S ++ L D G
Sbjct: 121 PDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGR 180
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS--- 275
+ Q VK L+ + N ++SM ++ +F + ++D ISWN++ A++
Sbjct: 181 QIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNG 240
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH-GKQIHAFLFRTRQYWD 334
H ++ + F + +E + T S L S H G+ IH + +
Sbjct: 241 HIEESFRIFSLMRRFHDEV-----NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSV 295
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA 394
V V N L+ MYA G A+ VF +M ++LISWN+++A+F N G A+ + M +
Sbjct: 296 VCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMIS 355
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
G + VTFT L AC KG + + + G+ N + L+ M G+ G +S
Sbjct: 356 SGKSVNYVTFTSALAACFTPDFFEKGRI-LHGLVVVSGLFYNQIIGNALVSMYGKIGEMS 414
Query: 455 E 455
E
Sbjct: 415 E 415
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 127/257 (49%), Gaps = 8/257 (3%)
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDF 301
MY +F ++ +F ++ ++ +SWNT+++ + FF++M + I+P F
Sbjct: 1 MYTKFGRVKPARHLFDIMPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSF 59
Query: 302 TFASILASCTWHAS-FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
AS++ +C S F G Q+H F+ ++ DV V A++++Y G + + KVF +
Sbjct: 60 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 119
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
M RN++SW +++ + + G E I+I++ M+ EGV + + + ++ +C G+++
Sbjct: 120 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDE 176
Query: 421 DL--YFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
L G+ + + LI MLG G + + YI D + S+ +A
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSIAAA 235
Query: 479 CRVHGNMAIGERLAKLL 495
+G++ R+ L+
Sbjct: 236 YAQNGHIEESFRIFSLM 252
>AT1G16480.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:5625742-5628605 REVERSE
LENGTH=928
Length = 928
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 172/529 (32%), Positives = 278/529 (52%), Gaps = 5/529 (0%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
G+H V+K+G S V V N LL MY GR V A VF M ++ +SW+++++ + G
Sbjct: 265 GIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDG 324
Query: 80 EHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
AL L M N F S L+AC + +G+ +HGL + SG + N
Sbjct: 325 RSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGN 384
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+L++MY K G+ S++ V + V++NALI G+ E+ +P+K F+ M EG
Sbjct: 385 ALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSS 444
Query: 197 DRFSFVGLLGFSTNLDDF-RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
+ + V +L D G LH V + + N +++MYA+ + +
Sbjct: 445 NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDL 504
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + ++++I+WN ++ A +H G+ L M + D F+F+ L++ A
Sbjct: 505 FNGLDNRNIITWNAMLAANAHHG-HGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G+Q+H + D + NA +MY+KCG IG K+ R+L SWN +I+A
Sbjct: 564 LEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISA 623
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
G HG E F +M G+KP VTF LL AC+H G+V KG Y++ + +G+ P
Sbjct: 624 LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEP 683
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
I H C+ID+LGR+GRL+E E +I+K + +V SLL++C++HGN+ G + A+ L
Sbjct: 684 AIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENL 743
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
++ P S YVL SN++A+ G W +V + RK + ++K+ +W+K
Sbjct: 744 SKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVK 792
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 225/443 (50%), Gaps = 20/443 (4%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
V+K GL+S + V N L++M G V A +FD MSER+T+SW+++ + Y Q G +
Sbjct: 169 VVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEES 228
Query: 85 LHLFSQMKVLPNEFVFASTLSACASLRALVQ----GQQIHGLSLRSGYASISFVSNSLIT 140
+FS M+ +E V ++T+S S+ V G+ IHGL ++ G+ S+ V N+L+
Sbjct: 229 FRIFSLMRRFHDE-VNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLR 287
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
MY G+ +A V+ + +S+N+L++ FV + + M+ G + +
Sbjct: 288 MYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVT 347
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
F L D F G LH V L +IGN ++SMY + + E RV +
Sbjct: 348 FTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMP 407
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH-G 319
+DV++WN LI ++ +D K+ F+ M E + + T S+L++C L G
Sbjct: 408 RRDVVAWNALIGGYAEDEDPDKALAAFQTMRVE-GVSSNYITVVSVLSACLLPGDLLERG 466
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH 379
K +HA++ D V N+L+ MYAKCG + + +F+ + RN+I+WN M+AA +H
Sbjct: 467 KPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHH 526
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGH 439
G GE +++ +M++ GV D +F+ L A ++ +G + +G+A +G
Sbjct: 527 GHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEG-------QQLHGLAVKLGF 579
Query: 440 ------FSCLIDMLGRAGRLSEV 456
F+ DM + G + EV
Sbjct: 580 EHDSFIFNAAADMYSKCGEIGEV 602
Score = 190 bits (483), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/499 (27%), Positives = 245/499 (49%), Gaps = 13/499 (2%)
Query: 5 TIGTLLQRCSKTMTF-----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
I +L+ C ++ + +H V K GL S V+VS +L++Y G V +RKVF+
Sbjct: 43 VIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEE 102
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQG 116
M +RN VSW++++ GY GE + ++ M+ V NE + +S+C L+ G
Sbjct: 103 MPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLG 162
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+QI G ++SG S V NSLI+M G A ++ +++S+N++ + + +N
Sbjct: 163 RQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQN 222
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
E+ F +F LM + + + LL ++D + G +H VK+ D +
Sbjct: 223 GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVC 282
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
N ++ MYA E VF+ + KD+ISWN+L+ +F + D + L M
Sbjct: 283 NTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVN-DGRSLDALGLLCSMISSGK 341
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
+ TF S LA+C F G+ +H + + +++ + NALV+MY K G + + +
Sbjct: 342 SVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRR 401
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
V +M R++++WN +I + ++A+ F+ M+ EGV + +T +L AC G
Sbjct: 402 VLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGD 461
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
+ + ++ + G + + LI M + G LS ++ N + N + ++L
Sbjct: 462 LLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRN-IITWNAML 520
Query: 477 SACRVHGNMAIGERLAKLL 495
+A HG+ GE + KL+
Sbjct: 521 AANAHHGH---GEEVLKLV 536
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 193/404 (47%), Gaps = 14/404 (3%)
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALV-Q 115
M RN VSW+ M+SG + G + + F +M + P+ FV AS ++AC ++ +
Sbjct: 1 MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G Q+HG +SG S +VS +++ +Y G S + V+ N VS+ +L+ G+ +
Sbjct: 61 GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSD 120
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
EPE+ +++K M EG + S ++ L D G + Q VK L+ +
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS---HFDDQGKSFLFFKEMMN 292
N ++SM ++ +F + ++D ISWN++ A++ H ++ + F + +
Sbjct: 181 ENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHD 240
Query: 293 ECSIRPDDFTFASILASCTWHASFLH-GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI 351
E + T S L S H G+ IH + + V V N L+ MYA G
Sbjct: 241 EV-----NSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRS 295
Query: 352 GYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
A+ VF +M ++LISWN+++A+F N G A+ + M + G + VTFT L AC
Sbjct: 296 VEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAAC 355
Query: 412 NHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
KG + + + G+ N + L+ M G+ G +SE
Sbjct: 356 FTPDFFEKGRI-LHGLVVVSGLFYNQIIGNALVSMYGKIGEMSE 398
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 117/237 (49%), Gaps = 8/237 (3%)
Query: 262 KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS-FLHGK 320
++ +SWNT+++ + FF++M + I+P F AS++ +C S F G
Sbjct: 4 RNEVSWNTMMSGIVRVGLYLEGMEFFRKMC-DLGIKPSSFVIASLVTACGRSGSMFREGV 62
Query: 321 QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHG 380
Q+H F+ ++ DV V A++++Y G + + KVF +M RN++SW +++ + + G
Sbjct: 63 QVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKG 122
Query: 381 LGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDL--YFNSMEAAYGIAPNIG 438
E I+I++ M+ EGV + + + ++ +C G+++ L G+ +
Sbjct: 123 EPEEVIDIYKGMRGEGVGCNENSMSLVISSC---GLLKDESLGRQIIGQVVKSGLESKLA 179
Query: 439 HFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
+ LI MLG G + + YI D + S+ +A +G++ R+ L+
Sbjct: 180 VENSLISMLGSMGNV-DYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLM 235
>AT1G74600.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:28025153-28027840 REVERSE LENGTH=895
Length = 895
Score = 302 bits (773), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 171/527 (32%), Positives = 290/527 (55%), Gaps = 12/527 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVF---DGMSERNTVSWSAMISGYDQ 77
+HA V K G V+ L++MY K G + L+ +VF D + +N V+ MI+ + Q
Sbjct: 373 VHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIVN--VMITSFSQ 430
Query: 78 CGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
+ A+ LF++M + +EF S LS L L G+Q+HG +L+SG V
Sbjct: 431 SKKPGKAIRLFTRMLQEGLRTDEFSVCSLLSV---LDCLNLGKQVHGYTLKSGLVLDLTV 487
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
+SL T+Y KCG ++ ++ ++ + ++ISGF E + +F ML +G
Sbjct: 488 GSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNEYGYLREAIGLFSEMLDDGT 547
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
PD + +L ++ G +H ++ +D +G+ +++MY++ ++ +
Sbjct: 548 SPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDLGSALVNMYSKCGSLKLARQ 607
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
V+ + + D +S ++LI+ +S FL F++M+ D F +SIL +
Sbjct: 608 VYDRLPELDPVSCSSLISGYSQHGLIQDGFLLFRDMVMS-GFTMDSFAISSILKAAALSD 666
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
G Q+HA++ + + V ++L+ MY+K GSI K FS+++ +LI+W +IA
Sbjct: 667 ESSLGAQVHAYITKIGLCTEPSVGSSLLTMYSKFGSIDDCCKAFSQINGPDLIAWTALIA 726
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
++ HG A++++ MK +G KPD VTF G+L AC+H G+V + + NSM YGI
Sbjct: 727 SYAQHGKANEALQVYNLMKEKGFKPDKVTFVGVLSACSHGGLVEESYFHLNSMVKDYGIE 786
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
P H+ C++D LGR+GRL E E +IN H D +V G+LL+AC++HG + +G+ AK
Sbjct: 787 PENRHYVCMVDALGRSGRLREAESFINNMHIKPDALVWGTLLAACKIHGEVELGKVAAKK 846
Query: 495 LLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
+E+ P Y+ LSN+ A G W+EV RK++KG+G++KEPG++
Sbjct: 847 AIELEPSDAGAYISLSNILAEVGEWDEVEETRKLMKGTGVQKEPGWS 893
Score = 175 bits (443), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 116/466 (24%), Positives = 224/466 (48%), Gaps = 17/466 (3%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
+K+G + V + L++++ K R A KVF N W+ +I+G + +
Sbjct: 176 TIKMGYFFYEVVESALIDVFSKNLRFEDAYKVFRDSLSANVYCWNTIIAGALRNQNYGAV 235
Query: 85 LHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
LF +M V P+ + ++S L+ACASL L G+ + ++ G + FV +++ +
Sbjct: 236 FDLFHEMCVGFQKPDSYTYSSVLAACASLEKLRFGKVVQARVIKCGAEDV-FVCTAIVDL 294
Query: 142 YMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSF 201
Y KCG ++A+ V++ + VS+ ++SG+ ++++ E+FK M G + +
Sbjct: 295 YAKCGHMAEAMEVFSRIPNPSVVSWTVMLSGYTKSNDAFSALEIFKEMRHSGVEINNCTV 354
Query: 202 VGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ---FNFIEEVVRVFRL 258
++ +H K + ++SMY++ + E+V
Sbjct: 355 TSVISACGRPSMVCEASQVHAWVFKSGFYLDSSVAAALISMYSKSGDIDLSEQVFEDLDD 414
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
IQ ++++ N +I +FS GK+ F M+ E +R D+F+ S+L+
Sbjct: 415 IQRQNIV--NVMITSFSQSKKPGKAIRLFTRMLQE-GLRTDEFSVCSLLSVLD---CLNL 468
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
GKQ+H + ++ D+ V ++L +Y+KCGS+ ++K+F + +++ W +MI+ F
Sbjct: 469 GKQVHGYTLKSGLVLDLTVGSSLFTLYSKCGSLEESYKLFQGIPFKDNACWASMISGFNE 528
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC-NHSGMVRKGDLYFNSMEAAYGIAPNI 437
+G AI +F +M +G PD T +L C +H + R +++ ++ A ++
Sbjct: 529 YGYLREAIGLFSEMLDDGTSPDESTLAAVLTVCSSHPSLPRGKEIHGYTLRAGIDKGMDL 588
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
G S L++M + G L + ++ L DPV SL+S HG
Sbjct: 589 G--SALVNMYSKCGSLKLARQVYDRLPEL-DPVSCSSLISGYSQHG 631
Score = 164 bits (416), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 195/381 (51%), Gaps = 10/381 (2%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKV 93
VF++ LL+ Y G + A K+FD + + + VS + MISGY Q +L FS+M
Sbjct: 84 VFLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHF 143
Query: 94 L---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
L NE + S +SAC++L+A + + + +++ GY V ++LI ++ K + D
Sbjct: 144 LGFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFED 203
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
A V+ +S+ N +N +I+G + N F++F M PD +++ +L +
Sbjct: 204 AYKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQKPDSYTYSSVLAACAS 263
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
L+ R G + + +K + + I+ +YA+ + E + VF I + V+SW +
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
++ ++ +D + FKEM + + ++ T S++++C + Q+HA++F++
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHS-GVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSG 381
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS---YRNLISWNTMIAAFGNHGLGERAIE 387
Y D V AL++MY+K G I + +VF + +N++ N MI +F +AI
Sbjct: 382 FYLDSSVAAALISMYSKSGDIDLSEQVFEDLDDIQRQNIV--NVMITSFSQSKKPGKAIR 439
Query: 388 IFEQMKAEGVKPDSVTFTGLL 408
+F +M EG++ D + LL
Sbjct: 440 LFTRMLQEGLRTDEFSVCSLL 460
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 161/346 (46%), Gaps = 26/346 (7%)
Query: 133 FVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE 192
F++ SL++ Y G +DA ++ + VS N +ISG+ ++ E+ F M
Sbjct: 85 FLTKSLLSWYSNSGSMADAAKLFDTIPQPDVVSCNIMISGYKQHRLFEESLRFFSKMHFL 144
Query: 193 GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
GF + S+ ++ + L + C +K+ ++ + ++ ++++ E+
Sbjct: 145 GFEANEISYGSVISACSALQAPLFSELVCCHTIKMGYFFYEVVESALIDVFSKNLRFEDA 204
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
+VFR +V WNT+I + G F F EM +PD +T++S+LA+C
Sbjct: 205 YKVFRDSLSANVYCWNTIIAGALRNQNYGAVFDLFHEMCVGFQ-KPDSYTYSSVLAACAS 263
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTM 372
GK + A + + DV V A+V++YAKCG + A +VFS++ +++SW M
Sbjct: 264 LEKLRFGKVVQARVIKCGAE-DVFVCTAIVDLYAKCGHMAEAMEVFSRIPNPSVVSWTVM 322
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM----------VRKGDL 422
++ + A+EIF++M+ GV+ ++ T T ++ AC M V K
Sbjct: 323 LSGYTKSNDAFSALEIFKEMRHSGVEINNCTVTSVISACGRPSMVCEASQVHAWVFKSGF 382
Query: 423 YFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND 468
Y +S AA LI M ++G + E+ F L+D
Sbjct: 383 YLDSSVAA-----------ALISMYSKSGDIDLSEQV---FEDLDD 414
>AT3G25060.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9128516-9130321 FORWARD
LENGTH=601
Length = 601
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 172/548 (31%), Positives = 288/548 (52%), Gaps = 18/548 (3%)
Query: 13 CSKTMTFGLHAAVLKIGL-QSHVFV--SNQLLN-------MYVKCGRV---VLARKVFDG 59
C K + F + LK + Q H FV + LLN + CGR+ ARKVFD
Sbjct: 16 CPKRIKFLQSISKLKRHITQIHAFVISTGNLLNGSSISRDLIASCGRIGEISYARKVFDE 75
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ +R +++MI Y + L L+ QM K+ P+ F T+ AC S L +G
Sbjct: 76 LPQRGVSVYNSMIVVYSRGKNPDEVLRLYDQMIAEKIQPDSSTFTMTIKACLSGLVLEKG 135
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+ + ++ GY + FV +S++ +YMKCG+ +A ++ + + + +++GF +
Sbjct: 136 EAVWCKAVDFGYKNDVFVCSSVLNLYMKCGKMDEAEVLFGKMAKRDVICWTTMVTGFAQA 195
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
+ K E ++ M EGF DR +GLL S +L D + G S+H + L ++
Sbjct: 196 GKSLKAVEFYREMQNEGFGRDRVVMLGLLQASGDLGDTKMGRSVHGYLYRTGLPMNVVVE 255
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
++ MYA+ FIE RVF + K +SW +LI+ F+ K+F EM +
Sbjct: 256 TSLVDMYAKVGFIEVASRVFSRMMFKTAVSWGSLISGFAQNGLANKAFEAVVEMQS-LGF 314
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
+PD T +L +C+ S G+ +H ++ + R D AL++MY+KCG++ + +
Sbjct: 315 QPDLVTLVGVLVACSQVGSLKTGRLVHCYILK-RHVLDRVTATALMDMYSKCGALSSSRE 373
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
+F + ++L+ WNTMI+ +G HG G+ + +F +M ++PD TF LL A +HSG+
Sbjct: 374 IFEHVGRKDLVCWNTMISCYGIHGNGQEVVSLFLKMTESNIEPDHATFASLLSALSHSGL 433
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
V +G +F+ M Y I P+ H+ CLID+L RAGR+ E + IN N + +LL
Sbjct: 434 VEQGQHWFSVMINKYKIQPSEKHYVCLIDLLARAGRVEEALDMINSEKLDNALPIWVALL 493
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
S C H N+++G+ A +L++ P + L+SN +A+ W EV RK+++ + K
Sbjct: 494 SGCINHRNLSVGDIAANKILQLNPDSIGIQTLVSNFFATANKWKEVAKVRKLMRNGAMEK 553
Query: 537 EPGYAWLK 544
PGY+ ++
Sbjct: 554 VPGYSAIE 561
>AT4G35130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:16721084-16723498 REVERSE
LENGTH=804
Length = 804
Score = 300 bits (768), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 171/521 (32%), Positives = 289/521 (55%), Gaps = 10/521 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA V+K+G S V+V N L+++Y+K G A KVF+ M ER+ VSW++MISGY G+
Sbjct: 152 IHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGD 211
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS-FVSN 136
+ +L LF +M P+ F S L AC+ + + G++IH ++RS + V
Sbjct: 212 GFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMT 271
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVF-KLMLQEGFV 195
S++ MY K G+ S A ++ + N V++N +I + N F F K+ Q G
Sbjct: 272 SILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQ 331
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD + + LL S L+ G ++H A++ ++ ++ MY + ++ +
Sbjct: 332 PDVITSINLLPASAILE----GRTIHGYAMRRGFLPHMVLETALIDMYGECGQLKSAEVI 387
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + +K+VISWN++I A+ + F+E+ + S+ PD T ASIL + S
Sbjct: 388 FDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDS-SLVPDSTTIASILPAYAESLS 446
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G++IHA++ ++R + + + N+LV+MYA CG + A K F+ + ++++SWN++I A
Sbjct: 447 LSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMA 506
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ HG G ++ +F +M A V P+ TF LL AC+ SGMV +G YF SM+ YGI P
Sbjct: 507 YAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMVDEGWEYFESMKREYGIDP 566
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
I H+ C++D++GR G S + ++ + + + GSLL+A R H ++ I E A+ +
Sbjct: 567 GIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQI 626
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
++ T YVLL N+YA G W +V + +++ G+ +
Sbjct: 627 FKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISR 667
Score = 206 bits (523), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 123/436 (28%), Positives = 235/436 (53%), Gaps = 12/436 (2%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACAS 109
A ++FD M++ + W+ MI G+ CG + A+ +S+M V + F + + + A
Sbjct: 83 ALQLFDEMNKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAG 142
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
+ +L +G++IH + ++ G+ S +V NSLI++YMK G DA V+ + VS+N++
Sbjct: 143 ISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSM 202
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
ISG++ + +FK ML+ GF PDRFS + LG +++ + G +HC AV+ +
Sbjct: 203 ISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRI 262
Query: 230 DCTP-LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
+ ++ I+ MY+++ + R+F + +++++WN +I ++ +FL F+
Sbjct: 263 ETGDVMVMTSILDMYSKYGEVSYAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQ 322
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
+M + ++PD T ++L + ++ L G+ IH + R + + AL++MY +C
Sbjct: 323 KMSEQNGLQPDVITSINLLPA----SAILEGRTIHGYAMRRGFLPHMVLETALIDMYGEC 378
Query: 349 GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
G + A +F +M+ +N+ISWN++IAA+ +G A+E+F+++ + PDS T +L
Sbjct: 379 GQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLVPDSTTIASIL 438
Query: 409 IACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
A S + +G +++ +++ Y N + L+ M G L + + N L
Sbjct: 439 PAYAESLSLSEGREIHAYIVKSRYW--SNTIILNSLVHMYAMCGDLEDARKCFNHI-LLK 495
Query: 468 DPVVLGSLLSACRVHG 483
D V S++ A VHG
Sbjct: 496 DVVSWNSIIMAYAVHG 511
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 172/352 (48%), Gaps = 12/352 (3%)
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCS----DALSVYANSVGTNSVSYNALISGFVENH 177
L LR Y V++ +T ++ S DAL ++ ++ +N +I GF
Sbjct: 50 LVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKGFTSCG 109
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
+ + + M+ G D F++ ++ + G +H +KL + N
Sbjct: 110 LYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCN 169
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
++S+Y + + +VF + ++D++SWN++I+ + D S + FKEM+ +C +
Sbjct: 170 SLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEML-KCGFK 228
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTR-QYWDVGVHNALVNMYAKCGSIGYAHK 356
PD F+ S L +C+ S GK+IH R+R + DV V ++++MY+K G + YA +
Sbjct: 229 PDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVSYAER 288
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE-GVKPDSVTFTGLLIACNHSG 415
+F+ M RN+++WN MI + +G A F++M + G++PD +T LL A S
Sbjct: 289 IFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPA---SA 345
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
++ ++ +M G P++ + LIDM G G+L E ++ N
Sbjct: 346 ILEGRTIHGYAMRR--GFLPHMVLETALIDMYGECGQLKSAEVIFDRMAEKN 395
>AT3G22690.2 | Symbols: | INVOLVED IN: photosystem II assembly,
regulation of chlorophyll biosynthetic process,
photosystem I assembly, thylakoid membrane organization,
RNA modification; LOCATED IN: chloroplast; EXPRESSED IN:
13 plant structures; EXPRESSED DURING: LP.04 four leaves
visible, 4 anthesis, petal differentiation and expansion
stage, E expanded cotyledon stage, D bilateral stage;
CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein
match is: Tetratricopeptide repeat (TPR)-like
superfamily protein (TAIR:AT2G29760.1). |
chr3:8022006-8024534 REVERSE LENGTH=842
Length = 842
Score = 299 bits (766), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 289/574 (50%), Gaps = 39/574 (6%)
Query: 10 LQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT 65
L C+K+ G +H ++K+G +FV N L++ Y +CG + ARKVFD MSERN
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHG 121
VSW++MI GY + A+ LF +M +V PN +SACA L L G++++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
SG + ++L+ MYMKC A ++ +N NA+ S +V +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
VF LM+ G PDR S + + + L + G S H ++ + I N ++
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF---SHFDDQGKSF-------------- 284
MY + + + R+F + +K V++WN+++ + D ++F
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 285 --------LF------FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
LF F M ++ + D T SI ++C + K I+ ++ +
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
DV + LV+M+++CG A +F+ ++ R++ +W I A G ERAIE+F+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
M +G+KPD V F G L AC+H G+V++G F SM +G++P H+ C++D+LGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
G L E + I + V+ SLL+ACRV GN+ + A+ + + P T YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
N+YAS G WN++ R +K GLRK PG + ++
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 220/474 (46%), Gaps = 50/474 (10%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCG---RVVLARKVFDGMSERNTV-SWSAMISGYDQ 77
H ++ K GL + V +L+ + G + A++VF+ T ++++I GY
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 78 CGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
G A+ LF +M + P+++ F LSACA RA G QIHGL ++ GYA FV
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEV-FKLMLQEG 193
NSL+ Y +CG+ A V+ N VS+ ++I G+ + ++ F+++ E
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
P+ + V ++ L+D TG ++ ++ L+ + ++ MY + N I+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 254 RVFRLIQDKDVISWNTLINAF-SHFDDQG--KSFLFFKEMMNECSIRPDDFTFASILASC 310
R+F D+ S L NA S++ QG + L +M + +RPD + S ++SC
Sbjct: 292 RLF----DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 311 TWHASFLHGKQIHAFLFRTR-QYWDVGVHNALVNMYAKC--------------------- 348
+ + L GK H ++ R + WD + NAL++MY KC
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 349 ----------GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA-EGV 397
G + A + F M +N++SWNT+I+ L E AIE+F M++ EGV
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
D VT + AC H G + + +E GI ++ + L+DM R G
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCG 519
>AT3G22690.1 | Symbols: | CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1685 (InterPro:IPR012881),
Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: Tetratricopeptide
repeat (TPR)-like superfamily protein
(TAIR:AT2G29760.1); Has 49784 Blast hits to 14716
proteins in 280 species: Archae - 2; Bacteria - 10;
Metazoa - 107; Fungi - 167; Plants - 48594; Viruses - 0;
Other Eukaryotes - 904 (source: NCBI BLink). |
chr3:8021347-8024534 REVERSE LENGTH=938
Length = 938
Score = 299 bits (765), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 180/574 (31%), Positives = 289/574 (50%), Gaps = 39/574 (6%)
Query: 10 LQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT 65
L C+K+ G +H ++K+G +FV N L++ Y +CG + ARKVFD MSERN
Sbjct: 141 LSACAKSRAKGNGIQIHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNV 200
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHG 121
VSW++MI GY + A+ LF +M +V PN +SACA L L G++++
Sbjct: 201 VSWTSMICGYARRDFAKDAVDLFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYA 260
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
SG + ++L+ MYMKC A ++ +N NA+ S +V +
Sbjct: 261 FIRNSGIEVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDLCNAMASNYVRQGLTRE 320
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
VF LM+ G PDR S + + + L + G S H ++ + I N ++
Sbjct: 321 ALGVFNLMMDSGVRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALID 380
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF---SHFDDQGKSF-------------- 284
MY + + + R+F + +K V++WN+++ + D ++F
Sbjct: 381 MYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTI 440
Query: 285 --------LF------FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
LF F M ++ + D T SI ++C + K I+ ++ +
Sbjct: 441 ISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNG 500
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
DV + LV+M+++CG A +F+ ++ R++ +W I A G ERAIE+F+
Sbjct: 501 IQLDVRLGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFD 560
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
M +G+KPD V F G L AC+H G+V++G F SM +G++P H+ C++D+LGRA
Sbjct: 561 DMIEQGLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRA 620
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
G L E + I + V+ SLL+ACRV GN+ + A+ + + P T YVLLS
Sbjct: 621 GLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLS 680
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
N+YAS G WN++ R +K GLRK PG + ++
Sbjct: 681 NVYASAGRWNDMAKVRLSMKEKGLRKPPGTSSIQ 714
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 132/474 (27%), Positives = 220/474 (46%), Gaps = 50/474 (10%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCG---RVVLARKVFDGMSERNTV-SWSAMISGYDQ 77
H ++ K GL + V +L+ + G + A++VF+ T ++++I GY
Sbjct: 52 HRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRGYAS 111
Query: 78 CGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
G A+ LF +M + P+++ F LSACA RA G QIHGL ++ GYA FV
Sbjct: 112 SGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKDLFV 171
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEV-FKLMLQEG 193
NSL+ Y +CG+ A V+ N VS+ ++I G+ + ++ F+++ E
Sbjct: 172 QNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRMVRDEE 231
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
P+ + V ++ L+D TG ++ ++ L+ + ++ MY + N I+
Sbjct: 232 VTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNAIDVAK 291
Query: 254 RVFRLIQDKDVISWNTLINAF-SHFDDQG--KSFLFFKEMMNECSIRPDDFTFASILASC 310
R+F D+ S L NA S++ QG + L +M + +RPD + S ++SC
Sbjct: 292 RLF----DEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISSC 347
Query: 311 TWHASFLHGKQIHAFLFRTR-QYWDVGVHNALVNMYAKC--------------------- 348
+ + L GK H ++ R + WD + NAL++MY KC
Sbjct: 348 SQLRNILWGKSCHGYVLRNGFESWD-NICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTW 406
Query: 349 ----------GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA-EGV 397
G + A + F M +N++SWNT+I+ L E AIE+F M++ EGV
Sbjct: 407 NSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGV 466
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
D VT + AC H G + + +E GI ++ + L+DM R G
Sbjct: 467 NADGVTMMSIASACGHLGALDLAKWIYYYIEKN-GIQLDVRLGTTLVDMFSRCG 519
>AT5G65570.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26203968-26206184 FORWARD
LENGTH=738
Length = 738
Score = 298 bits (762), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 176/548 (32%), Positives = 300/548 (54%), Gaps = 20/548 (3%)
Query: 9 LLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
LL++C + + A +LK G + + S +L++ +KCG + AR+VFDGMSER+
Sbjct: 71 LLRQCIDERSISGIKTIQAHMLKSGFPAEISGS-KLVDASLKCGDIDYARQVFDGMSERH 129
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHG 121
V+W+++I+ + A+ ++ M VLP+E+ +S A + L + Q+ HG
Sbjct: 130 IVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHG 189
Query: 122 LSLRSGY-ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
L++ G S FV ++L+ MY+K G+ +A V + V ALI G+ + E
Sbjct: 190 LAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVLITALIVGYSQKGEDT 249
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ + F+ ML E P+ +++ +L NL D G +H VK + ++
Sbjct: 250 EAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQTSLL 309
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
+MY + + +++ +RVF+ I+ + +SW +LI+ + + + F++MM + SI+P+
Sbjct: 310 TMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRD-SIKPNS 368
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
FT +S L C+ A F G+QIH + + D + L+++Y KCG A VF
Sbjct: 369 FTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDT 428
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+S ++IS NTMI ++ +G G A+++FE+M G++P+ VT +L+ACN+S +V +G
Sbjct: 429 LSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEG 488
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE----EYINKFHHLNDPVVLGSLL 476
F+S + N H++C++D+LGRAGRL E E E IN D V+ +LL
Sbjct: 489 CELFDSFRKDKIMLTN-DHYACMVDLLGRAGRLEEAEMLTTEVINP-----DLVLWRTLL 542
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
SAC+VH + + ER+ + +LE+ P +L+SNLYAS G WN V + +K L+K
Sbjct: 543 SACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKK 602
Query: 537 EPGYAWLK 544
P +W++
Sbjct: 603 NPAMSWVE 610
>AT3G22150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:7813028-7815490 FORWARD
LENGTH=820
Length = 820
Score = 296 bits (759), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 174/537 (32%), Positives = 297/537 (55%), Gaps = 17/537 (3%)
Query: 21 LHAAVLKIGLQ--SHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
+ +LK+G + +FV + ++MY + G + +R+VFD ERN W+ MI Y Q
Sbjct: 236 FYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVYVQN 295
Query: 79 GEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
++ LF + +++ +E + SA ++L+ + G+Q HG ++ +
Sbjct: 296 DCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELPIVI 355
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
NSL+ MY +CG + V+ + + VS+N +IS FV+N ++G + M ++GF
Sbjct: 356 VNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQKQGF 415
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
D + LL ++NL + G H ++ + + + ++ MY++ I +
Sbjct: 416 KIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFEGM-NSYLIDMYSKSGLIRISQK 474
Query: 255 VFRL--IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
+F ++D +WN++I+ ++ K+FL F++M+ E +IRP+ T ASIL +C+
Sbjct: 475 LFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKML-EQNIRPNAVTVASILPACSQ 533
Query: 313 HASFLHGKQIHAFLFRTRQYWD--VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
S GKQ+H F RQY D V V +ALV+MY+K G+I YA +FS+ RN +++
Sbjct: 534 IGSVDLGKQLHGF--SIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQTKERNSVTYT 591
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAA 430
TMI +G HG+GERAI +F M+ G+KPD++TF +L AC++SG++ +G F M
Sbjct: 592 TMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGLKIFEEMREV 651
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL-GSLLSACRVHGNMAIGE 489
Y I P+ H+ C+ DMLGR GR++E E++ + L GSLL +C++HG + + E
Sbjct: 652 YNIQPSSEHYCCITDMLGRVGRVNEAYEFVKGLGEEGNIAELWGSLLGSCKLHGELELAE 711
Query: 490 RLAKLLLEVPPVTT-SPY-VLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+++ L + S Y VLLSN+YA + W V R+ ++ GL+KE G + ++
Sbjct: 712 TVSERLAKFDKGKNFSGYEVLLSNMYAEEQKWKSVDKVRRGMREKGLKKEVGRSGIE 768
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 139/521 (26%), Positives = 247/521 (47%), Gaps = 29/521 (5%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVV------LAR 54
T + L+ C++T +H +++ S V N L+NMYV C + R
Sbjct: 109 TYSSTLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVR 168
Query: 55 KVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS---QMKVLPNEFVFASTLSACASLR 111
KVFD M +N V+W+ +IS Y + G + A F +M+V P+ F + A + R
Sbjct: 169 KVFDNMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISR 228
Query: 112 ALVQGQQIHGLSLRSG--YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
++ + +GL L+ G Y FV +S I+MY + G + V+ + V N +N +
Sbjct: 229 SIKKANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTM 288
Query: 170 ISGFVENHEPEKGFEVF-KLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA 228
I +V+N + E+F + + + V D +++ + L G H K
Sbjct: 289 IGVYVQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNF 348
Query: 229 LDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--FDDQGKSFLF 286
+ +I N +M MY++ + + VF ++++DV+SWNT+I+AF DD+G ++
Sbjct: 349 RELPIVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVY 408
Query: 287 FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYA 346
M + + D T ++L++ + + GKQ HAFL R ++ G+++ L++MY+
Sbjct: 409 ---EMQKQGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQGIQFE-GMNSYLIDMYS 464
Query: 347 KCGSIGYAHKVFSKMSY--RNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
K G I + K+F Y R+ +WN+MI+ + +G E+ +F +M + ++P++VT
Sbjct: 465 KSGLIRISQKLFEGSGYAERDQATWNSMISGYTQNGHTEKTFLVFRKMLEQNIRPNAVTV 524
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH 464
+L AC+ G V G Y + N+ S L+DM +AG + E+ ++
Sbjct: 525 ASILPACSQIGSVDLGKQLHGFSIRQY-LDQNVFVASALVDMYSKAGAIKYAEDMFSQTK 583
Query: 465 HLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSP 505
N +L +G +GER L L + P
Sbjct: 584 ERNSVTYTTMILG----YGQHGMGERAISLFLSMQESGIKP 620
Score = 157 bits (396), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 205/434 (47%), Gaps = 39/434 (8%)
Query: 48 GRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK-VLP----NEFVFAS 102
G LAR++FD + + TV W+ +I G+ AL +S+MK P + + ++S
Sbjct: 53 GNPQLARQLFDAIPKPTTVLWNTIIIGFICNNLPHEALLFYSRMKKTAPFTNCDAYTYSS 112
Query: 103 TLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS------VYA 156
TL ACA + L G+ +H +R S V NSL+ MY+ C D V+
Sbjct: 113 TLKACAETKNLKAGKAVHCHLIRCLQNSSRVVHNSLMNMYVSCLNAPDCFEYDVVRKVFD 172
Query: 157 NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRT 216
N N V++N LIS +V+ + F +M++ P SFV + + +
Sbjct: 173 NMRRKNVVAWNTLISWYVKTGRNAEACRQFGIMMRMEVKPSPVSFVNVFPAVSISRSIKK 232
Query: 217 GMSLHCQAVKLALDCTP--LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
+ +KL + + + +SMYA+ IE RVF ++++ WNT+I +
Sbjct: 233 ANVFYGLMLKLGDEYVKDLFVVSSAISMYAELGDIESSRRVFDSCVERNIEVWNTMIGVY 292
Query: 275 SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD 334
D +S F E + I D+ T+ ++ + G+Q H F+ + +
Sbjct: 293 VQNDCLVESIELFLEAIGSKEIVSDEVTYLLAASAVSALQQVELGRQFHGFVSKNFRELP 352
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA 394
+ + N+L+ MY++CGS+ + VF M R+++SWNTMI+AF +GL + + + +M+
Sbjct: 353 IVIVNSLMVMYSRCGSVHKSFGVFLSMRERDVVSWNTMISAFVQNGLDDEGLMLVYEMQK 412
Query: 395 EGVKPDSVTFTGLLIACN-----------HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL 443
+G K D +T T LL A + H+ ++R+G + F M S L
Sbjct: 413 QGFKIDYITVTALLSAASNLRNKEIGKQTHAFLIRQG-IQFEGMN------------SYL 459
Query: 444 IDMLGRAG--RLSE 455
IDM ++G R+S+
Sbjct: 460 IDMYSKSGLIRISQ 473
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 7/122 (5%)
Query: 5 TIGTLLQRCSK--TMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ ++L CS+ ++ G LH ++ L +VFV++ L++MY K G + A +F
Sbjct: 523 TVASILPACSQIGSVDLGKQLHGFSIRQYLDQNVFVASALVDMYSKAGAIKYAEDMFSQT 582
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQ 117
ERN+V+++ MI GY Q G A+ LF M+ + P+ F + LSAC+ + +G
Sbjct: 583 KERNSVTYTTMILGYGQHGMGERAISLFLSMQESGIKPDAITFVAVLSACSYSGLIDEGL 642
Query: 118 QI 119
+I
Sbjct: 643 KI 644
>AT4G19191.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10496228-10498192 FORWARD
LENGTH=654
Length = 654
Score = 295 bits (756), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 168/528 (31%), Positives = 279/528 (52%), Gaps = 13/528 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA ++K S VFV ++M+VKC V A KVF+ M ER+ +W+AM+SG+ Q G
Sbjct: 74 VHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGH 133
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
A LF +M+ + P+ + + + + ++L + +H + +R G V+N+
Sbjct: 134 TDKAFSLFREMRLNEITPDSVTVMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANT 193
Query: 138 LITMYMKCGQCSDALSVY-ANSVGTNSV-SYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
I+ Y KCG A V+ A G +V S+N++ + E F ++ LML+E F
Sbjct: 194 WISTYGKCGDLDSAKLVFEAIDRGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLREEFK 253
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD +F+ L N + G +H A+ L D N +SMY++ +
Sbjct: 254 PDLSTFINLAASCQNPETLTQGRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLL 313
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F ++ + +SW +I+ ++ D ++ F M+ +PD T S+++ C S
Sbjct: 314 FDIMTSRTCVSWTVMISGYAEKGDMDEALALFHAMIKSGE-KPDLVTLLSLISGCGKFGS 372
Query: 316 FLHGKQIHAFLFRTRQYW----DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNT 371
GK I A R Y +V + NAL++MY+KCGSI A +F + +++W T
Sbjct: 373 LETGKWIDA---RADIYGCKRDNVMICNALIDMYSKCGSIHEARDIFDNTPEKTVVTWTT 429
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
MIA + +G+ A+++F +M KP+ +TF +L AC HSG + KG YF+ M+ Y
Sbjct: 430 MIAGYALNGIFLEALKLFSKMIDLDYKPNHITFLAVLQACAHSGSLEKGWEYFHIMKQVY 489
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERL 491
I+P + H+SC++D+LGR G+L E E I D + G+LL+AC++H N+ I E+
Sbjct: 490 NISPGLDHYSCMVDLLGRKGKLEEALELIRNMSAKPDAGIWGALLNACKIHRNVKIAEQA 549
Query: 492 AKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
A+ L + P +PYV ++N+YA+ GMW+ R ++K ++K PG
Sbjct: 550 AESLFNLEPQMAAPYVEMANIYAAAGMWDGFARIRSIMKQRNIKKYPG 597
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 8/384 (2%)
Query: 84 ALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
+L LF +MK PN F F ACA L + + +H ++S + S FV + +
Sbjct: 36 SLLLFREMKRGGFEPNNFTFPFVAKACARLADVGCCEMVHAHLIKSPFWSDVFVGTATVD 95
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
M++KC A V+ ++ ++NA++SGF ++ +K F +F+ M PD +
Sbjct: 96 MFVKCNSVDYAAKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVT 155
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
+ L+ ++ + ++H ++L +D + N +S Y + ++ VF I
Sbjct: 156 VMTLIQSASFEKSLKLLEAMHAVGIRLGVDVQVTVANTWISTYGKCGDLDSAKLVFEAID 215
Query: 261 --DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
D+ V+SWN++ A+S F + +F + M+ E +PD TF ++ ASC +
Sbjct: 216 RGDRTVVSWNSMFKAYSVFGEAFDAFGLYCLMLRE-EFKPDLSTFINLAASCQNPETLTQ 274
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
G+ IH+ D+ N ++MY+K A +F M+ R +SW MI+ +
Sbjct: 275 GRLIHSHAIHLGTDQDIEAINTFISMYSKSEDTCSARLLFDIMTSRTCVSWTVMISGYAE 334
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA-PNI 437
G + A+ +F M G KPD VT L+ C G + G + ++ YG N+
Sbjct: 335 KGDMDEALALFHAMIKSGEKPDLVTLLSLISGCGKFGSLETGK-WIDARADIYGCKRDNV 393
Query: 438 GHFSCLIDMLGRAGRLSEVEEYIN 461
+ LIDM + G + E + +
Sbjct: 394 MICNALIDMYSKCGSIHEARDIFD 417
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 83/155 (53%), Gaps = 1/155 (0%)
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
R++R+ V +WN I + +D +S L F+EM P++FTF + +C
Sbjct: 7 RLYRISGLSSVNAWNLQIREAVNRNDPVESLLLFREM-KRGGFEPNNFTFPFVAKACARL 65
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
A + +HA L ++ + DV V A V+M+ KC S+ YA KVF +M R+ +WN M+
Sbjct: 66 ADVGCCEMVHAHLIKSPFWSDVFVGTATVDMFVKCNSVDYAAKVFERMPERDATTWNAML 125
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
+ F G ++A +F +M+ + PDSVT L+
Sbjct: 126 SGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLI 160
>AT5G39350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:15750929-15752962 FORWARD
LENGTH=677
Length = 677
Score = 294 bits (753), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 172/539 (31%), Positives = 273/539 (50%), Gaps = 10/539 (1%)
Query: 15 KTMTFGL--HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMI 72
K+M GL H +L+ +V N LL MY+ G+V +AR VFD M R+ +SW+ MI
Sbjct: 131 KSMKLGLVVHGRILRSWFGRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMI 190
Query: 73 SGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA 129
SGY + G AL +F M V + S L C L+ L G+ +H L
Sbjct: 191 SGYYRNGYMNDALMMFDWMVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLG 250
Query: 130 SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
V N+L+ MY+KCG+ +A V+ + +++ +I+G+ E+ + E E+ +LM
Sbjct: 251 DKIEVKNALVNMYLKCGRMDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLM 310
Query: 190 LQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
EG P+ + L+ + G LH AV+ + +I ++SMYA+ +
Sbjct: 311 QFEGVRPNAVTIASLVSVCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRV 370
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
+ RVF W+ +I + + FK M E + P+ T S+L +
Sbjct: 371 DLCFRVFSGASKYHTGPWSAIIAGCVQNELVSDALGLFKRMRRE-DVEPNIATLNSLLPA 429
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS----KMSYRN 365
A IH +L +T + LV++Y+KCG++ AHK+F+ K ++
Sbjct: 430 YAALADLRQAMNIHCYLTKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKD 489
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
++ W +I+ +G HG G A+++F +M GV P+ +TFT L AC+HSG+V +G F
Sbjct: 490 VVLWGALISGYGMHGDGHNALQVFMEMVRSGVTPNEITFTSALNACSHSGLVEEGLTLFR 549
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNM 485
M Y H++C++D+LGRAGRL E I V G+LL+AC H N+
Sbjct: 550 FMLEHYKTLARSNHYTCIVDLLGRAGRLDEAYNLITTIPFEPTSTVWGALLAACVTHENV 609
Query: 486 AIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+GE A L E+ P T YVLL+N+YA+ G W ++ R M++ GLRK+PG++ ++
Sbjct: 610 QLGEMAANKLFELEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIE 668
Score = 176 bits (445), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 128/500 (25%), Positives = 235/500 (47%), Gaps = 14/500 (2%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
S + T LH V+ G S +S L Y CG + ARK+F+ M + + +S++ +I
Sbjct: 30 SISKTKALHCHVITGGRVSGHILST-LSVTYALCGHITYARKLFEEMPQSSLLSYNIVIR 88
Query: 74 GYDQCGEHWMALHLFSQM-----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
Y + G + A+ +F +M K +P+ + + A L+++ G +HG LRS +
Sbjct: 89 MYVREGLYHDAISVFIRMVSEGVKCVPDGYTYPFVAKAAGELKSMKLGLVVHGRILRSWF 148
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
+V N+L+ MYM G+ A V+ + +S+N +ISG+ N +F
Sbjct: 149 GRDKYVQNALLAMYMNFGKVEMARDVFDVMKNRDVISWNTMISGYYRNGYMNDALMMFDW 208
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
M+ E D + V +L +L D G ++H + L + N +++MY +
Sbjct: 209 MVNESVDLDHATIVSMLPVCGHLKDLEMGRNVHKLVEEKRLGDKIEVKNALVNMYLKCGR 268
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
++E VF ++ +DVI+W +IN ++ D + + M E +RP+ T AS+++
Sbjct: 269 MDEARFVFDRMERRDVITWTCMINGYTEDGDVENALELCRLMQFE-GVRPNAVTIASLVS 327
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
C GK +H + R + Y D+ + +L++MYAKC + +VFS S +
Sbjct: 328 VCGDALKVNDGKCLHGWAVRQQVYSDIIIETSLISMYAKCKRVDLCFRVFSGASKYHTGP 387
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
W+ +IA + L A+ +F++M+ E V+P+ T LL A +R+ + +
Sbjct: 388 WSAIIAGCVQNELVSDALGLFKRMRREDVEPNIATLNSLLPAYAALADLRQA-MNIHCYL 446
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF---HHLNDPVVLGSLLSACRVHGNM 485
G ++ + L+ + + G L + N H D V+ G+L+S +HG+
Sbjct: 447 TKTGFMSSLDAATGLVHVYSKCGTLESAHKIFNGIQEKHKSKDVVLWGALISGYGMHGD- 505
Query: 486 AIGERLAKLLLEVPPVTTSP 505
G ++ +E+ +P
Sbjct: 506 --GHNALQVFMEMVRSGVTP 523
>AT3G01580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:223529-225511 REVERSE
LENGTH=660
Length = 660
Score = 294 bits (752), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 165/542 (30%), Positives = 288/542 (53%), Gaps = 10/542 (1%)
Query: 5 TIGTLLQRCS--KTMTFG--LHAAVLK-IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
T+ L+ C + + +G +H V K + L S ++V + L+ MY+KCGR++ A ++FD
Sbjct: 62 TLPVALKACGELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDE 121
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQ 115
+ + + V+WS+M+SG+++ G + A+ F +M V P+ + +SAC L
Sbjct: 122 LEKPDIVTWSSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRL 181
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G+ +HG +R G+++ + NSL+ Y K +A++++ + +S++ +I+ +V+
Sbjct: 182 GRCVHGFVIRRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQ 241
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
N + VF M+ +G P+ + + +L D G H A++ L+ +
Sbjct: 242 NGAAAEALLVFNDMMDDGTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKV 301
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
++ MY + EE VF I KDV+SW LI+ F+ +S F M+ E +
Sbjct: 302 STALVDMYMKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENN 361
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
RPD +L SC+ K H+++ + + + +LV +Y++CGS+G A
Sbjct: 362 TRPDAILMVKVLGSCSELGFLEQAKCFHSYVIKYGFDSNPFIGASLVELYSRCGSLGNAS 421
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM-KAEGVKPDSVTFTGLLIACNHS 414
KVF+ ++ ++ + W ++I +G HG G +A+E F M K+ VKP+ VTF +L AC+H+
Sbjct: 422 KVFNGIALKDTVVWTSLITGYGIHGKGTKALETFNHMVKSSEVKPNEVTFLSILSACSHA 481
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGS 474
G++ +G F M Y +APN+ H++ L+D+LGR G L E + P +LG+
Sbjct: 482 GLIHEGLRIFKLMVNDYRLAPNLEHYAVLVDLLGRVGDLDTAIEITKRMPFSPTPQILGT 541
Query: 475 LLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGL 534
LL ACR+H N + E +AK L E+ Y+L+SN+Y G W V R +K G+
Sbjct: 542 LLGACRIHQNGEMAETVAKKLFELESNHAGYYMLMSNVYGVKGEWENVEKLRNSVKQRGI 601
Query: 535 RK 536
+K
Sbjct: 602 KK 603
Score = 201 bits (511), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 127/440 (28%), Positives = 222/440 (50%), Gaps = 9/440 (2%)
Query: 51 VLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSAC 107
V AR++F M++R+ W+ ++ + + L+ FS M + P+ F L AC
Sbjct: 11 VDARQMFGEMTKRSLYQWNTLLKSLSREKQWEEVLYHFSHMFRDEEKPDNFTLPVALKAC 70
Query: 108 ASLRALVQGQQIHGLSLRS-GYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY 166
LR + G+ IHG + S +V +SLI MY+KCG+ +AL ++ + V++
Sbjct: 71 GELREVNYGEMIHGFVKKDVTLGSDLYVGSSLIYMYIKCGRMIEALRMFDELEKPDIVTW 130
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
++++SGF +N P + E F+ M+ V PDR + + L+ T L + R G +H +
Sbjct: 131 SSMVSGFEKNGSPYQAVEFFRRMVMASDVTPDRVTLITLVSACTKLSNSRLGRCVHGFVI 190
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFL 285
+ + N +++ YA+ +E V +F++I +KDVISW+T+I + ++ L
Sbjct: 191 RRGFSNDLSLVNSLLNCYAKSRAFKEAVNLFKMIAEKDVISWSTVIACYVQNGAAAEALL 250
Query: 286 FFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMY 345
F +MM++ P+ T +L +C G++ H R +V V ALV+MY
Sbjct: 251 VFNDMMDD-GTEPNVATVLCVLQACAAAHDLEQGRKTHELAIRKGLETEVKVSTALVDMY 309
Query: 346 AKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE-GVKPDSVTF 404
KC S A+ VFS++ ++++SW +I+ F +G+ R+IE F M E +PD++
Sbjct: 310 MKCFSPEEAYAVFSRIPRKDVVSWVALISGFTLNGMAHRSIEEFSIMLLENNTRPDAILM 369
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH 464
+L +C+ G + + F+S YG N + L+++ R G L + N
Sbjct: 370 VKVLGSCSELGFLEQAKC-FHSYVIKYGFDSNPFIGASLVELYSRCGSLGNASKVFNGI- 427
Query: 465 HLNDPVVLGSLLSACRVHGN 484
L D VV SL++ +HG
Sbjct: 428 ALKDTVVWTSLITGYGIHGK 447
>AT4G30700.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:14962617-14964995 REVERSE
LENGTH=792
Length = 792
Score = 291 bits (745), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 166/531 (31%), Positives = 278/531 (52%), Gaps = 14/531 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H + G S + + + ++ MY K RV ARKVFD M E++T+ W+ MISGY +
Sbjct: 141 IHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEM 200
Query: 81 HWMALHLFSQMKVLPNE-------FVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
+ ++ +F + L NE L A A L+ L G QIH L+ ++G S +
Sbjct: 201 YVESIQVF---RDLINESCTRLDTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDY 257
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
V I++Y KCG+ +++ + V+YNA+I G+ N E E +FK ++ G
Sbjct: 258 VLTGFISLYSKCGKIKMGSALFREFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSG 317
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
+ V L+ S +L ++H +K + + ++Y++ N IE
Sbjct: 318 ARLRSSTLVSLVPVSGHL---MLIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESAR 374
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
++F +K + SWN +I+ ++ + F+EM + P+ T IL++C
Sbjct: 375 KLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREM-QKSEFSPNPVTITCILSACAQL 433
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
+ GK +H + T + V AL+ MYAKCGSI A ++F M+ +N ++WNTMI
Sbjct: 434 GALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMI 493
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGI 433
+ +G HG G+ A+ IF +M G+ P VTF +L AC+H+G+V++GD FNSM YG
Sbjct: 494 SGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGF 553
Query: 434 APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAK 493
P++ H++C++D+LGRAG L ++I V +LL ACR+H + + +++
Sbjct: 554 EPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSE 613
Query: 494 LLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
L E+ P +VLLSN++++D + + + R+ K L K PGY ++
Sbjct: 614 KLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIE 664
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 116/500 (23%), Positives = 228/500 (45%), Gaps = 16/500 (3%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
HA ++ G ++ + + +L G + AR +F + + ++ ++ G+
Sbjct: 40 HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVFLFNVLMRGFSVNESP 99
Query: 82 WMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+L +F+ ++ + PN +A +SA + R G+ IHG ++ G S + ++
Sbjct: 100 HSSLSVFAHLRKSTDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSN 159
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP- 196
++ MY K + DA V+ +++ +N +ISG+ +N + +VF+ ++ E
Sbjct: 160 IVKMYFKFWRVEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRL 219
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D + + +L L + R GM +H A K + +S+Y++ I+ +F
Sbjct: 220 DTTTLLDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALF 279
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
R + D++++N +I+ ++ + S FKE+M + R T S L + H
Sbjct: 280 REFRKPDIVAYNAMIHGYTSNGETELSLSLFKELMLSGA-RLRSSTLVS-LVPVSGHLML 337
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
++ IH + ++ V AL +Y+K I A K+F + ++L SWN MI+ +
Sbjct: 338 IYA--IHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGY 395
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
+GL E AI +F +M+ P+ VT T +L AC G + G + + + + +
Sbjct: 396 TQNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGK-WVHDLVRSTDFESS 454
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
I + LI M + G ++E + N+ V +++S +HG G+ +
Sbjct: 455 IYVSTALIGMYAKCGSIAEARRLFDLMTKKNE-VTWNTMISGYGLHGQ---GQEALNIFY 510
Query: 497 EV--PPVTTSPYVLLSNLYA 514
E+ +T +P L LYA
Sbjct: 511 EMLNSGITPTPVTFLCVLYA 530
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/192 (34%), Positives = 101/192 (52%), Gaps = 3/192 (1%)
Query: 17 MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYD 76
+ + +H LK SH VS L +Y K + ARK+FD E++ SW+AMISGY
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 77 QCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
Q G A+ LF +M+ PN LSACA L AL G+ +H L + + S +
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
VS +LI MY KCG ++A ++ N V++N +ISG+ + + ++ +F ML G
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 194 FVPDRFSFVGLL 205
P +F+ +L
Sbjct: 517 ITPTPVTFLCVL 528
>AT4G04370.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:2134060-2136249 REVERSE
LENGTH=729
Length = 729
Score = 291 bits (744), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 161/529 (30%), Positives = 289/529 (54%), Gaps = 7/529 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH + G + V N +LN+Y KC V A+ +FD M +R+ VSW+ MISGY G
Sbjct: 166 LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGN 225
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
L L +M+ + P++ F ++LS ++ L G+ +H +++G+ + +
Sbjct: 226 MSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKTA 285
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
LITMY+KCG+ + V + V + +ISG + EK VF MLQ G
Sbjct: 286 LITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDLS 345
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVK--LALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
+ ++ L F G S+H ++ LD TP + N +++MYA+ +++ + +
Sbjct: 346 SEAIASVVASCAQLGSFDLGASVHGYVLRHGYTLD-TPAL-NSLITMYAKCGHLDKSLVI 403
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + ++D++SWN +I+ ++ D K+ L F+EM + + D FT S+L +C+ +
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
GK IH + R+ V ALV+MY+KCG + A + F +S+++++SW +IA
Sbjct: 464 LPVGKLIHCIVIRSFIRPCSLVDTALVDMYSKCGYLEAAQRCFDSISWKDVVSWGILIAG 523
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+G HG G+ A+EI+ + G++P+ V F +L +C+H+GMV++G F+SM +G+ P
Sbjct: 524 YGFHGKGDIALEIYSEFLHSGMEPNHVIFLAVLSSCSHNGMVQQGLKIFSSMVRDFGVEP 583
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
N H +C++D+L RA R+ + ++ + VLG +L ACR +G + + + + +
Sbjct: 584 NHEHLACVVDLLCRAKRIEDAFKFYKENFTRPSIDVLGIILDACRANGKTEVEDIICEDM 643
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+E+ P YV L + +A+ W++V+ + ++ GL+K PG++ ++
Sbjct: 644 IELKPGDAGHYVKLGHSFAAMKRWDDVSESWNQMRSLGLKKLPGWSKIE 692
Score = 213 bits (542), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 146/492 (29%), Positives = 238/492 (48%), Gaps = 14/492 (2%)
Query: 5 TIGTLLQRCS--KTMTFGL--HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +LL+ C+ + ++FGL H VL G S ++S+ L+N+Y K G + ARKVF+ M
Sbjct: 48 TFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEM 107
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQ 117
ER+ V W+AMI Y + G A L ++M+ + P LS + + Q Q
Sbjct: 108 RERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIKPGPVTLLEMLSG---VLEITQLQ 164
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
+H ++ G+ V NS++ +Y KC DA ++ + VS+N +ISG+
Sbjct: 165 CLHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVG 224
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
+ ++ M +G PD+ +F L S + D G LHCQ VK D +
Sbjct: 225 NMSEILKLLYRMRGDGLRPDQQTFGASLSVSGTMCDLEMGRMLHCQIVKTGFDVDMHLKT 284
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
+++MY + E RV I +KDV+ W +I+ K+ + F EM+ S
Sbjct: 285 ALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISGLMRLGRAEKALIVFSEMLQSGSDL 344
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
+ AS++ASC SF G +H ++ R D N+L+ MYAKCG + + +
Sbjct: 345 SSE-AIASVVASCAQLGSFDLGASVHGYVLRHGYTLDTPALNSLITMYAKCGHLDKSLVI 403
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKP-DSVTFTGLLIACNHSGM 416
F +M+ R+L+SWN +I+ + + +A+ +FE+MK + V+ DS T LL AC+ +G
Sbjct: 404 FERMNERDLVSWNAIISGYAQNVDLCKALLLFEEMKFKTVQQVDSFTVVSLLQACSSAGA 463
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
+ G L + ++ I P + L+DM + G L + + D V G L+
Sbjct: 464 LPVGKLIHCIVIRSF-IRPCSLVDTALVDMYSKCGYLEAAQRCFDSI-SWKDVVSWGILI 521
Query: 477 SACRVHGNMAIG 488
+ HG I
Sbjct: 522 AGYGFHGKGDIA 533
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 173/380 (45%), Gaps = 8/380 (2%)
Query: 79 GEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
G+H L FS M K+LP+ F F S L ACASL+ L G IH L +G++S ++S
Sbjct: 25 GDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQRLSFGLSIHQQVLVNGFSSDFYIS 84
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+SL+ +Y K G + A V+ + V + A+I + + + M +G
Sbjct: 85 SSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGCYSRAGIVGEACSLVNEMRFQGIK 144
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
P + + +L + + LH AV DC + N ++++Y + + + + +
Sbjct: 145 PGPVTLLEMLSGVLEITQLQC---LHDFAVIYGFDCDIAVMNSMLNLYCKCDHVGDAKDL 201
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F ++ +D++SWNT+I+ ++ + + M + +RPD TF + L+
Sbjct: 202 FDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMRGD-GLRPDQQTFGASLSVSGTMCD 260
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G+ +H + +T D+ + AL+ MY KCG +++V + ++++ W MI+
Sbjct: 261 LEMGRMLHCQIVKTGFDVDMHLKTALITMYLKCGKEEASYRVLETIPNKDVVCWTVMISG 320
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
G E+A+ +F +M G S ++ +C G G + +G
Sbjct: 321 LMRLGRAEKALIVFSEMLQSGSDLSSEAIASVVASCAQLGSFDLG-ASVHGYVLRHGYTL 379
Query: 436 NIGHFSCLIDMLGRAGRLSE 455
+ + LI M + G L +
Sbjct: 380 DTPALNSLITMYAKCGHLDK 399
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 125/251 (49%), Gaps = 4/251 (1%)
Query: 154 VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDD 213
+ +SV ++ +N+ I+ + + ++ F ML +PD F+F LL +L
Sbjct: 2 IRTSSVLNSTKYFNSHINHLSSHGDHKQVLSTFSSMLANKLLPDTFTFPSLLKACASLQR 61
Query: 214 FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINA 273
G+S+H Q + I + ++++YA+F + +VF ++++DV+ W +I
Sbjct: 62 LSFGLSIHQQVLVNGFSSDFYISSSLVNLYAKFGLLAHARKVFEEMRERDVVHWTAMIGC 121
Query: 274 FSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW 333
+S G++ EM + I+P T +L+ + +H F
Sbjct: 122 YSRAGIVGEACSLVNEMRFQ-GIKPGPVTLLEMLSGVL---EITQLQCLHDFAVIYGFDC 177
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK 393
D+ V N+++N+Y KC +G A +F +M R+++SWNTMI+ + + G +++ +M+
Sbjct: 178 DIAVMNSMLNLYCKCDHVGDAKDLFDQMEQRDMVSWNTMISGYASVGNMSEILKLLYRMR 237
Query: 394 AEGVKPDSVTF 404
+G++PD TF
Sbjct: 238 GDGLRPDQQTF 248
>AT4G14850.1 | Symbols: LOI1, MEF11 | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8513947-8516275 FORWARD
LENGTH=684
Length = 684
Score = 291 bits (744), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 178/551 (32%), Positives = 283/551 (51%), Gaps = 13/551 (2%)
Query: 4 ETIGTLLQRC--SKTMTFG--LHAAVLK-IGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
+ +G LL+ + +M G +HA ++K + F++N L+NMY K AR V
Sbjct: 7 DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLVLR 66
Query: 59 GMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQ 115
RN VSW+++ISG Q G AL F +M+ V+PN+F F A ASLR V
Sbjct: 67 LTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVT 126
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G+QIH L+++ G FV S MY K DA ++ N ++NA IS V
Sbjct: 127 GKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVT 186
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ P + E F + P+ +F L ++ GM LH ++ D +
Sbjct: 187 DGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDVSV 246
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF-SHFDDQGKSFLFFKEMMNEC 294
N ++ Y + I +F + K+ +SW +L+ A+ + +D+ S L+ + +
Sbjct: 247 CNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKD-- 304
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
+ DF +S+L++C A G+ IHA + + V +ALV+MY KCG I +
Sbjct: 305 IVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDS 364
Query: 355 HKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV--KPDSVTFTGLLIACN 412
+ F +M +NL++ N++I + + G + A+ +FE+M G P+ +TF LL AC+
Sbjct: 365 EQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACS 424
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL 472
+G V G F+SM + YGI P H+SC++DMLGRAG + E+I K V
Sbjct: 425 RAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVW 484
Query: 473 GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGS 532
G+L +ACR+HG +G A+ L ++ P + +VLLSN +A+ G W E + R+ LKG
Sbjct: 485 GALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGV 544
Query: 533 GLRKEPGYAWL 543
G++K GY+W+
Sbjct: 545 GIKKGAGYSWI 555
>AT3G50420.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:18710871-18713649 REVERSE
LENGTH=794
Length = 794
Score = 290 bits (742), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 172/549 (31%), Positives = 289/549 (52%), Gaps = 11/549 (2%)
Query: 5 TIGTLLQRCSKT----MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +L+Q C+ M L++ ++K+G +V V +L MY CG + AR++FD +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQ 117
+ R+ V+W+ MI G + + L F M V P +F ++ L+ C+ L + G+
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGK 320
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
IH + S + + N+L+ MY CG +A V+ N VS+N++ISG EN
Sbjct: 321 LIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENG 380
Query: 178 EPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
E+ +++ +L+ PD ++F + + + F G LH Q KL + + +G
Sbjct: 381 FGEQAMLMYRRLLRMSTPRPDEYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVG 440
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
++SMY + E +VF +++++DV+ W +I S + + FF EM E +
Sbjct: 441 TTLLSMYFKNREAESAQKVFDVMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKN- 499
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
R D F+ +S++ +C+ A G+ H RT + V ALV+MY K G A
Sbjct: 500 RSDGFSLSSVIGACSDMAMLRQGEVFHCLAIRTGFDCVMSVCGALVDMYGKNGKYETAET 559
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
+FS S +L WN+M+ A+ HG+ E+A+ FEQ+ G PD+VT+ LL AC+H G
Sbjct: 560 IFSLASNPDLKCWNSMLGAYSQHGMVEKALSFFEQILENGFMPDAVTYLSLLAACSHRGS 619
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL-GSL 475
+G +N M+ GI H+SC+++++ +AG + E E I + N+ L +L
Sbjct: 620 TLQGKFLWNQMKEQ-GIKAGFKHYSCMVNLVSKAGLVDEALELIEQSPPGNNQAELWRTL 678
Query: 476 LSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR 535
LSAC N+ IG A+ +L++ P T+ ++LLSNLYA +G W +V R+ ++G
Sbjct: 679 LSACVNTRNLQIGLYAAEQILKLDPEDTATHILLSNLYAVNGRWEDVAEMRRKIRGLASS 738
Query: 536 KEPGYAWLK 544
K+PG +W++
Sbjct: 739 KDPGLSWIE 747
Score = 200 bits (509), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/484 (28%), Positives = 237/484 (48%), Gaps = 16/484 (3%)
Query: 8 TLLQRCSKTMTFGLHAAVLKIGLQSHV---FVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
T+L+R + +HA VL G + + +N L++MYV+CG + ARKVFD M RN
Sbjct: 108 TVLKRARQ-----IHALVLTAGAGAATESPYANNNLISMYVRCGSLEQARKVFDKMPHRN 162
Query: 65 TVSWSAMISGYDQCGEHW-MALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIH 120
VS++A+ S Y + + A L + M V PN F S + CA L ++ G ++
Sbjct: 163 VVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSSTFTSLVQVCAVLEDVLMGSSLN 222
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
++ GY+ V S++ MY CG A ++ ++V++N +I G ++N + E
Sbjct: 223 SQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCVNNRDAVAWNTMIVGSLKNDKIE 282
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQA-VKLALDCTPLIGNVI 239
G F+ ML G P +F++ +L + L + G +H + V +L PL N +
Sbjct: 283 DGLMFFRNMLMSGVDPTQFTYSIVLNGCSKLGSYSLGKLIHARIIVSDSLADLPL-DNAL 341
Query: 240 MSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
+ MY + E VF I + +++SWN++I+ S ++ L ++ ++ + RPD
Sbjct: 342 LDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSENGFGEQAMLMYRRLLRMSTPRPD 401
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
++TF++ +++ F+HGK +H + + V V L++MY K A KVF
Sbjct: 402 EYTFSAAISATAEPERFVHGKLLHGQVTKLGYERSVFVGTTLLSMYFKNREAESAQKVFD 461
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
M R+++ W MI G E A++ F +M E + D + + ++ AC+ M+R+
Sbjct: 462 VMKERDVVLWTEMIVGHSRLGNSELAVQFFIEMYREKNRSDGFSLSSVIGACSDMAMLRQ 521
Query: 420 GDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSAC 479
G++ F+ + G + L+DM G+ G+ E E I D S+L A
Sbjct: 522 GEV-FHCLAIRTGFDCVMSVCGALVDMYGKNGKY-ETAETIFSLASNPDLKCWNSMLGAY 579
Query: 480 RVHG 483
HG
Sbjct: 580 SQHG 583
Score = 186 bits (472), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 199/392 (50%), Gaps = 15/392 (3%)
Query: 33 HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG------EHWMALH 86
+ + +N L++MYV+C + ARKVFD M +RN V+ + + ++ + L
Sbjct: 21 YPYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLG 80
Query: 87 LFSQMKVLPNEFVFASTLS---ACASLRALVQGQQIHGLSLRSGYASIS---FVSNSLIT 140
F + +P + +S + C S+ L + +QIH L L +G + + + +N+LI+
Sbjct: 81 SFQMIFFMPLNEIASSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANNNLIS 140
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE-PEKGFEVFKLMLQEGFVPDRF 199
MY++CG A V+ N VSYNAL S + N + F + M E P+
Sbjct: 141 MYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVKPNSS 200
Query: 200 SFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLI 259
+F L+ L+D G SL+ Q +KL ++ ++ MY+ +E R+F +
Sbjct: 201 TFTSLVQVCAVLEDVLMGSSLNSQIIKLGYSDNVVVQTSVLGMYSSCGDLESARRIFDCV 260
Query: 260 QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHG 319
++D ++WNT+I D +FF+ M+ + P FT++ +L C+ S+ G
Sbjct: 261 NNRDAVAWNTMIVGSLKNDKIEDGLMFFRNMLMS-GVDPTQFTYSIVLNGCSKLGSYSLG 319
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH 379
K IHA + + D+ + NAL++MY CG + A VF ++ NL+SWN++I+ +
Sbjct: 320 KLIHARIIVSDSLADLPLDNALLDMYCSCGDMREAFYVFGRIHNPNLVSWNSIISGCSEN 379
Query: 380 GLGERAIEIFEQ-MKAEGVKPDSVTFTGLLIA 410
G GE+A+ ++ + ++ +PD TF+ + A
Sbjct: 380 GFGEQAMLMYRRLLRMSTPRPDEYTFSAAISA 411
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 19/193 (9%)
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF----------SHFDDQGK 282
P N ++SMY + + +E+ +VF + +++++ L F S G
Sbjct: 22 PYANNNLISMYVRCSSLEQARKVFDKMPQRNIVTLFGLSAVFEYVSMGSSLHSQIIKLGS 81
Query: 283 SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT---RQYWDVGVHN 339
+ F +NE + + + C +QIHA + +N
Sbjct: 82 FQMIFFMPLNEIA-----SSVVELTRKCVSITVLKRARQIHALVLTAGAGAATESPYANN 136
Query: 340 ALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG-NHGLGERAIEIFEQMKAEGVK 398
L++MY +CGS+ A KVF KM +RN++S+N + +A+ N A + M E VK
Sbjct: 137 NLISMYVRCGSLEQARKVFDKMPHRNVVSYNALYSAYSRNPDFASYAFPLTTHMAFEYVK 196
Query: 399 PDSVTFTGLLIAC 411
P+S TFT L+ C
Sbjct: 197 PNSSTFTSLVQVC 209
>AT1G25360.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:8894428-8896800 FORWARD
LENGTH=790
Length = 790
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 182/639 (28%), Positives = 302/639 (47%), Gaps = 106/639 (16%)
Query: 10 LQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE------- 62
L+R S + +H ++ G Q + N+L+++Y K + AR++FD +SE
Sbjct: 25 LRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIART 84
Query: 63 --------------------------RNTVSWSAMISGYDQCGEHWMALHLFSQMK---V 93
R+TV ++AMI+G+ + + A++LF +MK
Sbjct: 85 TMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGF 144
Query: 94 LPNEFVFASTLSACASLRALVQGQ--QIHGLSLRSGYASISFVSNSLITMYMKCGQCSD- 150
P+ F FAS L+ A L A + Q Q H +L+SG I+ VSN+L+++Y KC
Sbjct: 145 KPDNFTFASVLAGLA-LVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSL 203
Query: 151 ---ALSVYANSVGTNS--------------------------------VSYNALISGFVE 175
A V+ + + V+YNA+ISG+V
Sbjct: 204 LHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVN 263
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
++ E+ + M+ G D F++ ++ + G +H ++ D +
Sbjct: 264 RGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFSFHF 322
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM----- 290
N ++S+Y + +E +F + KD++SWN L++ + G++ L FKEM
Sbjct: 323 DNSLVSLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNI 382
Query: 291 -------------------------MNECSIRPDDFTFASILASCTWHASFLHGKQIHAF 325
M P D+ F+ + SC ++ +G+Q HA
Sbjct: 383 LSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQ 442
Query: 326 LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERA 385
L + + NAL+ MYAKCG + A +VF M + +SWN +IAA G HG G A
Sbjct: 443 LLKIGFDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEA 502
Query: 386 IEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLID 445
++++E+M +G++PD +T +L AC+H+G+V +G YF+SME Y I P H++ LID
Sbjct: 503 VDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLID 562
Query: 446 MLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSP 505
+L R+G+ S+ E I + +LLS CRVHGNM +G A L + P
Sbjct: 563 LLCRSGKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGT 622
Query: 506 YVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
Y+LLSN++A+ G W EV RK+++ G++KE +W++
Sbjct: 623 YMLLSNMHAATGQWEEVARVRKLMRDRGVKKEVACSWIE 661
>AT2G34400.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:14516226-14518186 FORWARD
LENGTH=621
Length = 621
Score = 290 bits (741), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 160/512 (31%), Positives = 274/512 (53%), Gaps = 9/512 (1%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC-GEHWMALHLFSQMK---V 93
N L+ V+ G + +F E N S++ MI G +H AL L+ +MK +
Sbjct: 69 NFLIPKAVELGDFNYSSFLFSVTEEPNHYSFNYMIRGLTNTWNDHEAALSLYRRMKFSGL 128
Query: 94 LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS 153
P++F + ACA L + G+ +H + G +++SLI MY KCGQ A
Sbjct: 129 KPDKFTYNFVFIACAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARK 188
Query: 154 VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDD 213
++ ++VS+N++ISG+ E + ++F+ M +EGF PD + V +LG ++L D
Sbjct: 189 LFDEITERDTVSWNSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGD 248
Query: 214 FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINA 273
RTG L A+ + + +G+ ++SMY + ++ RVF + KD ++W +I
Sbjct: 249 LRTGRLLEEMAITKKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITV 308
Query: 274 FSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW 333
+S ++F F E M + + PD T +++L++C + GKQI
Sbjct: 309 YSQNGKSSEAFKLFFE-MEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQH 367
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK 393
++ V LV+MY KCG + A +VF M +N +WN MI A+ + G + A+ +F++M
Sbjct: 368 NIYVATGLVDMYGKCGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM- 426
Query: 394 AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
V P +TF G+L AC H+G+V +G YF+ M + +G+ P I H++ +ID+L RAG L
Sbjct: 427 --SVPPSDITFIGVLSACVHAGLVHQGCRYFHEMSSMFGLVPKIEHYTNIIDLLSRAGML 484
Query: 454 SEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTS-PYVLLSNL 512
E E++ +F D ++L ++L AC ++AI E+ ++L+E+ + YV+ SN+
Sbjct: 485 DEAWEFMERFPGKPDEIMLAAILGACHKRKDVAIREKAMRMLMEMKEAKNAGNYVISSNV 544
Query: 513 YASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
A MW+E R +++ G+ K PG +W++
Sbjct: 545 LADMKMWDESAKMRALMRDRGVVKTPGCSWIE 576
Score = 175 bits (444), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 169/313 (53%), Gaps = 12/313 (3%)
Query: 13 CSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSW 68
C+K G+ H+++ K+GL+ V +++ L+ MY KCG+V ARK+FD ++ER+TVSW
Sbjct: 142 CAKLEEIGVGRSVHSSLFKVGLERDVHINHSLIMMYAKCGQVGYARKLFDEITERDTVSW 201
Query: 69 SAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
++MISGY + G A+ LF +M+ P+E S L AC+ L L G+ + +++
Sbjct: 202 NSMISGYSEAGYAKDAMDLFRKMEEEGFEPDERTLVSMLGACSHLGDLRTGRLLEEMAIT 261
Query: 126 SGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEV 185
+F+ + LI+MY KCG A V+ + + V++ A+I+ + +N + + F++
Sbjct: 262 KKIGLSTFLGSKLISMYGKCGDLDSARRVFNQMIKKDRVAWTAMITVYSQNGKSSEAFKL 321
Query: 186 FKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ 245
F M + G PD + +L ++ G + A +L+L + ++ MY +
Sbjct: 322 FFEMEKTGVSPDAGTLSTVLSACGSVGALELGKQIETHASELSLQHNIYVATGLVDMYGK 381
Query: 246 FNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFAS 305
+EE +RVF + K+ +WN +I A++H ++ L F M S+ P D TF
Sbjct: 382 CGRVEEALRVFEAMPVKNEATWNAMITAYAHQGHAKEALLLFDRM----SVPPSDITFIG 437
Query: 306 ILASCTWHASFLH 318
+L++C HA +H
Sbjct: 438 VLSACV-HAGLVH 449
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 8/118 (6%)
Query: 5 TIGTLLQRCSKTMTFGL------HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
T+ T+L C L HA+ ++ LQ +++V+ L++MY KCGRV A +VF+
Sbjct: 336 TLSTVLSACGSVGALELGKQIETHAS--ELSLQHNIYVATGLVDMYGKCGRVEEALRVFE 393
Query: 59 GMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQG 116
M +N +W+AMI+ Y G AL LF +M V P++ F LSAC + QG
Sbjct: 394 AMPVKNEATWNAMITAYAHQGHAKEALLLFDRMSVPPSDITFIGVLSACVHAGLVHQG 451
>AT3G13770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:4519647-4521533 FORWARD
LENGTH=628
Length = 628
Score = 288 bits (736), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 151/447 (33%), Positives = 238/447 (53%), Gaps = 3/447 (0%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV 159
+ + L+AC RAL GQ++H +++ Y +++ L+ Y KC DA V
Sbjct: 55 YDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMP 114
Query: 160 GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMS 219
N VS+ A+IS + + + VF M++ P+ F+F +L G
Sbjct: 115 EKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQ 174
Query: 220 LHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDD 279
+H VK D +G+ ++ MYA+ I+E +F + ++DV+S +I ++
Sbjct: 175 IHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGL 234
Query: 280 QGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHN 339
++ F + +E + P+ T+AS+L + + A HGKQ H + R + + N
Sbjct: 235 DEEALEMFHRLHSE-GMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQN 293
Query: 340 ALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VK 398
+L++MY+KCG++ YA ++F M R ISWN M+ + HGLG +E+F M+ E VK
Sbjct: 294 SLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVK 353
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSMEAA-YGIAPNIGHFSCLIDMLGRAGRLSEVE 457
PD+VT +L C+H M G F+ M A YG P H+ C++DMLGRAGR+ E
Sbjct: 354 PDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEAF 413
Query: 458 EYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDG 517
E+I + VLGSLL ACRVH ++ IGE + + L+E+ P YV+LSNLYAS G
Sbjct: 414 EFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASAG 473
Query: 518 MWNEVTSARKMLKGSGLRKEPGYAWLK 544
W +V + R M+ + KEPG +W++
Sbjct: 474 RWADVNNVRAMMMQKAVTKEPGRSWIQ 500
Score = 165 bits (417), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 122/440 (27%), Positives = 205/440 (46%), Gaps = 39/440 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA ++K ++ +LL Y KC + ARKV D M E+N VSW+AMIS Y Q G
Sbjct: 74 VHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGH 133
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL +F++M PNEF FA+ L++C L G+QIHGL ++ Y S FV +S
Sbjct: 134 SSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSS 193
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY K GQ +A ++ + VS A+I+G+ + E+ E+F + EG P+
Sbjct: 194 LLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPN 253
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
++ LL + L G HC ++ L ++ N ++ MY++ + R+F
Sbjct: 254 YVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFD 313
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ ++ ISWN ++ +S + F+ M +E ++PD T ++L+ C+
Sbjct: 314 NMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCS------ 367
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
HG+ D G +N++ + Y K ++ + ++ G
Sbjct: 368 HGRM-----------EDTG-----LNIFDGMVAGEYGTKPGTE-------HYGCIVDMLG 404
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP-N 436
G + A E ++M + KP + LL AC V G+ + I P N
Sbjct: 405 RAGRIDEAFEFIKRMPS---KPTAGVLGSLLGACRVHLSVDIGESVGRRL---IEIEPEN 458
Query: 437 IGHFSCLIDMLGRAGRLSEV 456
G++ L ++ AGR ++V
Sbjct: 459 AGNYVILSNLYASAGRWADV 478
>AT4G20770.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:11130762-11133086 REVERSE
LENGTH=774
Length = 774
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 183/626 (29%), Positives = 304/626 (48%), Gaps = 92/626 (14%)
Query: 5 TIGTLLQRCSKTM--TFGL--HAAVLKIGLQSHVFVSNQLLNMYVKCGRVV-LARKVFDG 59
T+ ++L CSK + FG+ H +K GL ++FV N LL+MY KCG +V +VF+
Sbjct: 140 TLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFES 199
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---------KVLPNEFVFASTLSACASL 110
+S+ N VS++A+I G + + A+ +F M L N ++ C SL
Sbjct: 200 LSQPNEVSYTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSL 259
Query: 111 RALVQ---GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYN 167
+ G+QIH L+LR G+ ++NSL+ +Y K + A ++A N VS+N
Sbjct: 260 SEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWN 319
Query: 168 ALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL 227
+I GF + + +K E M GF P+ + + +LG D TG + +
Sbjct: 320 IMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVETGRRIFSSIPQP 379
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ------DKDV----------------- 264
++ N ++S Y+ + EE + FR +Q DK
Sbjct: 380 SVSAW----NAMLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTLSVILSSCARLRFLEGG 435
Query: 265 -----------ISWNT-----LINAFSHFDDQGKSFLFFKEMMNECSIR----------- 297
IS N+ LI +S + S F + +NE I
Sbjct: 436 KQIHGVVIRTEISKNSHIVSGLIAVYSECEKMEISECIFDDCINELDIACWNSMISGFRH 495
Query: 298 ---------------------PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
P++ +FA++L+SC+ S LHG+Q H + ++ D
Sbjct: 496 NMLDTKALILFRRMHQTAVLCPNETSFATVLSSCSRLCSLLHGRQFHGLVVKSGYVSDSF 555
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
V AL +MY KCG I A + F + +N + WN MI +G++G G+ A+ ++ +M + G
Sbjct: 556 VETALTDMYCKCGEIDSARQFFDAVLRKNTVIWNEMIHGYGHNGRGDEAVGLYRKMISSG 615
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
KPD +TF +L AC+HSG+V G +SM+ +GI P + H+ C++D LGRAGRL +
Sbjct: 616 EKPDGITFVSVLTACSHSGLVETGLEILSSMQRIHGIEPELDHYICIVDCLGRAGRLEDA 675
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASD 516
E+ + + V+ LLS+CRVHG++++ R+A+ L+ + P +++ YVLLSN Y+S
Sbjct: 676 EKLAEATPYKSSSVLWEILLSSCRVHGDVSLARRVAEKLMRLDPQSSAAYVLLSNTYSSL 735
Query: 517 GMWNEVTSARKMLKGSGLRKEPGYAW 542
W++ + + ++ + + K PG +W
Sbjct: 736 RQWDDSAALQGLMNKNRVHKTPGQSW 761
Score = 165 bits (418), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 113/435 (25%), Positives = 199/435 (45%), Gaps = 80/435 (18%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD---------------------- 58
+H ++++G++S ++ N+LL++Y++CG ARKVFD
Sbjct: 28 IHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMSVRDVYSWNAFLTFRCKVGD 87
Query: 59 ---------GMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSA 106
GM ER+ VSW+ MIS + G AL ++ +M LP+ F AS LSA
Sbjct: 88 LGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKRMVCDGFLPSRFTLASVLSA 147
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD-ALSVYANSVGTNSVS 165
C+ + V G + HG+++++G FV N+L++MY KCG D + V+ + N VS
Sbjct: 148 CSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGFIVDYGVRVFESLSQPNEVS 207
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRT--------- 216
Y A+I G ++ + ++F+LM ++G D +L S + +
Sbjct: 208 YTAVIGGLARENKVLEAVQMFRLMCEKGVQVDSVCLSNILSISAPREGCDSLSEIYGNEL 267
Query: 217 GMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH 276
G +HC A++L + N ++ +YA+ + +F + + +V+SWN +I F
Sbjct: 268 GKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIFAEMPEVNVVSWNIMIVGFGQ 327
Query: 277 FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
KS F M + +P++ T S+L +C FR+
Sbjct: 328 EYRSDKSVEFLTRMRDS-GFQPNEVTCISVLGAC----------------FRS------- 363
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
G + ++FS + ++ +WN M++ + N+ E AI F QM+ +
Sbjct: 364 ------------GDVETGRRIFSSIPQPSVSAWNAMLSGYSNYEHYEEAISNFRQMQFQN 411
Query: 397 VKPDSVTFTGLLIAC 411
+KPD T + +L +C
Sbjct: 412 LKPDKTTLSVILSSC 426
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 193/427 (45%), Gaps = 56/427 (13%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCG------------- 146
AS L R + G+ IHG +R G S +++ N L+ +Y++CG
Sbjct: 9 LASLLRCYRDERCKLSGKVIHGFIVRMGMKSDTYLCNRLLDLYIECGDGDYARKVFDEMS 68
Query: 147 -------------QCS-----DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
+C +A V+ + VS+N +IS V EK V+K
Sbjct: 69 VRDVYSWNAFLTFRCKVGDLGEACEVFDGMPERDVVSWNNMISVLVRKGFEEKALVVYKR 128
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
M+ +GF+P RF+ +L + + D GM H AVK LD +GN ++SMYA+ F
Sbjct: 129 MVCDGFLPSRFTLASVLSACSKVLDGVFGMRCHGVAVKTGLDKNIFVGNALLSMYAKCGF 188
Query: 249 IEEV-VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL 307
I + VRVF + + +S+ +I + + ++ F+ +M E ++ D ++IL
Sbjct: 189 IVDYGVRVFESLSQPNEVSYTAVIGGLARENKVLEAVQMFR-LMCEKGVQVDSVCLSNIL 247
Query: 308 A------SCTWHASFLH---GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
+ C + GKQIH R D+ ++N+L+ +YAK + A +F
Sbjct: 248 SISAPREGCDSLSEIYGNELGKQIHCLALRLGFGGDLHLNNSLLEIYAKNKDMNGAELIF 307
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
++M N++SWN MI FG ++++E +M+ G +P+ VT +L AC SG V
Sbjct: 308 AEMPEVNVVSWNIMIVGFGQEYRSDKSVEFLTRMRDSGFQPNEVTCISVLGACFRSGDVE 367
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN------DPVVL 472
G F+S+ P++ ++ ML EE I+ F + D L
Sbjct: 368 TGRRIFSSIP-----QPSVSAWNA---MLSGYSNYEHYEEAISNFRQMQFQNLKPDKTTL 419
Query: 473 GSLLSAC 479
+LS+C
Sbjct: 420 SVILSSC 426
>AT3G61170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:22638691-22641237 REVERSE
LENGTH=783
Length = 783
Score = 286 bits (732), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 166/549 (30%), Positives = 278/549 (50%), Gaps = 45/549 (8%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+G++L+ C+ + +H +K G V V N LL MY +C R+ A +F+ M
Sbjct: 127 TLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEAEYLFETM 186
Query: 61 S-ERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQG 116
E+N V+W++M++GY Q G + A+ F ++ N++ F S L+ACAS+ A G
Sbjct: 187 EGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGNQSNQYTFPSVLTACASVSACRVG 246
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
Q+H ++SG+ + +V ++LI MY KC + A ++ + VS+N++I G V
Sbjct: 247 VQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNSMIVGCVRQ 306
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLG-FSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ +F M + D F+ +L F+ + + + S HC VK L+
Sbjct: 307 GLIGEALSMFGRMHERDMKIDDFTIPSILNCFALSRTEMKIASSAHCLIVKTGYATYKLV 366
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
N ++ MYA+ ++ ++VF + +KDVISW L+ +H ++ F M
Sbjct: 367 NNALVDMYAKRGIMDSALKVFEGMIEKDVISWTALVTGNTHNGSYDEALKLFCNM-RVGG 425
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
I PD AS+L++ G+Q+H ++ + V+N+LV MY KCGS+ A+
Sbjct: 426 ITPDKIVTASVLSASAELTLLEFGQQVHGNYIKSGFPSSLSVNNSLVTMYTKCGSLEDAN 485
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
+F+ M R+LI+W +I + +GL E A
Sbjct: 486 VIFNSMEIRDLITWTCLIVGYAKNGLLEDA------------------------------ 515
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
YF+SM YGI P H++C+ID+ GR+G +VE+ +++ D V ++
Sbjct: 516 -----QRYFDSMRTVYGITPGPEHYACMIDLFGRSGDFVKVEQLLHQMEVEPDATVWKAI 570
Query: 476 LSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR 535
L+A R HGN+ GER AK L+E+ P PYV LSN+Y++ G +E + R+++K +
Sbjct: 571 LAASRKHGNIENGERAAKTLMELEPNNAVPYVQLSNMYSAAGRQDEAANVRRLMKSRNIS 630
Query: 536 KEPGYAWLK 544
KEPG +W++
Sbjct: 631 KEPGCSWVE 639
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 143/277 (51%), Gaps = 2/277 (0%)
Query: 133 FVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE 192
F N++I Y + SDA ++ ++ N++S+NALISG+ ++ + F +F M +
Sbjct: 60 FTWNTMIVAYSNSRRLSDAEKLFRSNPVKNTISWNALISGYCKSGSKVEAFNLFWEMQSD 119
Query: 193 GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
G P+ ++ +L T+L G +H +K D + N +++MYAQ I E
Sbjct: 120 GIKPNEYTLGSVLRMCTSLVLLLRGEQIHGHTIKTGFDLDVNVVNGLLAMYAQCKRISEA 179
Query: 253 VRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
+F ++ +K+ ++W +++ +S K+ F+++ E + + + +TF S+L +C
Sbjct: 180 EYLFETMEGEKNNVTWTSMLTGYSQNGFAFKAIECFRDLRREGN-QSNQYTFPSVLTACA 238
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNT 371
++ G Q+H + ++ ++ V +AL++MYAKC + A + M +++SWN+
Sbjct: 239 SVSACRVGVQVHCCIVKSGFKTNIYVQSALIDMYAKCREMESARALLEGMEVDDVVSWNS 298
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
MI GL A+ +F +M +K D T +L
Sbjct: 299 MIVGCVRQGLIGEALSMFGRMHERDMKIDDFTIPSIL 335
>AT3G05340.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1524071-1526047 REVERSE
LENGTH=658
Length = 658
Score = 285 bits (730), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 163/514 (31%), Positives = 267/514 (51%), Gaps = 5/514 (0%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKV 93
+ V N LL++Y KCG++V A K+FD M R+ +S + + G+ + E L +M +
Sbjct: 90 LVVWNSLLSLYAKCGKLVDAIKLFDEMPMRDVISQNIVFYGFLRNRETESGFVLLKRM-L 148
Query: 94 LPNEFVFAS---TLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
F A+ LS C + + + IH L++ SGY V N LIT Y KCG
Sbjct: 149 GSGGFDHATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVS 208
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
V+ N ++ A+ISG +EN E G +F LM + P+ +++ L +
Sbjct: 209 GRGVFDGMSHRNVITLTAVISGLIENELHEDGLRLFSLMRRGLVHPNSVTYLSALAACSG 268
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
G +H K ++ I + +M MY++ IE+ +F + D +S +
Sbjct: 269 SQRIVEGQQIHALLWKYGIESELCIESALMDMYSKCGSIEDAWTIFESTTEVDEVSMTVI 328
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
+ + + ++ FF M+ + + D +++L S GKQ+H+ + + +
Sbjct: 329 LVGLAQNGSEEEAIQFFIRML-QAGVEIDANVVSAVLGVSFIDNSLGLGKQLHSLVIKRK 387
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
+ V+N L+NMY+KCG + + VF +M RN +SWN+MIAAF HG G A++++E
Sbjct: 388 FSGNTFVNNGLINMYSKCGDLTDSQTVFRRMPKRNYVSWNSMIAAFARHGHGLAALKLYE 447
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
+M VKP VTF LL AC+H G++ KG N M+ +GI P H++C+IDMLGRA
Sbjct: 448 EMTTLEVKPTDVTFLSLLHACSHVGLIDKGRELLNEMKEVHGIEPRTEHYTCIIDMLGRA 507
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
G L E + +I+ D + +LL AC HG+ +GE A+ L + P ++S ++L++
Sbjct: 508 GLLKEAKSFIDSLPLKPDCKIWQALLGACSFHGDTEVGEYAAEQLFQTAPDSSSAHILIA 567
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
N+Y+S G W E K +K G+ KE G + ++
Sbjct: 568 NIYSSRGKWKERAKTIKRMKAMGVTKETGISSIE 601
>AT1G68930.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:25918314-25920545 FORWARD LENGTH=743
Length = 743
Score = 285 bits (729), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 162/548 (29%), Positives = 268/548 (48%), Gaps = 35/548 (6%)
Query: 31 QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQ 90
Q ++F N LL Y K G + F+ + +R+ V+W+ +I GY G A+ ++
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNT 128
Query: 91 M----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCG 146
M + L +S + G+QIHG ++ G+ S V + L+ MY G
Sbjct: 129 MMRDFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVG 188
Query: 147 QCSDALSVYANSVGTNSVSYN------------------------------ALISGFVEN 176
SDA V+ N+V YN A+I G +N
Sbjct: 189 CISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQN 248
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
++ E F+ M +G D++ F +L L G +H ++ +G
Sbjct: 249 GLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVG 308
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
+ ++ MY + + VF ++ K+V+SW ++ + ++ F +M I
Sbjct: 309 SALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDM-QRSGI 367
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
PD +T +++C +S G Q H + V V N+LV +Y KCG I + +
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
+F++M+ R+ +SW M++A+ G I++F++M G+KPD VT TG++ AC+ +G+
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
V KG YF M + YGI P+IGH+SC+ID+ R+GRL E +IN D + +LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
SACR GN+ IG+ A+ L+E+ P + Y LLS++YAS G W+ V R+ ++ ++K
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 537 EPGYAWLK 544
EPG +W+K
Sbjct: 608 EPGQSWIK 615
Score = 164 bits (415), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 197/407 (48%), Gaps = 43/407 (10%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT--------------- 65
+H V+K+G +S++ V + LL MY G + A+KVF G+ +RNT
Sbjct: 161 IHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVFYGLDDRNTVMYNSLMGGLLACGM 220
Query: 66 ---------------VSWSAMISGYDQCGEHWMALHLFSQMKVLP---NEFVFASTLSAC 107
VSW+AMI G Q G A+ F +MKV +++ F S L AC
Sbjct: 221 IEDALQLFRGMEKDSVSWAAMIKGLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPAC 280
Query: 108 ASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYN 167
L A+ +G+QIH +R+ + +V ++LI MY KC A +V+ N VS+
Sbjct: 281 GGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWT 340
Query: 168 ALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL 227
A++ G+ + E+ ++F M + G PD ++ + N+ G H +A+
Sbjct: 341 AMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITS 400
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
L + N ++++Y + I++ R+F + +D +SW +++A++ F ++ F
Sbjct: 401 GLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLF 460
Query: 288 KEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNM 344
+M+ ++PD T ++++C+ G++ F T +Y +G ++ ++++
Sbjct: 461 DKMVQH-GLKPDGVTLTGVISACSRAGLVEKGQRY--FKLMTSEYGIVPSIGHYSCMIDL 517
Query: 345 YAKCGSIGYAHKVFSKMSY-RNLISWNTMIAAFGNHG---LGERAIE 387
+++ G + A + + M + + I W T+++A N G +G+ A E
Sbjct: 518 FSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAE 564
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH 379
K IH + R Y + ++N +V+ YA S YA +VF ++ NL SWN ++ A+
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
GL FE++ D VT+ L+ + SG+V +N+M
Sbjct: 86 GLISEMESTFEKLPDR----DGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
>AT2G22410.1 | Symbols: SLO1 | SLOW GROWTH 1 | chr2:9509035-9511080
FORWARD LENGTH=681
Length = 681
Score = 285 bits (728), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 171/571 (29%), Positives = 277/571 (48%), Gaps = 39/571 (6%)
Query: 8 TLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVL--ARKVFDGMSERN 64
+LL++C + + A ++ GL F S++L+ L + K+ G+ N
Sbjct: 58 SLLEKCKLLLHLKQIQAQMIINGLILDPFASSRLIAFCALSESRYLDYSVKILKGIENPN 117
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQM------KVLPNEFVFASTLSACASLRALVQGQQ 118
SW+ I G+ + + L+ QM + P+ F + CA LR G
Sbjct: 118 IFSWNVTIRGFSESENPKESFLLYKQMLRHGCCESRPDHFTYPVLFKVCADLRLSSLGHM 177
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
I G L+ +S V N+ I M+ CG +A V+ S + VS+N LI+G+ + E
Sbjct: 178 ILGHVLKLRLELVSHVHNASIHMFASCGDMENARKVFDESPVRDLVSWNCLINGYKKIGE 237
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
EK V+KLM EG PD + +GL+ + L D G + + L T + N
Sbjct: 238 AEKAIYVYKLMESEGVKPDDVTMIGLVSSCSMLGDLNRGKEFYEYVKENGLRMTIPLVNA 297
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH----------FDD--------- 279
+M M+++ I E R+F ++ + ++SW T+I+ ++ FDD
Sbjct: 298 LMDMFSKCGDIHEARRIFDNLEKRTIVSWTTMISGYARCGLLDVSRKLFDDMEEKDVVLW 357
Query: 280 -----------QGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
+G+ L + M + +PD+ T L++C+ + G IH ++ +
Sbjct: 358 NAMIGGSVQAKRGQDALALFQEMQTSNTKPDEITMIHCLSACSQLGALDVGIWIHRYIEK 417
Query: 329 TRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEI 388
+V + +LV+MYAKCG+I A VF + RN +++ +I HG AI
Sbjct: 418 YSLSLNVALGTSLVDMYAKCGNISEALSVFHGIQTRNSLTYTAIIGGLALHGDASTAISY 477
Query: 389 FEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
F +M G+ PD +TF GLL AC H GM++ G YF+ M++ + + P + H+S ++D+LG
Sbjct: 478 FNEMIDAGIAPDEITFIGLLSACCHGGMIQTGRDYFSQMKSRFNLNPQLKHYSIMVDLLG 537
Query: 449 RAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVL 508
RAG L E + + D V G+LL CR+HGN+ +GE+ AK LLE+ P + YVL
Sbjct: 538 RAGLLEEADRLMESMPMEADAAVWGALLFGCRMHGNVELGEKAAKKLLELDPSDSGIYVL 597
Query: 509 LSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
L +Y MW + AR+M+ G+ K PG
Sbjct: 598 LDGMYGEANMWEDAKRARRMMNERGVEKIPG 628
>AT3G11460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:3608250-3610121 FORWARD
LENGTH=623
Length = 623
Score = 284 bits (727), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 157/452 (34%), Positives = 242/452 (53%), Gaps = 3/452 (0%)
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
P+ F F L +CASL V GQQ+H + G + FV +LI+MY KCG +DA V
Sbjct: 51 PDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALISMYCKCGLVADARKV 110
Query: 155 YANSVGTN--SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
+ + ++ SV YNALISG+ N + +F+ M + G D + +GL+ T +
Sbjct: 111 FEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPE 170
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
G SLH Q VK LD + N ++MY + +E R+F + K +I+WN +I+
Sbjct: 171 YLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVIS 230
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
+S + L E M + PD FT S+L+SC + G ++ +
Sbjct: 231 GYSQ-NGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFV 289
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
+V V NA ++MYA+CG++ A VF M ++L+SW MI +G HG+GE + +F+ M
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDM 349
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
G++PD F +L AC+HSG+ KG F +M+ Y + P H+SCL+D+LGRAGR
Sbjct: 350 IKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKLEPGPEHYSCLVDLLGRAGR 409
Query: 453 LSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNL 512
L E E+I D V G+LL AC++H N+ + E ++E P YVL+SN+
Sbjct: 410 LDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAFAKVIEFEPNNIGYYVLMSNI 469
Query: 513 YASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
Y+ + R M++ RK+PGY++++
Sbjct: 470 YSDSKNQEGIWRIRVMMRERAFRKKPGYSYVE 501
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 174/409 (42%), Gaps = 39/409 (9%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD--GMSERNTVSWSAMISGYDQC 78
LH V K G ++ FV L++MY KCG V ARKVF+ S + +V ++A+ISGY
Sbjct: 75 LHCHVTKGGCETEPFVLTALISMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTAN 134
Query: 79 GEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
+ A ++F +MK V + + C L G+ +HG ++ G S V
Sbjct: 135 SKVTDAAYMFRRMKETGVSVDSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVL 194
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
NS ITMYMKCG ++ +++NA+ISG+ +N E+++ M G
Sbjct: 195 NSFITMYMKCGSVEAGRRLFDEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVC 254
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD F+ V +L +L + G + + N +SMYA+ + + V
Sbjct: 255 PDPFTLVSVLSSCAHLGAKKIGHEVGKLVESNGFVPNVFVSNASISMYARCGNLAKARAV 314
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F ++ K ++SW +I + + F +M+ IRPD F +L++C+ S
Sbjct: 315 FDIMPVKSLVSWTAMIGCYGMHGMGEIGLMLFDDMIKR-GIRPDGAVFVMVLSACS--HS 371
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
L K + F R+Y G H ++ ++
Sbjct: 372 GLTDKGLELFRAMKREYKL---------------EPGPEH-------------YSCLVDL 403
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYF 424
G G + A+E E M V+PD + LL AC V +L F
Sbjct: 404 LGRAGRLDEAMEFIESMP---VEPDGAVWGALLGACKIHKNVDMAELAF 449
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 131/277 (47%), Gaps = 4/277 (1%)
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ +++ ML+ G PD FSF +L +L +G LHC K + P + ++
Sbjct: 36 ESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKGGCETEPFVLTALI 95
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVIS--WNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
SMY + + + +VF +S +N LI+ ++ + F+ M E +
Sbjct: 96 SMYCKCGLVADARKVFEENPQSSQLSVCYNALISGYTANSKVTDAAYMFRR-MKETGVSV 154
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D T ++ CT G+ +H + +V V N+ + MY KCGS+ ++F
Sbjct: 155 DSVTMLGLVPLCTVPEYLWLGRSLHGQCVKGGLDSEVAVLNSFITMYMKCGSVEAGRRLF 214
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
+M + LI+WN +I+ + +GL +E++EQMK+ GV PD T +L +C H G +
Sbjct: 215 DEMPVKGLITWNAVISGYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKK 274
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
G +E+ G PN+ + I M R G L++
Sbjct: 275 IGHEVGKLVESN-GFVPNVFVSNASISMYARCGNLAK 310
>AT1G69350.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26069882-26072245 FORWARD
LENGTH=787
Length = 787
Score = 283 bits (724), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 168/514 (32%), Positives = 276/514 (53%), Gaps = 14/514 (2%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVL 94
N LL MY KCG ++ + ++F+ ++++N VSW+AMIS Y++ AL FS+M +
Sbjct: 241 NSLLTMYSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMIKSGIE 300
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLR----SGYASISFVSNSLITMYMKCGQCSD 150
PN S LS+C + + +G+ +HG ++R Y S+S +L+ +Y +CG+ SD
Sbjct: 301 PNLVTLYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL---ALVELYAECGKLSD 357
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
+V N V++N+LIS + + +F+ M+ + PD F+ + N
Sbjct: 358 CETVLRVVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACEN 417
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
G +H ++ + + N ++ MY++ ++ VF I+ + V++WN++
Sbjct: 418 AGLVPLGKQIHGHVIRTDVS-DEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSM 476
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
+ FS + ++ F + M + ++ TF +++ +C+ S GK +H L
Sbjct: 477 LCGFSQNGNSVEAISLF-DYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLI-IS 534
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
D+ AL++MYAKCG + A VF MS R+++SW++MI A+G HG AI F
Sbjct: 535 GLKDLFTDTALIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFN 594
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
QM G KP+ V F +L AC HSG V +G YFN M++ +G++PN HF+C ID+L R+
Sbjct: 595 QMVESGTKPNEVVFMNVLSACGHSGSVEEGKYYFNLMKS-FGVSPNSEHFACFIDLLSRS 653
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
G L E I + L D V GSL++ CR+H M I + + L ++ T Y LLS
Sbjct: 654 GDLKEAYRTIKEMPFLADASVWGSLVNGCRIHQKMDIIKAIKNDLSDIVTDDTGYYTLLS 713
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
N+YA +G W E R +K S L+K PGY+ ++
Sbjct: 714 NIYAEEGEWEEFRRLRSAMKSSNLKKVPGYSAIE 747
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 129/488 (26%), Positives = 229/488 (46%), Gaps = 21/488 (4%)
Query: 9 LLQRCSK-TMTFGLHAAVLKIG-LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTV 66
L + CS + LHA +L G L+ +L+ Y G +R VF+ ++
Sbjct: 7 LFRSCSSLRLVSQLHAHLLVTGRLRRDPLPVTKLIESYAFMGSPDSSRLVFEAFPYPDSF 66
Query: 67 SWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRA-LVQGQQIHGL 122
+ +I C A+ L+ ++ ++FVF S L ACA R L G ++HG
Sbjct: 67 MYGVLIKCNVWCHLLDAAIDLYHRLVSETTQISKFVFPSVLRACAGSREHLSVGGKVHGR 126
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKG 182
++ G + + SL+ MY + G SDA V+ + V+++ L+S +EN E K
Sbjct: 127 IIKGGVDDDAVIETSLLCMYGQTGNLSDAEKVFDGMPVRDLVAWSTLVSSCLENGEVVKA 186
Query: 183 FEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
+FK M+ +G PD + + ++ L R S+H Q + D + N +++M
Sbjct: 187 LRMFKCMVDDGVEPDAVTMISVVEGCAELGCLRIARSVHGQITRKMFDLDETLCNSLLTM 246
Query: 243 YAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
Y++ + R+F I K+ +SW +I++++ + K+ F EM+ + I P+ T
Sbjct: 247 YSKCGDLLSSERIFEKIAKKNAVSWTAMISSYNRGEFSEKALRSFSEMI-KSGIEPNLVT 305
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTR---QYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
S+L+SC GK +H F R Y + + ALV +YA+CG + V
Sbjct: 306 LYSVLSSCGLIGLIREGKSVHGFAVRRELDPNYESLSL--ALVELYAECGKLSDCETVLR 363
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
+S RN+++WN++I+ + + G+ +A+ +F QM + +KPD+ T + AC ++G+V
Sbjct: 364 VVSDRNIVAWNSLISLYAHRGMVIQALGLFRQMVTQRIKPDAFTLASSISACENAGLVPL 423
Query: 420 GDLYFNSMEAAYGIAPNIGHF---SCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
G + I ++ + LIDM ++G + N+ H V S+L
Sbjct: 424 GKQIH-----GHVIRTDVSDEFVQNSLIDMYSKSGSVDSASTVFNQIKH-RSVVTWNSML 477
Query: 477 SACRVHGN 484
+GN
Sbjct: 478 CGFSQNGN 485
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 99/188 (52%), Gaps = 5/188 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V++ + S FV N L++MY K G V A VF+ + R+ V+W++M+ G+ Q G
Sbjct: 427 IHGHVIRTDV-SDEFVQNSLIDMYSKSGSVDSASTVFNQIKHRSVVTWNSMLCGFSQNGN 485
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
A+ LF M + NE F + + AC+S+ +L +G+ +H + SG + F +
Sbjct: 486 SVEAISLFDYMYHSYLEMNEVTFLAVIQACSSIGSLEKGKWVHHKLIISGLKDL-FTDTA 544
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
LI MY KCG + A +V+ + VS++++I+ + + F M++ G P+
Sbjct: 545 LIDMYAKCGDLNAAETVFRAMSSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPN 604
Query: 198 RFSFVGLL 205
F+ +L
Sbjct: 605 EVVFMNVL 612
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T ++Q CS + +H ++ GL+ +F L++MY KCG + A VF M
Sbjct: 507 TFLAVIQACSSIGSLEKGKWVHHKLIISGLKD-LFTDTALIDMYAKCGDLNAAETVFRAM 565
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQ 117
S R+ VSWS+MI+ Y G A+ F+QM PNE VF + LSAC ++ +G+
Sbjct: 566 SSRSIVSWSSMINAYGMHGRIGSAISTFNQMVESGTKPNEVVFMNVLSACGHSGSVEEGK 625
>AT2G04860.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:1706787-1708865 REVERSE
LENGTH=692
Length = 692
Score = 283 bits (723), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 165/513 (32%), Positives = 268/513 (52%), Gaps = 3/513 (0%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H K GL+ V N L++ Y KC + A +F M +++TVSW+ MI Y Q G
Sbjct: 173 VHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGL 232
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
A+ +F M + V S ++ L A V + +H L ++ G + V SL+
Sbjct: 233 QEEAITVFKNMF---EKNVEISPVTIINLLSAHVSHEPLHCLVVKCGMVNDISVVTSLVC 289
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
Y +CG A +YA++ + V +++S + E + + F Q D +
Sbjct: 290 AYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKTRQLCMKIDAVA 349
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
VG+L GMSLH A+K L L+ N +++MY++F+ +E V+ +F +Q
Sbjct: 350 LVGILHGCKKSSHIDIGMSLHGYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQ 409
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGK 320
+ +ISWN++I+ +F F +MM + PD T AS+LA C+ GK
Sbjct: 410 ETPLISWNSVISGCVQSGRASTAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGK 469
Query: 321 QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHG 380
++H + R + V AL++MYAKCG+ A VF + +WN+MI+ + G
Sbjct: 470 ELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSIKAPCTATWNSMISGYSLSG 529
Query: 381 LGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHF 440
L RA+ + +M+ +G+KPD +TF G+L ACNH G V +G + F +M +GI+P + H+
Sbjct: 530 LQHRALSCYLEMREKGLKPDEITFLGVLSACNHGGFVDEGKICFRAMIKEFGISPTLQHY 589
Query: 441 SCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPP 500
+ ++ +LGRA +E I K D V G+LLSAC +H + +GE +A+ + +
Sbjct: 590 ALMVGLLGRACLFTEALYLIWKMDIKPDSAVWGALLSACIIHRELEVGEYVARKMFMLDY 649
Query: 501 VTTSPYVLLSNLYASDGMWNEVTSARKMLKGSG 533
YVL+SNLYA++ MW++V R M+K +G
Sbjct: 650 KNGGLYVLMSNLYATEAMWDDVVRVRNMMKDNG 682
Score = 153 bits (387), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/440 (25%), Positives = 199/440 (45%), Gaps = 22/440 (5%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG---EHWM 83
K GL V+V LLN+Y+K G V A+ +FD M ER+TV W+A+I GY + G + W
Sbjct: 78 KSGLDRFVYVKTSLLNLYLKKGCVTSAQMLFDEMPERDTVVWNALICGYSRNGYECDAWK 137
Query: 84 ALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYM 143
+ Q P+ + L C + QG+ +HG++ +SG S V N+LI+ Y
Sbjct: 138 LFIVMLQQGFSPSATTLVNLLPFCGQCGFVSQGRSVHGVAAKSGLELDSQVKNALISFYS 197
Query: 144 KCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVG 203
KC + A ++ ++VS+N +I + ++ E+ VFK M ++ + +
Sbjct: 198 KCAELGSAEVLFREMKDKSTVSWNTMIGAYSQSGLQEEAITVFKNMFEKNVEISPVTIIN 257
Query: 204 LLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKD 263
LL + + LHC VK + + ++ Y++ + R++ +
Sbjct: 258 LLSAHVSHE------PLHCLVVKCGMVNDISVVTSLVCAYSRCGCLVSAERLYASAKQDS 311
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
++ ++++ ++ D + ++F + C ++ D IL C + G +H
Sbjct: 312 IVGLTSIVSCYAEKGDMDIAVVYFSKTRQLC-MKIDAVALVGILHGCKKSSHIDIGMSLH 370
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
+ ++ V N L+ MY+K + +F ++ LISWN++I+ G
Sbjct: 371 GYAIKSGLCTKTLVVNGLITMYSKFDDVETVLFLFEQLQETPLISWNSVISGCVQSGRAS 430
Query: 384 RAIEIFEQMK-AEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIAPNI--GH 439
A E+F QM G+ PD++T LL C+ + G +L+ Y + N +
Sbjct: 431 TAFEVFHQMMLTGGLLPDAITIASLLAGCSQLCCLNLGKELH------GYTLRNNFENEN 484
Query: 440 FSC--LIDMLGRAGRLSEVE 457
F C LIDM + G + E
Sbjct: 485 FVCTALIDMYAKCGNEVQAE 504
Score = 125 bits (315), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 181/393 (46%), Gaps = 15/393 (3%)
Query: 95 PNEFVFASTLSACA-SLRAL-VQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDAL 152
PN F + L A S + +Q +Q+ +SG +V SL+ +Y+K G + A
Sbjct: 46 PNHFTMSIFLQATTTSFNSFKLQVEQVQTHLTKSGLDRFVYVKTSLLNLYLKKGCVTSAQ 105
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
++ ++V +NALI G+ N +++F +MLQ+GF P + V LL F
Sbjct: 106 MLFDEMPERDTVVWNALICGYSRNGYECDAWKLFIVMLQQGFSPSATTLVNLLPFCGQCG 165
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
G S+H A K L+ + N ++S Y++ + +FR ++DK +SWNT+I
Sbjct: 166 FVSQGRSVHGVAAKSGLELDSQVKNALISFYSKCAELGSAEVLFREMKDKSTVSWNTMIG 225
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
A+S Q ++ FK M E ++ T ++L++ H + +H + +
Sbjct: 226 AYSQSGLQEEAITVFKNMF-EKNVEISPVTIINLLSAHVSH------EPLHCLVVKCGMV 278
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
D+ V +LV Y++CG + A ++++ +++ ++++ + G + A+ F +
Sbjct: 279 NDISVVTSLVCAYSRCGCLVSAERLYASAKQDSIVGLTSIVSCYAEKGDMDIAVVYFSKT 338
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
+ +K D+V G+L C S + G + + G+ + LI M +
Sbjct: 339 RQLCMKIDAVALVGILHGCKKSSHIDIG-MSLHGYAIKSGLCTKTLVVNGLITMY---SK 394
Query: 453 LSEVEEYINKFHHLNDPVVLG--SLLSACRVHG 483
+VE + F L + ++ S++S C G
Sbjct: 395 FDDVETVLFLFEQLQETPLISWNSVISGCVQSG 427
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 55/110 (50%), Gaps = 7/110 (6%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI +LL CS+ L H L+ ++ FV L++MY KCG V A VF +
Sbjct: 451 TIASLLAGCSQLCCLNLGKELHGYTLRNNFENENFVCTALIDMYAKCGNEVQAESVFKSI 510
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSAC 107
T +W++MISGY G AL + +M+ + P+E F LSAC
Sbjct: 511 KAPCTATWNSMISGYSLSGLQHRALSCYLEMREKGLKPDEITFLGVLSAC 560
>AT3G63370.1 | Symbols: OTP86 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:23402080-23405180 FORWARD
LENGTH=884
Length = 884
Score = 282 bits (721), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 162/528 (30%), Positives = 280/528 (53%), Gaps = 6/528 (1%)
Query: 21 LHAAVLKIGLQS-HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+HA+VLK S ++V N L+ MY +CG++ A ++ M+ + V+W+++I GY Q
Sbjct: 306 IHASVLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365
Query: 80 EHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+ AL FS M +E S ++A L L+ G ++H ++ G+ S V N
Sbjct: 366 MYKEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGN 425
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+LI MY KC + + +S+ +I+G+ +N + E+F+ + ++
Sbjct: 426 TLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEI 485
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D +L S+ L +HC ++ L T +I N ++ +Y + + RVF
Sbjct: 486 DEMILGSILRASSVLKSMLIVKEIHCHILRKGLLDT-VIQNELVDVYGKCRNMGYATRVF 544
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
I+ KDV+SW ++I++ + ++ ++ F+ M+ E + D IL++ ++
Sbjct: 545 ESIKGKDVVSWTSMISSSALNGNESEAVELFRRMV-ETGLSADSVALLCILSAAASLSAL 603
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
G++IH +L R + + A+V+MYA CG + A VF ++ + L+ + +MI A+
Sbjct: 604 NKGREIHCYLLRKGFCLEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAY 663
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
G HG G+ A+E+F++M+ E V PD ++F LL AC+H+G++ +G + ME Y + P
Sbjct: 664 GMHGCGKAAVELFDKMRHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPW 723
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
H+ CL+DMLGRA + E E++ V +LL+ACR H IGE A+ LL
Sbjct: 724 PEHYVCLVDMLGRANCVVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLL 783
Query: 497 EVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
E+ P VL+SN++A G WN+V R +K SG+ K PG +W++
Sbjct: 784 ELEPKNPGNLVLVSNVFAEQGRWNDVEKVRAKMKASGMEKHPGCSWIE 831
Score = 180 bits (457), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 125/463 (26%), Positives = 229/463 (49%), Gaps = 29/463 (6%)
Query: 3 LETIGTLLQRCSKTMTFG----LHAAVLKIGLQSHV-FVSNQLLNMYVKCGRVVLARKVF 57
+E +L+ C K LH+ + K + F++ +L+ MY KCG + A KVF
Sbjct: 80 VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVF 139
Query: 58 DGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKV--LPNEF-VFASTLSACASLRALV 114
D M +R +W+ MI Y GE AL L+ M+V +P F + L ACA LR +
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISGF 173
G ++H L ++ GY S F+ N+L++MY K S A ++ ++V +N+++S +
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSY 259
Query: 174 VENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP 233
+ + + E+F+ M G P+ ++ V L + G +H +K + +
Sbjct: 260 STSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSE 319
Query: 234 L-IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
L + N +++MY + + + R+ R + + DV++WN+LI + ++ FF +M+
Sbjct: 320 LYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMI- 378
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD--VGVHNALVNMYAKCGS 350
+ D+ + SI+A+ ++ L G ++HA++ + WD + V N L++MY+KC
Sbjct: 379 AAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVI--KHGWDSNLQVGNTLIDMYSKCNL 436
Query: 351 IGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
Y + F +M ++LISW T+IA + + A+E+F + + ++ D + +L A
Sbjct: 437 TCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRA 496
Query: 411 CN-----------HSGMVRKGDL---YFNSMEAAYGIAPNIGH 439
+ H ++RKG L N + YG N+G+
Sbjct: 497 SSVLKSMLIVKEIHCHILRKGLLDTVIQNELVDVYGKCRNMGY 539
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 178/353 (50%), Gaps = 5/353 (1%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYA-SISFVSNSLITMYMKCGQCSDALSVYANS 158
FA L C RA+ QG+Q+H ++ + + F++ L+ MY KCG DA V+
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFDEM 142
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
+ ++N +I +V N EP ++ M EG SF LL L D R+G
Sbjct: 143 PDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGS 202
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK-DVISWNTLINAFSHF 277
LH VKL T I N ++SMYA+ + + R+F Q+K D + WN++++++S
Sbjct: 203 ELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTS 262
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY-WDVG 336
++ F+E M+ P+ +T S L +C + GK+IHA + ++ + ++
Sbjct: 263 GKSLETLELFRE-MHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELY 321
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
V NAL+ MY +CG + A ++ +M+ ++++WN++I + + + + A+E F M A G
Sbjct: 322 VCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAG 381
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGR 449
K D V+ T ++ A + G + ++ +G N+ + LIDM +
Sbjct: 382 HKSDEVSMTSIIAASGRLSNLLAG-MELHAYVIKHGWDSNLQVGNTLIDMYSK 433
>AT5G04780.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1384540-1386447 FORWARD
LENGTH=635
Length = 635
Score = 281 bits (719), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 159/511 (31%), Positives = 272/511 (53%), Gaps = 28/511 (5%)
Query: 41 LNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLP----N 96
+N ++C VL R+ NT S S IS L + Q +V P N
Sbjct: 16 VNFLIRCK--VLPRR-------SNTSSLSRNIS----------VLASYDQEEVSPGRYSN 56
Query: 97 EF----VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDAL 152
EF + L CA A+++ + HG +R + N LI Y KCG A
Sbjct: 57 EFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELAR 116
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
V+ + + VS+N +I + N + ++F M EGF F+ +L
Sbjct: 117 QVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNC 176
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
D LHC +VK +D +G ++ +YA+ I++ V+VF +QDK ++W++++
Sbjct: 177 DALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVA 236
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
+ + ++ L ++ S+ + FT +S++ +C+ A+ + GKQ+HA + ++
Sbjct: 237 GYVQNKNYEEALLLYRRA-QRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFG 295
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
+V V ++ V+MYAKCGS+ ++ +FS++ +NL WNT+I+ F H + + +FE+M
Sbjct: 296 SNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKM 355
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
+ +G+ P+ VTF+ LL C H+G+V +G +F M YG++PN+ H+SC++D+LGRAG
Sbjct: 356 QQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGL 415
Query: 453 LSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNL 512
LSE E I + GSLL++CRV+ N+ + E A+ L E+ P +VLLSN+
Sbjct: 416 LSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNI 475
Query: 513 YASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
YA++ W E+ +RK+L+ ++K G +W+
Sbjct: 476 YAANKQWEEIAKSRKLLRDCDVKKVRGKSWI 506
Score = 157 bits (398), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 204/402 (50%), Gaps = 13/402 (3%)
Query: 6 IGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
+ +LQ C++ H +++I L+ V + N L+N Y KCG V LAR+VFDGM
Sbjct: 64 VHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML 123
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQ 118
ER+ VSW+ MI Y + AL +F +M+ +EF +S LSAC ++ ++
Sbjct: 124 ERSLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK 183
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
+H LS+++ +V +L+ +Y KCG DA+ V+ + +SV+++++++G+V+N
Sbjct: 184 LHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
E+ +++ + ++F+ ++ +NL G +H K + +
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
+ MYA+ + E +F +Q+K++ WNT+I+ F+ + + F++M + + P
Sbjct: 304 AVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQD-GMHP 362
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH-NALVNMYAKCGSIGYAHKV 357
++ TF+S+L+ C G++ + T VH + +V++ + G + A+++
Sbjct: 363 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 422
Query: 358 FSKMSYRNLIS-WNTMIAA---FGNHGLGERAIEIFEQMKAE 395
+ + S W +++A+ + N L E A E +++ E
Sbjct: 423 IKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPE 464
>AT4G39952.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:18527680-18530007 FORWARD
LENGTH=775
Length = 775
Score = 281 bits (718), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/525 (30%), Positives = 276/525 (52%), Gaps = 7/525 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH +K GL S FV + + + Y K G A F + + + SW+++I+ + G+
Sbjct: 252 LHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGD 311
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ +F +M+ + P+ V + ++ + + QG+ HG +R ++ S V NS
Sbjct: 312 MEESFDMFWEMQNKGMHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNS 371
Query: 138 LITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
L++MY K S A ++ S N ++N ++ G+ + K E+F+ + G
Sbjct: 372 LLSMYCKFELLSVAEKLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQNLGIEI 431
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D S ++ +++ G SLHC VK +LD T + N ++ +Y + + R+F
Sbjct: 432 DSASATSVISSCSHIGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMF 491
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
D +VI+WN +I ++ H + K+ F M++E + +P T ++L +C S
Sbjct: 492 -CEADTNVITWNAMIASYVHCEQSEKAIALFDRMVSE-NFKPSSITLVTLLMACVNTGSL 549
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
G+ IH ++ T ++ + AL++MYAKCG + + ++F + ++ + WN MI+ +
Sbjct: 550 ERGQMIHRYITETEHEMNLSLSAALIDMYAKCGHLEKSRELFDAGNQKDAVCWNVMISGY 609
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
G HG E AI +F+QM+ VKP TF LL AC H+G+V +G F M Y + PN
Sbjct: 610 GMHGDVESAIALFDQMEESDVKPTGPTFLALLSACTHAGLVEQGKKLFLKMH-QYDVKPN 668
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLL 496
+ H+SCL+D+L R+G L E E + D V+ G+LLS+C HG +G R+A+ +
Sbjct: 669 LKHYSCLVDLLSRSGNLEEAESTVMSMPFSPDGVIWGTLLSSCMTHGEFEMGIRMAERAV 728
Query: 497 EVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
P Y++L+N+Y++ G W E AR+M++ SG+ K G++
Sbjct: 729 ASDPQNDGYYIMLANMYSAAGKWEEAERAREMMRESGVGKRAGHS 773
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 134/499 (26%), Positives = 241/499 (48%), Gaps = 18/499 (3%)
Query: 21 LHAAVLKIG-LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+H VLK G + V + Y KCG + A VFD M +R+ V+W+A+ISG+ Q G
Sbjct: 147 VHGLVLKHGGFDRNTAVGASFVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNG 206
Query: 80 EHWMALHLFSQMKVL------PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
E L +M PN AC++L AL +G+ +HG ++++G AS F
Sbjct: 207 ESEGGLGYLCKMHSAGSDVDKPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKF 266
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
V +S+ + Y K G S+A + + S+ ++I+ + + E+ F++F M +G
Sbjct: 267 VQSSMFSFYSKSGNPSEAYLSFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNKG 326
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
PD L+ + G + H ++ + N ++SMY +F +
Sbjct: 327 MHPDGVVISCLINELGKMMLVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAE 386
Query: 254 RVF-RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
++F R+ ++ + +WNT++ + K F+++ N I D + S+++SC+
Sbjct: 387 KLFCRISEEGNKEAWNTMLKGYGKMKCHVKCIELFRKIQN-LGIEIDSASATSVISSCSH 445
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTM 372
+ L GK +H ++ +T + V N+L+++Y K G + A ++F + N+I+WN M
Sbjct: 446 IGAVLLGKSLHCYVVKTSLDLTISVVNSLIDLYGKMGDLTVAWRMFCEAD-TNVITWNAM 504
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDL---YFNSMEA 429
IA++ + E+AI +F++M +E KP S+T LL+AC ++G + +G + Y E
Sbjct: 505 IASYVHCEQSEKAIALFDRMVSENFKPSSITLVTLLMACVNTGSLERGQMIHRYITETEH 564
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
N+ + LIDM + G L + E + + D V ++S +HG++
Sbjct: 565 EM----NLSLSAALIDMYAKCGHLEKSRELFDAGNQ-KDAVCWNVMISGYGMHGDVESAI 619
Query: 490 RLAKLLLEVPPVTTSPYVL 508
L + E T P L
Sbjct: 620 ALFDQMEESDVKPTGPTFL 638
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 125/442 (28%), Positives = 219/442 (49%), Gaps = 12/442 (2%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
+A ++ GL ++FV+++L++ Y G+ L+ +VF ++ R+ W+++I + G++
Sbjct: 47 NALIITGGLSENIFVASKLISSYASYGKPNLSSRVFHLVTRRDIFLWNSIIKAHFSNGDY 106
Query: 82 WMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLR-SGYASISFVSNS 137
+L F M + P+ F +SACA L G +HGL L+ G+ + V S
Sbjct: 107 ARSLCFFFSMLLSGQSPDHFTAPMVVSACAELLWFHVGTFVHGLVLKHGGFDRNTAVGAS 166
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
+ Y KCG DA V+ + V++ A+ISG V+N E E G M G D
Sbjct: 167 FVYFYSKCGFLQDACLVFDEMPDRDVVAWTAIISGHVQNGESEGGLGYLCKMHSAGSDVD 226
Query: 198 RFSFVGL-LGFS--TNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
+ + L GF +NL + G LH AVK L + + + + S Y++ E
Sbjct: 227 KPNPRTLECGFQACSNLGALKEGRCLHGFAVKNGLASSKFVQSSMFSFYSKSGNPSEAYL 286
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
FR + D+D+ SW ++I + + D +SF F EM N+ + PD + ++
Sbjct: 287 SFRELGDEDMFSWTSIIASLARSGDMEESFDMFWEMQNK-GMHPDGVVISCLINELGKMM 345
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMI 373
GK H F+ R D V N+L++MY K + A K+F ++S N +WNTM+
Sbjct: 346 LVPQGKAFHGFVIRHCFSLDSTVCNSLLSMYCKFELLSVAEKLFCRISEEGNKEAWNTML 405
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYG 432
+G + IE+F +++ G++ DS + T ++ +C+H G V G L+ ++ +
Sbjct: 406 KGYGKMKCHVKCIELFRKIQNLGIEIDSASATSVISSCSHIGAVLLGKSLHCYVVKTSLD 465
Query: 433 IAPNIGHFSCLIDMLGRAGRLS 454
+ ++ + LID+ G+ G L+
Sbjct: 466 LTISV--VNSLIDLYGKMGDLT 485
>AT4G02750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:1221116-1223461 REVERSE
LENGTH=781
Length = 781
Score = 280 bits (717), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/535 (31%), Positives = 277/535 (51%), Gaps = 24/535 (4%)
Query: 15 KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISG 74
+ G + +I + V N +L+ Y + G V AR VFD M E+N VSW+A++S
Sbjct: 138 RNRNLGKARELFEIMPERDVCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSA 197
Query: 75 YDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQI-HGLSLRSGYASISF 133
Y Q + A LF + + L + +V+ +Q +++R +S+
Sbjct: 198 YVQNSKMEEACMLFKSRENWA-LVSWNCLLGGFVKKKKIVEARQFFDSMNVRD---VVSW 253
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
N++IT Y + G+ +A ++ S + ++ A++SG+++N E+ E+F M
Sbjct: 254 --NTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVEEARELFDKM---- 307
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG----NVIMSMYAQFNFI 249
P+R + ++ L + G + + K D P N +++ YAQ I
Sbjct: 308 --PERNE----VSWNAMLAGYVQGERM--EMAKELFDVMPCRNVSTWNTMITGYAQCGKI 359
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
E +F + +D +SW +I +S ++ F +M E R + +F+S L++
Sbjct: 360 SEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGG-RLNRSSFSSALST 418
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
C + GKQ+H L + V NAL+ MY KCGSI A+ +F +M+ ++++SW
Sbjct: 419 CADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSW 478
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
NTMIA + HG GE A+ FE MK EG+KPD T +L AC+H+G+V KG YF +M
Sbjct: 479 NTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQ 538
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
YG+ PN H++C++D+LGRAG L + + D + G+LL A RVHGN + E
Sbjct: 539 DYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAE 598
Query: 490 RLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
A + + P + YVLLSNLYAS G W +V R ++ G++K PGY+W++
Sbjct: 599 TAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIE 653
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 101/405 (24%), Positives = 189/405 (46%), Gaps = 28/405 (6%)
Query: 10 LQRCSKT-MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSW 68
L+R ++T + +LK G S + N ++ Y++ GR A +VF M ++VS+
Sbjct: 40 LKRATQTQIQKSQTKPLLKCG-DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSY 98
Query: 69 SAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
+ MISGY + GE +A LF +M P + + + +R G+ +
Sbjct: 99 NGMISGYLRNGEFELARKLFDEM---PERDLVSWNVMIKGYVRNRNLGKARELFEIMPER 155
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
S+ N++++ Y + G DA SV+ N VS+NAL+S +V+N + E+ +FK
Sbjct: 156 DVCSW--NTMLSGYAQNGCVDDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKS 213
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
V G + ++ + S++ + V + N I++ YAQ
Sbjct: 214 RENWALVSWNCLLGGFVKKKKIVEARQFFDSMNVRDV--------VSWNTIITGYAQSGK 265
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
I+E ++F +DV +W +++ + Q + +E+ ++ R ++ ++ ++L
Sbjct: 266 IDEARQLFDESPVQDVFTWTAMVSGYI----QNRMVEEARELFDKMPER-NEVSWNAML- 319
Query: 309 SCTWHASFLHGKQIH--AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL 366
A ++ G+++ LF +V N ++ YA+CG I A +F KM R+
Sbjct: 320 -----AGYVQGERMEMAKELFDVMPCRNVSTWNTMITGYAQCGKISEAKNLFDKMPKRDP 374
Query: 367 ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
+SW MIA + G A+ +F QM+ EG + + +F+ L C
Sbjct: 375 VSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTC 419
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/343 (21%), Positives = 154/343 (44%), Gaps = 27/343 (7%)
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
N I+ YM+ G+C++AL V+ +SVSYN +ISG++ N E E ++F M + V
Sbjct: 68 NVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYLRNGEFELARKLFDEMPERDLV 127
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
G + + NL R + ++ + N ++S YAQ +++ V
Sbjct: 128 SWNVMIKGYVR-NRNLGKAR-------ELFEIMPERDVCSWNTMLSGYAQNGCVDDARSV 179
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + +K+ +SWN L++A+ ++ + FK N + ++ +L
Sbjct: 180 FDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALV-----SWNCLLGGFVKKKK 234
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
+ +Q F + DV N ++ YA+ G I A ++F + +++ +W M++
Sbjct: 235 IVEARQ----FFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSG 290
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ + + E A E+F++M + + V++ +L + F+ M
Sbjct: 291 YIQNRMVEEARELFDKMP----ERNEVSWNAMLAGYVQGERMEMAKELFDVMPCR----- 341
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
N+ ++ +I + G++SE + +K DPV ++++
Sbjct: 342 NVSTWNTMITGYAQCGKISEAKNLFDKMPK-RDPVSWAAMIAG 383
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/277 (19%), Positives = 118/277 (42%), Gaps = 25/277 (9%)
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGK 320
D D+ WN I+++ ++ FK M S+ ++ +++ + F
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSV-----SYNGMISGYLRNGEF---- 111
Query: 321 QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHG 380
++ LF D+ N ++ Y + ++G A ++F M R++ SWNTM++ + +G
Sbjct: 112 ELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMPERDVCSWNTMLSGYAQNG 171
Query: 381 LGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHF 440
+ A +F++M + + V++ LL A + + + + F S E ++ N
Sbjct: 172 CVDDARSVFDRMP----EKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWN---- 223
Query: 441 SCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPP 500
CL+ + ++ E ++ + ++ D V ++++ G + + +L E P
Sbjct: 224 -CLLGGFVKKKKIVEARQFFDSM-NVRDVVSWNTIITGYAQSGKI---DEARQLFDESPV 278
Query: 501 VTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
+ + + Y + M V AR++ R E
Sbjct: 279 QDVFTWTAMVSGYIQNRM---VEEARELFDKMPERNE 312
>AT3G24000.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8672774-8674881 FORWARD
LENGTH=665
Length = 665
Score = 279 bits (713), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 138/452 (30%), Positives = 250/452 (55%), Gaps = 3/452 (0%)
Query: 94 LPNEFVFASTL-SACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDAL 152
+P + F +TL C + L+QG+ +H L+S + + N+L+ MY KCG +A
Sbjct: 56 IPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEAR 115
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
V+ + V++ LISG+ ++ P F ML+ G+ P+ F+ ++ +
Sbjct: 116 KVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAER 175
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
G LH VK D +G+ ++ +Y ++ +++ VF ++ ++ +SWN LI
Sbjct: 176 RGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA 235
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
+ K+ F+ M+ + RP F++AS+ +C+ GK +HA++ ++ +
Sbjct: 236 GHARRSGTEKALELFQGMLRD-GFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEK 294
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
N L++MYAK GSI A K+F +++ R+++SWN+++ A+ HG G+ A+ FE+M
Sbjct: 295 LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM 354
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
+ G++P+ ++F +L AC+HSG++ +G Y+ M+ GI P H+ ++D+LGRAG
Sbjct: 355 RRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD-GIVPEAWHYVTVVDLLGRAGD 413
Query: 453 LSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNL 512
L+ +I + + +LL+ACR+H N +G A+ + E+ P P+V+L N+
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNI 473
Query: 513 YASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
YAS G WN+ RK +K SG++KEP +W++
Sbjct: 474 YASGGRWNDAARVRKKMKESGVKKEPACSWVE 505
Score = 195 bits (496), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 222/459 (48%), Gaps = 50/459 (10%)
Query: 8 TLLQRCS--KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER 63
TLL++C+ K + G +HA +L+ + + + N LLNMY KCG + ARKVF+ M +R
Sbjct: 65 TLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMPQR 124
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIH 120
+ V+W+ +ISGY Q AL F+QM PNEF +S + A A+ R G Q+H
Sbjct: 125 DFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLH 184
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
G ++ G+ S V ++L+ +Y + G DA V+ N VS+NALI+G E
Sbjct: 185 GFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
K E+F+ ML++GF P FS+ L G ++ G +H +K GN ++
Sbjct: 245 KALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLL 304
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
MYA+ I + ++F + +DV+SWN+L+ A++ GK +++ E M IRP++
Sbjct: 305 DMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQH-GFGKEAVWWFEEMRRVGIRPNE 363
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+F S+L +C+ H+ L D G H + K G + A
Sbjct: 364 ISFLSVLTACS-HSGLL----------------DEGWH--YYELMKKDGIVPEA------ 398
Query: 361 MSYRNLISWN--TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
W+ T++ G G RA+ E+M ++P + + LL AC M +
Sbjct: 399 --------WHYVTVVDLLGRAGDLNRALRFIEEMP---IEPTAAIWKALLNACR---MHK 444
Query: 419 KGDLYFNSMEAAYGIAP-NIGHFSCLIDMLGRAGRLSEV 456
+L + E + + P + G L ++ GR ++
Sbjct: 445 NTELGAYAAEHVFELDPDDPGPHVILYNIYASGGRWNDA 483
>AT3G49142.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:18215788-18217848 REVERSE
LENGTH=686
Length = 686
Score = 278 bits (712), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 162/524 (30%), Positives = 261/524 (49%), Gaps = 41/524 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H+ ++ L+ + + +L+ Y V ARKVFD + ERN + + MI Y G
Sbjct: 61 VHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGF 120
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ + +F M V P+ + F L AC+ +V G++IHG + + G +S FV N
Sbjct: 121 YGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNG 180
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L++MY KCG S+A V + VS+N+L+ G+ +N + EV + M D
Sbjct: 181 LVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHD 240
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS--MYAQFNFIEEVVRV 255
+ LL P + N MY + F +
Sbjct: 241 AGTMASLL---------------------------PAVSNTTTENVMYVKDMFFK----- 268
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
+ K ++SWN +I + ++ + M + PD + S+L +C ++
Sbjct: 269 ---MGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD-GFEPDAVSITSVLPACGDTSA 324
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
GK+IH ++ R + ++ + NAL++MYAKCG + A VF M R+++SW MI+A
Sbjct: 325 LSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENMKSRDVVSWTAMISA 384
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+G G G A+ +F +++ G+ PDS+ F L AC+H+G++ +G F M Y I P
Sbjct: 385 YGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITP 444
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
+ H +C++D+LGRAG++ E +I + V G+LL ACRVH + IG A L
Sbjct: 445 RLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRVHSDTDIGLLAADKL 504
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
++ P + YVLLSN+YA G W EVT+ R ++K GL+K PG
Sbjct: 505 FQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPG 548
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 17/298 (5%)
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
D RT ++H + + L C +G +M YA + +VF I +++VI N +I
Sbjct: 54 DIRTLRTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIR 113
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
++ + G+ F M C++RPD +TF +L +C+ + + G++IH +
Sbjct: 114 SYVNNGFYGEGVKVFGTMCG-CNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLS 172
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
+ V N LV+MY KCG + A V +MS R+++SWN+++ + + + A+E+ +M
Sbjct: 173 STLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREM 232
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
++ + D+ T LL A S + +Y M G ++ ++ +I + +
Sbjct: 233 ESVKISHDAGTMASLLPAV--SNTTTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAM 289
Query: 453 LSEVEEYINKFHHLN---DPVVLGSLLSAC----------RVHGNMAIGERLAKLLLE 497
E E ++ D V + S+L AC ++HG + + + LLLE
Sbjct: 290 PVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLE 347
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 7/120 (5%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
+I ++L C T L H + + L ++ + N L++MY KCG + AR VF+ M
Sbjct: 311 SITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKARDVFENM 370
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQ 117
R+ VSW+AMIS Y G A+ LFS+++ ++P+ F +TL+AC+ L +G+
Sbjct: 371 KSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGR 430
>AT2G02750.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:771641-773482 REVERSE
LENGTH=613
Length = 613
Score = 278 bits (710), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 183/583 (31%), Positives = 294/583 (50%), Gaps = 51/583 (8%)
Query: 5 TIGTLLQRCSK--TMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T LL+ C+K + G LHA V+K G VF + L++MY+K +V A KV D M
Sbjct: 33 TFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKVLDEM 92
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLP---NEFVFASTLSACASLRALVQGQ 117
ER S +A +SG + G A +F +V N AS L C + G
Sbjct: 93 PERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLGGCGDIEG---GM 149
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
Q+H L+++SG+ +V SL++MY +CG+ A ++ + V+YNA ISG +EN
Sbjct: 150 QLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGLMENG 209
Query: 178 EPEKGFEVFKLMLQ-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
VF LM + P+ +FV + +L + + G LH +K ++G
Sbjct: 210 VMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFETMVG 269
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQD-KDVISWNTLINA-------------FSHFDDQG- 281
++ MY++ + VF ++D +++ISWN++I+ F D +G
Sbjct: 270 TALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLDSEGL 329
Query: 282 ---------------------KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGK 320
++F FF+ M++ + P S+L++C+ + +GK
Sbjct: 330 KPDSATWNSLISGFSQLGKVIEAFKFFERMLSVVMV-PSLKCLTSLLSACSDIWTLKNGK 388
Query: 321 QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS--YRNLISWNTMIAAFGN 378
+IH + + D+ V +L++MY KCG +A ++F + ++ + WN MI+ +G
Sbjct: 389 EIHGHVIKAAAERDIFVLTSLIDMYMKCGLSSWARRIFDRFEPKPKDPVFWNVMISGYGK 448
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIG 438
HG E AIEIFE ++ E V+P TFT +L AC+H G V KG F M+ YG P+
Sbjct: 449 HGECESAIEIFELLREEKVEPSLATFTAVLSACSHCGNVEKGSQIFRLMQEEYGYKPSTE 508
Query: 439 HFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEV 498
H C+ID+LGR+GRL E +E I++ + V SLL +CR H + +GE A L E+
Sbjct: 509 HIGCMIDLLGRSGRLREAKEVIDQMSEPSS-SVYSSLLGSCRQHLDPVLGEEAAMKLAEL 567
Query: 499 PPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
P +P+V+LS++YA+ W +V S R+++ L K PG +
Sbjct: 568 EPENPAPFVILSSIYAALERWEDVESIRQVIDQKQLVKLPGLS 610
Score = 170 bits (431), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 189/389 (48%), Gaps = 14/389 (3%)
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
PN+F F L +CA L +VQG+ +H +++G+ F + +L++MYMK Q +DAL V
Sbjct: 29 PNKFTFPPLLKSCAKLGDVVQGRILHAQVVKTGFFVDVFTATALVSMYMKVKQVTDALKV 88
Query: 155 YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF 214
S NA +SG +EN F +F G + + +LG D
Sbjct: 89 LDEMPERGIASVNAAVSGLLENGFCRDAFRMFGDARVSGSGMNSVTVASVLG---GCGDI 145
Query: 215 RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
GM LHC A+K + +G ++SMY++ R+F + K V+++N I+
Sbjct: 146 EGGMQLHCLAMKSGFEMEVYVGTSLVSMYSRCGEWVLAARMFEKVPHKSVVTYNAFISGL 205
Query: 275 SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD 334
F M S P+D TF + + +C + +G+Q+H + + ++
Sbjct: 206 MENGVMNLVPSVFNLMRKFSSEEPNDVTFVNAITACASLLNLQYGRQLHGLVMKKEFQFE 265
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKM-SYRNLISWNTMIAAFGNHGLGERAIEIFEQMK 393
V AL++MY+KC A+ VF+++ RNLISWN++I+ +G E A+E+FE++
Sbjct: 266 TMVGTALIDMYSKCRCWKSAYIVFTELKDTRNLISWNSVISGMMINGQHETAVELFEKLD 325
Query: 394 AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
+EG+KPDS T+ L+ + G V + +F M + + P++ CL +L +
Sbjct: 326 SEGLKPDSATWNSLISGFSQLGKVIEAFKFFERMLSVV-MVPSL---KCLTSLLSACSDI 381
Query: 454 ------SEVEEYINKFHHLNDPVVLGSLL 476
E+ ++ K D VL SL+
Sbjct: 382 WTLKNGKEIHGHVIKAAAERDIFVLTSLI 410
>AT1G53600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:20001263-20003416 FORWARD
LENGTH=717
Length = 717
Score = 278 bits (710), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 165/516 (31%), Positives = 274/516 (53%), Gaps = 46/516 (8%)
Query: 33 HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK 92
V + +++ Y K GR+V AR +FD M+ERN ++W+AMI GY + G LF +M+
Sbjct: 207 EVVSCSSMVHGYCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFEDGFGLFLRMR 266
Query: 93 ----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQC 148
V N A AC +G QIHGL R F+ NSL++MY K G
Sbjct: 267 QEGDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYM 326
Query: 149 SDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GF 207
+A +V+ +SVS+N+LI+G V+ + + +E+F+ M + D S+ ++ GF
Sbjct: 327 GEAKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGK----DMVSWTDMIKGF 382
Query: 208 STNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISW 267
S + I + V +F ++ +KD I+W
Sbjct: 383 SGKGE------------------------------------ISKCVELFGMMPEKDNITW 406
Query: 268 NTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF 327
+I+AF ++ +F +M+ + + P+ +TF+S+L++ A + G QIH +
Sbjct: 407 TAMISAFVSNGYYEEALCWFHKMLQK-EVCPNSYTFSSVLSATASLADLIEGLQIHGRVV 465
Query: 328 RTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIE 387
+ D+ V N+LV+MY KCG+ A+K+FS +S N++S+NTMI+ + +G G++A++
Sbjct: 466 KMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYSYNGFGKKALK 525
Query: 388 IFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDML 447
+F +++ G +P+ VTF LL AC H G V G YF SM+++Y I P H++C++D+L
Sbjct: 526 LFSMLESSGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLL 585
Query: 448 GRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYV 507
GR+G L + I+ V GSLLSA + H + + E AK L+E+ P + +PYV
Sbjct: 586 GRSGLLDDASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645
Query: 508 LLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
+LS LY+ G + + K ++K+PG +W+
Sbjct: 646 VLSQLYSIIGKNRDCDRIMNIKKSKRIKKDPGSSWI 681
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 129/575 (22%), Positives = 238/575 (41%), Gaps = 105/575 (18%)
Query: 12 RCSKTMTFGLHAAVLK--------IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER 63
RC+ T+ H + + + +F N ++ + + G + A +F MS R
Sbjct: 20 RCNSTLAVSNHEPITQKTRNFLETTTTSTAIFQCNSQISKHARNGNLQEAEAIFRQMSNR 79
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLS 123
+ VSW AMIS Y + G+ A +F +M V T S A + A+++ + G +
Sbjct: 80 SIVSWIAMISAYAENGKMSKAWQVFDEMPV-------RVTTSYNAMITAMIKNKCDLGKA 132
Query: 124 LR-----SGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT--NSVSYNALISGFVEN 176
++S+ + +IT +++ G+ +A +YA + +SV+ N L+SG++
Sbjct: 133 YELFCDIPEKNAVSYAT--MITGFVRAGRFDEAEFLYAETPVKFRDSVASNVLLSGYLRA 190
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
+ + VF+ M AVK + C+ ++
Sbjct: 191 GKWNEAVRVFQGM----------------------------------AVKEVVSCSSMVH 216
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF---SHFDDQGKSFLFFKEMMNE 293
Y + I + +F + +++VI+W +I+ + F+D F F M E
Sbjct: 217 G-----YCKMGRIVDARSLFDRMTERNVITWTAMIDGYFKAGFFED---GFGLFLRMRQE 268
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGY 353
++ + T A + +C + G QIH + R +D+ + N+L++MY+K G +G
Sbjct: 269 GDVKVNSNTLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGE 328
Query: 354 AHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE------------------ 395
A VF M ++ +SWN++I A E+FE+M +
Sbjct: 329 AKAVFGVMKNKDSVSWNSLITGLVQRKQISEAYELFEKMPGKDMVSWTDMIKGFSGKGEI 388
Query: 396 -------GVKP--DSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDM 446
G+ P D++T+T ++ A +G + +F+ M + PN FS ++
Sbjct: 389 SKCVELFGMMPEKDNITWTAMISAFVSNGYYEEALCWFHKM-LQKEVCPNSYTFSSVLSA 447
Query: 447 LGRAGRLSE---VEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTT 503
L E + + K + +ND V SL+S GN ++ + E P
Sbjct: 448 TASLADLIEGLQIHGRVVKMNIVNDLSVQNSLVSMYCKCGNTNDAYKIFSCISE--PNIV 505
Query: 504 SPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEP 538
S ++S Y+ +G + ML+ SG KEP
Sbjct: 506 SYNTMISG-YSYNGFGKKALKLFSMLESSG--KEP 537
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 147/310 (47%), Gaps = 41/310 (13%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ + + C + + +H V ++ L+ +F+ N L++MY K G + A+ VF M
Sbjct: 277 TLAVMFKACRDFVRYREGSQIHGLVSRMPLEFDLFLGNSLMSMYSKLGYMGEAKAVFGVM 336
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH 120
+++VSW+++I+G Q + A LF +M P + + + T I
Sbjct: 337 KNKDSVSWNSLITGLVQRKQISEAYELFEKM---PGKDMVSWT-------------DMIK 380
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
G S + G+ S + ++ +++++ A+IS FV N E
Sbjct: 381 GFSGK--------------------GEISKCVELFGMMPEKDNITWTAMISAFVSNGYYE 420
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ F MLQ+ P+ ++F +L + +L D G+ +H + VK+ + + N ++
Sbjct: 421 EALCWFHKMLQKEVCPNSYTFSSVLSATASLADLIEGLQIHGRVVKMNIVNDLSVQNSLV 480
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
SMY + + ++F I + +++S+NT+I+ +S ++ GK L M+ P+
Sbjct: 481 SMYCKCGNTNDAYKIFSCISEPNIVSYNTMISGYS-YNGFGKKALKLFSMLESSGKEPNG 539
Query: 301 FTFASILASC 310
TF ++L++C
Sbjct: 540 VTFLALLSAC 549
>AT2G17210.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:7485398-7487602 REVERSE
LENGTH=715
Length = 715
Score = 277 bits (709), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 164/536 (30%), Positives = 282/536 (52%), Gaps = 21/536 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V++ G V N +L MY + ARK+FD MSER+ +SWS +I Y Q E
Sbjct: 147 IHGYVIRSGFCGISSVQNSILCMYADSDSLS-ARKLFDEMSERDVISWSVVIRSYVQSKE 205
Query: 81 HWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA-SISFVS 135
+ L LF +M K P+ S L AC + + G+ +HG S+R G+ + FV
Sbjct: 206 PVVGLKLFKEMVHEAKTEPDCVTVTSVLKACTVMEDIDVGRSVHGFSIRRGFDLADVFVC 265
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
NSLI MY K A V+ + N VS+N++++GFV N ++ E+F LM+QE
Sbjct: 266 NSLIDMYSKGFDVDSAFRVFDETTCRNIVSWNSILAGFVHNQRYDEALEMFHLMVQEAVE 325
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
D + V LL + S+H ++ + + + ++ Y + +++ V
Sbjct: 326 VDEVTVVSLLRVCKFFEQPLPCKSIHGVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTV 385
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
+ KDV+S +T+I+ +H ++ F M + P+ T S+L +C+ A
Sbjct: 386 LDSMTYKDVVSCSTMISGLAHAGRSDEAISIFCHMRDT----PNAITVISLLNACSVSAD 441
Query: 316 FLHGKQIHAF-LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
K H + R+ D+ V ++V+ YAKCG+I A + F +++ +N+ISW +I+
Sbjct: 442 LRTSKWAHGIAIRRSLAINDISVGTSIVDAYAKCGAIEMARRTFDQITEKNIISWTVIIS 501
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
A+ +GL ++A+ +F++MK +G P++VT+ L ACNH G+V+KG + F SM
Sbjct: 502 AYAINGLPDKALALFDEMKQKGYTPNAVTYLAALSACNHGGLVKKGLMIFKSM-VEEDHK 560
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPV-----VLGSLLSACRVH-GNMAIG 488
P++ H+SC++DML RAG E++ + +L + V G++LS CR + I
Sbjct: 561 PSLQHYSCIVDMLSRAG---EIDTAVELIKNLPEDVKAGASAWGAILSGCRNRFKKLIIT 617
Query: 489 ERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ +LE+ P+ +S Y+L S+ +A++ W +V R+++K +R GY+ ++
Sbjct: 618 SEVVAEVLELEPLCSSGYLLASSTFAAEKSWEDVAMMRRLVKERKVRVVAGYSMVR 673
Score = 173 bits (439), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 201/395 (50%), Gaps = 18/395 (4%)
Query: 32 SHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM 91
S +F N + + Y+KCG + + FD M+ R++VSW+ ++ G G L FS++
Sbjct: 59 SWLFQGNSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFSKL 118
Query: 92 KVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQC 148
+V PN + AC SL G++IHG +RSG+ IS V NS++ MY
Sbjct: 119 RVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYAD---- 172
Query: 149 SDALS---VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGL 204
SD+LS ++ + +S++ +I +V++ EP G ++FK M+ E PD + +
Sbjct: 173 SDSLSARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSV 232
Query: 205 LGFSTNLDDFRTGMSLHCQAVKLALDCTPL-IGNVIMSMYAQFNFIEEVVRVFRLIQDKD 263
L T ++D G S+H +++ D + + N ++ MY++ ++ RVF ++
Sbjct: 233 LKACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRN 292
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
++SWN+++ F H ++ F M+ E ++ D+ T S+L C + L K IH
Sbjct: 293 IVSWNSILAGFVHNQRYDEALEMFHLMVQE-AVEVDEVTVVSLLRVCKFFEQPLPCKSIH 351
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
+ R + ++L++ Y C + A V M+Y++++S +TMI+ + G +
Sbjct: 352 GVIIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGRSD 411
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
AI IF M+ P+++T LL AC+ S +R
Sbjct: 412 EAISIFCHMRD---TPNAITVISLLNACSVSADLR 443
Score = 146 bits (369), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 201/452 (44%), Gaps = 68/452 (15%)
Query: 68 WSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSG 127
W ++SGY + + + + FVF ACA L L QG
Sbjct: 25 WREVVSGYSEIQRAGVQFN---------DPFVFPIVFKACAKLSWLFQG----------- 64
Query: 128 YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFK 187
NS+ YMKCG L + +SVS+N ++ G ++ E+G F
Sbjct: 65 --------NSIADFYMKCGDLCSGLREFDCMNSRDSVSWNVIVFGLLDYGFEEEGLWWFS 116
Query: 188 LMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN 247
+ GF P+ + V ++ +L + G +H ++ + N I+ MYA +
Sbjct: 117 KLRVWGFEPNTSTLVLVIHACRSL--WFDGEKIHGYVIRSGFCGISSVQNSILCMYADSD 174
Query: 248 FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL 307
+ ++F + ++DVISW+ +I ++ + FKEM++E PD T S+L
Sbjct: 175 SL-SARKLFDEMSERDVISWSVVIRSYVQSKEPVVGLKLFKEMVHEAKTEPDCVTVTSVL 233
Query: 308 ASCTWHASFLHGKQIHAF-LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL 366
+CT G+ +H F + R DV V N+L++MY+K + A +VF + + RN+
Sbjct: 234 KACTVMEDIDVGRSVHGFSIRRGFDLADVFVCNSLIDMYSKGFDVDSAFRVFDETTCRNI 293
Query: 367 ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN-----------HSG 415
+SWN+++A F ++ + A+E+F M E V+ D VT LL C H
Sbjct: 294 VSWNSILAGFVHNQRYDEALEMFHLMVQEAVEVDEVTVVSLLRVCKFFEQPLPCKSIHGV 353
Query: 416 MVRKG----DLYFNSMEAAYG---------------IAPNIGHFSCLIDMLGRAGRLSEV 456
++R+G ++ +S+ AY ++ S +I L AGR
Sbjct: 354 IIRRGYESNEVALSSLIDAYTSCSLVDDAGTVLDSMTYKDVVSCSTMISGLAHAGR---S 410
Query: 457 EEYINKFHHLND---PVVLGSLLSACRVHGNM 485
+E I+ F H+ D + + SLL+AC V ++
Sbjct: 411 DEAISIFCHMRDTPNAITVISLLNACSVSADL 442
>AT3G23330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8347200-8349347 FORWARD
LENGTH=715
Length = 715
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/570 (28%), Positives = 281/570 (49%), Gaps = 41/570 (7%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
SK+ LHA ++ SH S ++++Y + A +F + ++W ++I
Sbjct: 20 SKSQAKQLHAQFIRTQSLSHTSAS-IVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIR 78
Query: 74 GYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYAS 130
+ AL F +M+ P+ VF S L +C + L G+ +HG +R G
Sbjct: 79 CFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDC 138
Query: 131 ISFVSNSLITMYMK---------CGQCSDALSVYANSVG--------------------- 160
+ N+L+ MY K G D + ++ G
Sbjct: 139 DLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRV 198
Query: 161 ------TNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF 214
+ VSYN +I+G+ ++ E + + M PD F+ +L + D
Sbjct: 199 FEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDV 258
Query: 215 RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
G +H ++ +D IG+ ++ MYA+ IE+ RVF + +D ISWN+L+ +
Sbjct: 259 IKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSLVAGY 318
Query: 275 SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD 334
++ F++M+ ++P F+S++ +C A+ GKQ+H ++ R +
Sbjct: 319 VQNGRYNEALRLFRQMVT-AKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA 394
+ + +ALV+MY+KCG+I A K+F +M+ + +SW +I HG G A+ +FE+MK
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKR 437
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
+GVKP+ V F +L AC+H G+V + YFNSM YG+ + H++ + D+LGRAG+L
Sbjct: 438 QGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLE 497
Query: 455 EVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYA 514
E +I+K V +LLS+C VH N+ + E++A+ + V YVL+ N+YA
Sbjct: 498 EAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYA 557
Query: 515 SDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
S+G W E+ R ++ GLRK+P +W++
Sbjct: 558 SNGRWKEMAKLRLRMRKKGLRKKPACSWIE 587
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 197/420 (46%), Gaps = 50/420 (11%)
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSL-ITMYMKCGQCSDALSVYANSVGTNSVSYNA 168
+++ Q +Q+H +R+ S+S S S+ I++Y +AL ++ +++ +
Sbjct: 18 IKSKSQAKQLHAQFIRT--QSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKS 75
Query: 169 LISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA 228
+I F + K F M G PD F +L T + D R G S+H V+L
Sbjct: 76 VIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLG 135
Query: 229 LDCTPLIGNVIMSMYAQF----------NFIEE--------------------------V 252
+DC GN +M+MYA+ N +E V
Sbjct: 136 MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSV 195
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
RVF ++ KDV+S+NT+I ++ + +E M ++PD FT +S+L +
Sbjct: 196 RRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVRE-MGTTDLKPDSFTLSSVLPIFSE 254
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTM 372
+ + GK+IH ++ R DV + ++LV+MYAK I + +VFS++ R+ ISWN++
Sbjct: 255 YVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGISWNSL 314
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAY 431
+A + +G A+ +F QM VKP +V F+ ++ AC H + G L+ + +
Sbjct: 315 VAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGF 374
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND----PVVLGSLLSACRVHGNMAI 487
G NI S L+DM + G + + ++ + L++ +++G L HG+ A+
Sbjct: 375 G--SNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHG---HGHEAV 429
>AT2G39620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:16518968-16521478 REVERSE
LENGTH=836
Length = 836
Score = 276 bits (707), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 156/530 (29%), Positives = 279/530 (52%), Gaps = 18/530 (3%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
+H ++ GL V V+ L++MY KCG + +A ++F + +R+ VSWSAMI+ Y+Q
Sbjct: 320 IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQA 379
Query: 79 GEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
G+H A+ LF M + PN S L CA + A G+ IH ++++ S +
Sbjct: 380 GQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETA 439
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
++I+MY KCG+ S AL + ++V++NAL G+ + + K F+V+K M G
Sbjct: 440 TAVISMYAKCGRFSPALKAFERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVC 499
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD + VG+L D+ G ++ Q +K D + + +++M+ + + + + +
Sbjct: 500 PDSRTMVGMLQTCAFCSDYARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVL 559
Query: 256 F-RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
F + +K +SWN ++N + ++ F++M E +P+ TF +I+ + +
Sbjct: 560 FDKCGFEKSTVSWNIMMNGYLLHGQAEEAVATFRQMKVE-KFQPNAVTFVNIVRAAAELS 618
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
+ G +H+ L + V N+LV+MYAKCG I + K F ++S + ++SWNTM++
Sbjct: 619 ALRVGMSVHSSLIQCGFCSQTPVGNSLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLS 678
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
A+ HGL A+ +F M+ +KPDSV+F +L AC H+G+V +G F M + I
Sbjct: 679 AYAAHGLASCAVSLFLSMQENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIE 738
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
+ H++C++D+LG+AG E E + + V G+LL++ R+H N+ +
Sbjct: 739 AEVEHYACMVDLLGKAGLFGEAVEMMRRMRVKTSVGVWGALLNSSRMHCNLWLSNAALCQ 798
Query: 495 LLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
L+++ P+ S Y+ D EV + S ++K P +W++
Sbjct: 799 LVKLEPLNPSH-------YSQDRRLGEVNNV------SRIKKVPACSWIE 835
Score = 182 bits (462), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/453 (26%), Positives = 222/453 (49%), Gaps = 13/453 (2%)
Query: 10 LQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT 65
L+ C+ +M F +H + ++GL+S V++ L+ MY K +V AR+VFD M ++
Sbjct: 107 LKACAGSMDFKKGLRIHDLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDV 166
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGL 122
V+W+ M+SG Q G AL LF M+ V + + + A + L + +HGL
Sbjct: 167 VTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGL 226
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKG 182
++ G+ I S+ LI MY C A SV+ + S+ +++ + N E+
Sbjct: 227 VIKKGF--IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEV 284
Query: 183 FEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
E+F LM ++ + L + + D G+++H AV+ L + +MSM
Sbjct: 285 LELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVATSLMSM 344
Query: 243 YAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
Y++ +E ++F I+D+DV+SW+ +I ++ ++ F++MM I+P+ T
Sbjct: 345 YSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMM-RIHIKPNAVT 403
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
S+L C A+ GK IH + + ++ A+++MYAKCG A K F ++
Sbjct: 404 LTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAFERLP 463
Query: 363 YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH-SGMVRKGD 421
++ +++N + + G +A ++++ MK GV PDS T G+L C S R
Sbjct: 464 IKDAVAFNALAQGYTQIGDANKAFDVYKNMKLHGVCPDSRTMVGMLQTCAFCSDYARGSC 523
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
+Y ++ + ++ H LI+M + L+
Sbjct: 524 VYGQIIKHGFDSECHVAH--ALINMFTKCDALA 554
Score = 175 bits (444), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 138/552 (25%), Positives = 254/552 (46%), Gaps = 48/552 (8%)
Query: 21 LHAAVLKIGLQSHVFV-SNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
LH V+K G +F S+ L++MY C + A VF+ + ++ SW M++ Y G
Sbjct: 223 LHGLVIKKGF---IFAFSSGLIDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNG 279
Query: 80 EHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
L LF M+ V N+ AS L A A + LV+G IH +++ G V+
Sbjct: 280 FFEEVLELFDLMRNYDVRMNKVAAASALQAAAYVGDLVKGIAIHDYAVQQGLIGDVSVAT 339
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
SL++MY KCG+ A ++ N + VS++A+I+ + + + ++ +F+ M++ P
Sbjct: 340 SLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMIASYEQAGQHDEAISLFRDMMRIHIKP 399
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
+ + +L + R G S+HC A+K ++ ++SMYA+ ++ F
Sbjct: 400 NAVTLTSVLQGCAGVAASRLGKSIHCYAIKADIESELETATAVISMYAKCGRFSPALKAF 459
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
+ KD +++N L ++ D K+F +K M + PD T +L +C + + +
Sbjct: 460 ERLPIKDAVAFNALAQGYTQIGDANKAFDVYKNMKLH-GVCPDSRTMVGMLQTCAFCSDY 518
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSY-RNLISWNTMIAA 375
G ++ + + + V +AL+NM+ KC ++ A +F K + ++ +SWN M+
Sbjct: 519 ARGSCVYGQIIKHGFDSECHVAHALINMFTKCDALAAAIVLFDKCGFEKSTVSWNIMMNG 578
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIA 434
+ HG E A+ F QMK E +P++VTF ++ A +R G ++ + ++ +
Sbjct: 579 YLLHGQAEEAVATFRQMKVEKFQPNAVTFVNIVRAAAELSALRVGMSVHSSLIQCGFCSQ 638
Query: 435 PNIGHFSCLIDMLGRAGRLSEVE----EYINKF-------------HHLN---------- 467
+G+ L+DM + G + E E NK+ H L
Sbjct: 639 TPVGN--SLVDMYAKCGMIESSEKCFIEISNKYIVSWNTMLSAYAAHGLASCAVSLFLSM 696
Query: 468 -------DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSP--YVLLSNLYASDGM 518
D V S+LSACR G + G+R+ + + E + Y + +L G+
Sbjct: 697 QENELKPDSVSFLSVLSACRHAGLVEEGKRIFEEMGERHKIEAEVEHYACMVDLLGKAGL 756
Query: 519 WNEVTSARKMLK 530
+ E + ++
Sbjct: 757 FGEAVEMMRRMR 768
Score = 152 bits (384), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 120/463 (25%), Positives = 209/463 (45%), Gaps = 21/463 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H +++ GL+ H NQL+N Y R L+R +FD + + V W++MI GY + G
Sbjct: 24 VHGSLIVSGLKPH----NQLINAYSLFQRQDLSRVIFDSVRDPGVVLWNSMIRGYTRAGL 79
Query: 81 HWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
H AL F M + P+++ F L ACA +G +IH L G S ++
Sbjct: 80 HREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIHDLIAEMGLESDVYIGT 139
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+L+ MY K A V+ + V++N ++SG +N +F M
Sbjct: 140 ALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSSAALLLFHDMRSCCVDI 199
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D S L+ + L+ LH +K + ++ MY + VF
Sbjct: 200 DHVSLYNLIPAVSKLEKSDVCRCLHGLVIKKGF--IFAFSSGLIDMYCNCADLYAAESVF 257
Query: 257 RLIQDKDVISWNTLINAFSH---FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+ KD SW T++ A++H F++ + F ++M +R + AS L + +
Sbjct: 258 EEVWRKDESSWGTMMAAYAHNGFFEEVLELF----DLMRNYDVRMNKVAAASALQAAAYV 313
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
+ G IH + + DV V +L++MY+KCG + A ++F + R+++SW+ MI
Sbjct: 314 GDLVKGIAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFINIEDRDVVSWSAMI 373
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYG 432
A++ G + AI +F M +KP++VT T +L C R G ++ +++A
Sbjct: 374 ASYEQAGQHDEAISLFRDMMRIHIKPNAVTLTSVLQGCAGVAASRLGKSIHCYAIKA--D 431
Query: 433 IAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
I + + +I M + GR S + + + D V +L
Sbjct: 432 IESELETATAVISMYAKCGRFSPALKAFERL-PIKDAVAFNAL 473
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 163/361 (45%), Gaps = 15/361 (4%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV-GTN 162
L C + R L+Q +HG + SG N LI Y Q D V +SV
Sbjct: 12 LRECKNFRCLLQ---VHGSLIVSGLKP----HNQLINAY-SLFQRQDLSRVIFDSVRDPG 63
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQE-GFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
V +N++I G+ + F M +E G PD++SF L DF+ G+ +H
Sbjct: 64 VVLWNSMIRGYTRAGLHREALGFFGYMSEEKGIDPDKYSFTFALKACAGSMDFKKGLRIH 123
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
++ L+ IG ++ MY + + +VF + KDV++WNT+++ +
Sbjct: 124 DLIAEMGLESDVYIGTALVEMYCKARDLVSARQVFDKMHVKDVVTWNTMVSGLAQNGCSS 183
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
+ L F + M C + D + +++ + + + +H + ++ + + L
Sbjct: 184 AALLLFHD-MRSCCVDIDHVSLYNLIPAVSKLEKSDVCRCLHGLVI--KKGFIFAFSSGL 240
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
++MY C + A VF ++ ++ SW TM+AA+ ++G E +E+F+ M+ V+ +
Sbjct: 241 IDMYCNCADLYAAESVFEEVWRKDESSWGTMMAAYAHNGFFEEVLELFDLMRNYDVRMNK 300
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEE-YI 460
V L A + G + KG + + G+ ++ + L+ M + G L E+ +I
Sbjct: 301 VAAASALQAAAYVGDLVKG-IAIHDYAVQQGLIGDVSVATSLMSMYSKCGELEIAEQLFI 359
Query: 461 N 461
N
Sbjct: 360 N 360
>AT4G18840.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:10338719-10340356 REVERSE
LENGTH=545
Length = 545
Score = 276 bits (705), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/521 (30%), Positives = 269/521 (51%), Gaps = 45/521 (8%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYV---KCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
HA +LK GL F +++L+ + V A + + + N + +++I Y
Sbjct: 59 HAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGSPNGFTHNSVIRAYANS 118
Query: 79 GEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
+AL +F +M V P+++ F L ACA+ +G+QIHGL ++SG + FV
Sbjct: 119 STPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQIHGLFIKSGLVTDVFVE 178
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
N+L+ +Y + G A V ++VS+N+L+S ++E ++ +F M +
Sbjct: 179 NTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLVDEARALFDEMEER--- 235
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
N++ + N ++S YA ++E V
Sbjct: 236 --------------NVESW----------------------NFMISGYAAAGLVKEAKEV 259
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + +DV+SWN ++ A++H + F +M+++ + +PD FT S+L++C S
Sbjct: 260 FDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGFTLVSVLSACASLGS 319
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G+ +H ++ + + + ALV+MY+KCG I A +VF S R++ +WN++I+
Sbjct: 320 LSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRATSKRDVSTWNSIISD 379
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
HGLG+ A+EIF +M EG KP+ +TF G+L ACNH GM+ + F M + Y + P
Sbjct: 380 LSVHGLGKDALEIFSEMVYEGFKPNGITFIGVLSACNHVGMLDQARKLFEMMSSVYRVEP 439
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
I H+ C++D+LGR G++ E EE +N+ ++L SLL AC+ G + ER+A L
Sbjct: 440 TIEHYGCMVDLLGRMGKIEEAEELVNEIPADEASILLESLLGACKRFGQLEQAERIANRL 499
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
LE+ +S Y +SNLYASDG W +V R+ ++ + +
Sbjct: 500 LELNLRDSSGYAQMSNLYASDGRWEKVIDGRRNMRAERVNR 540
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 163/387 (42%), Gaps = 52/387 (13%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYA--NSVGT 161
LS ++L + QQ H L++G +F ++ L+ + ++ N +G+
Sbjct: 43 LSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPEPKTVSYAHSILNRIGS 102
Query: 162 -NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSL 220
N ++N++I + + PE VF+ ML PD++SF +L F G +
Sbjct: 103 PNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFVLKACAAFCGFEEGRQI 162
Query: 221 HCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQ 280
H +K L + N ++++Y + + E +V + +D +SWN+L++A+
Sbjct: 163 HGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGLV 222
Query: 281 GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA 340
++ F EM R + W N
Sbjct: 223 DEARALFDEMEE-----------------------------------RNVESW-----NF 242
Query: 341 LVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV-KP 399
+++ YA G + A +VF M R+++SWN M+ A+ + G +E+F +M + KP
Sbjct: 243 MISGYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKP 302
Query: 400 DSVTFTGLLIACNHSGMVRKGD---LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
D T +L AC G + +G+ +Y + +GI + L+DM + G++ +
Sbjct: 303 DGFTLVSVLSACASLGSLSQGEWVHVYIDK----HGIEIEGFLATALVDMYSKCGKIDKA 358
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHG 483
E + + D S++S VHG
Sbjct: 359 LE-VFRATSKRDVSTWNSIISDLSVHG 384
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 166/413 (40%), Gaps = 81/413 (19%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H +K GL + VFV N L+N+Y + G +ARKV D M R+ VSW++++S Y + G
Sbjct: 162 IHGLFIKSGLVTDVFVENTLVNVYGRSGYFEIARKVLDRMPVRDAVSWNSLLSAYLEKGL 221
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
A LF +M + + + N +I+
Sbjct: 222 VDEARALFDEM-----------------------EERNVESW-------------NFMIS 245
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF-VPDRF 199
Y G +A V+ + + VS+NA+++ + + EVF ML + PD F
Sbjct: 246 GYAAAGLVKEAKEVFDSMPVRDVVSWNAMVTAYAHVGCYNEVLEVFNKMLDDSTEKPDGF 305
Query: 200 SFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLI 259
+ V +L +L G +H K ++ + ++ MY++ I++ + VFR
Sbjct: 306 TLVSVLSACASLGSLSQGEWVHVYIDKHGIEIEGFLATALVDMYSKCGKIDKALEVFRAT 365
Query: 260 QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHG 319
+DV +WN++I+ S + F EM+ E +P+ TF +L++C
Sbjct: 366 SKRDVSTWNSIISDLSVHGLGKDALEIFSEMVYE-GFKPNGITFIGVLSACN-------- 416
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS--YR---NLISWNTMIA 374
G + A K+F MS YR + + M+
Sbjct: 417 ---------------------------HVGMLDQARKLFEMMSSVYRVEPTIEHYGCMVD 449
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
G G E A E+ ++ A+ S+ LL AC G + + + N +
Sbjct: 450 LLGRMGKIEEAEELVNEIPADEA---SILLESLLGACKRFGQLEQAERIANRL 499
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYA---K 347
M+ CS P IL+ S +Q HAF+ +T + D + LV A +
Sbjct: 32 MSVCSSTP-----VPILSFTERAKSLTEIQQAHAFMLKTGLFHDTFSASKLVAFAATNPE 86
Query: 348 CGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGL 407
++ YAH + +++ N + N++I A+ N E A+ +F +M V PD +FT +
Sbjct: 87 PKTVSYAHSILNRIGSPNGFTHNSVIRAYANSSTPEVALTVFREMLLGPVFPDKYSFTFV 146
Query: 408 LIACNHSGMVRKGD----LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
L AC +G L+ S G+ ++ + L+++ GR+G + +++
Sbjct: 147 LKACAAFCGFEEGRQIHGLFIKS-----GLVTDVFVENTLVNVYGRSGYFEIARKVLDRM 201
Query: 464 HHLNDPVVLGSLLSA 478
+ D V SLLSA
Sbjct: 202 -PVRDAVSWNSLLSA 215
>AT1G09410.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:3035443-3037560 FORWARD LENGTH=705
Length = 705
Score = 275 bits (704), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 169/512 (33%), Positives = 275/512 (53%), Gaps = 27/512 (5%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNE 97
N L++ Y+K G + ARKVFD M ERN VSW+A++ GY G+ +A LF +M P +
Sbjct: 83 NGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM---PEK 139
Query: 98 FVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN----SLITMYMKCGQCSDALS 153
+ +S L +Q +I Y I N S+I K G+ +A
Sbjct: 140 ----NKVSWTVMLIGFLQDGRIDDAC--KLYEMIPDKDNIARTSMIHGLCKEGRVDEARE 193
Query: 154 VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLD 212
++ + +++ +++G+ +N+ + ++F +M ++ V S+ +L G+ N
Sbjct: 194 IFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEV----SWTSMLMGYVQN-- 247
Query: 213 DFRTGMSLHCQAVKLALDCTPLIG-NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
G + + + P+I N ++S Q I + RVF +++++ SW T+I
Sbjct: 248 ----GRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVI 303
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
+ ++ F +M + +RP T SIL+ C AS HGKQ+HA L R +
Sbjct: 304 KIHERNGFELEALDLFI-LMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQF 362
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQ 391
DV V + L+ MY KCG + + +F + +++I WN++I+ + +HGLGE A+++F +
Sbjct: 363 DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCE 422
Query: 392 MKAEG-VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
M G KP+ VTF L AC+++GMV +G + SME+ +G+ P H++C++DMLGRA
Sbjct: 423 MPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRA 482
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
GR +E E I+ D V GSLL ACR H + + E AK L+E+ P + Y+LLS
Sbjct: 483 GRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLS 542
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPGYAW 542
N+YAS G W +V RK++K +RK PG +W
Sbjct: 543 NMYASQGRWADVAELRKLMKTRLVRKSPGCSW 574
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 144/327 (44%), Gaps = 53/327 (16%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK- 92
V N +++ + G + AR+VFD M ERN SW +I +++ G AL LF M+
Sbjct: 265 VIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQK 324
Query: 93 --VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
V P S LS CASL +L G+Q+H +R + +V++ L+TMY+KCG+
Sbjct: 325 QGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVK 384
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVF-KLMLQEGFVPDRFSFVGLLGFST 209
+ ++ + + +N++ISG+ + E+ +VF ++ L P+ +FV L +
Sbjct: 385 SKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACS 444
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
G+ ++ ++++ P I + YA
Sbjct: 445 YAGMVEEGLKIY-ESMESVFGVKP-----ITAHYACM----------------------- 475
Query: 270 LINAFSHFDDQGKSFLFFK--EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF 327
D G++ F + EM++ ++ PD + S+L +C H+ Q+ F
Sbjct: 476 -------VDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHS------QLDVAEF 522
Query: 328 RTRQYWDVGVHNA-----LVNMYAKCG 349
++ ++ N+ L NMYA G
Sbjct: 523 CAKKLIEIEPENSGTYILLSNMYASQG 549
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 165/396 (41%), Gaps = 55/396 (13%)
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM------ 189
NS++ Y DA ++ N +S+N L+SG+++N E ++ +VF LM
Sbjct: 52 NSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVV 111
Query: 190 ----LQEGFV---------------PDRFSF---VGLLGFSTNLDDFRTGMSLHCQAVKL 227
L +G+V P++ V L+GF L D R + C+ ++
Sbjct: 112 SWTALVKGYVHNGKVDVAESLFWKMPEKNKVSWTVMLIGF---LQDGRIDDA--CKLYEM 166
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF---SHFDDQGKSF 284
D + ++ + ++E +F + ++ VI+W T++ + + DD K F
Sbjct: 167 IPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF 226
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
E + ++ S+L + ++ LF V NA+++
Sbjct: 227 DVMPEKT--------EVSWTSMLMGYVQNGRIEDAEE----LFEVMPVKPVIACNAMISG 274
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
+ G I A +VF M RN SW T+I +G A+++F M+ +GV+P T
Sbjct: 275 LGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTL 334
Query: 405 TGLLIACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
+L C + G ++ + + + + S L+ M + G L + + ++F
Sbjct: 335 ISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVA--SVLMTMYIKCGELVKSKLIFDRF 392
Query: 464 HHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVP 499
D ++ S++S HG +GE K+ E+P
Sbjct: 393 PS-KDIIMWNSIISGYASHG---LGEEALKVFCEMP 424
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 79/140 (56%), Gaps = 7/140 (5%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +++ V+V++ L+ MY+KCG +V ++ +FD ++ + W+++ISGY G
Sbjct: 353 VHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGL 412
Query: 81 HWMALHLFSQMKV----LPNEFVFASTLSACASLRALVQGQQIHGLSLRS--GYASISFV 134
AL +F +M + PNE F +TLSAC+ + +G +I+ S+ S G I+
Sbjct: 413 GEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYE-SMESVFGVKPITAH 471
Query: 135 SNSLITMYMKCGQCSDALSV 154
++ M + G+ ++A+ +
Sbjct: 472 YACMVDMLGRAGRFNEAMEM 491
>AT1G20230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:7009570-7011852 FORWARD
LENGTH=760
Length = 760
Score = 275 bits (703), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 172/596 (28%), Positives = 288/596 (48%), Gaps = 74/596 (12%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
HA +LK G Q+ ++S +L+ Y A V + + S+S++I +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 82 WMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSL 138
++ +FS+M ++P+ V + CA L A G+QIH +S SG +FV S+
Sbjct: 98 TQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDAFVQGSM 157
Query: 139 ITMYMKCGQCSDALSVY-----------------------------------ANSVGTNS 163
MYM+CG+ DA V+ ++ + N
Sbjct: 158 FHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI 217
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
VS+N ++SGF + ++ +F+ + GF PD+ + +L + + G +H
Sbjct: 218 VSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGY 277
Query: 224 AVKLAL-----------DCTPLIGNV--IMSMYAQFNFIE------------------EV 252
+K L D G+V I+S++ QF +E +
Sbjct: 278 VIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKA 337
Query: 253 VRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+ +F L +++ +V+SW ++I + ++ F+EM ++P+ T S+L
Sbjct: 338 LEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREM-QVAGVKPNHVTIPSMLP 396
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
+C A+ HG+ H F R +V V +AL++MYAKCG I + VF+ M +NL+
Sbjct: 397 ACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVC 456
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
WN+++ F HG + + IFE + +KPD ++FT LL AC G+ +G YF M
Sbjct: 457 WNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMS 516
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIG 488
YGI P + H+SC++++LGRAG+L E + I + D V G+LL++CR+ N+ +
Sbjct: 517 EEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLA 576
Query: 489 ERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
E A+ L + P YVLLSN+YA+ GMW EV S R ++ GL+K PG +W++
Sbjct: 577 EIAAEKLFHLEPENPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQ 632
>AT2G03880.1 | Symbols: REME1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:1181560-1183452 FORWARD
LENGTH=630
Length = 630
Score = 274 bits (701), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 245/446 (54%), Gaps = 6/446 (1%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
++ + C S RA+ +G I +G+ + F+ N LI MY+K +DA ++
Sbjct: 63 TYSELIKCCISNRAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQM 122
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
N +S+ +IS + + +K E+ LML++ P+ +++ +L + D R
Sbjct: 123 PQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRM-- 180
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD 278
LHC +K L+ + + ++ ++A+ E+ + VF + D I WN++I F+
Sbjct: 181 -LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNS 239
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
+ FK M I + T S+L +CT A G Q H + + Q D+ ++
Sbjct: 240 RSDVALELFKRMKRAGFI-AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ--DLILN 296
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
NALV+MY KCGS+ A +VF++M R++I+W+TMI+ +G + A+++FE+MK+ G K
Sbjct: 297 NALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTK 356
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEE 458
P+ +T G+L AC+H+G++ G YF SM+ YGI P H+ C+ID+LG+AG+L + +
Sbjct: 357 PNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVK 416
Query: 459 YINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGM 518
+N+ D V +LL ACRV NM + E AK ++ + P Y LLSN+YA+
Sbjct: 417 LLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQK 476
Query: 519 WNEVTSARKMLKGSGLRKEPGYAWLK 544
W+ V R ++ G++KEPG +W++
Sbjct: 477 WDSVEEIRTRMRDRGIKKEPGCSWIE 502
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 209/434 (48%), Gaps = 46/434 (10%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLF 88
G + +F+ N L+NMYVK + A ++FD M +RN +SW+ MIS Y +C H AL L
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELL 150
Query: 89 SQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC 145
M V PN + ++S L +C + + + +H ++ G S FV ++LI ++ K
Sbjct: 151 VLMLRDNVRPNVYTYSSVLRSCNGMSDV---RMLHCGIIKEGLESDVFVRSALIDVFAKL 207
Query: 146 GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
G+ DALSV+ V +++ +N++I GF +N + E+FK M + GF+ ++ + +L
Sbjct: 208 GEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVL 267
Query: 206 GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVI 265
T L GM H VK D ++ N ++ MY + +E+ +RVF ++++DVI
Sbjct: 268 RACTGLALLELGMQAHVHIVKYDQDL--ILNNALVDMYCKCGSLEDALRVFNQMKERDVI 325
Query: 266 SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAF 325
+W+T+I+ + ++ F E M +P+ T +L +C+ HA L +
Sbjct: 326 TWSTMISGLAQNGYSQEALKLF-ERMKSSGTKPNYITIVGVLFACS-HAGLLEDGW---Y 380
Query: 326 LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERA 385
FR+ + K++ R + MI G G + A
Sbjct: 381 YFRSMK------------------------KLYGIDPVRE--HYGCMIDLLGKAGKLDDA 414
Query: 386 IEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP-NIGHFSCLI 444
+++ +M+ E PD+VT+ LL AC + R L + + + P + G ++ L
Sbjct: 415 VKLLNEMECE---PDAVTWRTLLGACR---VQRNMVLAEYAAKKVIALDPEDAGTYTLLS 468
Query: 445 DMLGRAGRLSEVEE 458
++ + + VEE
Sbjct: 469 NIYANSQKWDSVEE 482
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 132/264 (50%), Gaps = 19/264 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH ++K GL+S VFV + L++++ K G A VFD M + + W+++I G+ Q
Sbjct: 181 LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSR 240
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+AL LF +MK + + S L AC L L G Q H ++ Y ++N+
Sbjct: 241 SDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNA 298
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY KCG DAL V+ + ++++ +ISG +N ++ ++F+ M G P+
Sbjct: 299 LVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPN 358
Query: 198 RFSFVGLLGFSTN---LDD----FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
+ VG+L ++ L+D FR+ L+ +D ++ + + ++
Sbjct: 359 YITIVGVLFACSHAGLLEDGWYYFRSMKKLY------GIDPVREHYGCMIDLLGKAGKLD 412
Query: 251 EVVRVFRLIQ-DKDVISWNTLINA 273
+ V++ ++ + D ++W TL+ A
Sbjct: 413 DAVKLLNEMECEPDAVTWRTLLGA 436
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 34/170 (20%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFV---------SNQLLNMYVKCGRVVLARK 55
T+ ++L+ C+ GL A+L++G+Q+HV + +N L++MY KCG + A +
Sbjct: 262 TLTSVLRACT-----GL--ALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLEDALR 314
Query: 56 VFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRA 112
VF+ M ER+ ++WS MISG Q G AL LF +MK PN L AC+
Sbjct: 315 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 113 LVQG-------QQIHGLS-LRSGYASISFVSNSLITMYMKCGQCSDALSV 154
L G ++++G+ +R Y +I + K G+ DA+ +
Sbjct: 375 LEDGWYYFRSMKKLYGIDPVREHYG-------CMIDLLGKAGKLDDAVKL 417
>AT3G05240.1 | Symbols: MEF19 | mitochondrial editing factor 19 |
chr3:1493684-1495381 REVERSE LENGTH=565
Length = 565
Score = 273 bits (698), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 161/554 (29%), Positives = 274/554 (49%), Gaps = 17/554 (3%)
Query: 4 ETIGTLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVV---LARKVFDG 59
+ I + L+ C + LH ++K + +V ++L++ C + AR VF+
Sbjct: 7 KPILSQLENCRSLVELNQLHGLMIKSSVIRNVIPLSRLIDFCTTCPETMNLSYARSVFES 66
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ + W++MI GY AL + +M P+ F F L AC+ LR + G
Sbjct: 67 IDCPSVYIWNSMIRGYSNSPNPDKALIFYQEMLRKGYSPDYFTFPYVLKACSGLRDIQFG 126
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+HG +++G+ +VS L+ MYM CG+ + L V+ + N V++ +LISGFV N
Sbjct: 127 SCVHGFVVKTGFEVNMYVSTCLLHMYMCCGEVNYGLRVFEDIPQWNVVAWGSLISGFVNN 186
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC----- 231
+ E F+ M G + V LL D TG H L D
Sbjct: 187 NRFSDAIEAFREMQSNGVKANETIMVDLLVACGRCKDIVTGKWFHGFLQGLGFDPYFQSK 246
Query: 232 ---TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
++ ++ MYA+ + +F + ++ ++SWN++I +S D ++ F
Sbjct: 247 VGFNVILATSLIDMYAKCGDLRTARYLFDGMPERTLVSWNSIITGYSQNGDAEEALCMFL 306
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
+M+ + I PD TF S++ + G+ IHA++ +T D + ALVNMYAK
Sbjct: 307 DML-DLGIAPDKVTFLSVIRASMIQGCSQLGQSIHAYVSKTGFVKDAAIVCALVNMYAKT 365
Query: 349 GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGL 407
G A K F + ++ I+W +I +HG G A+ IF++M+ +G PD +T+ G+
Sbjct: 366 GDAESAKKAFEDLEKKDTIAWTVVIIGLASHGHGNEALSIFQRMQEKGNATPDGITYLGV 425
Query: 408 LIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
L AC+H G+V +G YF M +G+ P + H+ C++D+L RAGR E E +
Sbjct: 426 LYACSHIGLVEEGQRYFAEMRDLHGLEPTVEHYGCMVDILSRAGRFEEAERLVKTMPVKP 485
Query: 468 DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARK 527
+ + G+LL+ C +H N+ + +R+ ++ E + + YVLLSN+YA G W +V R+
Sbjct: 486 NVNIWGALLNGCDIHENLELTDRIRSMVAEPEELGSGIYVLLSNIYAKAGRWADVKLIRE 545
Query: 528 MLKGSGLRKEPGYA 541
+K + K G++
Sbjct: 546 SMKSKRVDKVLGHS 559
>AT1G71490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:26933326-26935371 REVERSE
LENGTH=681
Length = 681
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 163/586 (27%), Positives = 296/586 (50%), Gaps = 44/586 (7%)
Query: 1 MMLETIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKV 56
++L + +LL C F +HA + G++ H + +L+ Y A+ +
Sbjct: 41 LVLHSAASLLSACVDVRAFLAGVQVHAHCISSGVEYHSVLVPKLVTFYSAFNLHNEAQSI 100
Query: 57 FDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRAL 113
+ + + W+ +I+ Y + + + +M + P+ F + S L AC +
Sbjct: 101 IENSDILHPLPWNVLIASYAKNELFEEVIAAYKRMVSKGIRPDAFTYPSVLKACGETLDV 160
Query: 114 VQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGF 173
G+ +HG S Y S +V N+LI+MY + A ++ ++VS+NA+I+ +
Sbjct: 161 AFGRVVHGSIEVSSYKSSLYVCNALISMYKRFRNMGIARRLFDRMFERDAVSWNAVINCY 220
Query: 174 VENHEPEKGFEVFKLM-------------LQEGFVPDRFSFVGLLG-------FSTNLDD 213
+ FE+F M + G ++VG LG F T+LD
Sbjct: 221 ASEGMWSEAFELFDKMWFSGVEVSVITWNIISGGCLQTGNYVGALGLISRMRNFPTSLDP 280
Query: 214 ---------------FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
R G +H A+ + D + N +++MY++ + + VFR
Sbjct: 281 VAMIIGLKACSLIGAIRLGKEIHGLAIHSSYDGIDNVRNTLITMYSKCKDLRHALIVFRQ 340
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
++ + +WN++I+ ++ + ++ +EM+ +P+ T ASIL C A+ H
Sbjct: 341 TEENSLCTWNSIISGYAQLNKSEEASHLLREML-VAGFQPNSITLASILPLCARIANLQH 399
Query: 319 GKQIHAFLFRTRQYWDVG-VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
GK+ H ++ R + + D + N+LV++YAK G I A +V MS R+ +++ ++I +G
Sbjct: 400 GKEFHCYILRRKCFKDYTMLWNSLVDVYAKSGKIVAAKQVSDLMSKRDEVTYTSLIDGYG 459
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
N G G A+ +F++M G+KPD VT +L AC+HS +V +G+ F M+ YGI P +
Sbjct: 460 NQGEGGVALALFKEMTRSGIKPDHVTVVAVLSACSHSKLVHEGERLFMKMQCEYGIRPCL 519
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
HFSC++D+ GRAG L++ ++ I+ + +LL+AC +HGN IG+ A+ LLE
Sbjct: 520 QHFSCMVDLYGRAGFLAKAKDIIHNMPYKPSGATWATLLNACHIHGNTQIGKWAAEKLLE 579
Query: 498 VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
+ P YVL++N+YA+ G W+++ R +++ G++K+PG AW+
Sbjct: 580 MKPENPGYYVLIANMYAAAGSWSKLAEVRTIMRDLGVKKDPGCAWI 625
>AT5G59600.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:24011315-24012919 REVERSE
LENGTH=534
Length = 534
Score = 273 bits (697), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 165/510 (32%), Positives = 264/510 (51%), Gaps = 43/510 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LHA ++ G+ ++ +L+ YV+CG+V+ ARKVFD M +R+ MI + G
Sbjct: 38 LHAHLVTSGIARLTRIAAKLVTFYVECGKVLDARKVFDEMPKRDISGCVVMIGACARNGY 97
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ +L F +M + + F+ S L A +L G+ IH L L+ Y S +F+ +S
Sbjct: 98 YQESLDFFREMYKDGLKLDAFIVPSLLKASRNLLDREFGKMIHCLVLKFSYESDAFIVSS 157
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
LI MY K G+ +A V+++ + V +NA+ISG+ N + ++ + K M G PD
Sbjct: 158 LIDMYSKFGEVGNARKVFSDLGEQDLVVFNAMISGYANNSQADEALNLVKDMKLLGIKPD 217
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
++ N ++S ++ E+V +
Sbjct: 218 VITW-----------------------------------NALISGFSHMRNEEKVSEILE 242
Query: 258 LI----QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
L+ DV+SW ++I+ H K+F FK+M+ + P+ T ++L +CT
Sbjct: 243 LMCLDGYKPDVVSWTSIISGLVHNFQNEKAFDAFKQMLTH-GLYPNSATIITLLPACTTL 301
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
A HGK+IH + T V +AL++MY KCG I A +F K + +++N+MI
Sbjct: 302 AYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKTPKKTTVTFNSMI 361
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGI 433
+ NHGL ++A+E+F+QM+A G K D +TFT +L AC+H+G+ G F M+ Y I
Sbjct: 362 FCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACSHAGLTDLGQNLFLLMQNKYRI 421
Query: 434 APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAK 493
P + H++C++D+LGRAG+L E E I D V G+LL+ACR HGNM + AK
Sbjct: 422 VPRLEHYACMVDLLGRAGKLVEAYEMIKAMRMEPDLFVWGALLAACRNHGNMELARIAAK 481
Query: 494 LLLEVPPVTTSPYVLLSNLYASDGMWNEVT 523
L E+ P + +LL++LYA+ G W V
Sbjct: 482 HLAELEPENSGNGLLLTSLYANAGSWESVV 511
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 107/225 (47%), Gaps = 7/225 (3%)
Query: 195 VPDRF------SFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
VP F S+V L+ + F G LH V + I +++ Y +
Sbjct: 7 VPSSFRLLSIGSYVELIEANGRDRLFCRGRVLHAHLVTSGIARLTRIAAKLVTFYVECGK 66
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+ + +VF + +D+ +I A + +S FF+EM + ++ D F S+L
Sbjct: 67 VLDARKVFDEMPKRDISGCVVMIGACARNGYYQESLDFFREMYKD-GLKLDAFIVPSLLK 125
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
+ GK IH + + D + ++L++MY+K G +G A KVFS + ++L+
Sbjct: 126 ASRNLLDREFGKMIHCLVLKFSYESDAFIVSSLIDMYSKFGEVGNARKVFSDLGEQDLVV 185
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
+N MI+ + N+ + A+ + + MK G+KPD +T+ L+ +H
Sbjct: 186 FNAMISGYANNSQADEALNLVKDMKLLGIKPDVITWNALISGFSH 230
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 5 TIGTLLQRCSKT--MTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI TLL C+ M G +H + GL+ H FV + LL+MY KCG + A +F
Sbjct: 290 TIITLLPACTTLAYMKHGKEIHGYSVVTGLEDHGFVRSALLDMYGKCGFISEAMILFRKT 349
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLP---NEFVFASTLSACA 108
++ TV++++MI Y G A+ LF QM+ + F + L+AC+
Sbjct: 350 PKKTTVTFNSMIFCYANHGLADKAVELFDQMEATGEKLDHLTFTAILTACS 400
>AT5G55740.1 | Symbols: CRR21 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:22561941-22564433 REVERSE
LENGTH=830
Length = 830
Score = 271 bits (693), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 166/599 (27%), Positives = 292/599 (48%), Gaps = 75/599 (12%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
G+H V+K GL+ VFV++ L +MY KCG + A KVFD + +RN V+W+A++ GY Q G
Sbjct: 194 GVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYVQNG 253
Query: 80 EHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
++ A+ LFS M+ V P ++ LSA A++ + +G+Q H +++ +G + +
Sbjct: 254 KNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNILGT 313
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
SL+ Y K G A V+ + V++N +ISG+V+ E + +LM E
Sbjct: 314 SLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQQGLVEDAIYMCQLMRLEKLKY 373
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD---------------CTPLIG----- 236
D + L+ + ++ + G + C ++ + + C ++
Sbjct: 374 DCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIVDAKKVF 433
Query: 237 -----------NVIMSMYAQFNFIEEVVRVF--------------------------RLI 259
N +++ YA+ E +R+F ++
Sbjct: 434 DSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLLRNGQVD 493
Query: 260 QDKD-------------VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASI 306
+ KD +ISW T++N ++ LF ++M E +RP+ F+
Sbjct: 494 EAKDMFLQMQSSGIIPNLISWTTMMNGMVQNGCSEEAILFLRKM-QESGLRPNAFSITVA 552
Query: 307 LASCTWHASFLHGKQIHAFLFRTRQYWD-VGVHNALVNMYAKCGSIGYAHKVFSKMSYRN 365
L++C AS G+ IH ++ R Q+ V + +LV+MYAKCG I A KVF Y
Sbjct: 553 LSACAHLASLHIGRTIHGYIIRNLQHSSLVSIETSLVDMYAKCGDINKAEKVFGSKLYSE 612
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
L N MI+A+ +G + AI ++ ++ G+KPD++T T +L ACNH+G + + F
Sbjct: 613 LPLSNAMISAYALYGNLKEAIALYRSLEGVGLKPDNITITNVLSACNHAGDINQAIEIFT 672
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNM 485
+ + + P + H+ ++D+L AG + I + D ++ SL+++C
Sbjct: 673 DIVSKRSMKPCLEHYGLMVDLLASAGETEKALRLIEEMPFKPDARMIQSLVASCNKQRKT 732
Query: 486 AIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ + L++ LLE P + YV +SN YA +G W+EV R+M+K GL+K+PG +W++
Sbjct: 733 ELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQ 791
Score = 214 bits (546), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 139/502 (27%), Positives = 257/502 (51%), Gaps = 18/502 (3%)
Query: 4 ETIGTLLQRC--SKTMTFG--LHAAVLKIG--LQSHVFVSNQLLNMYVKCGRVVLARKVF 57
E G +LQ C + ++ G +HA +LK G + ++ +L+ Y KC + +A +F
Sbjct: 71 EIYGEILQGCVYERDLSTGKQIHARILKNGDFYARNEYIETKLVIFYAKCDALEIAEVLF 130
Query: 58 DGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALV 114
+ RN SW+A+I + G AL F +M ++ P+ FV + AC +L+
Sbjct: 131 SKLRVRNVFSWAAIIGVKCRIGLCEGALMGFVEMLENEIFPDNFVVPNVCKACGALKWSR 190
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
G+ +HG ++SG FV++SL MY KCG DA V+ N+V++NAL+ G+V
Sbjct: 191 FGRGVHGYVVKSGLEDCVFVASSLADMYGKCGVLDDASKVFDEIPDRNAVAWNALMVGYV 250
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
+N + E+ +F M ++G P R + L S N+ G H A+ ++ +
Sbjct: 251 QNGKNEEAIRLFSDMRKQGVEPTRVTVSTCLSASANMGGVEEGKQSHAIAIVNGMELDNI 310
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG--KSFLFFKEMMN 292
+G +++ Y + IE VF + +KDV++WN +I+ + QG + ++ ++M
Sbjct: 311 LGTSLLNFYCKVGLIEYAEMVFDRMFEKDVVTWNLIISGYVQ---QGLVEDAIYMCQLMR 367
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
++ D T A+++++ + GK++ + R D+ + + +++MYAKCGSI
Sbjct: 368 LEKLKYDCVTLATLMSAAARTENLKLGKEVQCYCIRHSFESDIVLASTVMDMYAKCGSIV 427
Query: 353 YAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
A KVF ++LI WNT++AA+ GL A+ +F M+ EGV P+ +T+ ++++
Sbjct: 428 DAKKVFDSTVEKDLILWNTLLAAYAESGLSGEALRLFYGMQLEGVPPNVITWNLIILSLL 487
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN---DP 469
+G V + F M+++ GI PN+ ++ +++ + + G E ++ K +
Sbjct: 488 RNGQVDEAKDMFLQMQSS-GIIPNLISWTTMMNGMVQNGCSEEAILFLRKMQESGLRPNA 546
Query: 470 VVLGSLLSACRVHGNMAIGERL 491
+ LSAC ++ IG +
Sbjct: 547 FSITVALSACAHLASLHIGRTI 568
>AT3G26782.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9850594-9852682 FORWARD
LENGTH=659
Length = 659
Score = 270 bits (689), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 149/496 (30%), Positives = 259/496 (52%), Gaps = 11/496 (2%)
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQG 116
+ + + SW+++I+ + G+ AL FS M+ L P F + AC+SL + G
Sbjct: 36 VDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSG 95
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+Q H + GY S FVS++LI MY CG+ DA V+ N VS+ ++I G+ N
Sbjct: 96 KQTHQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLN 155
Query: 177 HEPEKGFEVFKLML------QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD 230
+FK +L + D V ++ + + S+H +K D
Sbjct: 156 GNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFD 215
Query: 231 CTPLIGNVIMSMYAQFNF--IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
+GN ++ YA+ + ++F I DKD +S+N++++ ++ ++F F+
Sbjct: 216 RGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFR 275
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
++ + + T +++L + + + GK IH + R DV V ++++MY KC
Sbjct: 276 RLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC 335
Query: 349 GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
G + A K F +M +N+ SW MIA +G HG +A+E+F M GV+P+ +TF +L
Sbjct: 336 GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVL 395
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND 468
AC+H+G+ +G +FN+M+ +G+ P + H+ C++D+LGRAG L + + I + D
Sbjct: 396 AACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPD 455
Query: 469 PVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKM 528
++ SLL+ACR+H N+ + E L E+ Y+LLS++YA G W +V R +
Sbjct: 456 SIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMI 515
Query: 529 LKGSGLRKEPGYAWLK 544
+K GL K PG++ L+
Sbjct: 516 MKNRGLVKPPGFSLLE 531
Score = 161 bits (408), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 212/450 (47%), Gaps = 50/450 (11%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
H G QS +FVS+ L+ MY CG++ ARKVFD + +RN VSW++MI GYD G
Sbjct: 99 HQQAFVFGYQSDIFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNA 158
Query: 82 WMALHLFSQMKVLPNE---------FVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
A+ LF + V N+ S +SAC+ + A + IH ++ G+
Sbjct: 159 LDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGV 218
Query: 133 FVSNSLITMYMKCGQCSDALS--VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
V N+L+ Y K G+ A++ ++ V + VSYN+++S + ++ + FEVF+ ++
Sbjct: 219 SVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 191 QEGFVP-DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
+ V + + +L ++ R G +H Q +++ L+ ++G I+ MY + +
Sbjct: 279 KNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRV 338
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
E + F +++K+V SW +I + K+ F M++ +RP+ TF S+LA+
Sbjct: 339 ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS-GVRPNYITFVSVLAA 397
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
C+ HA L W NA+ + G H +
Sbjct: 398 CS-----------HAGLHVEGWRW----FNAMKGRFGV--EPGLEH-------------Y 427
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
M+ G G ++A ++ ++MK +KPDS+ ++ LL AC V ++ S+
Sbjct: 428 GCMVDLLGRAGFLQKAYDLIQRMK---MKPDSIIWSSLLAACRIHKNVELAEI---SVAR 481
Query: 430 AYGI-APNIGHFSCLIDMLGRAGRLSEVEE 458
+ + + N G++ L + AGR +VE
Sbjct: 482 LFELDSSNCGYYMLLSHIYADAGRWKDVER 511
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 112/218 (51%), Gaps = 12/218 (5%)
Query: 1 MMLETIG--TLLQRCS----KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGR--VVL 52
M L+++G +++ CS K +T +H+ V+K G V V N LL+ Y K G V +
Sbjct: 179 MFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAV 238
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLP-NEFVFASTLSACA 108
ARK+FD + +++ VS+++++S Y Q G A +F ++ KV+ N ++ L A +
Sbjct: 239 ARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVS 298
Query: 109 SLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNA 168
AL G+ IH +R G V S+I MY KCG+ A + N S+ A
Sbjct: 299 HSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTA 358
Query: 169 LISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLG 206
+I+G+ + K E+F M+ G P+ +FV +L
Sbjct: 359 MIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLA 396
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 3/99 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V+++GL+ V V +++MY KCGRV ARK FD M +N SW+AMI+GY G
Sbjct: 309 IHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGH 368
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
AL LF M V PN F S L+AC+ V+G
Sbjct: 369 AAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEG 407
>AT2G35030.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14761080-14762963 REVERSE
LENGTH=627
Length = 627
Score = 269 bits (687), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 164/563 (29%), Positives = 283/563 (50%), Gaps = 53/563 (9%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
F L ++ + V L+ K G++ ARK+FDG+ ER+ V+W+ +I+GY +
Sbjct: 31 FNLVRSIYSSSSRPRVPQPEWLIGELCKVGKIAEARKLFDGLPERDVVTWTHVITGYIKL 90
Query: 79 GEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSL 138
G+ A LF ++ N + + +S + L + + S N++
Sbjct: 91 GDMREARELFDRVDSRKNVVTWTAMVSGYLRSKQLSIAEMLFQEMPERNVVSW----NTM 146
Query: 139 ITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDR 198
I Y + G+ AL ++ N VS+N+++ V+ ++ +F+ M + V
Sbjct: 147 IDGYAQSGRIDKALELFDEMPERNIVSWNSMVKALVQRGRIDEAMNLFERMPRRDVVS-W 205
Query: 199 FSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP----LIGNVIMSMYAQFNFIEEVVR 254
+ V L + +D+ R DC P + N +++ YAQ N I+E +
Sbjct: 206 TAMVDGLAKNGKVDEARR-----------LFDCMPERNIISWNAMITGYAQNNRIDEADQ 254
Query: 255 VFRLIQDKDVISWNTLINAFSH----------FD---------------------DQGKS 283
+F+++ ++D SWNT+I F FD + ++
Sbjct: 255 LFQVMPERDFASWNTMITGFIRNREMNKACGLFDRMPEKNVISWTTMITGYVENKENEEA 314
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
F +M+ + S++P+ T+ SIL++C+ A + G+QIH + ++ + V +AL+N
Sbjct: 315 LNVFSKMLRDGSVKPNVGTYVSILSACSDLAGLVEGQQIHQLISKSVHQKNEIVTSALLN 374
Query: 344 MYAKCGSIGYAHKVFSK--MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
MY+K G + A K+F + R+LISWN+MIA + +HG G+ AIE++ QM+ G KP +
Sbjct: 375 MYSKSGELIAARKMFDNGLVCQRDLISWNSMIAVYAHHGHGKEAIEMYNQMRKHGFKPSA 434
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
VT+ LL AC+H+G+V KG +F + + H++CL+D+ GRAGRL +V +IN
Sbjct: 435 VTYLNLLFACSHAGLVEKGMEFFKDLVRDESLPLREEHYTCLVDLCGRAGRLKDVTNFIN 494
Query: 462 KFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNE 521
G++LSAC VH ++I + + K +LE YVL+SN+YA++G E
Sbjct: 495 CDDARLSRSFYGAILSACNVHNEVSIAKEVVKKVLETGSDDAGTYVLMSNIYAANGKREE 554
Query: 522 VTSARKMLKGSGLRKEPGYAWLK 544
R +K GL+K+PG +W+K
Sbjct: 555 AAEMRMKMKEKGLKKQPGCSWVK 577
>AT3G46790.1 | Symbols: CRR2 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:17231975-17233948 REVERSE
LENGTH=657
Length = 657
Score = 268 bits (685), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 147/484 (30%), Positives = 249/484 (51%), Gaps = 6/484 (1%)
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
+S + +I + G+ A+ + SQ + P++ + + C +L ++H L
Sbjct: 47 ISNNQLIQSLCKEGKLKQAIRVLSQ-ESSPSQQTYELLILCCGHRSSLSDALRVHRHILD 105
Query: 126 SGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEV 185
+G F++ LI MY G A V+ + +NAL E+ +
Sbjct: 106 NGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNALFRALTLAGHGEEVLGL 165
Query: 186 FKLMLQEGFVPDRFSFVGLL----GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
+ M + G DRF++ +L ++ G +H + I ++
Sbjct: 166 YWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHLTRRGYSSHVYIMTTLVD 225
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC-SIRPDD 300
MYA+F ++ VF + ++V+SW+ +I ++ ++ F+EMM E P+
Sbjct: 226 MYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMRETKDSSPNS 285
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
T S+L +C A+ GK IH ++ R + V +ALV MY +CG + +VF +
Sbjct: 286 VTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDR 345
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
M R+++SWN++I+++G HG G++AI+IFE+M A G P VTF +L AC+H G+V +G
Sbjct: 346 MHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEG 405
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACR 480
F +M +GI P I H++C++D+LGRA RL E + + P V GSLL +CR
Sbjct: 406 KRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCR 465
Query: 481 VHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGY 540
+HGN+ + ER ++ L + P YVLL+++YA MW+EV +K+L+ GL+K PG
Sbjct: 466 IHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGR 525
Query: 541 AWLK 544
W++
Sbjct: 526 CWME 529
Score = 135 bits (340), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 15/389 (3%)
Query: 11 QRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSA 70
R S + +H +L G F++ +L+ MY G V ARKVFD +R W+A
Sbjct: 89 HRSSLSDALRVHRHILDNGSDQDPFLATKLIGMYSDLGSVDYARKVFDKTRKRTIYVWNA 148
Query: 71 MISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACA----SLRALVQGQQIHGLS 123
+ G L L+ +M V + F + L AC ++ L++G++IH
Sbjct: 149 LFRALTLAGHGEEVLGLYWKMNRIGVESDRFTYTYVLKACVASECTVNHLMKGKEIHAHL 208
Query: 124 LRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGF 183
R GY+S ++ +L+ MY + G A V+ N VS++A+I+ + +N + +
Sbjct: 209 TRRGYSSHVYIMTTLVDMYARFGCVDYASYVFGGMPVRNVVSWSAMIACYAKNGKAFEAL 268
Query: 184 EVFKLMLQE--GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
F+ M++E P+ + V +L +L G +H ++ LD + + +++
Sbjct: 269 RTFREMMRETKDSSPNSVTMVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVT 328
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDF 301
MY + +E RVF + D+DV+SWN+LI+++ K+ F+EM+ P
Sbjct: 329 MYGRCGKLEVGQRVFDRMHDRDVVSWNSLISSYGVHGYGKKAIQIFEEMLAN-GASPTPV 387
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA-LVNMYAKCGSIGYAHKVFSK 360
TF S+L +C+ GK++ ++R H A +V++ + + A K+
Sbjct: 388 TFVSVLGACSHEGLVEEGKRLFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQD 447
Query: 361 M-SYRNLISWNTMIAAFGNHG---LGERA 385
M + W +++ + HG L ERA
Sbjct: 448 MRTEPGPKVWGSLLGSCRIHGNVELAERA 476
>AT4G19220.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10505266-10508121 REVERSE
LENGTH=932
Length = 932
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 165/530 (31%), Positives = 278/530 (52%), Gaps = 30/530 (5%)
Query: 20 GLHAAVLKIGLQSHVF-VSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
+H +++ +QS V N +++MY KCG A +F + R+ VSW++MIS + Q
Sbjct: 414 AVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELLFKTTTHRDLVSWNSMISAFSQN 473
Query: 79 GEHWMALHLFSQM--KVLPNEFVFASTL---SACASLRALVQGQQIHGLSLRSGYASISF 133
G A +LF ++ + ++F ++ L ++C S +L+ G+ +H + G + +F
Sbjct: 474 GFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSSDSLIFGKSVHCWLQKLGDLTSAF 533
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
+ L TM S + S+N++ISG + + F+ M +EG
Sbjct: 534 LR--LETM----------------SETRDLTSWNSVISGCASSGHHLESLRAFQAMSREG 575
Query: 194 FVP-DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
+ D + +G + S NL G H A+K + + N +++MY + IE
Sbjct: 576 KIRHDLITLLGTISASGNLGLVLQGRCFHGLAIKSLRELDTQLQNTLITMYGRCKDIESA 635
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
V+VF LI D ++ SWN +I+A S + F F+ + + P++ TF +L++ T
Sbjct: 636 VKVFGLISDPNLCSWNCVISALSQNKAGREVFQLFRNL----KLEPNEITFVGLLSASTQ 691
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTM 372
S +G Q H L R + V ALV+MY+ CG + KVF ++ +WN++
Sbjct: 692 LGSTSYGMQAHCHLIRRGFQANPFVSAALVDMYSSCGMLETGMKVFRNSGVNSISAWNSV 751
Query: 373 IAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
I+A G HG+GE+A+E+F+++ + ++P+ +F LL AC+HSG + +G Y+ ME +
Sbjct: 752 ISAHGFHGMGEKAMELFKELSSNSEMEPNKSSFISLLSACSHSGFIDEGLSYYKQMEEKF 811
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERL 491
G+ P H ++DMLGRAG+L E E+I V G+LLSAC HG+ +G+ +
Sbjct: 812 GVKPVTEHRVWIVDMLGRAGKLREAYEFITGIGEPQKAGVWGALLSACNYHGDTKLGKEV 871
Query: 492 AKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
A++L E+ P S Y+ L+N Y G W E RKM++ + L+K PGY+
Sbjct: 872 AEVLFEMEPDNASYYISLANTYVGLGGWEEAVRLRKMVEDNALKKLPGYS 921
Score = 166 bits (419), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 115/419 (27%), Positives = 213/419 (50%), Gaps = 8/419 (1%)
Query: 4 ETIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER 63
+ + + + R +H LK GL + S++LL Y + G +V + +FD + E+
Sbjct: 92 DVLRSFMMRTETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEK 151
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQ---IH 120
+ + W++MI+ +Q G + A+ LF +M NEF + L A ++L +L ++ +H
Sbjct: 152 DVIVWNSMITALNQNGRYIAAVGLFIEMIHKGNEFDSTTLLLAASALSSLHLSRKCSMLH 211
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
L++ +G S + N+L+ +Y K S A V+ + + VS+N +++ + N P
Sbjct: 212 CLAIETGLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPR 271
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK--LALDCTPLIGNV 238
K + FK M G D +F ++ +++++ G SLH +K + + +GN
Sbjct: 272 KSLQYFKSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNS 331
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
I+SMY++ E VF + +DVIS N ++N F+ ++F +M + I+P
Sbjct: 332 IISMYSKCGDTEAAETVFEELVCRDVISSNAILNGFAANGMFEEAFGILNQMQSVDKIQP 391
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTR-QYWDVGVHNALVNMYAKCGSIGYAHKV 357
D T SI + C + G+ +H + R Q + V N++++MY KCG A +
Sbjct: 392 DIATVVSITSICGDLSFSREGRAVHGYTVRMEMQSRALEVINSVIDMYGKCGLTTQAELL 451
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE--GVKPDSVTFTGLLIACNHS 414
F ++R+L+SWN+MI+AF +G +A +F+++ +E K T +L +C+ S
Sbjct: 452 FKTTTHRDLVSWNSMISAFSQNGFTHKAKNLFKEVVSEYSCSKFSLSTVLAILTSCDSS 510
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 124/249 (49%), Gaps = 8/249 (3%)
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
+ T S+HC A+K L + +++ Y + + +F +++KDVI WN++I
Sbjct: 102 ETETPRSVHCFALKCGLLQDLATSSKLLTFYGRTGELVSSSCLFDELKEKDVIVWNSMIT 161
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQ---IHAFLFRT 329
A + + F EM++ + ++F ++L + + +S ++ +H T
Sbjct: 162 ALNQNGRYIAAVGLFIEMIH----KGNEFDSTTLLLAASALSSLHLSRKCSMLHCLAIET 217
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
D + NAL+N+YAK ++ A VF+ M +R+++SWNT++ +G ++++ F
Sbjct: 218 GLVGDSSLCNALMNLYAKGENLSSAECVFTHMEHRDIVSWNTIMTKCLANGHPRKSLQYF 277
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD-LYFNSMEAAYGIAPNIGHFSCLIDMLG 448
+ M G + D+VTF+ ++ AC+ + G+ L+ +++ Y ++ + +I M
Sbjct: 278 KSMTGSGQEADTVTFSCVISACSSIEELTLGESLHGLVIKSGYSPEAHVSVGNSIISMYS 337
Query: 449 RAGRLSEVE 457
+ G E
Sbjct: 338 KCGDTEAAE 346
>AT5G13270.1 | Symbols: RARE1 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4246954-4249212 REVERSE
LENGTH=752
Length = 752
Score = 267 bits (683), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 153/523 (29%), Positives = 267/523 (51%), Gaps = 4/523 (0%)
Query: 26 LKIGLQS-HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
+++G+++ V + N +L MY +C + A K+FD MSE N VS + MIS Y + G A
Sbjct: 109 MRMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKA 168
Query: 85 LHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
+ LFS M P ++ + L + + RAL G+QIH +R+G S + + ++ M
Sbjct: 169 VGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNM 228
Query: 142 YMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSF 201
Y+KCG A V+ V+ L+ G+ + ++F ++ EG D F F
Sbjct: 229 YVKCGWLVGAKRVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVF 288
Query: 202 VGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD 261
+L +L++ G +H KL L+ +G ++ Y + + E R F+ I++
Sbjct: 289 SVVLKACASLEELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIRE 348
Query: 262 KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQ 321
+ +SW+ +I+ + ++ FK + ++ + + FT+ SI +C+ A G Q
Sbjct: 349 PNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQ 408
Query: 322 IHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGL 381
+HA + +AL+ MY+KCG + A++VF M ++++W I+ +G
Sbjct: 409 VHADAIKRSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGN 468
Query: 382 GERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFS 441
A+ +FE+M + G+KP+SVTF +L AC+H+G+V +G ++M Y +AP I H+
Sbjct: 469 ASEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYD 528
Query: 442 CLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPV 501
C+ID+ R+G L E +++ D + LS C H N+ +GE + L ++ P
Sbjct: 529 CMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
Query: 502 TTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
T+ YVL NLY G W E K++ L+KE +W++
Sbjct: 589 DTAGYVLPFNLYTWAGKWEEAAEMMKLMNERMLKKELSCSWIQ 631
Score = 169 bits (429), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 201/394 (51%), Gaps = 16/394 (4%)
Query: 15 KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMI 72
+ + FG +HA V++ GL S+ + ++NMYVKCG +V A++VFD M+ + V+ + ++
Sbjct: 198 RALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVACTGLM 257
Query: 73 SGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA 129
GY Q G AL LF + V + FVF+ L ACASL L G+QIH + G
Sbjct: 258 VGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLGLE 317
Query: 130 SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFK-L 188
S V L+ Y+KC A + N VS++A+ISG+ + + E+ + FK L
Sbjct: 318 SEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSL 377
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
+ + + F++ + + L D G +H A+K +L + + +++MY++
Sbjct: 378 RSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKCGC 437
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+++ VF + + D+++W I+ +++ + ++ F++M++ C ++P+ TF ++L
Sbjct: 438 LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS-CGMKPNSVTFIAVLT 496
Query: 309 SCTWHASFLHGKQIHAFLFRTRQY---WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR- 364
+C+ GK H R+Y + ++ ++++YA+ G + A K M +
Sbjct: 497 ACSHAGLVEQGK--HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEP 554
Query: 365 NLISWNTMIAAFGNHG---LGERAIEIFEQMKAE 395
+ +SW ++ H LGE A E Q+ E
Sbjct: 555 DAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPE 588
>AT5G19020.1 | Symbols: MEF18 | mitochondrial editing factor 18 |
chr5:6352771-6354828 REVERSE LENGTH=685
Length = 685
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 174/609 (28%), Positives = 281/609 (46%), Gaps = 99/609 (16%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCG-------------------------------R 49
+H VLK GL S+ ++ N +LNMY KC R
Sbjct: 63 IHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVFRDHAKLDSASFNIMVDGYVRSRR 122
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSA 106
+ A K+FD M ER+ VS++ +I GY Q + A+ LF +M+ ++ NE A+ +SA
Sbjct: 123 LWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAMELFREMRNLGIMLNEVTLATVISA 182
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY 166
C+ L + + + L+++ FVS +L+ MY C DA ++ N V++
Sbjct: 183 CSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEMPERNLVTW 242
Query: 167 NALISGFVENHEPEKGFEVFKL-------------------------------MLQEGFV 195
N +++G+ + E+ E+F ML+ G
Sbjct: 243 NVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYTEMLRCGMK 302
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN-------- 247
P V LL S G+ LH VK DC + I+ YA N
Sbjct: 303 PSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQ 362
Query: 248 -----------------------FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSF 284
+E+ VF DKD+ SWN +I+ ++ +
Sbjct: 363 FEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLAL 422
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
F+EM++ ++PD T S+ ++ + S GK+ H +L + + + A+++M
Sbjct: 423 HLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDM 482
Query: 345 YAKCGSIGYAHKVFSK---MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
YAKCGSI A +F + +S + WN +I HG + A++++ +++ +KP+S
Sbjct: 483 YAKCGSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNS 542
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
+TF G+L AC H+G+V G YF SM++ +GI P+I H+ C++D+LG+AGRL E +E I
Sbjct: 543 ITFVGVLSACCHAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLGKAGRLEEAKEMIK 602
Query: 462 KFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNE 521
K D ++ G LLSA R HGN+ I E A L + P V+LSN+YA G W +
Sbjct: 603 KMPVKADVMIWGMLLSASRTHGNVEIAELAATELAAIDPSHGGCKVMLSNVYADAGRWED 662
Query: 522 VTSARKMLK 530
V R+ ++
Sbjct: 663 VALVREEMR 671
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/464 (21%), Positives = 188/464 (40%), Gaps = 99/464 (21%)
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY 155
E S L +CAS + G+QIH L+SG S ++ NS++ MY KC +DA SV+
Sbjct: 40 TERALVSALGSCASSNDVTCGRQIHCRVLKSGLDSNGYICNSVLNMYAKCRLLADAESVF 99
Query: 156 ANSVGTNS-------------------------------VSYNALISGFVENHEPEKGFE 184
+ +S VSY LI G+ +N++ + E
Sbjct: 100 RDHAKLDSASFNIMVDGYVRSRRLWDALKLFDVMPERSCVSYTTLIKGYAQNNQWSEAME 159
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG-------- 236
+F+ M G + + + ++ ++L L A+KL L+ +
Sbjct: 160 LFREMRNLGIMLNEVTLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYC 219
Query: 237 -----------------------NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINA 273
NV+++ Y++ IE+ +F I +KD++SW T+I+
Sbjct: 220 LCLCLKDARKLFDEMPERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDG 279
Query: 274 FSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR----- 328
+ ++ +++ EM+ C ++P + +L++ G Q+H + +
Sbjct: 280 CLRKNQLDEALVYYTEML-RCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDC 338
Query: 329 --------------------TRQYWDVGV------HNALVNMYAKCGSIGYAHKVFSKMS 362
Q ++ V NAL+ + K G + A +VF +
Sbjct: 339 YDFLQATIIHFYAVSNDIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTH 398
Query: 363 YRNLISWNTMIAAFGNHGLGERAIEIFEQM-KAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
+++ SWN MI+ + + A+ +F +M + VKPD++T + A + G + +G
Sbjct: 399 DKDIFSWNAMISGYAQSLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGK 458
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHH 465
+ + + I PN + +IDM + G +E +N FH
Sbjct: 459 RAHDYLNFST-IPPNDNLTAAIIDMYAKCG---SIETALNIFHQ 498
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 106/455 (23%), Positives = 184/455 (40%), Gaps = 84/455 (18%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ T++ CS L + +K+ L+ VFVS LL+MY C + ARK+FD M
Sbjct: 175 TLATVISACSHLGGIWDCRMLQSLAIKLKLEGRVFVSTNLLHMYCLCLCLKDARKLFDEM 234
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---------------------------- 92
ERN V+W+ M++GY + G A LF Q+
Sbjct: 235 PERNLVTWNVMLNGYSKAGLIEQAEELFDQITEKDIVSWGTMIDGCLRKNQLDEALVYYT 294
Query: 93 ------VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS----------- 135
+ P+E + LSA A +G Q+HG ++ G+ F+
Sbjct: 295 EMLRCGMKPSEVMMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSN 354
Query: 136 --------------------NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
N+LI ++K G A V+ + + S+NA+ISG+ +
Sbjct: 355 DIKLALQQFEASVKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQ 414
Query: 176 NHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
+ P+ +F+ M+ V PD + V + ++L G H L P
Sbjct: 415 SLSPQLALHLFREMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAH---DYLNFSTIPP 471
Query: 235 IGNV---IMSMYAQFNFIEEVVRVF---RLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
N+ I+ MYA+ IE + +F + I + WN +I S K L
Sbjct: 472 NDNLTAAIIDMYAKCGSIETALNIFHQTKNISSSTISPWNAIICG-SATHGHAKLALDLY 530
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ--YWDVGVHNALVNMYA 346
+ I+P+ TF +L++C HA + + + ++ D+ + +V++
Sbjct: 531 SDLQSLPIKPNSITFVGVLSACC-HAGLVELGKTYFESMKSDHGIEPDIKHYGCMVDLLG 589
Query: 347 KCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG 380
K G + A ++ KM + +++ W +++A HG
Sbjct: 590 KAGRLEEAKEMIKKMPVKADVMIWGMLLSASRTHG 624
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 112/243 (46%), Gaps = 38/243 (15%)
Query: 1 MMLETIGTLLQRCSKTMTFGLHAAVLKIG------------------------------- 29
MM++ + + + LH ++K G
Sbjct: 307 MMVDLLSASARSVGSSKGLQLHGTIVKRGFDCYDFLQATIIHFYAVSNDIKLALQQFEAS 366
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS 89
++ H+ N L+ +VK G V AR+VFD +++ SW+AMISGY Q +ALHLF
Sbjct: 367 VKDHIASRNALIAGFVKNGMVEQAREVFDQTHDKDIFSWNAMISGYAQSLSPQLALHLFR 426
Query: 90 QM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC 145
+M +V P+ S SA +SL +L +G++ H S ++ ++I MY KC
Sbjct: 427 EMISSSQVKPDAITMVSVFSAISSLGSLEEGKRAHDYLNFSTIPPNDNLTAAIIDMYAKC 486
Query: 146 GQCSDALSVY--ANSVGTNSVS-YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
G AL+++ ++ ++++S +NA+I G + + +++ + P+ +FV
Sbjct: 487 GSIETALNIFHQTKNISSSTISPWNAIICGSATHGHAKLALDLYSDLQSLPIKPNSITFV 546
Query: 203 GLL 205
G+L
Sbjct: 547 GVL 549
>AT4G08210.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:5183813-5185873 REVERSE
LENGTH=686
Length = 686
Score = 266 bits (681), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 164/553 (29%), Positives = 273/553 (49%), Gaps = 38/553 (6%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALH 86
K L+ V + N +++MYVK GR++ A F + ++ SW+ +ISGY + G A+
Sbjct: 135 KENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISGYCKAGLMDEAVT 194
Query: 87 LFSQMK---------------------------------VLPNEFVFASTLSACASLRAL 113
LF +M ++ + F L AC+ L
Sbjct: 195 LFHRMPQPNVVSWNCLISGFVDKGSPRALEFLVRMQREGLVLDGFALPCGLKACSFGGLL 254
Query: 114 VQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN---SVGTNSVSYNALI 170
G+Q+H ++SG S F ++LI MY CG A V+ +V ++ +N+++
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 171 SGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD 230
SGF+ N E E + + Q D ++ G L N + R G+ +H V +
Sbjct: 315 SGFLINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGYE 374
Query: 231 CTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM 290
++G++++ ++A I++ ++F + +KD+I+++ LI +F F+E+
Sbjct: 375 LDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFREL 434
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
+ + + D F ++IL C+ AS GKQIH + + ALV+MY KCG
Sbjct: 435 I-KLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 351 IGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
I +F M R+++SW +I FG +G E A F +M G++P+ VTF GLL A
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGIEPNKVTFLGLLSA 553
Query: 411 CNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPV 470
C HSG++ + +M++ YG+ P + H+ C++D+LG+AG E E INK D
Sbjct: 554 CRHSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPDKT 613
Query: 471 VLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLK 530
+ SLL+AC H N + +A+ LL+ P S Y LSN YA+ GMW++++ R+ K
Sbjct: 614 IWTSLLTACGTHKNAGLVTVIAEKLLKGFPDDPSVYTSLSNAYATLGMWDQLSKVREAAK 673
Query: 531 GSGLRKEPGYAWL 543
G KE G +W+
Sbjct: 674 KLG-AKESGMSWI 685
Score = 168 bits (425), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 143/558 (25%), Positives = 253/558 (45%), Gaps = 77/558 (13%)
Query: 1 MMLETIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKV 56
M L+ I L+ C K F + A V+K G+ +VF++N +++MYV + A KV
Sbjct: 3 MDLKLIAAGLRHCGKVQAFKRGESIQAHVIKQGISQNVFIANNVISMYVDFRLLSDAHKV 62
Query: 57 FDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRA 112
FD MSERN V+W+ M+SGY G+ A+ L+ +M + NEF++++ L AC +
Sbjct: 63 FDEMSERNIVTWTTMVSGYTSDGKPNKAIELYRRMLDSEEEAANEFMYSAVLKACGLVGD 122
Query: 113 LVQG----QQIHGLSLRSGY------------------ASISFVS---------NSLITM 141
+ G ++I +LR A+ SF N+LI+
Sbjct: 123 IQLGILVYERIGKENLRGDVVLMNSVVDMYVKNGRLIEANSSFKEILRPSSTSWNTLISG 182
Query: 142 YMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSF 201
Y K G +A++++ N VS+N LISGFV+ P + E M +EG V D F+
Sbjct: 183 YCKAGLMDEAVTLFHRMPQPNVVSWNCLISGFVDKGSP-RALEFLVRMQREGLVLDGFAL 241
Query: 202 VGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF---RL 258
L + G LHC VK L+ +P + ++ MY+ + VF +L
Sbjct: 242 PCGLKACSFGGLLTMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKL 301
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
+ V WN++++ F +++ ++ L+ + + + D +T + L C + +
Sbjct: 302 AVNSSVAVWNSMLSGF-LINEENEAALWLLLQIYQSDLCFDSYTLSGALKICINYVNLRL 360
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
G Q+H+ + + D V + LV+++A G+I AHK+F ++ +++I+++ +I
Sbjct: 361 GLQVHSLVVVSGYELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVK 420
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN-----------HSGMVRKG------- 420
G A +F ++ G+ D + +L C+ H ++KG
Sbjct: 421 SGFNSLAFYLFRELIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVT 480
Query: 421 -----DLYFNSMEAAYGIA-------PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN- 467
D+Y E G+ ++ ++ +I G+ GR+ E Y +K ++
Sbjct: 481 ATALVDMYVKCGEIDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMINIGI 540
Query: 468 --DPVVLGSLLSACRVHG 483
+ V LLSACR G
Sbjct: 541 EPNKVTFLGLLSACRHSG 558
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 193/411 (46%), Gaps = 14/411 (3%)
Query: 16 TMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVF--DGMSERNTVS-WSAMI 72
TM LH V+K GL+S F + L++MY CG ++ A VF + ++ ++V+ W++M+
Sbjct: 255 TMGKQLHCCVVKSGLESSPFAISALIDMYSNCGSLIYAADVFHQEKLAVNSSVAVWNSML 314
Query: 73 SGY----DQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
SG+ + W+ L ++ Q + + + + L C + L G Q+H L + SGY
Sbjct: 315 SGFLINEENEAALWLLLQIY-QSDLCFDSYTLSGALKICINYVNLRLGLQVHSLVVVSGY 373
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
V + L+ ++ G DA ++ + ++++ LI G V++ F +F+
Sbjct: 374 ELDYIVGSILVDLHANVGNIQDAHKLFHRLPNKDIIAFSGLIRGCVKSGFNSLAFYLFRE 433
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
+++ G D+F +L ++L G +H +K + P+ ++ MY +
Sbjct: 434 LIKLGLDADQFIVSNILKVCSSLASLGWGKQIHGLCIKKGYESEPVTATALVDMYVKCGE 493
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
I+ V +F + ++DV+SW +I F ++F +F +M+N I P+ TF +L+
Sbjct: 494 IDNGVVLFDGMLERDVVSWTGIIVGFGQNGRVEEAFRYFHKMIN-IGIEPNKVTFLGLLS 552
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHN--ALVNMYAKCGSIGYAHKVFSKMSYR-N 365
+C H+ L + ++ + + + +V++ + G A+++ +KM +
Sbjct: 553 ACR-HSGLLEEARSTLETMKSEYGLEPYLEHYYCVVDLLGQAGLFQEANELINKMPLEPD 611
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
W +++ A G H I E++ +G D +T L A GM
Sbjct: 612 KTIWTSLLTACGTHKNAGLVTVIAEKL-LKGFPDDPSVYTSLSNAYATLGM 661
>AT1G31430.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:11254025-11255737 REVERSE
LENGTH=570
Length = 570
Score = 265 bits (678), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 159/493 (32%), Positives = 254/493 (51%), Gaps = 40/493 (8%)
Query: 85 LHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
L LF +++ + P+ F L + LR +++G+++HG ++++G S+VSNSL+ M
Sbjct: 31 LALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAVKAGLEFDSYVSNSLMGM 90
Query: 142 YMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP-DRFS 200
Y G+ V+ + VS+N LIS +V N E VFK M QE + D +
Sbjct: 91 YASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFEDAIGVFKRMSQESNLKFDEGT 150
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
V L + L + G ++ + V + + IGN ++ M+ + +++ VF ++
Sbjct: 151 IVSTLSACSALKNLEIGERIY-RFVVTEFEMSVRIGNALVDMFCKCGCLDKARAVFDSMR 209
Query: 261 DK-------------------------------DVISWNTLINAFSHFDDQGKSFLFFKE 289
DK DV+ W ++N + F+ ++ F+
Sbjct: 210 DKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFR- 268
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
M IRPD+F S+L C + GK IH ++ R D V ALV+MYAKCG
Sbjct: 269 CMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYINENRVTVDKVVGTALVDMYAKCG 328
Query: 350 SIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
I A +VF ++ R+ SW ++I +G+ RA++++ +M+ GV+ D++TF +L
Sbjct: 329 CIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALDLYYEMENVGVRLDAITFVAVLT 388
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDP 469
ACNH G V +G F+SM + + P H SCLID+L RAG L E EE I+K +D
Sbjct: 389 ACNHGGFVAEGRKIFHSMTERHNVQPKSEHCSCLIDLLCRAGLLDEAEELIDKMRGESDE 448
Query: 470 V---VLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSAR 526
V SLLSA R +GN+ I ER+A+ L +V +S + LL+++YAS W +VT+ R
Sbjct: 449 TLVPVYCSLLSAARNYGNVKIAERVAEKLEKVEVSDSSAHTLLASVYASANRWEDVTNVR 508
Query: 527 KMLKGSGLRKEPG 539
+ +K G+RK PG
Sbjct: 509 RKMKDLGIRKFPG 521
Score = 145 bits (365), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 107/417 (25%), Positives = 194/417 (46%), Gaps = 47/417 (11%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H +K GL+ +VSN L+ MY G++ + KVFD M +R+ VSW+ +IS Y G
Sbjct: 68 VHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGR 127
Query: 81 HWMALHLFSQMKVLPN----EFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
A+ +F +M N E STLSAC++L+ L G++I+ + S+ + N
Sbjct: 128 FEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR-IGN 186
Query: 137 SLITMYMKCG-------------------------------QCSDALSVYANSVGTNSVS 165
+L+ M+ KCG + +A ++ S + V
Sbjct: 187 ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVL 246
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+ A+++G+V+ + ++ E+F+ M G PD F V LL G +H
Sbjct: 247 WTAMMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN 306
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFL 285
+ + ++G ++ MYA+ IE + VF I+++D SW +LI + G++
Sbjct: 307 ENRVTVDKVVGTALVDMYAKCGCIETALEVFYEIKERDTASWTSLIYGLAMNGMSGRALD 366
Query: 286 FFKEMMNECSIRPDDFTFASILASCTWHASFL-HGKQIHAFLFRTRQYWDVGVH-NALVN 343
+ EM N +R D TF ++L +C H F+ G++I + H + L++
Sbjct: 367 LYYEMEN-VGVRLDAITFVAVLTACN-HGGFVAEGRKIFHSMTERHNVQPKSEHCSCLID 424
Query: 344 MYAKCGSIGYAHKVFSKM---SYRNLIS-WNTMIAA---FGNHGLGERAIEIFEQMK 393
+ + G + A ++ KM S L+ + ++++A +GN + ER E E+++
Sbjct: 425 LLCRAGLLDEAEELIDKMRGESDETLVPVYCSLLSAARNYGNVKIAERVAEKLEKVE 481
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 144/323 (44%), Gaps = 45/323 (13%)
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
YN ++ + K +F + +G PD F+ +L L G +H AV
Sbjct: 14 YNKMLKSLADGKSFTKVLALFGELRGQGLYPDNFTLPVVLKSIGRLRKVIEGEKVHGYAV 73
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF---SHFDDQGK 282
K L+ + N +M MYA IE +VF + +DV+SWN LI+++ F+D
Sbjct: 74 KAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYVGNGRFED--- 130
Query: 283 SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALV 342
+ FK M E +++ D+ T S L++C+ + G++I+ F+ T V + NALV
Sbjct: 131 AIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVV-TEFEMSVRIGNALV 189
Query: 343 NMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHG-------LGER----------- 384
+M+ KCG + A VF M +N+ W +M+ + + G L ER
Sbjct: 190 DMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFGYVSTGRIDEARVLFERSPVKDVVLWTA 249
Query: 385 -------------AIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDL---YFNSME 428
A+E+F M+ G++PD+ LL C +G + +G Y N E
Sbjct: 250 MMNGYVQFNRFDEALELFRCMQTAGIRPDNFVLVSLLTGCAQTGALEQGKWIHGYIN--E 307
Query: 429 AAYGIAPNIGHFSCLIDMLGRAG 451
+ +G + L+DM + G
Sbjct: 308 NRVTVDKVVG--TALVDMYAKCG 328
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 132/286 (46%), Gaps = 18/286 (6%)
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
L+Q ++ +N ++ + + K F E+ + + PD+FT +L S +
Sbjct: 5 LLQTPSLLMYNKMLKSLADGKSFTKVLALFGELRGQ-GLYPDNFTLPVVLKSIGRLRKVI 63
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
G+++H + + +D V N+L+ MYA G I HKVF +M R+++SWN +I+++
Sbjct: 64 EGEKVHGYAVKAGLEFDSYVSNSLMGMYASLGKIEITHKVFDEMPQRDVVSWNGLISSYV 123
Query: 378 NHGLGERAIEIFEQMKAE-GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
+G E AI +F++M E +K D T L AC+ + G+ + + + ++
Sbjct: 124 GNGRFEDAIGVFKRMSQESNLKFDEGTIVSTLSACSALKNLEIGERIYRFVVTEFEMSVR 183
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLN----DPVVLGSLLSACRVHGNMAIGERLA 492
IG+ L+DM + G L + + N +V G +S R+ A
Sbjct: 184 IGN--ALVDMFCKCGCLDKARAVFDSMRDKNVKCWTSMVFG-YVSTGRIDE--------A 232
Query: 493 KLLLEVPPVTTSP-YVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
++L E PV + + N Y ++E + ++ +G+R +
Sbjct: 233 RVLFERSPVKDVVLWTAMMNGYVQFNRFDEALELFRCMQTAGIRPD 278
>AT1G74630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28030521-28032452 FORWARD
LENGTH=643
Length = 643
Score = 265 bits (676), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 158/548 (28%), Positives = 277/548 (50%), Gaps = 54/548 (9%)
Query: 8 TLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVV-----LARKVFDGMS 61
+LL C +H +K G+ + + + +L+ + C + AR++
Sbjct: 10 SLLNSCKNLRALTQIHGLFIKYGVDTDSYFTGKLI---LHCAISISDALPYARRLLLCFP 66
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQ 117
E + ++ ++ GY + E ++ +F +M V P+ F FA + A + R+L G
Sbjct: 67 EPDAFMFNTLVRGYSESDEPHNSVAVFVEMMRKGFVFPDSFSFAFVIKAVENFRSLRTGF 126
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
Q+H +L+ G S FV +LI MY CG A V+ N V++NA+I+ +
Sbjct: 127 QMHCQALKHGLESHLFVGTTLIGMYGGCGCVEFARKVFDEMHQPNLVAWNAVITACFRGN 186
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
+ E+F ML V + S+ N
Sbjct: 187 DVAGAREIFDKML----VRNHTSW-----------------------------------N 207
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
V+++ Y + +E R+F + +D +SW+T+I +H +SFL+F+E+ +
Sbjct: 208 VMLAGYIKAGELESAKRIFSEMPHRDDVSWSTMIVGIAHNGSFNESFLYFREL-QRAGMS 266
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
P++ + +L++C+ SF GK +H F+ + W V V+NAL++MY++CG++ A V
Sbjct: 267 PNEVSLTGVLSACSQSGSFEFGKILHGFVEKAGYSWIVSVNNALIDMYSRCGNVPMARLV 326
Query: 358 FSKM-SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
F M R ++SW +MIA HG GE A+ +F +M A GV PD ++F LL AC+H+G+
Sbjct: 327 FEGMQEKRCIVSWTSMIAGLAMHGQGEEAVRLFNEMTAYGVTPDGISFISLLHACSHAGL 386
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
+ +G+ YF+ M+ Y I P I H+ C++D+ GR+G+L + ++I + +V +LL
Sbjct: 387 IEEGEDYFSEMKRVYHIEPEIEHYGCMVDLYGRSGKLQKAYDFICQMPIPPTAIVWRTLL 446
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
AC HGN+ + E++ + L E+ P + VLLSN YA+ G W +V S RK + ++K
Sbjct: 447 GACSSHGNIELAEQVKQRLNELDPNNSGDLVLLSNAYATAGKWKDVASIRKSMIVQRIKK 506
Query: 537 EPGYAWLK 544
++ ++
Sbjct: 507 TTAWSLVE 514
>AT4G38010.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr4:17859582-17861261 REVERSE
LENGTH=559
Length = 559
Score = 264 bits (674), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 142/486 (29%), Positives = 253/486 (52%), Gaps = 8/486 (1%)
Query: 64 NTVSWSAMISGYDQCGEHWM---ALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH 120
++ S++ ++S Y C + + A F P+ F F AC + +G+QIH
Sbjct: 70 SSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACGKFSGIREGKQIH 129
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
G+ + G+ +V NSL+ Y CG+ +A V+ + VS+ +I+GF +
Sbjct: 130 GIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGLYK 189
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ + F M E P+ ++V +L S + G +H +K A + GN ++
Sbjct: 190 EALDTFSKMDVE---PNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALI 246
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
MY + + + +RVF ++ KD +SWN++I+ H + ++ F M I+PD
Sbjct: 247 DMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDG 306
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
S+L++C + HG+ +H ++ WD + A+V+MYAKCG I A ++F+
Sbjct: 307 HILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNG 366
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+ +N+ +WN ++ HG G ++ FE+M G KP+ VTF L AC H+G+V +G
Sbjct: 367 IRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFKPNLVTFLAALNACCHTGLVDEG 426
Query: 421 DLYFNSMEA-AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSAC 479
YF+ M++ Y + P + H+ C+ID+L RAG L E E + D + G++LSAC
Sbjct: 427 RRYFHKMKSREYNLFPKLEHYGCMIDLLCRAGLLDEALELVKAMPVKPDVRICGAILSAC 486
Query: 480 RVHGN-MAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEP 538
+ G M + + + L++ + YVLLSN++A++ W++V R+++K G+ K P
Sbjct: 487 KNRGTLMELPKEILDSFLDIEFEDSGVYVLLSNIFAANRRWDDVARIRRLMKVKGISKVP 546
Query: 539 GYAWLK 544
G ++++
Sbjct: 547 GSSYIE 552
Score = 160 bits (404), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 128/465 (27%), Positives = 207/465 (44%), Gaps = 52/465 (11%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V K+G ++V N L++ Y CG A KVF M R+ VSW+ +I+G+ + G
Sbjct: 128 IHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTGIITGFTRTGL 187
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
+ AL FS+M V PN + L + + L G+ IHGL L+ N+LI
Sbjct: 188 YKEALDTFSKMDVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKRASLISLETGNALID 247
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM-LQEGFVPDRF 199
MY+KC Q SDA+ V+ + VS+N++ISG V ++ ++F LM G PD
Sbjct: 248 MYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLFSLMQTSSGIKPDGH 307
Query: 200 SFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLI 259
+L +L G +H + + IG I+ MYA+ +IE + +F I
Sbjct: 308 ILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIGTAIVDMYAKCGYIETALEIFNGI 367
Query: 260 QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHG 319
+ K+V +WN L+ + +S +F+EM+ + +P+ TF + L +C H +
Sbjct: 368 RSKNVFTWNALLGGLAIHGHGLESLRYFEEMV-KLGFKPNLVTFLAALNACC-HTGLVDE 425
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH 379
+ + ++R+Y N++ K L + MI
Sbjct: 426 GRRYFHKMKSREY----------NLFPK------------------LEHYGCMIDLLCRA 457
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK---------GDLYFNSMEAA 430
GL + A+E+ +KA VKPD +L AC + G + + D+ F
Sbjct: 458 GLLDEALEL---VKAMPVKPDVRICGAILSACKNRGTLMELPKEILDSFLDIEFED-SGV 513
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVE--------EYINKFHHLN 467
Y + NI + D + R RL +V+ YI KF L+
Sbjct: 514 YVLLSNIFAANRRWDDVARIRRLMKVKGISKVPGSSYIEKFMTLD 558
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 169/396 (42%), Gaps = 16/396 (4%)
Query: 94 LPNEFVFASTLSACASLRAL--VQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDA 151
LP + V +S C+SLR +Q Q I LR + N ++T K +
Sbjct: 3 LPEKSVLLELISRCSSLRVFKQIQTQLITRDLLRD-----DLIINKVVTFLGKSADFASY 57
Query: 152 LSVYANSVGT--NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
SV +S+ + +S SYN L+S + +P +K + GF PD F+F +
Sbjct: 58 SSVILHSIRSVLSSFSYNTLLSSYAVCDKPRVTIFAYKTFVSNGFSPDMFTFPPVFKACG 117
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
R G +H K+ + N ++ Y +VF + +DV+SW
Sbjct: 118 KFSGIREGKQIHGIVTKMGFYDDIYVQNSLVHFYGVCGESRNACKVFGEMPVRDVVSWTG 177
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
+I F+ ++ F +M + P+ T+ +L S GK IH + +
Sbjct: 178 IITGFTRTGLYKEALDTFSKM----DVEPNLATYVCVLVSSGRVGCLSLGKGIHGLILKR 233
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
+ NAL++MY KC + A +VF ++ ++ +SWN+MI+ + + AI++F
Sbjct: 234 ASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCERSKEAIDLF 293
Query: 390 EQMK-AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
M+ + G+KPD T +L AC G V G + A GI + + ++DM
Sbjct: 294 SLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTA-GIKWDTHIGTAIVDMYA 352
Query: 449 RAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
+ G + E N N +LL +HG+
Sbjct: 353 KCGYIETALEIFNGIRSKN-VFTWNALLGGLAIHGH 387
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 101/190 (53%), Gaps = 4/190 (2%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
G+H +LK + N L++MYVKC ++ A +VF + +++ VSW++MISG C
Sbjct: 225 GIHGLILKRASLISLETGNALIDMYVKCEQLSDAMRVFGELEKKDKVSWNSMISGLVHCE 284
Query: 80 EHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
A+ LFS M+ + P+ + S LSACASL A+ G+ +H L +G + +
Sbjct: 285 RSKEAIDLFSLMQTSSGIKPDGHILTSVLSACASLGAVDHGRWVHEYILTAGIKWDTHIG 344
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+++ MY KCG AL ++ N ++NAL+ G + + F+ M++ GF
Sbjct: 345 TAIVDMYAKCGYIETALEIFNGIRSKNVFTWNALLGGLAIHGHGLESLRYFEEMVKLGFK 404
Query: 196 PDRFSFVGLL 205
P+ +F+ L
Sbjct: 405 PNLVTFLAAL 414
>AT2G02980.1 | Symbols: OTP85 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:868468-870279 FORWARD
LENGTH=603
Length = 603
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 142/438 (32%), Positives = 242/438 (55%), Gaps = 6/438 (1%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSN--SLITMYMKCGQCSDALSVYANSVGT 161
+S C SLR L+Q I +++S +SFV+ + T S A ++
Sbjct: 36 ISKCNSLRELMQ---IQAYAIKSHIEDVSFVAKLINFCTESPTESSMSYARHLFEAMSEP 92
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
+ V +N++ G+ P + F +F +L++G +PD ++F LL G LH
Sbjct: 93 DIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAVAKALEEGRQLH 152
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
C ++KL LD + +++MY + ++ VF I + V+ +N +I ++ +
Sbjct: 153 CLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAMITGYARRNRPN 212
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
++ F+EM + ++P++ T S+L+SC S GK IH + + V V+ AL
Sbjct: 213 EALSLFREMQGK-YLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSFCKYVKVNTAL 271
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
++M+AKCGS+ A +F KM Y++ +W+ MI A+ NHG E+++ +FE+M++E V+PD
Sbjct: 272 IDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFERMRSENVQPDE 331
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
+TF GLL AC+H+G V +G YF+ M + +GI P+I H+ ++D+L RAG L + E+I+
Sbjct: 332 ITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRAGNLEDAYEFID 391
Query: 462 KFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNE 521
K P++ LL+AC H N+ + E++++ + E+ YV+LSNLYA + W
Sbjct: 392 KLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHGGDYVILSNLYARNKKWEY 451
Query: 522 VTSARKMLKGSGLRKEPG 539
V S RK++K K PG
Sbjct: 452 VDSLRKVMKDRKAVKVPG 469
Score = 139 bits (349), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 176/353 (49%), Gaps = 10/353 (2%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACAS 109
AR +F+ MSE + V +++M GY + LF ++ +LP+ + F S L ACA
Sbjct: 82 ARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFPSLLKACAV 141
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
+AL +G+Q+H LS++ G +V +LI MY +C A V+ V V YNA+
Sbjct: 142 AKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEPCVVCYNAM 201
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
I+G+ + P + +F+ M + P+ + + +L L G +H A K +
Sbjct: 202 ITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIHKYAKKHSF 261
Query: 230 DCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKE 289
+ ++ M+A+ +++ V +F ++ KD +W+ +I A+++ KS L F+
Sbjct: 262 CKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAEKSMLMFER 321
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHA-FLFRTRQYWDVGVHNALVNMYAKC 348
M +E +++PD+ TF +L +C+ G++ + + + + + ++V++ ++
Sbjct: 322 MRSE-NVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSMVDLLSRA 380
Query: 349 GSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG---LGERAIE-IFEQMKAEG 396
G++ A++ K+ + W ++AA +H L E+ E IFE + G
Sbjct: 381 GNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHG 433
>AT5G59200.1 | Symbols: OTP80 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:23888793-23890427 REVERSE
LENGTH=544
Length = 544
Score = 263 bits (672), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 145/474 (30%), Positives = 237/474 (50%), Gaps = 36/474 (7%)
Query: 102 STLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT 161
+ +S S + + IH +R+ + +FV LI + A V++
Sbjct: 31 TLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSNP 90
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
N Y A+I GFV + G ++ M+ +PD + +L D + +H
Sbjct: 91 NVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREIH 146
Query: 222 CQAVKLALDCTPLIG-------------------------------NVIMSMYAQFNFIE 250
Q +KL + +G V+++ Y++ FI+
Sbjct: 147 AQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFIK 206
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
E + +F+ ++ KD + W +I+ + K+ F+EM E ++ ++FT +L++C
Sbjct: 207 EALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQME-NVSANEFTAVCVLSAC 265
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+ + G+ +H+F+ R V NAL+NMY++CG I A +VF M +++IS+N
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAA 430
TMI+ HG AI F M G +P+ VT LL AC+H G++ G FNSM+
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKRV 385
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGER 490
+ + P I H+ C++D+LGR GRL E +I D ++LG+LLSAC++HGNM +GE+
Sbjct: 386 FNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGEK 445
Query: 491 LAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+AK L E + YVLLSNLYAS G W E T R+ ++ SG+ KEPG + ++
Sbjct: 446 IAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKEPGCSTIE 499
Score = 125 bits (314), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 198/445 (44%), Gaps = 51/445 (11%)
Query: 4 ETIGTLLQRCSKTMTF-GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
+T+ ++L+ C +HA +++ FV +L+ + V A VF +S
Sbjct: 30 KTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVDYAYDVFSYVSN 89
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQI 119
N ++AMI G+ G + L+ +M VLP+ +V S L AC L ++I
Sbjct: 90 PNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKAC----DLKVCREI 145
Query: 120 HGLSLRSGYASISFV-------------------------------SNSLITMYMKCGQC 148
H L+ G+ S V + +I Y +CG
Sbjct: 146 HAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATVMINCYSECGFI 205
Query: 149 SDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFS 208
+AL ++ + ++V + A+I G V N E K E+F+ M E + F+ V +L
Sbjct: 206 KEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQMENVSANEFTAVCVLSAC 265
Query: 209 TNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWN 268
++L G +H ++ + +GN +++MY++ I E RVFR+++DKDVIS+N
Sbjct: 266 SDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRVMRDKDVISYN 325
Query: 269 TLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
T+I+ + ++ F++M+N RP+ T ++L +C+ G ++ + R
Sbjct: 326 TMISGLAMHGASVEAINEFRDMVNR-GFRPNQVTLVALLNACSHGGLLDIGLEVFNSMKR 384
Query: 329 TRQYW-DVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAA---FGNHGLGE 383
+ + +V++ + G + A++ + + I T+++A GN LGE
Sbjct: 385 VFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIPIEPDHIMLGTLLSACKIHGNMELGE 444
Query: 384 R-AIEIFEQMKAEGVKPDSVTFTGL 407
+ A +FE PDS T+ L
Sbjct: 445 KIAKRLFESE-----NPDSGTYVLL 464
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 163/381 (42%), Gaps = 73/381 (19%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
I ++L+ C + +HA VLK+G S V +++ +Y K G +V A+K+FD M +R+
Sbjct: 129 VITSVLKACDLKVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRD 188
Query: 65 TVSWSAMISGYDQCG-------------------------------EHWMALHLFSQMK- 92
V+ + MI+ Y +CG E AL LF +M+
Sbjct: 189 HVAATVMINCYSECGFIKEALELFQDVKIKDTVCWTAMIDGLVRNKEMNKALELFREMQM 248
Query: 93 --VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
V NEF LSAC+ L AL G+ +H +FV N+LI MY +CG ++
Sbjct: 249 ENVSANEFTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINE 308
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
A V+ + +SYN +ISG + + F+ M+ GF P++ + V LL ++
Sbjct: 309 ARRVFRVMRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSH 368
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVRVFRLIQDKDVISWN 268
G+ + ++K + P I + I+ + + +EE +R I++
Sbjct: 369 GGLLDIGLEVF-NSMKRVFNVEPQIEHYGCIVDLLGRVGRLEE---AYRFIEN------- 417
Query: 269 TLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
I PD ++L++C H + G++I LF
Sbjct: 418 -------------------------IPIEPDHIMLGTLLSACKIHGNMELGEKIAKRLFE 452
Query: 329 TRQYWDVGVHNALVNMYAKCG 349
+ + D G + L N+YA G
Sbjct: 453 S-ENPDSGTYVLLSNLYASSG 472
>AT5G46460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:18840305-18842398 FORWARD
LENGTH=697
Length = 697
Score = 262 bits (669), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 161/515 (31%), Positives = 269/515 (52%), Gaps = 13/515 (2%)
Query: 33 HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK 92
HV + +++ Y + R+V A +FD M R+ VSW++MISG +CG+ A+ LF +M
Sbjct: 65 HVSLYTKMITGYTRSNRLVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM- 123
Query: 93 VLPNEFVFAST--LSACASLRALVQGQQI-HGLSLRSGYASISFVSNSLITMYMKCGQCS 149
P V + T ++ C + Q +++ + + ++ A NS++ Y++ G+
Sbjct: 124 --PERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAW-----NSMVHGYLQFGKVD 176
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
DAL ++ G N +S+ +I G +N + ++FK ML+ F ++
Sbjct: 177 DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTCVITACA 236
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
N F G+ +H +KL + +++ YA I + +VF + V W
Sbjct: 237 NAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTA 296
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
L++ +S + F M+ SI P+ TFAS L SC+ + GK++H +
Sbjct: 297 LLSGYSLNKKHEDALSIFSGMLRN-SILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
D V N+LV MY+ G++ A VF K+ ++++SWN++I HG G+ A IF
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG-IAPNIGHFSCLIDMLG 448
QM +PD +TFTGLL AC+H G + KG F M + I I H++C++D+LG
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 449 RAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVL 508
R G+L E EE I + + +V +LLSACR+H ++ GE+ A + + +++ YVL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 509 LSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
LSN+YAS G W+ V+ R +K +G+ K+PG +W+
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWV 570
Score = 129 bits (325), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 161/348 (46%), Gaps = 37/348 (10%)
Query: 17 MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYD 76
M +H ++K+G +VS L+ Y C R+ +RKVFD W+A++SGY
Sbjct: 243 MGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYS 302
Query: 77 QCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
+H AL +FS M +LPN+ FAS L++C++L L G+++HG++++ G + +F
Sbjct: 303 LNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAF 362
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
V NSL+ MY G +DA+SV+ + VS+N++I G ++ + F +F M++
Sbjct: 363 VGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLN 422
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
PD +F GLL ++ G L M + N I
Sbjct: 423 KEPDEITFTGLLSACSHCGFLEKGRKL------------------FYYMSSGINHI---- 460
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
D+ + + +++ ++ +E++ ++P++ + ++L++C H
Sbjct: 461 -------DRKIQHYTCMVDILGRCGKLKEA----EELIERMVVKPNEMVWLALLSACRMH 509
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
+ G++ A +F + L N+YA G K+ KM
Sbjct: 510 SDVDRGEKAAAAIFNLDSK-SSAAYVLLSNIYASAGRWSNVSKLRVKM 556
>AT1G26900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:9319756-9321474 REVERSE
LENGTH=572
Length = 572
Score = 262 bits (669), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 157/542 (28%), Positives = 283/542 (52%), Gaps = 13/542 (2%)
Query: 10 LQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSW 68
L+ C T+ +H ++K GL F ++LL + + A +F+ +S N +
Sbjct: 35 LRSCRDTVEVSRIHGYMVKTGLDKDDFAVSKLL-AFSSVLDIRYASSIFEHVSNTNLFMF 93
Query: 69 SAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
+ MI GY E A +F+Q++ + + F F +TL +C+ + G+ +HG++LR
Sbjct: 94 NTMIRGYSISDEPERAFSVFNQLRAKGLTLDRFSFITTLKSCSRELCVSIGEGLHGIALR 153
Query: 126 SGYASISFVSNSLITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISGFVENHEPEKGFE 184
SG+ + + N+LI Y CG+ SDA V+ ++V+++ L++G+++ + +
Sbjct: 154 SGFMVFTDLRNALIHFYCVCGKISDARKVFDEMPQSVDAVTFSTLMNGYLQVSKKALALD 213
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYA 244
+F++M + V + + + L ++L D S H +K+ LD + ++ MY
Sbjct: 214 LFRIMRKSEVVVNVSTLLSFLSAISDLGDLSGAESAHVLCIKIGLDLDLHLITALIGMYG 273
Query: 245 QFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFA 304
+ I R+F KDV++WN +I+ ++ + ++M E ++P+ TF
Sbjct: 274 KTGGISSARRIFDCAIRKDVVTWNCMIDQYAKTGLLEECVWLLRQMKYE-KMKPNSSTFV 332
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR 364
+L+SC + + G+ + L R D + ALV+MYAK G + A ++F++M +
Sbjct: 333 GLLSSCAYSEAAFVGRTVADLLEEERIALDAILGTALVDMYAKVGLLEKAVEIFNRMKDK 392
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEG--VKPDSVTFTGLLIACNHSGMVRKGDL 422
++ SW MI+ +G HGL A+ +F +M+ E V+P+ +TF +L AC+H G+V +G
Sbjct: 393 DVKSWTAMISGYGAHGLAREAVTLFNKMEEENCKVRPNEITFLVVLNACSHGGLVMEGIR 452
Query: 423 YFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVH 482
F M AY P + H+ C++D+LGRAG+L E E I +D +LL+ACRV+
Sbjct: 453 CFKRMVEAYSFTPKVEHYGCVVDLLGRAGQLEEAYELIRNLPITSDSTAWRALLAACRVY 512
Query: 483 GNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAW 542
GN +GE + L E+ + +LL+ +A G E + ++ KG RKE GY+
Sbjct: 513 GNADLGESVMMRLAEMGETHPADAILLAGTHAVAGN-PEKSLDNELNKG---RKEAGYSA 568
Query: 543 LK 544
++
Sbjct: 569 IE 570
>AT1G56690.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:21253817-21255931 FORWARD
LENGTH=704
Length = 704
Score = 259 bits (663), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/517 (30%), Positives = 271/517 (52%), Gaps = 20/517 (3%)
Query: 31 QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQ 90
+ +V N L++ Y+K +V AR VF+ M ERN VSW+AM+ GY Q G A LF +
Sbjct: 76 ERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWR 135
Query: 91 MKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
M NE + + + ++++ + + S ++I + G+ +
Sbjct: 136 MPE-RNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKDVVA----STNMIGGLCREGRVDE 190
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVG--LLGFS 208
A ++ N V++ +I+G+ +N+ + ++F++M ++ V +G L G
Sbjct: 191 ARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRI 250
Query: 209 TNLDDFRTGMSLHCQAVKLALDCTPLIG-NVIMSMYAQFNFIEEVVRVFRLIQDKDVISW 267
+ ++F M + P+I N ++ + + I + RVF L++D+D +W
Sbjct: 251 EDAEEFFEVMPMK-----------PVIACNAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 268 NTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF 327
+I A+ + ++ F +M + +RP + SIL+ C AS +G+Q+HA L
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQ-GVRPSFPSLISILSVCATLASLQYGRQVHAHLV 358
Query: 328 RTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIE 387
R + DV V + L+ MY KCG + A VF + S +++I WN++I+ + +HGLGE A++
Sbjct: 359 RCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALK 418
Query: 388 IFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDML 447
IF +M + G P+ VT +L AC+++G + +G F SME+ + + P + H+SC +DML
Sbjct: 419 IFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDML 478
Query: 448 GRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYV 507
GRAG++ + E I D V G+LL AC+ H + + E AK L E P YV
Sbjct: 479 GRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYV 538
Query: 508 LLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
LLS++ AS W +V RK ++ + + K PG +W++
Sbjct: 539 LLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIE 575
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/412 (22%), Positives = 168/412 (40%), Gaps = 75/412 (18%)
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM------ 189
NS+++ Y G +A ++ N VS+N L+SG+++N + VF+LM
Sbjct: 52 NSIVSGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKNRMIVEARNVFELMPERNVV 111
Query: 190 ---------LQEGFV----------PDRFSFVGLLGFSTNLDDFRTGMSLHC---QAVKL 227
+QEG V P+R + F +DD R + VK
Sbjct: 112 SWTAMVKGYMQEGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRIDKARKLYDMMPVKD 171
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
+ T +IG + + ++E +F +++++V++W T+I + + + F
Sbjct: 172 VVASTNMIGGL-----CREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLF 226
Query: 288 KEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAK 347
+ M + + ++ S+L T ++ F V NA++ + +
Sbjct: 227 EVMPEKTEV-----SWTSMLLGYTLSGRIEDAEE----FFEVMPMKPVIACNAMIVGFGE 277
Query: 348 CGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGL 407
G I A +VF M R+ +W MI A+ G A+++F QM+ +GV+P + +
Sbjct: 278 VGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISI 337
Query: 408 LIACN-----------HSGMVR---KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
L C H+ +VR D+Y S+ L+ M + G L
Sbjct: 338 LSVCATLASLQYGRQVHAHLVRCQFDDDVYVASV---------------LMTMYVKCGEL 382
Query: 454 SEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSP 505
+ + ++F D ++ S++S HG +GE K+ E+P T P
Sbjct: 383 VKAKLVFDRFSS-KDIIMWNSIISGYASHG---LGEEALKIFHEMPSSGTMP 430
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 7/156 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +++ V+V++ L+ MYVKCG +V A+ VFD S ++ + W+++ISGY G
Sbjct: 353 VHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGL 412
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL +F +M +PN+ + L+AC+ L +G +I S+ S + V +
Sbjct: 413 GEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFE-SMESKFCVTPTVEHY 471
Query: 138 LITMYM--KCGQCSDALS-VYANSVGTNSVSYNALI 170
T+ M + GQ A+ + + ++ ++ + AL+
Sbjct: 472 SCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALL 507
>AT3G14330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:4779688-4782451 REVERSE
LENGTH=710
Length = 710
Score = 259 bits (663), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 144/453 (31%), Positives = 243/453 (53%), Gaps = 13/453 (2%)
Query: 100 FASTLSACASLRALVQGQQIHGL-----SLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
+ L AC S ++L G +I L SLR +S LIT++ C + A +
Sbjct: 134 YTDLLHACISAKSLHHGIKICSLILNNPSLRHNPKLLS----KLITLFSVCRRLDLARKI 189
Query: 155 YANSVGTNSVS---YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
+ + ++ ++ + A+ G+ N P V+ ML P FS L +L
Sbjct: 190 FDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCSFIEPGNFSISVALKACVDL 249
Query: 212 DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
D R G +H Q VK ++ NV++ +Y + ++ +VF + +++V++WN+LI
Sbjct: 250 KDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLI 309
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
+ S + F F++M E I T +IL +C+ A+ L GK+IHA + ++++
Sbjct: 310 SVLSKKVRVHEMFNLFRKMQEEM-IGFSWATLTTILPACSRVAALLTGKEIHAQILKSKE 368
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQ 391
DV + N+L++MY KCG + Y+ +VF M ++L SWN M+ + +G E I +FE
Sbjct: 369 KPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEW 428
Query: 392 MKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
M GV PD +TF LL C+ +G+ G F M+ + ++P + H++CL+D+LGRAG
Sbjct: 429 MIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFRVSPALEHYACLVDILGRAG 488
Query: 452 RLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSN 511
++ E + I + GSLL++CR+HGN+++GE AK L + P YV++SN
Sbjct: 489 KIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEPHNPGNYVMVSN 548
Query: 512 LYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+YA MW+ V R+M+K G++KE G +W++
Sbjct: 549 IYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQ 581
Score = 121 bits (303), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 171/364 (46%), Gaps = 13/364 (3%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVS---WSAMISGYDQCGEHWMALHLFSQMK-- 92
++L+ ++ C R+ LARK+FD +++ + ++ W+AM GY + G AL ++ M
Sbjct: 171 SKLITLFSVCRRLDLARKIFDDVTDSSLLTEKVWAAMAIGYSRNGSPRDALIVYVDMLCS 230
Query: 93 -VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDA 151
+ P F + L AC L+ L G+ IH ++ V N L+ +YM+ G DA
Sbjct: 231 FIEPGNFSISVALKACVDLKDLRVGRGIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDA 290
Query: 152 LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
V+ N V++N+LIS + + F +F+ M +E + +L + +
Sbjct: 291 RKVFDGMSERNVVTWNSLISVLSKKVRVHEMFNLFRKMQEEMIGFSWATLTTILPACSRV 350
Query: 212 DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
TG +H Q +K + N +M MY + +E RVF ++ KD+ SWN ++
Sbjct: 351 AALLTGKEIHAQILKSKEKPDVPLLNSLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIML 410
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
N ++ + + + E M E + PD TF ++L+ C+ +G + + +
Sbjct: 411 NCYA-INGNIEEVINLFEWMIESGVAPDGITFVALLSGCSDTGLTEYGLSLFERMKTEFR 469
Query: 332 YWDVGVHNA-LVNMYAKCGSIGYAHKVFSKMSYRNLIS-WNTMIAA---FGNHGLGE-RA 385
H A LV++ + G I A KV M ++ S W +++ + GN +GE A
Sbjct: 470 VSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAA 529
Query: 386 IEIF 389
E+F
Sbjct: 530 KELF 533
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 136/260 (52%), Gaps = 7/260 (2%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
G+HA ++K + V N LL +Y++ G ARKVFDGMSERN V+W+++IS +
Sbjct: 257 GIHAQIVKRKEKVDQVVYNVLLKLYMESGLFDDARKVFDGMSERNVVTWNSLISVLSKKV 316
Query: 80 EHWMALHLFSQMKVLPNEFVFA---STLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+LF +M+ F +A + L AC+ + AL+ G++IH L+S + N
Sbjct: 317 RVHEMFNLFRKMQEEMIGFSWATLTTILPACSRVAALLTGKEIHAQILKSKEKPDVPLLN 376
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
SL+ MY KCG+ + V+ + + S+N +++ + N E+ +F+ M++ G P
Sbjct: 377 SLMDMYGKCGEVEYSRRVFDVMLTKDLASWNIMLNCYAINGNIEEVINLFEWMIESGVAP 436
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVR 254
D +FV LL ++ G+SL + +K +P + + ++ + + I+E V+
Sbjct: 437 DGITFVALLSGCSDTGLTEYGLSLF-ERMKTEFRVSPALEHYACLVDILGRAGKIKEAVK 495
Query: 255 VFRLIQDKDVIS-WNTLINA 273
V + K S W +L+N+
Sbjct: 496 VIETMPFKPSASIWGSLLNS 515
>AT5G08490.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:2745208-2747757 REVERSE
LENGTH=849
Length = 849
Score = 258 bits (658), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 154/554 (27%), Positives = 275/554 (49%), Gaps = 40/554 (7%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS 89
LQ+HVFV N L++ Y++ GR+ A +F M ++ VSW+ +I+GY E + A LF
Sbjct: 259 LQTHVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFH 318
Query: 90 QM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA-SISFVSNSLITMYMK 144
+ V P+ S L CA L L G++IH LR Y + V N+LI+ Y +
Sbjct: 319 NLVHKGDVSPDSVTIISILPVCAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYAR 378
Query: 145 CGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGL 204
G S A ++ + +S+NA++ F ++ + + + +L E D + + L
Sbjct: 379 FGDTSAAYWAFSLMSTKDIISWNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSL 438
Query: 205 LGFSTNLDDFRTGMSLHCQAVKLAL---DCTPLIGNVIMSMYAQFNFIEEVVRVFR-LIQ 260
L F N+ +H +VK L + P +GN ++ YA+ +E ++F L +
Sbjct: 439 LKFCINVQGIGKVKEVHGYSVKAGLLHDEEEPKLGNALLDAYAKCGNVEYAHKIFLGLSE 498
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMM--------------------NEC------ 294
+ ++S+N+L++ + + + + F EM NE
Sbjct: 499 RRTLVSYNSLLSGYVNSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFRE 558
Query: 295 ----SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
+RP+ T ++L C AS +Q H ++ R D+ + L+++YAKCGS
Sbjct: 559 IQARGMRPNTVTIMNLLPVCAQLASLHLVRQCHGYIIRG-GLGDIRLKGTLLDVYAKCGS 617
Query: 351 IGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
+ +A+ VF + R+L+ + M+A + HG G+ A+ I+ M +KPD V T +L A
Sbjct: 618 LKHAYSVFQSDARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTA 677
Query: 411 CNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPV 470
C H+G+++ G ++S+ +G+ P + ++C +D++ R GRL + ++ + +
Sbjct: 678 CCHAGLIQDGLQIYDSIRTVHGMKPTMEQYACAVDLIARGGRLDDAYSFVTQMPVEPNAN 737
Query: 471 VLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLK 530
+ G+LL AC + M +G +A LL+ T +VL+SN+YA+D W V R ++K
Sbjct: 738 IWGTLLRACTTYNRMDLGHSVANHLLQAESDDTGNHVLISNMYAADAKWEGVMELRNLMK 797
Query: 531 GSGLRKEPGYAWLK 544
++K G +WL+
Sbjct: 798 KKEMKKPAGCSWLE 811
Score = 194 bits (494), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 149/532 (28%), Positives = 253/532 (47%), Gaps = 24/532 (4%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYD-QC 78
LH V K+G + VS +LNMY KC R+ +K+F M + V W+ +++G C
Sbjct: 42 ALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLSVSC 101
Query: 79 GEHWM----ALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
G M A+H + K P+ FA L C L G+ +H +++G + V
Sbjct: 102 GRETMRFFKAMHFADEPK--PSSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLV 159
Query: 135 SNSLITMYMKCGQC-SDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
N+L++MY K G DA + + + VS+NA+I+GF EN+ F F LML+E
Sbjct: 160 GNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEP 219
Query: 194 FVPDRFSFVGLLGFSTNLDD---FRTGMSLHCQAVKLA-LDCTPLIGNVIMSMYAQFNFI 249
P+ + +L ++D R+G +H V+ + L + N ++S Y + I
Sbjct: 220 TEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQTHVFVCNSLVSFYLRVGRI 279
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
EE +F + KD++SWN +I ++ + K+F F ++++ + PD T SIL
Sbjct: 280 EEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNLVHKGDVSPDSVTIISILPV 339
Query: 310 CTWHASFLHGKQIHAFLFR-TRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
C GK+IH+++ R + D V NAL++ YA+ G A+ FS MS +++IS
Sbjct: 340 CAQLTDLASGKEIHSYILRHSYLLEDTSVGNALISFYARFGDTSAAYWAFSLMSTKDIIS 399
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC-NHSGMVRKGDLYFNSM 427
WN ++ AF + + + + + E + DSVT LL C N G+ + +++ S+
Sbjct: 400 WNAILDAFADSPKQFQFLNLLHHLLNEAITLDSVTILSLLKFCINVQGIGKVKEVHGYSV 459
Query: 428 EAAY---GIAPNIGHFSCLIDMLGRAGRLSEVEEYINK-FHHLNDPVVLGSLLSACRVHG 483
+A P +G+ L+D + G + EY +K F L++ L S S +
Sbjct: 460 KAGLLHDEEEPKLGN--ALLDAYAKCGNV----EYAHKIFLGLSERRTLVSYNSLLSGYV 513
Query: 484 NMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR 535
N + L E+ + + L+ +YA NE + ++ G+R
Sbjct: 514 NSGSHDDAQMLFTEMSTTDLTTWSLMVRIYAESCCPNEAIGVFREIQARGMR 565
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 101/320 (31%), Positives = 164/320 (51%), Gaps = 9/320 (2%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
VF + ACAS+ L G+ +HG + G+ + S VS S++ MY KC + D ++
Sbjct: 23 VFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKSVLNMYAKCRRMDDCQKMFRQM 82
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLM-LQEGFVPDRFSFVGLLGFSTNLDDFRTG 217
+ V +N +++G + E FK M + P +F +L L D G
Sbjct: 83 DSLDPVVWNIVLTGLSVSCGRET-MRFFKAMHFADEPKPSSVTFAIVLPLCVRLGDSYNG 141
Query: 218 MSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI-EEVVRVFRLIQDKDVISWNTLINAFSH 276
S+H +K L+ L+GN ++SMYA+F FI + F I DKDV+SWN +I FS
Sbjct: 142 KSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTAFDGIADKDVVSWNAIIAGFSE 201
Query: 277 FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT---WHASFLHGKQIHAFLF-RTRQY 332
+ +F F M+ E P+ T A++L C + + G+QIH+++ R+
Sbjct: 202 NNMMADAFRSFCLMLKE-PTEPNYATIANVLPVCASMDKNIACRSGRQIHSYVVQRSWLQ 260
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
V V N+LV+ Y + G I A +F++M ++L+SWN +IA + ++ +A ++F +
Sbjct: 261 THVFVCNSLVSFYLRVGRIEEAASLFTRMGSKDLVSWNVVIAGYASNCEWFKAFQLFHNL 320
Query: 393 KAEG-VKPDSVTFTGLLIAC 411
+G V PDSVT +L C
Sbjct: 321 VHKGDVSPDSVTIISILPVC 340
Score = 96.3 bits (238), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 110/234 (47%), Gaps = 3/234 (1%)
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
P + F V L GF D F+ ++ ++ D +G +LH KL +
Sbjct: 3 PLRQF-VQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSKS 61
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
+++MYA+ +++ ++FR + D + WN ++ S ++ FFK M +P
Sbjct: 62 VLNMYAKCRRMDDCQKMFRQMDSLDPVVWNIVLTGLS-VSCGRETMRFFKAMHFADEPKP 120
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI-GYAHKV 357
TFA +L C +GK +H+++ + D V NALV+MYAK G I A+
Sbjct: 121 SSVTFAIVLPLCVRLGDSYNGKSMHSYIIKAGLEKDTLVGNALVSMYAKFGFIFPDAYTA 180
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
F ++ ++++SWN +IA F + + A F M E +P+ T +L C
Sbjct: 181 FDGIADKDVVSWNAIIAGFSENNMMADAFRSFCLMLKEPTEPNYATIANVLPVC 234
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI LL C++ + L H +++ GL + + LL++Y KCG + A VF
Sbjct: 570 TIMNLLPVCAQLASLHLVRQCHGYIIRGGL-GDIRLKGTLLDVYAKCGSLKHAYSVFQSD 628
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQ 117
+ R+ V ++AM++GY G AL ++S M + P+ + L+AC + G
Sbjct: 629 ARRDLVMFTAMVAGYAVHGRGKEALMIYSHMTESNIKPDHVFITTMLTACCHAGLIQDGL 688
Query: 118 QIHGLSLRS 126
QI+ S+R+
Sbjct: 689 QIYD-SIRT 696
>AT1G77010.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28942710-28944797 FORWARD
LENGTH=695
Length = 695
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 152/567 (26%), Positives = 277/567 (48%), Gaps = 64/567 (11%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNE 97
N +++ + K G + +AR++F+ M E++ V+ ++++ GY G AL LF ++ +
Sbjct: 128 NVVVSGFAKAGELSVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKELNFSADA 187
Query: 98 FVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ---------- 147
+ L ACA L AL G+QIH L G S +++SL+ +Y KCG
Sbjct: 188 ITLTTVLKACAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQ 247
Query: 148 --------CSDALSVYANSVGTNS-------------VSYNALISGFVENHEPEKGFEVF 186
S +S YAN N + +N++ISG++ N+ + +F
Sbjct: 248 IREPDDHSLSALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLF 307
Query: 187 KLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ- 245
M E D + ++ L TG +HC A K L ++ + ++ MY++
Sbjct: 308 NEMRNET-REDSRTLAAVINACIGLGFLETGKQMHCHACKFGLIDDIVVASTLLDMYSKC 366
Query: 246 ------------------------------FNFIEEVVRVFRLIQDKDVISWNTLINAFS 275
I++ RVF I++K +ISWN++ N FS
Sbjct: 367 GSPMEACKLFSEVESYDTILLNSMIKVYFSCGRIDDAKRVFERIENKSLISWNSMTNGFS 426
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
++ +F + M++ + D+ + +S++++C +S G+Q+ A D
Sbjct: 427 QNGCTVETLEYFHQ-MHKLDLPTDEVSLSSVISACASISSLELGEQVFARATIVGLDSDQ 485
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
V ++L+++Y KCG + + +VF M + + WN+MI+ + +G G AI++F++M
Sbjct: 486 VVSSSLIDLYCKCGFVEHGRRVFDTMVKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVA 545
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
G++P +TF +L ACN+ G+V +G F SM+ +G P+ HFSC++D+L RAG + E
Sbjct: 546 GIRPTQITFMVVLTACNYCGLVEEGRKLFESMKVDHGFVPDKEHFSCMVDLLARAGYVEE 605
Query: 456 VEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYAS 515
+ + D + S+L C +G A+G++ A+ ++E+ P + YV LS ++A+
Sbjct: 606 AINLVEEMPFDVDGSMWSSILRGCVANGYKAMGKKAAEKIIELEPENSVAYVQLSAIFAT 665
Query: 516 DGMWNEVTSARKMLKGSGLRKEPGYAW 542
G W RK+++ + + K PG +W
Sbjct: 666 SGDWESSALVRKLMRENNVTKNPGSSW 692
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 108/464 (23%), Positives = 196/464 (42%), Gaps = 97/464 (20%)
Query: 71 MISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY-A 129
MI Y+ +++ M+V + + L +C+S +Q +GL L+ G+ +
Sbjct: 1 MILKYNSSYRFYLSSSFLQAMEVDCRRY-YVRLLQSCSSRNRETLWRQTNGLLLKKGFLS 59
Query: 130 SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
SI V+N L+ MY + G+ A +++ N S+N +I G++ + E F +M
Sbjct: 60 SIVIVANHLLQMYSRSGKMGIARNLFDEMPDRNYFSWNTMIEGYMNSGEKGTSLRFFDMM 119
Query: 190 LQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
P+R G+S NV++S +A+ +
Sbjct: 120 ------PERD------GYS---------------------------WNVVVSGFAKAGEL 140
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
R+F + +KDV++ N+L++ + ++ FKE+ + D T ++L +
Sbjct: 141 SVARRLFNAMPEKDVVTLNSLLHGYILNGYAEEALRLFKEL----NFSADAITLTTVLKA 196
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI------------------ 351
C + GKQIHA + D ++++LVN+YAKCG +
Sbjct: 197 CAELEALKCGKQIHAQILIGGVECDSKMNSSLVNVYAKCGDLRMASYMLEQIREPDDHSL 256
Query: 352 -----GYAH--------KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
GYA+ +F + S R +I WN+MI+ + + + A+ +F +M+ E +
Sbjct: 257 SALISGYANCGRVNESRGLFDRKSNRCVILWNSMISGYIANNMKMEALVLFNEMRNE-TR 315
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR------ 452
DS T ++ AC G + G + +G+ +I S L+DM + G
Sbjct: 316 EDSRTLAAVINACIGLGFLETGK-QMHCHACKFGLIDDIVVASTLLDMYSKCGSPMEACK 374
Query: 453 -LSEVEEYINKFHHLNDPVVLGSLL----SACRVHGNMAIGERL 491
SEVE Y D ++L S++ S R+ + ER+
Sbjct: 375 LFSEVESY--------DTILLNSMIKVYFSCGRIDDAKRVFERI 410
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLK----IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
++ +++ C+ + L V +GL S VS+ L+++Y KCG V R+VFD M
Sbjct: 452 SLSSVISACASISSLELGEQVFARATIVGLDSDQVVSSSLIDLYCKCGFVEHGRRVFDTM 511
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQ 117
+ + V W++MISGY G+ + A+ LF +M V P + F L+AC + +G+
Sbjct: 512 VKSDEVPWNSMISGYATNGQGFEAIDLFKKMSVAGIRPTQITFMVVLTACNYCGLVEEGR 571
Query: 118 QI 119
++
Sbjct: 572 KL 573
>AT3G15930.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:5387444-5389690 FORWARD
LENGTH=687
Length = 687
Score = 256 bits (654), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 162/575 (28%), Positives = 278/575 (48%), Gaps = 39/575 (6%)
Query: 8 TLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVK--CGRVVLARKVFDGMSERN 64
++L C T F LH+ + G+ + +L + G V A K+F + E +
Sbjct: 39 SILGVCKTTDQFKQLHSQSITRGVAPNPTFQKKLFVFWCSRLGGHVSYAYKLFVKIPEPD 98
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLR-ALVQGQQIH 120
V W+ MI G+ + + L+ M V P+ F L+ AL G+++H
Sbjct: 99 VVVWNNMIKGWSKVDCDGEGVRLYLNMLKEGVTPDSHTFPFLLNGLKRDGGALACGKKLH 158
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
++ G S +V N+L+ MY CG A V+ + S+N +ISG+ E E
Sbjct: 159 CHVVKFGLGSNLYVQNALVKMYSLCGLMDMARGVFDRRCKEDVFSWNLMISGYNRMKEYE 218
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ E+ M + P + + +L + + D +H + + + + N ++
Sbjct: 219 ESIELLVEMERNLVSPTSVTLLLVLSACSKVKDKDLCKRVHEYVSECKTEPSLRLENALV 278
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF----------SHFDDQ---------- 280
+ YA ++ VR+FR ++ +DVISW +++ + ++FD
Sbjct: 279 NAYAACGEMDIAVRIFRSMKARDVISWTSIVKGYVERGNLKLARTYFDQMPVRDRISWTI 338
Query: 281 -----------GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
+S F+EM + I PD+FT S+L +C S G+ I ++ +
Sbjct: 339 MIDGYLRAGCFNESLEIFREMQSAGMI-PDEFTMVSVLTACAHLGSLEIGEWIKTYIDKN 397
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
+ DV V NAL++MY KCG A KVF M R+ +W M+ N+G G+ AI++F
Sbjct: 398 KIKNDVVVGNALIDMYFKCGCSEKAQKVFHDMDQRDKFTWTAMVVGLANNGQGQEAIKVF 457
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGR 449
QM+ ++PD +T+ G+L ACNHSGMV + +F M + + I P++ H+ C++DMLGR
Sbjct: 458 FQMQDMSIQPDDITYLGVLSACNHSGMVDQARKFFAKMRSDHRIEPSLVHYGCMVDMLGR 517
Query: 450 AGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLL 509
AG + E E + K + +V G+LL A R+H + + E AK +LE+ P + Y LL
Sbjct: 518 AGLVKEAYEILRKMPMNPNSIVWGALLGASRLHNDEPMAELAAKKILELEPDNGAVYALL 577
Query: 510 SNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
N+YA W ++ R+ + ++K PG++ ++
Sbjct: 578 CNIYAGCKRWKDLREVRRKIVDVAIKKTPGFSLIE 612
>AT4G16835.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9472763-9474803 FORWARD
LENGTH=656
Length = 656
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 153/515 (29%), Positives = 258/515 (50%), Gaps = 45/515 (8%)
Query: 31 QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALH-LFS 89
Q +F N+++ V+ G + A +VF GM +NT++W++++ G + M H LF
Sbjct: 58 QDQIFPLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFD 117
Query: 90 QMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCS 149
++ P+ F + LS + Q AS N++IT Y + G+
Sbjct: 118 EIPE-PDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASW----NTMITGYARRGEME 172
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
A ++ + + N VS+NA+ISG++E + EK FK+ G V G +
Sbjct: 173 KARELFYSMMEKNEVSWNAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYM---- 228
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
+A K+ L A+ F + V +K++++WN
Sbjct: 229 -------------KAKKVEL--------------AEAMFKDMTV-------NKNLVTWNA 254
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
+I+ + F+ M+ E IRP+ +S L C+ ++ G+QIH + ++
Sbjct: 255 MISGYVENSRPEDGLKLFRAMLEE-GIRPNSSGLSSALLGCSELSALQLGRQIHQIVSKS 313
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
DV +L++MY KCG +G A K+F M +++++WN MI+ + HG ++A+ +F
Sbjct: 314 TLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCLF 373
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGR 449
+M ++PD +TF +L+ACNH+G+V G YF SM Y + P H++C++D+LGR
Sbjct: 374 REMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLGR 433
Query: 450 AGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLL 509
AG+L E + I V G+LL ACRVH N+ + E A+ LL++ + YV L
Sbjct: 434 AGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQL 493
Query: 510 SNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+N+YAS W +V RK +K S + K PGY+W++
Sbjct: 494 ANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIE 528
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H V K L + V L++MY KCG + A K+F+ M +++ V+W+AMISGY Q G
Sbjct: 306 IHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGN 365
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSAC 107
AL LF +M K+ P+ F + L AC
Sbjct: 366 ADKALCLFREMIDNKIRPDWITFVAVLLAC 395
>AT2G37310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15665102-15667075 REVERSE
LENGTH=657
Length = 657
Score = 254 bits (648), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 162/570 (28%), Positives = 275/570 (48%), Gaps = 49/570 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LHA ++ ++ F++++L++ Y + R A VFD ++ RN S++A++ Y
Sbjct: 44 LHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSREM 103
Query: 81 HWMALHLF---------SQMKVLPNEFVFA---STLSACASLRALVQGQQIHGLSLRSGY 128
++ A LF S P+ + LS C +Q+HG +R G+
Sbjct: 104 YFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRGGF 163
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
S FV N +IT Y KC A V+ + VS+N++ISG+ ++ E +++K
Sbjct: 164 DSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMYKA 223
Query: 189 MLQ-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK--LALD---CTPLIG------ 236
ML F P+ + + + D G+ +H + ++ + +D C +IG
Sbjct: 224 MLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENHIQMDLSLCNAVIGFYAKCG 283
Query: 237 --------------------NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH 276
I+S Y ++E + +F ++ + +WN +I+
Sbjct: 284 SLDYARALFDEMSEKDSVTYGAIISGYMAHGLVKEAMALFSEMESIGLSTWNAMISGLMQ 343
Query: 277 FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
+ + F+EM+ C RP+ T +S+L S T+ ++ GK+IHAF R ++
Sbjct: 344 NNHHEEVINSFREMI-RCGSRPNTVTLSSLLPSLTYSSNLKGGKEIHAFAIRNGADNNIY 402
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
V ++++ YAK G + A +VF R+LI+W +I A+ HG + A +F+QM+ G
Sbjct: 403 VTTSIIDNYAKLGFLLGAQRVFDNCKDRSLIAWTAIITAYAVHGDSDSACSLFDQMQCLG 462
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
KPD VT T +L A HSG F+SM Y I P + H++C++ +L RAG+LS+
Sbjct: 463 TKPDDVTLTAVLSAFAHSGDSDMAQHIFDSMLTKYDIEPGVEHYACMVSVLSRAGKLSDA 522
Query: 457 EEYINKFHHLNDPV--VLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYA 514
E+I+K DP+ V G+LL+ V G++ I L E+ P T Y +++NLY
Sbjct: 523 MEFISKMPI--DPIAKVWGALLNGASVLGDLEIARFACDRLFEMEPENTGNYTIMANLYT 580
Query: 515 SDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
G W E R +K GL+K PG +W++
Sbjct: 581 QAGRWEEAEMVRNKMKRIGLKKIPGTSWIE 610
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 151/323 (46%), Gaps = 15/323 (4%)
Query: 218 MSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF 277
+ LH + V ++ + + ++S Y + + + + VF I ++ S+N L+ A++
Sbjct: 42 LQLHARIVVFSIKPDNFLASKLISFYTRQDRFRQALHVFDEITVRNAFSYNALLIAYTSR 101
Query: 278 DDQGKSF-LFFKEMMNEC----SIRPDDFTFASILASCTWHASFLHG---KQIHAFLFRT 329
+ +F LF + + C + RPD + + +L + + F G +Q+H F+ R
Sbjct: 102 EMYFDAFSLFLSWIGSSCYSSDAARPDSISISCVLKALSGCDDFWLGSLARQVHGFVIRG 161
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIF 389
DV V N ++ Y KC +I A KVF +MS R+++SWN+MI+ + G E +++
Sbjct: 162 GFDSDVFVGNGMITYYTKCDNIESARKVFDEMSERDVVSWNSMISGYSQSGSFEDCKKMY 221
Query: 390 EQMKA-EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
+ M A KP+ VT + AC S + G M + I ++ + +I
Sbjct: 222 KAMLACSDFKPNGVTVISVFQACGQSSDLIFGLEVHKKMIENH-IQMDLSLCNAVIGFYA 280
Query: 449 RAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPY-V 507
+ G L ++ D V G+++S HG + E +A L E+ + S +
Sbjct: 281 KCGSLDYARALFDEMSE-KDSVTYGAIISGYMAHG--LVKEAMA-LFSEMESIGLSTWNA 336
Query: 508 LLSNLYASDGMWNEVTSARKMLK 530
++S L ++ + S R+M++
Sbjct: 337 MISGLMQNNHHEEVINSFREMIR 359
>AT3G18840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:6496198-6498234 FORWARD
LENGTH=678
Length = 678
Score = 253 bits (646), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 165/626 (26%), Positives = 277/626 (44%), Gaps = 105/626 (16%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY------ 75
H +K G SNQL+N+Y K G + AR VFD M ERN SW+A+I+ Y
Sbjct: 11 HIRSIKSGSTLTAVSSNQLVNLYSKSGLLREARNVFDEMLERNVYSWNAVIAAYVKFNNV 70
Query: 76 ---------DQC------------------GEHWMALHLFSQM------KVLPNEFVFAS 102
D C G A+ +F +M + ++F +
Sbjct: 71 KEARELFESDNCERDLITYNTLLSGFAKTDGCESEAIEMFGEMHRKEKDDIWIDDFTVTT 130
Query: 103 TLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV-------Y 155
+ A L + G+Q+HG+ +++G F +SLI MY KCG+ + ++ +
Sbjct: 131 MVKLSAKLTNVFYGEQLHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEF 190
Query: 156 ANSVGTN---------------------------SVSYNALISGFVENHEPEKGFEVFKL 188
+SV N ++S+N LI+G+ +N E+ ++
Sbjct: 191 VDSVARNAMIAAYCREGDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVS 250
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ--- 245
M + G D SF +L ++L + G +H + +K + + I+ +Y +
Sbjct: 251 MEENGLKWDEHSFGAVLNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGN 310
Query: 246 FNFIE----------------------------EVVRVFRLIQDKDVISWNTLINAFSHF 277
+ E E R+F + +K+++ W + + +
Sbjct: 311 MKYAESAHLLYGFGNLYSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNL 370
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
+ + + PD S+L +C+ A GK+IH RT D +
Sbjct: 371 RQPDSVLELARAFIANETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKL 430
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
A V+MY+KCG++ YA ++F R+ + +N MIA +HG ++ + FE M G
Sbjct: 431 VTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFEDMTEGGF 490
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
KPD +TF LL AC H G+V +G+ YF SM AY I+P GH++C+ID+ G+A RL +
Sbjct: 491 KPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGKAYRLDKAI 550
Query: 458 EYINKFHHL-NDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASD 516
E + + D V+LG+ L+AC + N + + + + LL + S Y+ ++N YAS
Sbjct: 551 ELMEGIDQVEKDAVILGAFLNACSWNKNTELVKEVEEKLLVIEGSNGSRYIQIANAYASS 610
Query: 517 GMWNEVTSARKMLKGSGLRKEPGYAW 542
G W+E+ R ++G L G +W
Sbjct: 611 GRWDEMQRIRHQMRGKELEIFSGCSW 636
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 168/397 (42%), Gaps = 71/397 (17%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS-------ERN--------- 64
LH ++K G F + L++MY KCG+ +F+G RN
Sbjct: 147 LHGVLVKTGNDGTKFAVSSLIHMYSKCGKFKEVCNIFNGSCVEFVDSVARNAMIAAYCRE 206
Query: 65 ------------------TVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFAST 103
T+SW+ +I+GY Q G AL + M+ + +E F +
Sbjct: 207 GDIDKALSVFWRNPELNDTISWNTLIAGYAQNGYEEEALKMAVSMEENGLKWDEHSFGAV 266
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS---------V 154
L+ +SL++L G+++H L++G S FVS+ ++ +Y KCG A S +
Sbjct: 267 LNVLSSLKSLKIGKEVHARVLKNGSYSNKFVSSGIVDVYCKCGNMKYAESAHLLYGFGNL 326
Query: 155 YANS---VG-------------------TNSVSYNALISGFVENHEPEKGFEVFK-LMLQ 191
Y+ S VG N V + A+ G++ +P+ E+ + +
Sbjct: 327 YSASSMIVGYSSQGKMVEAKRLFDSLSEKNLVVWTAMFLGYLNLRQPDSVLELARAFIAN 386
Query: 192 EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEE 251
E PD V +LG + G +H +++ + + + MY++ +E
Sbjct: 387 ETNTPDSLVMVSVLGACSLQAYMEPGKEIHGHSLRTGILMDKKLVTAFVDMYSKCGNVEY 446
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
R+F ++D + +N +I +H + KSF F++ M E +PD+ TF ++L++C
Sbjct: 447 AERIFDSSFERDTVMYNAMIAGCAHHGHEAKSFQHFED-MTEGGFKPDEITFMALLSACR 505
Query: 312 WHASFLHGKQIHAFLFRTRQYW-DVGVHNALVNMYAK 347
L G++ + + G + ++++Y K
Sbjct: 506 HRGLVLEGEKYFKSMIEAYNISPETGHYTCMIDLYGK 542
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 19/162 (11%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H L+ G+ + ++MY KCG V A ++FD ER+TV ++AMI+G G
Sbjct: 415 IHGHSLRTGILMDKKLVTAFVDMYSKCGNVEYAERIFDSSFERDTVMYNAMIAGCAHHGH 474
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQ-------QIHGLSLRSGYAS 130
+ F M P+E F + LSAC +++G+ + + +S +G+ +
Sbjct: 475 EAKSFQHFEDMTEGGFKPDEITFMALLSACRHRGLVLEGEKYFKSMIEAYNISPETGHYT 534
Query: 131 ISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISG 172
+I +Y K + A+ + G + V +A+I G
Sbjct: 535 C------MIDLYGKAYRLDKAIELME---GIDQVEKDAVILG 567
>AT5G52850.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:21414935-21417616 REVERSE
LENGTH=893
Length = 893
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 146/529 (27%), Positives = 275/529 (51%), Gaps = 7/529 (1%)
Query: 17 MTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISG 74
+ FG +H+ ++ G+ +V + L++ Y + ++ A +V + E++ W++++SG
Sbjct: 240 LEFGKTIHSNIIVRGIPLNVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSG 299
Query: 75 YDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASI 131
+ + A+ F +M+ L PN F +++ LS C+++R+L G+QIH +++ G+
Sbjct: 300 FVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDS 359
Query: 132 SFVSNSLITMYMKCGQCS-DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
+ V N+L+ MYMKC +A V+ V N VS+ LI G V++ + F + M+
Sbjct: 360 TDVGNALVDMYMKCSASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMV 419
Query: 191 QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
+ P+ + G+L + L R + +H ++ +D ++GN ++ YA ++
Sbjct: 420 KREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVD 479
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
V R ++ +D I++ +L+ F+ + M + IR D + +++
Sbjct: 480 YAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGD-GIRMDQLSLPGFISAS 538
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+ GK +H + ++ V N+LV+MY+KCGS+ A KVF +++ +++SWN
Sbjct: 539 ANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWN 598
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAA 430
+++ ++G A+ FE+M+ + +PDSVTF LL AC++ + G YF M+
Sbjct: 599 GLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKI 658
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGER 490
Y I P + H+ L+ +LGRAGRL E + H + ++ +LL ACR GN+++GE
Sbjct: 659 YNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGED 718
Query: 491 LAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+A L + P + Y+LL++LY G R ++ L K+ G
Sbjct: 719 MANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRLSKKLG 767
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 131/428 (30%), Positives = 229/428 (53%), Gaps = 16/428 (3%)
Query: 6 IGTLLQRCSKTMTF----------GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARK 55
+G L + C + ++F +H V+K GL ++ + N LL++Y+K + ARK
Sbjct: 20 LGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARK 79
Query: 56 VFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRA 112
+FD MS R +W+ MIS + + E AL LF +M PNEF F+S + +CA LR
Sbjct: 80 LFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRD 139
Query: 113 LVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISG 172
+ G ++HG +++G+ S V +SL +Y KCGQ +A ++++ +++S+ +IS
Sbjct: 140 ISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMISS 199
Query: 173 FVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCT 232
V + + + + M++ G P+ F+FV LLG S+ L G ++H + +
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFL-GLEFGKTIHSNIIVRGIPLN 258
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
++ ++ Y+QF+ +E+ VRV ++DV W ++++ F ++ F EM +
Sbjct: 259 VVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRS 318
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC-GSI 351
++P++FT+++IL+ C+ S GKQIH+ + V NALV+MY KC S
Sbjct: 319 -LGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 352 GYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
A +VF M N++SW T+I +HG + + +M V+P+ VT +G+L AC
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 412 NHSGMVRK 419
+ VR+
Sbjct: 438 SKLRHVRR 445
>AT3G29230.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:11188803-11190605 FORWARD
LENGTH=600
Length = 600
Score = 252 bits (644), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 159/535 (29%), Positives = 274/535 (51%), Gaps = 34/535 (6%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LHA +++ L + ++ +L++ C + LA +VF+ + E N +++I + Q +
Sbjct: 38 LHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQNSQ 97
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ A +FS+M+ + + F + L AC+ L + +H + G +S +V N+
Sbjct: 98 PYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIEKLGLSSDIYVPNA 157
Query: 138 LITMYMKCGQ--CSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
LI Y +CG DA+ ++ ++VS+N+++ G V+ E +F M Q
Sbjct: 158 LIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRLFDEMPQRD-- 215
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC---TPLIGNVIMSM----YAQFNF 248
L+ ++T LD + C+ + A + P V S Y++
Sbjct: 216 --------LISWNTMLDGY-----ARCREMSKAFELFEKMPERNTVSWSTMVMGYSKAGD 262
Query: 249 IEEVVRVFR--LIQDKDVISWNTLINAFSHFDDQG--KSFLFFKEMMNECSIRPDDFTFA 304
+E +F + K+V++W +I ++ ++G K + M ++ D
Sbjct: 263 MEMARVMFDKMPLPAKNVVTWTIIIAGYA---EKGLLKEADRLVDQMVASGLKFDAAAVI 319
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR 364
SILA+CT G +IH+ L R+ + V NAL++MYAKCG++ A VF+ + +
Sbjct: 320 SILAACTESGLLSLGMRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKAFDVFNDIPKK 379
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYF 424
+L+SWNTM+ G HG G+ AIE+F +M+ EG++PD VTF +L +CNH+G++ +G YF
Sbjct: 380 DLVSWNTMLHGLGVHGHGKEAIELFSRMRREGIRPDKVTFIAVLCSCNHAGLIDEGIDYF 439
Query: 425 NSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
SME Y + P + H+ CL+D+LGR GRL E + + + V+ G+LL ACR+H
Sbjct: 440 YSMEKVYDLVPQVEHYGCLVDLLGRVGRLKEAIKVVQTMPMEPNVVIWGALLGACRMHNE 499
Query: 485 MAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+ I + + L+++ P Y LLSN+YA+ W V R +K G+ K G
Sbjct: 500 VDIAKEVLDNLVKLDPCDPGNYSLLSNIYAAAEDWEGVADIRSKMKSMGVEKPSG 554
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 165/388 (42%), Gaps = 24/388 (6%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNS 163
L CA+L Q +Q+H +R ++ LI+ C Q + A+ V+ N
Sbjct: 26 LPKCANLN---QVKQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNV 82
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
N+LI +N +P + F VF M + G D F++ LL + +H
Sbjct: 83 HLCNSLIRAHAQNSQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNH 142
Query: 224 AVKLALDCTPLIGNVIMSMYAQFN--FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
KL L + N ++ Y++ + + +++F + ++D +SWN+++ +
Sbjct: 143 IEKLGLSSDIYVPNALIDCYSRCGGLGVRDAMKLFEKMSERDTVSWNSMLGGLVKAGELR 202
Query: 282 KSFLFFKEMMNECSIRPDDFTFASIL---ASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
+ F EM D ++ ++L A C + LF +
Sbjct: 203 DARRLFDEMPQR-----DLISWNTMLDGYARCREMSKAFE-------LFEKMPERNTVSW 250
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSY--RNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
+ +V Y+K G + A +F KM +N+++W +IA + GL + A + +QM A G
Sbjct: 251 STMVMGYSKAGDMEMARVMFDKMPLPAKNVVTWTIIIAGYAEKGLLKEADRLVDQMVASG 310
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
+K D+ +L AC SG++ G + +S+ + N + L+DM + G L +
Sbjct: 311 LKFDAAAVISILAACTESGLLSLG-MRIHSILKRSNLGSNAYVLNALLDMYAKCGNLKKA 369
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHGN 484
+ N D V ++L VHG+
Sbjct: 370 FDVFNDIPK-KDLVSWNTMLHGLGVHGH 396
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNH 379
KQ+HA + R + D+ + L++ + C A +VF+++ N+ N++I A +
Sbjct: 36 KQLHAQIIRRNLHEDLHIAPKLISALSLCRQTNLAVRVFNQVQEPNVHLCNSLIRAHAQN 95
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGH 439
+A +F +M+ G+ D+ T+ LL AC+ + + N +E G++ +I
Sbjct: 96 SQPYQAFFVFSEMQRFGLFADNFTYPFLLKACSGQSWLPVVKMMHNHIE-KLGLSSDIYV 154
Query: 440 FSCLIDMLGRAGRLSEVEEYINKFHHLN--DPVVLGSLLSACRVHGNMAIGERL 491
+ LID R G L V + + F ++ D V S+L G + RL
Sbjct: 155 PNALIDCYSRCGGLG-VRDAMKLFEKMSERDTVSWNSMLGGLVKAGELRDARRL 207
>AT2G46050.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18939262-18941034 FORWARD
LENGTH=590
Length = 590
Score = 251 bits (642), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 158/535 (29%), Positives = 269/535 (50%), Gaps = 21/535 (3%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQ---- 77
H ++K G+ + +F+ N+LL Y K A K+FD M RN V+W+ +I G Q
Sbjct: 59 HGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWNILIHGVIQRDGD 118
Query: 78 ------CGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASI 131
G +++ LF+ + + + F + C + G Q+H L ++ G S
Sbjct: 119 TNHRAHLGFCYLSRILFTDVSL--DHVSFMGLIRLCTDSTNMKAGIQLHCLMVKQGLESS 176
Query: 132 SFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
F S SL+ Y KCG +A V+ + + V +NAL+S +V N ++ F + KLM
Sbjct: 177 CFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDEAFGLLKLMGS 236
Query: 192 EG--FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
+ F D F+F LL G +H K++ + +++MYA+ N +
Sbjct: 237 DKNRFRGDYFTFSSLLSACR----IEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHL 292
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
+ F + ++V+SWN +I F+ + ++ F +M+ E +++PD+ TFAS+L+S
Sbjct: 293 SDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLE-NLQPDELTFASVLSS 351
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
C ++ KQ+ A + + + V N+L++ Y++ G++ A F + +L+SW
Sbjct: 352 CAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSW 411
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
++I A +HG E ++++FE M + ++PD +TF +L AC+H G+V++G F M
Sbjct: 412 TSVIGALASHGFAEESLQMFESM-LQKLQPDKITFLEVLSACSHGGLVQEGLRCFKRMTE 470
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
Y I H++CLID+LGRAG + E + +N L + C +H +
Sbjct: 471 FYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSMPTEPSTHALAAFTGGCNIHEKRESMK 530
Query: 490 RLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR-KEPGYAWL 543
AK LLE+ P Y +LSN Y S+G WN+ RK + + K PG +WL
Sbjct: 531 WGAKKLLEIEPTKPVNYSILSNAYVSEGHWNQAALLRKRERRNCYNPKTPGCSWL 585
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 120/384 (31%), Positives = 187/384 (48%), Gaps = 16/384 (4%)
Query: 108 ASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYN 167
ASL L +Q HG ++ G + F+ N L+ Y K + DA ++ N V++N
Sbjct: 47 ASLDHLSDVKQEHGFMVKQGIYNSLFLQNKLLQAYTKIREFDDADKLFDEMPLRNIVTWN 106
Query: 168 ALISGFVE-----NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHC 222
LI G ++ NH GF +L D SF+GL+ T+ + + G+ LHC
Sbjct: 107 ILIHGVIQRDGDTNHRAHLGFCYLSRILFTDVSLDHVSFMGLIRLCTDSTNMKAGIQLHC 166
Query: 223 QAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGK 282
VK L+ + ++ Y + I E RVF + D+D++ WN L++++ +
Sbjct: 167 LMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGMIDE 226
Query: 283 SFLFFKEM-MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
+F K M ++ R D FTF+S+L++C GKQIHA LF+ +D+ V AL
Sbjct: 227 AFGLLKLMGSDKNRFRGDYFTFSSLLSACRIE----QGKQIHAILFKVSYQFDIPVATAL 282
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
+NMYAK + A + F M RN++SWN MI F +G G A+ +F QM E ++PD
Sbjct: 283 LNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDE 342
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
+TF +L +C + + +M G A + + LI R G LSE +
Sbjct: 343 LTFASVLSSCAKFSAIWEIK-QVQAMVTKKGSADFLSVANSLISSYSRNGNLSEA---LL 398
Query: 462 KFHHLNDP--VVLGSLLSACRVHG 483
FH + +P V S++ A HG
Sbjct: 399 CFHSIREPDLVSWTSVIGALASHG 422
Score = 143 bits (361), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 167/353 (47%), Gaps = 24/353 (6%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH ++K GL+S F S L++ Y KCG +V AR+VF+ + +R+ V W+A++S Y G
Sbjct: 164 LHCLMVKQGLESSCFPSTSLVHFYGKCGLIVEARRVFEAVLDRDLVLWNALVSSYVLNGM 223
Query: 81 HWMALHLFSQMKVLPNE-----FVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
A L M N F F+S LSAC + QG+QIH + + Y V+
Sbjct: 224 IDEAFGLLKLMGSDKNRFRGDYFTFSSLLSAC----RIEQGKQIHAILFKVSYQFDIPVA 279
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+L+ MY K SDA + + V N VS+NA+I GF +N E + +F ML E
Sbjct: 280 TALLNMYAKSNHLSDARECFESMVVRNVVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQ 339
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD +F +L + K + N ++S Y++ + E +
Sbjct: 340 PDELTFASVLSSCAKFSAIWEIKQVQAMVTKKGSADFLSVANSLISSYSRNGNLSEALLC 399
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F I++ D++SW ++I A + +S F+ M+ + ++PD TF +L++C+
Sbjct: 400 FHSIREPDLVSWTSVIGALASHGFAEESLQMFESMLQK--LQPDKITFLEVLSACS---- 453
Query: 316 FLHGKQIHAFLF---RTRQYWDVGVHN----ALVNMYAKCGSIGYAHKVFSKM 361
HG + L R +++ + + L+++ + G I A V + M
Sbjct: 454 --HGGLVQEGLRCFKRMTEFYKIEAEDEHYTCLIDLLGRAGFIDEASDVLNSM 504
Score = 121 bits (303), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 112/204 (54%), Gaps = 4/204 (1%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
T +LL C +HA + K+ Q + V+ LLNMY K + AR+ F+ M RN
Sbjct: 247 TFSSLLSACRIEQGKQIHAILFKVSYQFDIPVATALLNMYAKSNHLSDARECFESMVVRN 306
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHG 121
VSW+AMI G+ Q GE A+ LF QM + P+E FAS LS+CA A+ + +Q+
Sbjct: 307 VVSWNAMIVGFAQNGEGREAMRLFGQMLLENLQPDELTFASVLSSCAKFSAIWEIKQVQA 366
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
+ + G A V+NSLI+ Y + G S+AL + + + VS+ ++I + E+
Sbjct: 367 MVTKKGSADFLSVANSLISSYSRNGNLSEALLCFHSIREPDLVSWTSVIGALASHGFAEE 426
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLL 205
++F+ MLQ+ PD+ +F+ +L
Sbjct: 427 SLQMFESMLQK-LQPDKITFLEVL 449
>AT4G21065.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11245976-11247763 FORWARD
LENGTH=595
Length = 595
Score = 251 bits (641), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 236/441 (53%), Gaps = 10/441 (2%)
Query: 112 ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV------GTNSVS 165
++ + +QIH S+R G + + Y+ +S YA+ V N
Sbjct: 29 SITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMS-YAHKVFSKIEKPINVFI 87
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQA 224
+N LI G+ E F +++ M G V PD ++ L+ T + D R G ++H
Sbjct: 88 WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147
Query: 225 VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSF 284
++ + N ++ +YA + +VF + +KD+++WN++IN F+ ++
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
+ EM N I+PD FT S+L++C + GK++H ++ + ++ N L+++
Sbjct: 208 ALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDL 266
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA-EGVKPDSVT 403
YA+CG + A +F +M +N +SW ++I +G G+ AIE+F+ M++ EG+ P +T
Sbjct: 267 YARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEIT 326
Query: 404 FTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
F G+L AC+H GMV++G YF M Y I P I HF C++D+L RAG++ + EYI
Sbjct: 327 FVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSM 386
Query: 464 HHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVT 523
+ V+ +LL AC VHG+ + E +L++ P + YVLLSN+YAS+ W++V
Sbjct: 387 PMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQ 446
Query: 524 SARKMLKGSGLRKEPGYAWLK 544
RK + G++K PG++ ++
Sbjct: 447 KIRKQMLRDGVKKVPGHSLVE 467
Score = 146 bits (369), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 13/338 (3%)
Query: 53 ARKVFDGMSER-NTVSWSAMISGYDQCGEHWMALHLFSQMKV----LPNEFVFASTLSAC 107
A KVF + + N W+ +I GY + G A L+ +M+V P+ + + A
Sbjct: 72 AHKVFSKIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAV 131
Query: 108 ASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYN 167
++ + G+ IH + +RSG+ S+ +V NSL+ +Y CG + A V+ + V++N
Sbjct: 132 TTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWN 191
Query: 168 ALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL 227
++I+GF EN +PE+ ++ M +G PD F+ V LL + G +H +K+
Sbjct: 192 SVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKV 251
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
L NV++ +YA+ +EE +F + DK+ +SW +LI + ++ F
Sbjct: 252 GLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELF 311
Query: 288 KEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH----NALVN 343
K M + + P + TF IL +C+ H + K+ + R R+ + + +V+
Sbjct: 312 KYMESTEGLLPCEITFVGILYACS-HCGMV--KEGFEYFRRMREEYKIEPRIEHFGCMVD 368
Query: 344 MYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG 380
+ A+ G + A++ M + N++ W T++ A HG
Sbjct: 369 LLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 149/297 (50%), Gaps = 38/297 (12%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H+ V++ G S ++V N LL++Y CG V A KVFD M E++ V+W+++I+G+ + G+
Sbjct: 143 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 202
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL L+++M + P+ F S LSACA + AL G+++H ++ G SN
Sbjct: 203 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 262
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ-EGFVP 196
L+ +Y +CG+ +A +++ V NSVS+ +LI G N ++ E+FK M EG +P
Sbjct: 263 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 322
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
+FVG+L + HC VK + F + E ++
Sbjct: 323 CEITFVGILYACS-----------HCGMVKEGFE--------------YFRRMREEYKIE 357
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
I+ + +++ + K++ + K M ++P+ + ++L +CT H
Sbjct: 358 PRIEH-----FGCMVDLLARAGQVKKAYEYIKSM----PMQPNVVIWRTLLGACTVH 405
>AT1G64310.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23866053-23867711 FORWARD
LENGTH=552
Length = 552
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 266/533 (49%), Gaps = 5/533 (0%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
++ T LH+ V K L + + QL Y ++ ARK+FD ER+ W+++I
Sbjct: 20 TRLNTQKLHSFVTKSKLARDPYFATQLARFYALNDDLISARKLFDVFPERSVFLWNSIIR 79
Query: 74 GYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYAS 130
Y + + L LFSQ+ P+ F +A + + IHG+++ SG
Sbjct: 80 AYAKAHQFTTVLSLFSQILRSDTRPDNFTYACLARGFSESFDTKGLRCIHGIAIVSGLGF 139
Query: 131 ISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
++++ Y K G +A ++ + + +N +I G+ +KG +F LM
Sbjct: 140 DQICGSAIVKAYSKAGLIVEASKLFCSIPDPDLALWNVMILGYGCCGFWDKGINLFNLMQ 199
Query: 191 QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
G P+ ++ V L + S+H +K+ LD +G +++MY++ I
Sbjct: 200 HRGHQPNCYTMVALTSGLIDPSLLLVAWSVHAFCLKINLDSHSYVGCALVNMYSRCMCIA 259
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
VF I + D+++ ++LI +S + ++ F E+ +PD A +L SC
Sbjct: 260 SACSVFNSISEPDLVACSSLITGYSRCGNHKEALHLFAELRMS-GKKPDCVLVAIVLGSC 318
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWN 370
+ + GK++H+++ R D+ V +AL++MY+KCG + A +F+ + +N++S+N
Sbjct: 319 AELSDSVSGKEVHSYVIRLGLELDIKVCSALIDMYSKCGLLKCAMSLFAGIPEKNIVSFN 378
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAA 430
++I G HG A E F ++ G+ PD +TF+ LL C HSG++ KG F M++
Sbjct: 379 SLILGLGLHGFASTAFEKFTEILEMGLIPDEITFSALLCTCCHSGLLNKGQEIFERMKSE 438
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGER 490
+GI P H+ ++ ++G AG+L E E++ D +LG+LLS C VH N + E
Sbjct: 439 FGIEPQTEHYVYMVKLMGMAGKLEEAFEFVMSLQKPIDSGILGALLSCCEVHENTHLAEV 498
Query: 491 LAKLLLEVPPVTTSPY-VLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAW 542
+A+ + + S Y V+LSN+YA G W+EV R + S K PG +W
Sbjct: 499 VAENIHKNGEERRSVYKVMLSNVYARYGRWDEVERLRDGISESYGGKLPGISW 551
>AT5G15300.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4968384-4970030 REVERSE
LENGTH=548
Length = 548
Score = 248 bits (634), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 159/548 (29%), Positives = 273/548 (49%), Gaps = 54/548 (9%)
Query: 9 LLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLL---NMYVKCGRVVLARKVFDGMSERN 64
L Q C T +HA+++ GL S++ V +L+ ++ V G + A K+FD + + +
Sbjct: 18 LWQNCKNIRTLKQIHASMVVNGLMSNLSVVGELIYSASLSVP-GALKYAHKLFDEIPKPD 76
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHG 121
+ ++ G Q + + L+++M+ V P+ + F L AC+ L G HG
Sbjct: 77 VSICNHVLRGSAQSMKPEKTVSLYTEMEKRGVSPDRYTFTFVLKACSKLEWRSNGFAFHG 136
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
+R G+ +V N+LI + CG A ++ +S + V+++++ SG+ + + ++
Sbjct: 137 KVVRHGFVLNEYVKNALILFHANCGDLGIASELFDDSAKAHKVAWSSMTSGYAKRGKIDE 196
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
+F M + V G L C+ + A +
Sbjct: 197 AMRLFDEMPYKDQVAWNVMITG---------------CLKCKEMDSARE----------- 230
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDF 301
+F +KDV++WN +I+ + + ++ FKEM + PD
Sbjct: 231 -------------LFDRFTEKDVVTWNAMISGYVNCGYPKEALGIFKEM-RDAGEHPDVV 276
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQ-----YWDVGVHNALVNMYAKCGSIGYAHK 356
T S+L++C GK++H ++ T Y + NAL++MYAKCGSI A +
Sbjct: 277 TILSLLSACAVLGDLETGKRLHIYILETASVSSSIYVGTPIWNALIDMYAKCGSIDRAIE 336
Query: 357 VFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
VF + R+L +WNT+I H E +IE+FE+M+ V P+ VTF G+++AC+HSG
Sbjct: 337 VFRGVKDRDLSTWNTLIVGLALHH-AEGSIEMFEEMQRLKVWPNEVTFIGVILACSHSGR 395
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLL 476
V +G YF+ M Y I PNI H+ C++DMLGRAG+L E ++ + +V +LL
Sbjct: 396 VDEGRKYFSLMRDMYNIEPNIKHYGCMVDMLGRAGQLEEAFMFVESMKIEPNAIVWRTLL 455
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRK 536
AC+++GN+ +G+ + LL + + YVLLSN+YAS G W+ V RKM + ++K
Sbjct: 456 GACKIYGNVELGKYANEKLLSMRKDESGDYVLLSNIYASTGQWDGVQKVRKMFDDTRVKK 515
Query: 537 EPGYAWLK 544
G + ++
Sbjct: 516 PTGVSLIE 523
>AT5G66520.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26551879-26553741 FORWARD
LENGTH=620
Length = 620
Score = 248 bits (633), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 243/480 (50%), Gaps = 42/480 (8%)
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY 155
N + S L C+ L +QIH L++G S+ ++ + SD L Y
Sbjct: 13 NLYETMSCLQRCSKQEEL---KQIHARMLKTGLMQDSYAITKFLSFCIS-STSSDFLP-Y 67
Query: 156 ANSV-----GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
A V ++ +N +I GF + EPE+ +++ ML + ++F LL +N
Sbjct: 68 AQIVFDGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSN 127
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ----------FNFIEE--------- 251
L F +H Q KL + N +++ YA F+ I E
Sbjct: 128 LSAFEETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSV 187
Query: 252 ------------VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
+ +FR + +K+ ISW T+I+ + D ++ F EM N + PD
Sbjct: 188 IKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNS-DVEPD 246
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
+ + A+ L++C + GK IH++L +TR D + L++MYAKCG + A +VF
Sbjct: 247 NVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFK 306
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
+ +++ +W +I+ + HG G AI F +M+ G+KP+ +TFT +L AC+++G+V +
Sbjct: 307 NIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEE 366
Query: 420 GDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSAC 479
G L F SME Y + P I H+ C++D+LGRAG L E + +I + + V+ G+LL AC
Sbjct: 367 GKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKAC 426
Query: 480 RVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
R+H N+ +GE + ++L+ + P YV +N++A D W++ R+++K G+ K PG
Sbjct: 427 RIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPG 486
Score = 135 bits (341), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 184/427 (43%), Gaps = 48/427 (11%)
Query: 8 TLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGR---VVLARKVFDGMSER 63
+ LQRCSK +HA +LK GL + + L+ + + A+ VFDG
Sbjct: 19 SCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRP 78
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIH 120
+T W+ MI G+ E +L L+ +M N + F S L AC++L A + QIH
Sbjct: 79 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIH 138
Query: 121 GLSLRSGYASISFVSNSLITMY-------------------------------MKCGQCS 149
+ GY + + NSLI Y +K G+
Sbjct: 139 AQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMD 198
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
AL+++ N++S+ +ISG+V+ ++ ++F M PD S L
Sbjct: 199 IALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACA 258
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
L G +H K + ++G V++ MYA+ +EE + VF+ I+ K V +W
Sbjct: 259 QLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTA 318
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
LI+ +++ ++ F E M + I+P+ TF ++L +C++ GK I F
Sbjct: 319 LISGYAYHGHGREAISKFME-MQKMGIKPNVITFTAVLTACSYTGLVEEGKLI--FYSME 375
Query: 330 RQY---WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG---LG 382
R Y + + +V++ + G + A + +M + N + W ++ A H LG
Sbjct: 376 RDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNIELG 435
Query: 383 ERAIEIF 389
E EI
Sbjct: 436 EEIGEIL 442
>AT1G59720.1 | Symbols: CRR28 | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:21939868-21941784 REVERSE
LENGTH=638
Length = 638
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 148/445 (33%), Positives = 230/445 (51%), Gaps = 20/445 (4%)
Query: 113 LVQGQQIHGLSLRSGYA---SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
+ Q +Q+H +LR+ Y + F+ ++ + + A V+ + +S +N L
Sbjct: 61 MSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDSIENHSSFMWNTL 120
Query: 170 ISGFVEN-HEPEKGFEVFKLMLQEG-FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL 227
I + E+ F +++ ML+ G PD+ +F +L + F G +HCQ VK
Sbjct: 121 IRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFSEGKQVHCQIVKH 180
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
+ N ++ +Y ++ +VF + ++ ++SWN++I+A F + + F
Sbjct: 181 GFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALVRFGEYDSALQLF 240
Query: 288 KEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY---WDVGVHNALVNM 344
+EM S PD +T S+L++C S G HAFL R DV V N+L+ M
Sbjct: 241 REMQR--SFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCDVDVAMDVLVKNSLIEM 298
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM--KAEGVKPDSV 402
Y KCGS+ A +VF M R+L SWN MI F HG E A+ F++M K E V+P+SV
Sbjct: 299 YCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFDRMVDKRENVRPNSV 358
Query: 403 TFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINK 462
TF GLLIACNH G V KG YF+ M Y I P + H+ C++D++ RAG ++E + +
Sbjct: 359 TFVGLLIACNHRGFVNKGRQYFDMMVRDYCIEPALEHYGCIVDLIARAGYITEAIDMVMS 418
Query: 463 FHHLNDPVVLGSLLSACRVHG-NMAIGERLAKLLLEVPPVTTS-------PYVLLSNLYA 514
D V+ SLL AC G ++ + E +A+ ++ S YVLLS +YA
Sbjct: 419 MPMKPDAVIWRSLLDACCKKGASVELSEEIARNIIGTKEDNESSNGNCSGAYVLLSRVYA 478
Query: 515 SDGMWNEVTSARKMLKGSGLRKEPG 539
S WN+V RK++ G+RKEPG
Sbjct: 479 SASRWNDVGIVRKLMSEHGIRKEPG 503
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/287 (32%), Positives = 141/287 (49%), Gaps = 23/287 (8%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +L+ C+ F +H ++K G V+V+N L+++Y CG + LARKVFD M
Sbjct: 153 TFPFVLKACAYIFGFSEGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEM 212
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK--VLPNEFVFASTLSACASLRALVQGQQ 118
ER+ VSW++MI + GE+ AL LF +M+ P+ + S LSACA L +L G
Sbjct: 213 PERSLVSWNSMIDALVRFGEYDSALQLFREMQRSFEPDGYTMQSVLSACAGLGSLSLGTW 272
Query: 119 IHGLSLRSGYASIS---FVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
H LR ++ V NSLI MY KCG A V+ + S+NA+I GF
Sbjct: 273 AHAFLLRKCDVDVAMDVLVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFAT 332
Query: 176 NHEPEKGFEVFKLML--QEGFVPDRFSFVGLL------GFSTNLDDFRTGMSLHCQAVKL 227
+ E+ F M+ +E P+ +FVGLL GF + M + ++
Sbjct: 333 HGRAEEAMNFFDRMVDKRENVRPNSVTFVGLLIACNHRGFVNKGRQY-FDMMVRDYCIEP 391
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVR-VFRLIQDKDVISWNTLINA 273
AL+ I ++I A+ +I E + V + D + W +L++A
Sbjct: 392 ALEHYGCIVDLI----ARAGYITEAIDMVMSMPMKPDAVIWRSLLDA 434
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 193/433 (44%), Gaps = 47/433 (10%)
Query: 4 ETIGTLLQRCSKTMTFG-LHAAVLKIGLQSH---VFVSNQLLNMYVKCGRVVLARKVFDG 59
+ I +L + CS LHA L+ +F+ ++L + V A +VFD
Sbjct: 49 QRIFSLAETCSDMSQLKQLHAFTLRTTYPEEPATLFLYGKILQLSSSFSDVNYAFRVFDS 108
Query: 60 MSERNTVSWSAMISG-YDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALV 114
+ ++ W+ +I A L+ +M + P++ F L ACA +
Sbjct: 109 IENHSSFMWNTLIRACAHDVSRKEEAFMLYRKMLERGESSPDKHTFPFVLKACAYIFGFS 168
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
+G+Q+H ++ G+ +V+N LI +Y CG A V+ + VS+N++I V
Sbjct: 169 EGKQVHCQIVKHGFGGDVYVNNGLIHLYGSCGCLDLARKVFDEMPERSLVSWNSMIDALV 228
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH------CQAVKLA 228
E + ++F+ M Q F PD ++ +L L G H C V +A
Sbjct: 229 RFGEYDSALQLFREM-QRSFEPDGYTMQSVLSACAGLGSLSLGTWAHAFLLRKCD-VDVA 286
Query: 229 LDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
+D L+ N ++ MY + + +VF+ +Q +D+ SWN +I F+ ++ FF
Sbjct: 287 MDV--LVKNSLIEMYCKCGSLRMAEQVFQGMQKRDLASWNAMILGFATHGRAEEAMNFFD 344
Query: 289 EMMNEC-SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHN-------- 339
M+++ ++RP+ TF +L +C H F++ + RQY+D+ V +
Sbjct: 345 RMVDKRENVRPNSVTFVGLLIACN-HRGFVN---------KGRQYFDMMVRDYCIEPALE 394
Query: 340 ---ALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
+V++ A+ G I A + M + + + W +++ A G ++E+ E++
Sbjct: 395 HYGCIVDLIARAGYITEAIDMVMSMPMKPDAVIWRSLLDACCKKGA---SVELSEEIARN 451
Query: 396 --GVKPDSVTFTG 406
G K D+ + G
Sbjct: 452 IIGTKEDNESSNG 464
>AT4G14820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8507794-8510038 REVERSE
LENGTH=722
Length = 722
Score = 248 bits (633), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 140/476 (29%), Positives = 243/476 (51%), Gaps = 34/476 (7%)
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY 155
++F F L A + + AL +G ++HG++ + FV + MY CG+ + A +V+
Sbjct: 110 DQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVF 169
Query: 156 ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF---SFVGLLGFSTNL- 211
+ V++N +I + ++ F++F+ M +PD + V G + N+
Sbjct: 170 DEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMR 229
Query: 212 -----------DDFRTGMSLHCQAVKL--ALDCTPL--------------IGNVIMSMYA 244
+D R L V + C + + ++S Y+
Sbjct: 230 YNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYS 289
Query: 245 QFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS-IRPDDFTF 303
+ +++ +F + KD++ W T+I+A+ D ++ F+EM CS I+PD +
Sbjct: 290 KCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMC--CSGIKPDVVSM 347
Query: 304 ASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSY 363
S++++C K +H+ + ++ ++NAL+NMYAKCG + VF KM
Sbjct: 348 FSVISACANLGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPR 407
Query: 364 RNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLY 423
RN++SW++MI A HG A+ +F +MK E V+P+ VTF G+L C+HSG+V +G
Sbjct: 408 RNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKI 467
Query: 424 FNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
F SM Y I P + H+ C++D+ GRA L E E I ++ V+ GSL+SACR+HG
Sbjct: 468 FASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHG 527
Query: 484 NMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+ +G+ AK +LE+ P VL+SN+YA + W +V + R++++ + KE G
Sbjct: 528 ELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKG 583
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/418 (25%), Positives = 188/418 (44%), Gaps = 43/418 (10%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH KI FV ++MY CGR+ AR VFD MS R+ V+W+ MI Y + G
Sbjct: 133 LHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNTMIERYCRFGL 192
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGL--------------S 123
A LF +MK V+P+E + + +SAC + + I+ +
Sbjct: 193 VDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTA 252
Query: 124 LRSGYASIS-----------------FVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY 166
L + YA FVS ++++ Y KCG+ DA ++ + + V +
Sbjct: 253 LVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCW 312
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK 226
+IS +VE+ P++ VF+ M G PD S ++ NL +H
Sbjct: 313 TTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHV 372
Query: 227 LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLF 286
L+ I N +++MYA+ ++ VF + ++V+SW+++INA S + +
Sbjct: 373 NGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSL 432
Query: 287 FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY---WDVGVHNALVN 343
F M E ++ P++ TF +L C+ GK+I A + T +Y + + +V+
Sbjct: 433 FARMKQE-NVEPNEVTFVGVLYGCSHSGLVEEGKKIFASM--TDEYNITPKLEHYGCMVD 489
Query: 344 MYAKCGSIGYAHKVFSKMSY-RNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
++ + + A +V M N++ W ++++A H GE + F + ++PD
Sbjct: 490 LFGRANLLREALEVIESMPVASNVVIWGSLMSACRIH--GELELGKFAAKRILELEPD 545
Score = 138 bits (348), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 163/365 (44%), Gaps = 35/365 (9%)
Query: 151 ALSVYAN-SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFST 209
AL+V+++ S+ +N + + EP ++ + G D+FSF+ +L +
Sbjct: 63 ALNVFSSIPSPPESIVFNPFLRDLSRSSEPRATILFYQRIRHVGGRLDQFSFLPILKAVS 122
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
+ GM LH A K+A C P + M MYA I VF + +DV++WNT
Sbjct: 123 KVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSHRDVVTWNT 182
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
+I + F ++F F+E M + ++ PD+ +I+++C + + + I+ FL
Sbjct: 183 MIERYCRFGLVDEAFKLFEE-MKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIEN 241
Query: 330 RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRN------------------------ 365
D + ALV MYA G + A + F KMS RN
Sbjct: 242 DVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIF 301
Query: 366 -------LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
L+ W TMI+A+ + A+ +FE+M G+KPD V+ ++ AC + G++
Sbjct: 302 DQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACANLGILD 361
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
K + +S G+ + + LI+M + G L + K N V S+++A
Sbjct: 362 KAK-WVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRN-VVSWSSMINA 419
Query: 479 CRVHG 483
+HG
Sbjct: 420 LSMHG 424
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 121/273 (44%), Gaps = 47/273 (17%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H+ + GL+S + ++N L+NMY KCG + R VF+ M RN VSWS+MI+ GE
Sbjct: 366 VHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGE 425
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN- 136
AL LF++MK V PNE F L C+ + +G++I S+ Y + +
Sbjct: 426 ASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFA-SMTDEYNITPKLEHY 484
Query: 137 -SLITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
++ ++ + +AL V + V +N V + +L+S + E E G
Sbjct: 485 GCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELG------------ 532
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
+F+ +L + D MS ++YA+ E+V
Sbjct: 533 ---KFAAKRILELEPDHDGALVLMS---------------------NIYAREQRWEDVRN 568
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
+ R++++K+V L S D GKS F
Sbjct: 569 IRRVMEEKNVFKEKGL----SRIDQNGKSHEFL 597
>AT1G71460.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:26928247-26930316 REVERSE
LENGTH=689
Length = 689
Score = 248 bits (633), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 141/443 (31%), Positives = 228/443 (51%), Gaps = 8/443 (1%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
HA +K GL + VF+ L++MY KCG+V LAR+VFD + ER+ V W AMI+G
Sbjct: 237 HALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQ 296
Query: 82 WMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRS-GYASISFVSN 136
W AL LF M K+ PN + + L ++AL G+++H L+S Y FV +
Sbjct: 297 WEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQPFVHS 356
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
LI +Y KCG + V+ S N++S+ AL+SG+ N ++ M QEGF P
Sbjct: 357 GLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVWMQQEGFRP 416
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVK-LALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
D + +L L + G +HC A+K L L L+ + +M MY++ E +R+
Sbjct: 417 DVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTS-LMVMYSKCGVPEYPIRL 475
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F ++ ++V +W +I+ + D F+ M+ RPD T +L C+ +
Sbjct: 476 FDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLS-KHRPDSVTMGRVLTVCSDLKA 534
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
GK++H + + V ++ MY KCG + A+ F ++ + ++W +I A
Sbjct: 535 LKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAVAVKGSLTWTAIIEA 594
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+G + L AI FEQM + G P++ TFT +L C+ +G V + +FN M Y + P
Sbjct: 595 YGCNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEAYRFFNLMLRMYNLQP 654
Query: 436 NIGHFSCLIDMLGRAGRLSEVEE 458
+ H+S +I++L R GR+ E +
Sbjct: 655 SEEHYSLVIELLNRCGRVEEAQR 677
Score = 173 bits (438), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 226/464 (48%), Gaps = 21/464 (4%)
Query: 5 TIGTLLQRC--SKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T LL+ C K++ G +H + GL+S+ F+ +L++MY CG V A+KVFD
Sbjct: 113 TFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTACGSVKDAQKVFDES 172
Query: 61 SERNTVSWSAMISGYDQCGE--HWMALHLFSQMKVLP---NEFVFASTLSACASLRALVQ 115
+ N SW+A++ G G+ + L F++M+ L N + ++ + A AL Q
Sbjct: 173 TSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLSNVFKSFAGASALRQ 232
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G + H L++++G + F+ SL+ MY KCG+ A V+ V + V + A+I+G
Sbjct: 233 GLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAH 292
Query: 176 NHEPEKGFEVFKLML-QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC-TP 233
N + +F+ M+ +E P+ +L ++ + G +H +K P
Sbjct: 293 NKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEVHAHVLKSKNYVEQP 352
Query: 234 LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS---HFDDQGKSFLFFKEM 290
+ + ++ +Y + + RVF + ++ ISW L++ ++ FD +S ++
Sbjct: 353 FVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGRFDQALRSIVW---- 408
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
M + RPD T A++L C + GK+IH + + +V + +L+ MY+KCG
Sbjct: 409 MQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLFLPNVSLVTSLMVMYSKCGV 468
Query: 351 IGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
Y ++F ++ RN+ +W MI + + IE+F M +PDSVT +L
Sbjct: 469 PEYPIRLFDRLEQRNVKAWTAMIDCYVENCDLRAGIEVFRLMLLSKHRPDSVTMGRVLTV 528
Query: 411 CNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
C+ ++ G +L+ + ++ + P + + +I M G+ G L
Sbjct: 529 CSDLKALKLGKELHGHILKKEFESIPFVS--ARIIKMYGKCGDL 570
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 179/379 (47%), Gaps = 10/379 (2%)
Query: 85 LHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMK 144
L Q + N F++ L AC ++L+ G+Q+H +G S F+ L+ MY
Sbjct: 99 LDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGLESNEFLRTKLVHMYTA 158
Query: 145 CGQCSDALSVYANSVGTNSVSYNALISGFVENHEP--EKGFEVFKLMLQEGFVPDRFSFV 202
CG DA V+ S +N S+NAL+ G V + + + F M + G + +S
Sbjct: 159 CGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTFTEMRELGVDLNVYSLS 218
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK 262
+ R G+ H A+K L + + ++ MY + + RVF I ++
Sbjct: 219 NVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDMYFKCGKVGLARRVFDEIVER 278
Query: 263 DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQI 322
D++ W +I +H Q ++ F+ M++E I P+ +IL + GK++
Sbjct: 279 DIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVILTTILPVLGDVKALKLGKEV 338
Query: 323 HAFLFRTRQYWDVG-VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGL 381
HA + +++ Y + VH+ L+++Y KCG + +VF RN ISW +++ + +G
Sbjct: 339 HAHVLKSKNYVEQPFVHSGLIDLYCKCGDMASGRRVFYGSKQRNAISWTALMSGYAANGR 398
Query: 382 GERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHF 440
++A+ M+ EG +PD VT +L C +++G +++ +++ + PN+
Sbjct: 399 FDQALRSIVWMQQEGFRPDVVTIATVLPVCAELRAIKQGKEIHCYALKNLF--LPNVSLV 456
Query: 441 SCLIDMLGRAGRLSEVEEY 459
+ L+ M + G V EY
Sbjct: 457 TSLMVMYSKCG----VPEY 471
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 10/245 (4%)
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
I F + E + + Q G + +F LL G +H L
Sbjct: 83 IQIFARQNNLEVALTILDYLEQRGIPVNATTFSALLEACVRRKSLLHGKQVHVHIRINGL 142
Query: 230 DCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWN-----TLINAFSHFDDQGKSF 284
+ + ++ MY +++ +VF +V SWN T+I+ + D +F
Sbjct: 143 ESNEFLRTKLVHMYTACGSVKDAQKVFDESTSSNVYSWNALLRGTVISGKKRYQDVLSTF 202
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
+E+ + ++ ++ +++ S ++ G + HA + + V + +LV+M
Sbjct: 203 TEMRELGVDLNV----YSLSNVFKSFAGASALRQGLKTHALAIKNGLFNSVFLKTSLVDM 258
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM-KAEGVKPDSVT 403
Y KCG +G A +VF ++ R+++ W MIA ++ A+ +F M E + P+SV
Sbjct: 259 YFKCGKVGLARRVFDEIVERDIVVWGAMIAGLAHNKRQWEALGLFRTMISEEKIYPNSVI 318
Query: 404 FTGLL 408
T +L
Sbjct: 319 LTTIL 323
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 79/156 (50%), Gaps = 10/156 (6%)
Query: 5 TIGTLLQRCS--KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+G +L CS K + G LH +LK +S FVS +++ MY KCG + A FD +
Sbjct: 521 TMGRVLTVCSDLKALKLGKELHGHILKKEFESIPFVSARIIKMYGKCGDLRSANFSFDAV 580
Query: 61 SERNTVSWSAMISGYDQCGEHWM-ALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ + +++W+A+I Y C E + A++ F QM PN F F + LS C+ + +
Sbjct: 581 AVKGSLTWTAIIEAYG-CNELFRDAINCFEQMVSRGFTPNTFTFTAVLSICSQAGFVDEA 639
Query: 117 QQIHGLSLRSGYASISFVSNSL-ITMYMKCGQCSDA 151
+ L LR S SL I + +CG+ +A
Sbjct: 640 YRFFNLMLRMYNLQPSEEHYSLVIELLNRCGRVEEA 675
>AT2G41080.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:17132857-17134554 FORWARD
LENGTH=565
Length = 565
Score = 245 bits (626), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 135/427 (31%), Positives = 235/427 (55%), Gaps = 6/427 (1%)
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
++G + Y S SN LI Y++ G +A V+ ++NA+I+G ++
Sbjct: 16 VYGRMRKKNYMS----SNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEF 71
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
E+G +F+ M GF PD ++ + S L G +H +K L+ ++ +
Sbjct: 72 NEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSS 131
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
+ MY + +++ V R + +++++WNTLI + + ++ L+ +MM RP
Sbjct: 132 LAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQ-NGCPETVLYLYKMMKISGCRP 190
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
+ TF ++L+SC+ A G+QIHA + V V ++L++MY+KCG +G A K F
Sbjct: 191 NKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF 250
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE-GVKPDSVTFTGLLIACNHSGMV 417
S+ + + W++MI+A+G HG G+ AIE+F M + ++ + V F LL AC+HSG+
Sbjct: 251 SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLK 310
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
KG F+ M YG P + H++C++D+LGRAG L + E I D V+ +LLS
Sbjct: 311 DKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLS 370
Query: 478 ACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
AC +H N + +R+ K +L++ P ++ YVLL+N++AS W +V+ RK ++ ++KE
Sbjct: 371 ACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKE 430
Query: 538 PGYAWLK 544
G +W +
Sbjct: 431 AGISWFE 437
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 107/386 (27%), Positives = 196/386 (50%), Gaps = 9/386 (2%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
SK F AV + + SN L+N YV+ G +V ARKVFD M +R +W+AMI+
Sbjct: 5 SKLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIA 64
Query: 74 GYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYAS 130
G Q + L LF +M L P+E+ S S A LR++ GQQIHG +++ G
Sbjct: 65 GLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLEL 124
Query: 131 ISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
V++SL MYM+ G+ D V + N V++N LI G +N PE ++K+M
Sbjct: 125 DLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMK 184
Query: 191 QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
G P++ +FV +L ++L G +H +A+K+ + + ++SMY++ +
Sbjct: 185 ISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLG 244
Query: 251 EVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+ + F +D+D + W+++I+A+ ++ F M + ++ ++ F ++L +C
Sbjct: 245 DAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYAC 304
Query: 311 TWHASFLHGKQIHAFLFRTRQY-WDVGV--HNALVNMYAKCGSIGYAHKVFSKMSYR-NL 366
+ S L K + F +Y + G+ + +V++ + G + A + M + ++
Sbjct: 305 S--HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDI 362
Query: 367 ISWNTMIAAFGNHGLGERAIEIFEQM 392
+ W T+++A H E A +F+++
Sbjct: 363 VIWKTLLSACNIHKNAEMAQRVFKEI 388
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/392 (25%), Positives = 184/392 (46%), Gaps = 33/392 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H +K GL+ + V++ L +MY++ G++ V M RN V+W+ +I G Q G
Sbjct: 113 IHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGC 172
Query: 81 HWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
L+L+ MK+ PN+ F + LS+C+ L QGQQIH +++ G +S+ V +S
Sbjct: 173 PETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSS 232
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP- 196
LI+MY KCG DA ++ + V ++++IS + + + ++ E+F M ++ +
Sbjct: 233 LISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEI 292
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAV-KLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
+ +F+ LL ++ G+ L V K ++ + + +++ +
Sbjct: 293 NEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAI 352
Query: 256 FRLIQDK-DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
R + K D++ W TL++A + + + FKE++ I P+D +LA+
Sbjct: 353 IRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQ---IDPNDSACYVLLAN----- 404
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS---KMSYRNLISWNT 371
+HA R R +V N+ + G + HK KM R+ S +
Sbjct: 405 -------VHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQ-SKSK 456
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
I ++ L E +E MK +G KPD+ +
Sbjct: 457 EIYSY----LKELTLE----MKLKGYKPDTAS 480
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 90/198 (45%), Gaps = 12/198 (6%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T T+L CS G +HA +KIG S V V + L++MY KCG + A K F
Sbjct: 194 TFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSER 253
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFS----QMKVLPNEFVFASTLSACASLRALVQG 116
+ + V WS+MIS Y G+ A+ LF+ Q + NE F + L AC+ +G
Sbjct: 254 EDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKG 313
Query: 117 QQIHGLSL-RSGYASISFVSNSLITMYMKCGQCSDALSVYANS--VGTNSVSYNALISGF 173
++ + + + G+ ++ + + G C D S + T+ V + L+S
Sbjct: 314 LELFDMMVEKYGFKPGLKHYTCVVDLLGRAG-CLDQAEAIIRSMPIKTDIVIWKTLLSAC 372
Query: 174 VENHEPEKGFEVFKLMLQ 191
+ E VFK +LQ
Sbjct: 373 NIHKNAEMAQRVFKEILQ 390
>AT4G37170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:17498580-17500655 REVERSE
LENGTH=691
Length = 691
Score = 245 bits (625), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 247/499 (49%), Gaps = 36/499 (7%)
Query: 78 CGEHWM--ALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
CG+ + A+ L + K P + + + C+ RAL +G+++H SG+ +
Sbjct: 65 CGQKLLREAVQLLGRAKKPPAS-TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIW 123
Query: 136 NSLITMYMKCGQCSDALSVYAN-----------------SVG--------------TNSV 164
N L+ MY KCG DA V+ VG +S
Sbjct: 124 NRLLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSY 183
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQ-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
S+ A+++G+V+ +PE+ ++ LM + P+ F+ + + + R G +H
Sbjct: 184 SWTAMVTGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGH 243
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
V+ LD ++ + +M MY + I+E +F I +KDV+SW ++I+ + +
Sbjct: 244 IVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREG 303
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
F F E++ C RP+++TFA +L +C + GKQ+H ++ R ++LV+
Sbjct: 304 FSLFSELVGSCE-RPNEYTFAGVLNACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVD 362
Query: 344 MYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
MY KCG+I A V +L+SW ++I +G + A++ F+ + G KPD VT
Sbjct: 363 MYTKCGNIESAKHVVDGCPKPDLVSWTSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVT 422
Query: 404 FTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
F +L AC H+G+V KG +F S+ + ++ H++CL+D+L R+GR +++ I++
Sbjct: 423 FVNVLSACTHAGLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEM 482
Query: 464 HHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVT 523
+ S+L C +GN+ + E A+ L ++ P YV ++N+YA+ G W E
Sbjct: 483 PMKPSKFLWASVLGGCSTYGNIDLAEEAAQELFKIEPENPVTYVTMANIYAAAGKWEEEG 542
Query: 524 SARKMLKGSGLRKEPGYAW 542
RK ++ G+ K PG +W
Sbjct: 543 KMRKRMQEIGVTKRPGSSW 561
Score = 143 bits (360), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 206/437 (47%), Gaps = 49/437 (11%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T L+Q CS+T +H + G + + N+LL MY KCG +V ARKVFD M
Sbjct: 87 TYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKVFDEM 146
Query: 61 -------------------------------SERNTVSWSAMISGYDQCGEHWMALHLFS 89
+E+++ SW+AM++GY + + AL L+S
Sbjct: 147 PNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMVTGYVKKDQPEEALVLYS 206
Query: 90 QMKVLPNE----FVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC 145
M+ +PN F + ++A A+++ + +G++IHG +R+G S + +SL+ MY KC
Sbjct: 207 LMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSLMDMYGKC 266
Query: 146 GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
G +A +++ V + VS+ ++I + ++ +GF +F ++ P+ ++F G+L
Sbjct: 267 GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVL 326
Query: 206 GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVI 265
+L G +H ++ D + ++ MY + IE V D++
Sbjct: 327 NACADLTTEELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLV 386
Query: 266 SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAF 325
SW +LI + ++ +F +++ + +PD TF ++L++CT HA + K + F
Sbjct: 387 SWTSLIGGCAQNGQPDEALKYF-DLLLKSGTKPDHVTFVNVLSACT-HAGLVE-KGLEFF 443
Query: 326 LFRTRQYW---DVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMI---AAFGN 378
T ++ + LV++ A+ G V S+M + + W +++ + +GN
Sbjct: 444 YSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGN 503
Query: 379 HGLGERAIEIFEQMKAE 395
L E A + +++ E
Sbjct: 504 IDLAEEAAQELFKIEPE 520
>AT4G14050.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8103645-8105483 REVERSE
LENGTH=612
Length = 612
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 142/471 (30%), Positives = 236/471 (50%), Gaps = 33/471 (7%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNS 163
L CA R L + +H ++ G ++N+L+ +Y KCG S AL V+ +
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHC 222
+++ ++++ + + K VF + + PD F F L+ NL G +HC
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 223 QAVKLALDCTPLIGNVIMSMYAQFNFI-------------------------------EE 251
+ ++ + ++ MYA+ + EE
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
+ +FR++ K++ SW LI+ F ++F F EM E D +SI+ +C
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNT 371
A+ + G+Q+H + V + NAL++MYAKC + A +FS+M +R+++SW +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
+I HG E+A+ +++ M + GVKP+ VTF GL+ AC+H G V KG F SM Y
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERL 491
GI P++ H++CL+D+LGR+G L E E I+ D +LLSAC+ G +G R+
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429
Query: 492 AKLLLEVPPVT-TSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
A L+ + S Y+LLSN+YAS +W +V+ AR+ L +RK+PG++
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHS 480
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 214/440 (48%), Gaps = 49/440 (11%)
Query: 10 LQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNT 65
LQ C++ T LHA ++K+G+ ++N L+N+Y KCG A +VFD M R+
Sbjct: 10 LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDH 69
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHG 121
++W+++++ +Q L +FS + + P++FVF++ + ACA+L ++ G+Q+H
Sbjct: 70 IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
+ S YA+ V +SL+ MY KCG + A +V+ + N++S+ A++SG+ ++ E+
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189
Query: 182 GFEVFKLM----------LQEGFVP----------------------DRFSFVGLLGFST 209
E+F+++ L GFV D ++G
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
NL G +H + L D I N ++ MYA+ + + +F ++ +DV+SW +
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH-GKQIHAFLFR 328
LI + K+ + +M++ ++P++ TF ++ +C+ H F+ G+++ F
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSH-GVKPNEVTFVGLIYACS-HVGFVEKGREL--FQSM 365
Query: 329 TRQYW---DVGVHNALVNMYAKCGSIGYAHKVFSKMSY-RNLISWNTMIAAFGNHGLGER 384
T+ Y + + L+++ + G + A + M + + +W +++A G G+
Sbjct: 366 TKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQM 425
Query: 385 AIEIFEQMKAEGVKPDSVTF 404
I I + + + D T+
Sbjct: 426 GIRIADHLVSSFKLKDPSTY 445
>AT2G37320.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:15667223-15668725 FORWARD
LENGTH=500
Length = 500
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 119/333 (35%), Positives = 196/333 (58%), Gaps = 3/333 (0%)
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
DFRTG HC A+K +G+ ++ +Y +E +VF + +++V+SW +I+
Sbjct: 135 DFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMIS 194
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
F+ + +M S P+D+TF ++L++CT + G+ +H
Sbjct: 195 GFAQEWRVDICLKLYSKMRKSTS-DPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLK 253
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE-Q 391
+ + N+L++MY KCG + A ++F + S ++++SWN+MIA + HGL +AIE+FE
Sbjct: 254 SYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELM 313
Query: 392 MKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
M G KPD++T+ G+L +C H+G+V++G +FN M A +G+ P + H+SCL+D+LGR G
Sbjct: 314 MPKSGTKPDAITYLGVLSSCRHAGLVKEGRKFFNLM-AEHGLKPELNHYSCLVDLLGRFG 372
Query: 452 RLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSN 511
L E E I + V+ GSLL +CRVHG++ G R A+ L + P + +V L+N
Sbjct: 373 LLQEALELIENMPMKPNSVIWGSLLFSCRVHGDVWTGIRAAEERLMLEPDCAATHVQLAN 432
Query: 512 LYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
LYAS G W E + RK++K GL+ PG +W++
Sbjct: 433 LYASVGYWKEAATVRKLMKDKGLKTNPGCSWIE 465
Score = 131 bits (330), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
G H LK G S V++ + L+ +Y G V A KVF+ M ERN VSW+AMISG+ Q
Sbjct: 141 GFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVFEEMPERNVVSWTAMISGFAQEW 200
Query: 80 EHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+ L L+S+M+ PN++ F + LSAC AL QG+ +H +L G S +SN
Sbjct: 201 RVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALGQGRSVHCQTLHMGLKSYLHISN 260
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML-QEGFV 195
SLI+MY KCG DA ++ + VS+N++I+G+ ++ + E+F+LM+ + G
Sbjct: 261 SLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYAQHGLAMQAIELFELMMPKSGTK 320
Query: 196 PDRFSFVGLL 205
PD +++G+L
Sbjct: 321 PDAITYLGVL 330
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/325 (24%), Positives = 149/325 (45%), Gaps = 34/325 (10%)
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY 155
+ + +S + +C R G H L+L+ G+ S ++ +SL+ +Y G+ +A V+
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 156 ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFR 215
N VS+ A+ISGF + + +++ M + P+ ++F LL T
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 216 TGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS 275
G S+HCQ + + L I N ++SMY + +++ R+F +KDV+SWN++I ++
Sbjct: 239 QGRSVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSNKDVVSWNSMIAGYA 298
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
++ F+ MM + +PD T+ +L+SC
Sbjct: 299 QHGLAMQAIELFELMMPKSGTKPDAITYLGVLSSCR------------------------ 334
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
H LV K ++ H + ++++ ++ ++ G GL + A+E+ E M
Sbjct: 335 --HAGLVKEGRKFFNLMAEHGLKPELNH-----YSCLVDLLGRFGLLQEALELIENMP-- 385
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKG 420
+KP+SV + LL +C G V G
Sbjct: 386 -MKPNSVIWGSLLFSCRVHGDVWTG 409
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 94/207 (45%), Gaps = 4/207 (1%)
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D + +S + SC + F G H + DV + ++LV +Y G + A+KVF
Sbjct: 119 DAYGLSSAVRSCGLNRDFRTGSGFHCLALKGGFISDVYLGSSLVVLYRDSGEVENAYKVF 178
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
+M RN++SW MI+ F + ++++ +M+ P+ TFT LL AC SG +
Sbjct: 179 EEMPERNVVSWTAMISGFAQEWRVDICLKLYSKMRKSTSDPNDYTFTALLSACTGSGALG 238
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
+G + G+ + + LI M + G L + ++F + D V S+++
Sbjct: 239 QGR-SVHCQTLHMGLKSYLHISNSLISMYCKCGDLKDAFRIFDQFSN-KDVVSWNSMIAG 296
Query: 479 CRVHGNMAIGERLAKLLLEVPPVTTSP 505
HG L +L++ P T P
Sbjct: 297 YAQHGLAMQAIELFELMM--PKSGTKP 321
>AT1G32415.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:11695611-11697896 FORWARD LENGTH=761
Length = 761
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 271/542 (50%), Gaps = 59/542 (10%)
Query: 20 GLHAAVLKIGLQS--HVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQ 77
G+ A L G S +V ++ Y + G V A ++F M ERN VSW+AMISG+
Sbjct: 215 GMEEAKLLFGDMSEKNVVTWTSMVYGYCRYGDVREAYRLFCEMPERNIVSWTAMISGFAW 274
Query: 78 CGEHWMALHLFSQMK-----VLPNEFVFASTLSACASLRALVQ--GQQIHGLSLRSGYAS 130
+ AL LF +MK V PN S AC L + G+Q+H + +G+ +
Sbjct: 275 NELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLHAQVISNGWET 334
Query: 131 ISF---VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFK 187
+ ++ SL+ MY G + A S+ S S N +I+ +++N + E+ +F+
Sbjct: 335 VDHDGRLAKSLVHMYASSGLIASAQSLLNESFDLQSC--NIIINRYLKNGDLERAETLFE 392
Query: 188 LMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN 247
+ + D+ S+ ++ Y +
Sbjct: 393 RVKS---LHDKVSWTSMI-----------------------------------DGYLEAG 414
Query: 248 FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL 307
+ +F+ + DKD ++W +I+ + ++ +M+ C ++P + T++ +L
Sbjct: 415 DVSRAFGLFQKLHDKDGVTWTVMISGLVQNELFAEAASLLSDMV-RCGLKPLNSTYSVLL 473
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGV--HNALVNMYAKCGSIGYAHKVFSKMSYRN 365
+S ++ GK IH + +T +D + N+LV+MYAKCG+I A+++F+KM ++
Sbjct: 474 SSAGATSNLDQGKHIHCVIAKTTACYDPDLILQNSLVSMYAKCGAIEDAYEIFAKMVQKD 533
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
+SWN+MI +HGL ++A+ +F++M G KP+SVTF G+L AC+HSG++ +G F
Sbjct: 534 TVSWNSMIMGLSHHGLADKALNLFKEMLDSGKKPNSVTFLGVLSACSHSGLITRGLELFK 593
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSAC----RV 481
+M+ Y I P I H+ +ID+LGRAG+L E EE+I+ D V G+LL C R
Sbjct: 594 AMKETYSIQPGIDHYISMIDLLGRAGKLKEAEEFISALPFTPDHTVYGALLGLCGLNWRD 653
Query: 482 HGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
I ER A LLE+ PV +V L N+YA G + RK + G++K PG +
Sbjct: 654 KDAEGIAERAAMRLLELDPVNAPGHVALCNVYAGLGRHDMEKEMRKEMGIKGVKKTPGCS 713
Query: 542 WL 543
W+
Sbjct: 714 WV 715
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 100/415 (24%), Positives = 180/415 (43%), Gaps = 64/415 (15%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLF 88
G + V LL+ Y K G + AR +F+ M ERN V+ +AM++GY +C A LF
Sbjct: 72 GSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIVTCNAMLTGYVKCRRMNEAWTLF 131
Query: 89 SQMKVLPNEFVFASTLSACASLRALV-QGQQIHGLSLRSGYASISFVS-NSLITMYMKCG 146
+M P V + + L AL G+ + L + VS N+L+T ++ G
Sbjct: 132 REM---PKNVVSWTVM-----LTALCDDGRSEDAVELFDEMPERNVVSWNTLVTGLIRNG 183
Query: 147 QCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLG 206
A V+ + VS+NA+I G++EN E+ +F M ++ V G
Sbjct: 184 DMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGMEEAKLLFGDMSEKNVVTWTSMVYG--- 240
Query: 207 FSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVIS 266
Y ++ + E R+F + +++++S
Sbjct: 241 ------------------------------------YCRYGDVREAYRLFCEMPERNIVS 264
Query: 267 WNTLINAFSHFDDQGKSFLFFKEMMNEC-SIRPDDFTFASILASCTWHASFLH--GKQIH 323
W +I+ F+ + ++ + F EM + ++ P+ T S+ +C G+Q+H
Sbjct: 265 WTAMISGFAWNELYREALMLFLEMKKDVDAVSPNGETLISLAYACGGLGVEFRRLGEQLH 324
Query: 324 AFLFRTRQYWDVGVHN-----ALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
A + W+ H+ +LV+MYA G I A + ++ S+ +L S N +I +
Sbjct: 325 AQVISNG--WETVDHDGRLAKSLVHMYASSGLIASAQSLLNE-SF-DLQSCNIIINRYLK 380
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGI 433
+G ERA +FE++K+ D V++T ++ +G V + F + G+
Sbjct: 381 NGDLERAETLFERVKS---LHDKVSWTSMIDGYLEAGDVSRAFGLFQKLHDKDGV 432
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 135/318 (42%), Gaps = 64/318 (20%)
Query: 110 LRALVQGQQIHGLSL-----RSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSV 164
LR L +G +H L + G + SL++ Y K G +A ++ N V
Sbjct: 50 LRRLSEGGLVHARHLLDKIPQRGSINRVVYWTSLLSKYAKTGYLDEARVLFEVMPERNIV 109
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQA 224
+ NA+++G+V+ + + +F+ M + + S+ +L + DD R+ A
Sbjct: 110 TCNAMLTGYVKCRRMNEAWTLFREMPK-----NVVSWTVML--TALCDDGRSE-----DA 157
Query: 225 VKLALDCTP----LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQ 280
V+L D P + N +++ + +E+ +VF + +DV+SWN +I + D
Sbjct: 158 VEL-FDEMPERNVVSWNTLVTGLIRNGDMEKAKQVFDAMPSRDVVSWNAMIKGYIENDGM 216
Query: 281 GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA 340
++ L F +M + + TW S ++G
Sbjct: 217 EEAKLLFGDMSEKNVV--------------TW-TSMVYG--------------------- 240
Query: 341 LVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK--AEGVK 398
Y + G + A+++F +M RN++SW MI+ F + L A+ +F +MK + V
Sbjct: 241 ----YCRYGDVREAYRLFCEMPERNIVSWTAMISGFAWNELYREALMLFLEMKKDVDAVS 296
Query: 399 PDSVTFTGLLIACNHSGM 416
P+ T L AC G+
Sbjct: 297 PNGETLISLAYACGGLGV 314
>AT5G52630.1 | Symbols: MEF1 | mitochondrial RNAediting factor 1 |
chr5:21350375-21352141 FORWARD LENGTH=588
Length = 588
Score = 244 bits (623), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 245/441 (55%), Gaps = 2/441 (0%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNS 163
L + A R+ ++G Q+HG ++SG + I V+N+LI Y K D+ + +S +S
Sbjct: 22 LLSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSS 81
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
+++++IS F +N P E K M+ PD L G S+HC
Sbjct: 82 TTWSSIISCFAQNELPWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCL 141
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
++K D +G+ ++ MYA+ I ++F + ++V++W+ ++ ++ + ++
Sbjct: 142 SMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEA 201
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
FKE + E ++ +D++F+S+++ C G+QIH ++ V ++LV+
Sbjct: 202 LWLFKEALFE-NLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVS 260
Query: 344 MYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
+Y+KCG A++VF+++ +NL WN M+ A+ H ++ IE+F++MK G+KP+ +T
Sbjct: 261 LYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFIT 320
Query: 404 FTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
F +L AC+H+G+V +G YF+ M+ + I P H++ L+DMLGRAGRL E E I
Sbjct: 321 FLNVLNACSHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
Query: 464 HHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVT 523
V G+LL++C VH N + A + E+ PV++ ++ LSN YA+DG + +
Sbjct: 380 PIDPTESVWGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAA 439
Query: 524 SARKMLKGSGLRKEPGYAWLK 544
ARK+L+ G +KE G +W++
Sbjct: 440 KARKLLRDRGEKKETGLSWVE 460
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 172/345 (49%), Gaps = 6/345 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH V+K GL V+N L+N Y K +R+ F+ ++++ +WS++IS + Q
Sbjct: 37 LHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKSSTTWSSIISCFAQNEL 96
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
WM+L +M + P++ V S +CA L G+ +H LS+++GY + FV +S
Sbjct: 97 PWMSLEFLKKMMAGNLRPDDHVLPSATKSCAILSRCDIGRSVHCLSMKTGYDADVFVGSS 156
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MY KCG+ A ++ N V+++ ++ G+ + E E+ +FK L E +
Sbjct: 157 LVDMYAKCGEIVYARKMFDEMPQRNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVN 216
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
+SF ++ N G +H ++K + D + +G+ ++S+Y++ E +VF
Sbjct: 217 DYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVPEGAYQVFN 276
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+ K++ WN ++ A++ K FK M ++P+ TF ++L +C+ HA +
Sbjct: 277 EVPVKNLGIWNAMLKAYAQHSHTQKVIELFKR-MKLSGMKPNFITFLNVLNACS-HAGLV 334
Query: 318 HGKQIHAFLFRTRQYWDVGVHNA-LVNMYAKCGSIGYAHKVFSKM 361
+ + + + H A LV+M + G + A +V + M
Sbjct: 335 DEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNM 379
>AT2G01510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:230752-232506 REVERSE
LENGTH=584
Length = 584
Score = 244 bits (622), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 231/429 (53%), Gaps = 3/429 (0%)
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
Q ++IH + LR+G++ + + L+ + G A V+ +N L G+V
Sbjct: 26 QLKKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYV 85
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
N P + ++K M G PD F++ ++ + L DF G +LH VK C +
Sbjct: 86 RNQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGI 145
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
+ ++ MY +F + +F +Q KD+++WN + + + +F +M +
Sbjct: 146 VATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD- 204
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
+++ D FT S+L++C S G++I+ + ++ V NA ++M+ KCG+ A
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAA 264
Query: 355 HKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+F +M RN++SW+TMI + +G A+ +F M+ EG++P+ VTF G+L AC+H+
Sbjct: 265 RVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHA 324
Query: 415 GMVRKGDLYFNSMEAA--YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL 472
G+V +G YF+ M + + P H++C++D+LGR+G L E E+I K D +
Sbjct: 325 GLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIW 384
Query: 473 GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGS 532
G+LL AC VH +M +G+++A +L+E P S +VLLSN+YA+ G W+ V R ++
Sbjct: 385 GALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Query: 533 GLRKEPGYA 541
G +K Y+
Sbjct: 445 GTKKVAAYS 453
Score = 136 bits (342), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 202/451 (44%), Gaps = 41/451 (9%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA VL+ G + QLL V G + AR+VFD M + W+ + GY +
Sbjct: 30 IHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGYVRNQL 89
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ +L L+ +M+ V P+EF + + A + L G +H ++ G+ + V+
Sbjct: 90 PFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATE 149
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L+ MYMK G+ S A ++ + + V++NA ++ V+ E F M + D
Sbjct: 150 LVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFD 209
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
F+ V +L L G ++ +A K +DC ++ N + M+ + E +F
Sbjct: 210 SFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEAARVLFE 269
Query: 258 LIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
++ ++V+SW+T+I ++ D ++ F M NE +RP+ TF +L++C+ HA +
Sbjct: 270 EMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNE-GLRPNYVTFLGVLSACS-HAGLV 327
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
+ ++Y+ + V + N+ + K Y M+ G
Sbjct: 328 N---------EGKRYFSLMVQSNDKNLEPR------------KEHY------ACMVDLLG 360
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN-HSGMVRKGDLYFNSMEAAYGIAPN 436
GL E A E ++M E PD+ + LL AC H M+ L + AP+
Sbjct: 361 RSGLLEEAYEFIKKMPVE---PDTGIWGALLGACAVHRDMI----LGQKVADVLVETAPD 413
Query: 437 IGHFSCLI-DMLGRAGRLSEVEEYINKFHHL 466
IG + L+ ++ AG+ V++ +K L
Sbjct: 414 IGSYHVLLSNIYAAAGKWDCVDKVRSKMRKL 444
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 181/408 (44%), Gaps = 60/408 (14%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
F LHA V+K G V+ +L+ MY+K G + A +F+ M ++ V+W+A ++ Q
Sbjct: 129 FALHAHVVKYGFGCLGIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQT 188
Query: 79 GEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
G +AL F++M V + F S LSAC L +L G++I+ + + V
Sbjct: 189 GNSAIALEYFNKMCADAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVE 248
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
N+ + M++KCG A ++ N VS++ +I G+ N + + +F M EG
Sbjct: 249 NARLDMHLKCGNTEAARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLR 308
Query: 196 PDRFSFVGLLGFSTN---LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
P+ +F+G+L ++ +++ + SL Q+ L+ ++ + + +EE
Sbjct: 309 PNYVTFLGVLSACSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEE- 367
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
++ F K+M + PD + ++L +C
Sbjct: 368 ------------------------------AYEFIKKM----PVEPDTGIWGALLGACAV 393
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALV-NMYAKCGSIGYAHKVFSKMSY---RNLIS 368
H + G+++ L T D+G ++ L+ N+YA G KV SKM + + +
Sbjct: 394 HRDMILGQKVADVLVETAP--DIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAA 451
Query: 369 WNTM----IAAFGNHG---------LGERAIEIFEQMKAEGVKPDSVT 403
++++ F N G + E+ EI ++++ G PD+ +
Sbjct: 452 YSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCS 499
>AT2G20540.1 | Symbols: MEF21 | mitochondrial editing factor 21 |
chr2:8844160-8845764 FORWARD LENGTH=534
Length = 534
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 221/453 (48%), Gaps = 39/453 (8%)
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
IHGLS SF+ ++ K A ++ N YN++I + N
Sbjct: 35 IHGLS------QSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFLYNSIIRAYTHNSL 88
Query: 179 PEKGFEVFKLMLQEGF-VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
++K +L++ F +PDRF+F + +L G +H K + N
Sbjct: 89 YCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHLCKFGPRFHVVTEN 148
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGK--------------- 282
++ MY +F+ + + +VF + ++DVISWN+L++ ++ K
Sbjct: 149 ALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAKGLFHLMLDKTIVS 208
Query: 283 ----------------SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
+ FF+E M I PD+ + S+L SC S GK IH +
Sbjct: 209 WTAMISGYTGIGCYVEAMDFFRE-MQLAGIEPDEISLISVLPSCAQLGSLELGKWIHLYA 267
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAI 386
R GV NAL+ MY+KCG I A ++F +M +++ISW+TMI+ + HG AI
Sbjct: 268 ERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMISGYAYHGNAHGAI 327
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDM 446
E F +M+ VKP+ +TF GLL AC+H GM ++G YF+ M Y I P I H+ CLID+
Sbjct: 328 ETFNEMQRAKVKPNGITFLGLLSACSHVGMWQEGLRYFDMMRQDYQIEPKIEHYGCLIDV 387
Query: 447 LGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPY 506
L RAG+L E D + GSLLS+CR GN+ + L+E+ P Y
Sbjct: 388 LARAGKLERAVEITKTMPMKPDSKIWGSLLSSCRTPGNLDVALVAMDHLVELEPEDMGNY 447
Query: 507 VLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
VLL+N+YA G W +V+ RKM++ ++K PG
Sbjct: 448 VLLANIYADLGKWEDVSRLRKMIRNENMKKTPG 480
Score = 119 bits (297), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 106/485 (21%), Positives = 209/485 (43%), Gaps = 74/485 (15%)
Query: 9 LLQRC-SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVS 67
LQR S+ ++A+++ GL F+ ++++ K + A ++F+ +S N
Sbjct: 16 FLQRVKSRNEWKKINASIIIHGLSQSSFMVTKMVDFCDKIEDMDYATRLFNQVSNPNVFL 75
Query: 68 WSAMISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLS 123
++++I Y + + ++ Q+ LP+ F F +CASL + G+Q+HG
Sbjct: 76 YNSIIRAYTHNSLYCDVIRIYKQLLRKSFELPDRFTFPFMFKSCASLGSCYLGKQVHGHL 135
Query: 124 LRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGF 183
+ G N+LI MYMK DA V+ + +S+N+L+SG+ + +K
Sbjct: 136 CKFGPRFHVVTENALIDMYMKFDDLVDAHKVFDEMYERDVISWNSLLSGYARLGQMKKAK 195
Query: 184 EVFKLMLQE-------------------------------GFVPDRFSFVGLLGFSTNLD 212
+F LML + G PD S + +L L
Sbjct: 196 GLFHLMLDKTIVSWTAMISGYTGIGCYVEAMDFFREMQLAGIEPDEISLISVLPSCAQLG 255
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
G +H A + + N ++ MY++ I + +++F ++ KDVISW+T+I+
Sbjct: 256 SLELGKWIHLYAERRGFLKQTGVCNALIEMYSKCGVISQAIQLFGQMEGKDVISWSTMIS 315
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
+++ + + F E M ++P+ TF +L++C+ + G +Y
Sbjct: 316 GYAYHGNAHGAIETFNE-MQRAKVKPNGITFLGLLSACSHVGMWQEG----------LRY 364
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
+D+ + +++ K+ + + +I G ERA+EI + M
Sbjct: 365 FDMMRQD---------------YQIEPKIEH-----YGCLIDVLARAGKLERAVEITKTM 404
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP-NIGHFSCLIDMLGRAG 451
+KPDS + LL +C G + D+ +M+ + P ++G++ L ++ G
Sbjct: 405 P---MKPDSKIWGSLLSSCRTPGNL---DVALVAMDHLVELEPEDMGNYVLLANIYADLG 458
Query: 452 RLSEV 456
+ +V
Sbjct: 459 KWEDV 463
>AT2G21090.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:9045695-9047488 REVERSE
LENGTH=597
Length = 597
Score = 242 bits (618), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 149/509 (29%), Positives = 244/509 (47%), Gaps = 63/509 (12%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASI-SFVSNSLITMYMKCGQCSDALSVYAN 157
+ AS L C ++L QG+ IH +G+ + +SN LI MYMKCG+ DA V+
Sbjct: 48 LLASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYMKCGKPIDACKVFDQ 107
Query: 158 SVGTNSVSYNALISGFVE-----------NHEPEKGFEVFKLML---------------- 190
N S+N ++SG+V+ + PE+ + M+
Sbjct: 108 MHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFY 167
Query: 191 ----QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQF 246
+ G + FSF GLL + H Q + ++ I+ YA+
Sbjct: 168 KEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKC 227
Query: 247 NFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM---------------- 290
+E R F + KD+ W TLI+ ++ D + F EM
Sbjct: 228 GQMESAKRCFDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYV 287
Query: 291 --------------MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
M ++P+ FTF+S L + AS HGK+IH ++ RT +
Sbjct: 288 RQGSGNRALDLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAI 347
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
V ++L++MY+K GS+ + +VF + + + WNTMI+A HGLG +A+ + + M
Sbjct: 348 VISSLIDMYSKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKF 407
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
V+P+ T +L AC+HSG+V +G +F SM +GI P+ H++CLID+LGRAG E
Sbjct: 408 RVQPNRTTLVVILNACSHSGLVEEGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKE 467
Query: 456 VEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYAS 515
+ I + D + ++L CR+HGN +G++ A L+++ P +++PY+LLS++YA
Sbjct: 468 LMRKIEEMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAPYILLSSIYAD 527
Query: 516 DGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
G W V R ++K + KE +W++
Sbjct: 528 HGKWELVEKLRGVMKKRRVNKEKAVSWIE 556
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 190/404 (47%), Gaps = 45/404 (11%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VL 94
N +++ YVK G +V AR VFD M ER+ VSW+ M+ GY Q G AL + + + +
Sbjct: 117 NNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIGYAQDGNLHEALWFYKEFRRSGIK 176
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ------C 148
NEF FA L+AC R L +Q HG L +G+ S +S S+I Y KCGQ C
Sbjct: 177 FNEFSFAGLLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRC 236
Query: 149 SDALSVYANSVGT-------------------------NSVSYNALISGFVENHEPEKGF 183
D ++V + T N VS+ ALI+G+V +
Sbjct: 237 FDEMTVKDIHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRAL 296
Query: 184 EVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMY 243
++F+ M+ G P++F+F L S ++ R G +H ++ + ++ + ++ MY
Sbjct: 297 DLFRKMIALGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMY 356
Query: 244 AQFNFIEEVVRVFRLIQDK-DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
++ +E RVFR+ DK D + WNT+I+A + K+ +M+ + ++P+ T
Sbjct: 357 SKSGSLEASERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMI-KFRVQPNRTT 415
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNMYAKCGSIGYAHKVFS 359
IL +C+ H+ + + + F T Q+ D + L+++ + G +
Sbjct: 416 LVVILNACS-HSGLVE-EGLRWFESMTVQHGIVPDQEHYACLIDLLGRAGCFKELMRKIE 473
Query: 360 KMSYR-NLISWNTMIAA---FGNHGLGERAIEIFEQMKAEGVKP 399
+M + + WN ++ GN LG++A + ++ E P
Sbjct: 474 EMPFEPDKHIWNAILGVCRIHGNEELGKKAADELIKLDPESSAP 517
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 109/236 (46%), Gaps = 39/236 (16%)
Query: 9 LLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS--- 61
LL C K+ L H VL G S+V +S +++ Y KCG++ A++ FD M+
Sbjct: 185 LLTACVKSRQLQLNRQAHGQVLVAGFLSNVVLSCSIIDAYAKCGQMESAKRCFDEMTVKD 244
Query: 62 ----------------------------ERNTVSWSAMISGYDQCGEHWMALHLFSQMKV 93
E+N VSW+A+I+GY + G AL LF +M
Sbjct: 245 IHIWTTLISGYAKLGDMEAAEKLFCEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIA 304
Query: 94 L---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
L P +F F+S L A AS+ +L G++IHG +R+ + V +SLI MY K G
Sbjct: 305 LGVKPEQFTFSSCLCASASIASLRHGKEIHGYMIRTNVRPNAIVISSLIDMYSKSGSLEA 364
Query: 151 ALSVYANSVGT-NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
+ V+ + V +N +IS ++ K + M++ P+R + V +L
Sbjct: 365 SERVFRICDDKHDCVFWNTMISALAQHGLGHKALRMLDDMIKFRVQPNRTTLVVIL 420
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 111/282 (39%), Gaps = 39/282 (13%)
Query: 289 EMMNECSIR-PDDFTFASILASCTWHASFLHGKQIHAFLFRTR-QYWDVGVHNALVNMYA 346
E + + IR P D AS+L C S GK IH L T + + + N L+ MY
Sbjct: 35 ESLTQQGIRLPFDL-LASLLQQCGDTKSLKQGKWIHRHLKITGFKRPNTLLSNHLIGMYM 93
Query: 347 KCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM-------------- 392
KCG A KVF +M RNL SWN M++ + G+ RA +F+ M
Sbjct: 94 KCGKPIDACKVFDQMHLRNLYSWNNMVSGYVKSGMLVRARVVFDSMPERDVVSWNTMVIG 153
Query: 393 -----------------KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ G+K + +F GLL AC S ++ + A G
Sbjct: 154 YAQDGNLHEALWFYKEFRRSGIKFNEFSFAGLLTACVKSRQLQLNRQAHGQVLVA-GFLS 212
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
N+ +ID + G++ + ++ + D + +L+S G+M E KL
Sbjct: 213 NVVLSCSIIDAYAKCGQMESAKRCFDEM-TVKDIHIWTTLISGYAKLGDMEAAE---KLF 268
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
E+P + L Y G N + + G++ E
Sbjct: 269 CEMPEKNPVSWTALIAGYVRQGSGNRALDLFRKMIALGVKPE 310
>AT3G58590.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:21666262-21668487 FORWARD
LENGTH=741
Length = 741
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/493 (31%), Positives = 236/493 (47%), Gaps = 39/493 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH + K GL + V N L++ Y KCG +A ++F + VSW+A+I +
Sbjct: 237 LHCSATKKGLDCEISVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSEN 296
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL LF M PN+ + S L + ++ L G+QIHG+ +++G + + N+
Sbjct: 297 PLKALKLFVSMPEHGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNA 356
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
LI Y KCG D+ + N V +NAL+SG+ P +F MLQ GF P
Sbjct: 357 LIDFYAKCGNLEDSRLCFDYIRDKNIVCWNALLSGYANKDGP-ICLSLFLQMLQMGFRPT 415
Query: 198 RFSF------------------VGLLGFSTNLDDFRTGMSLHCQ-----AVKLALD---- 230
++F + +G+ N + M + + L LD
Sbjct: 416 EYTFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASG 475
Query: 231 ---CTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFF 287
PL N++ +Y++ E V++ ++ D +SWN I A S D + F
Sbjct: 476 PTSVVPL--NIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELF 533
Query: 288 KEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR-QYWDVGVHNALVNMYA 346
K M+ + +IRPD +TF SIL+ C+ G IH + +T D V N L++MY
Sbjct: 534 KHML-QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYG 592
Query: 347 KCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTG 406
KCGSI KVF + +NLI+W +I+ G HG G+ A+E F++ + G KPD V+F
Sbjct: 593 KCGSIRSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFIS 652
Query: 407 LLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHL 466
+L AC H GMV++G F M+ YG+ P + H+ C +D+L R G L E E I +
Sbjct: 653 ILTACRHGGMVKEGMGLFQKMK-DYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFP 711
Query: 467 NDPVVLGSLLSAC 479
D V + L C
Sbjct: 712 ADAPVWRTFLDGC 724
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 131/450 (29%), Positives = 221/450 (49%), Gaps = 25/450 (5%)
Query: 4 ETIGTLLQRCSKTMTFG----LHAAVLKIG--LQSHVFVSNQLLNMYVKCGRVVLARKVF 57
+ + +LL C K +F LHA + + L V+V N ++++Y K G V LA KVF
Sbjct: 13 DRVVSLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVF 72
Query: 58 DGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALV 114
D M ERN VS++ +I GY + G+ A +FS+M+ LPN+ + LS CASL +
Sbjct: 73 DQMPERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLLS-CASLD-VR 130
Query: 115 QGQQIHGLSLRSG-YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGF 173
G Q+HGLSL+ G + + +FV L+ +Y + A V+ + + ++N ++S
Sbjct: 131 AGTQLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLL 190
Query: 174 VENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP 233
++ F+ +++ G SF+G+L + + D LHC A K LDC
Sbjct: 191 GHRGFLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEI 250
Query: 234 LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNE 293
+ N ++S Y + R+F+ D++SWN +I A + ++ K+ F M E
Sbjct: 251 SVVNSLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVS-MPE 309
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGY 353
P+ T+ S+L + G+QIH L + + + NAL++ YAKCG++
Sbjct: 310 HGFSPNQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLED 369
Query: 354 AHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN- 412
+ F + +N++ WN +++ + N G + +F QM G +P TF+ L +C
Sbjct: 370 SRLCFDYIRDKNIVCWNALLSGYANKD-GPICLSLFLQMLQMGFRPTEYTFSTALKSCCV 428
Query: 413 ------HSGMVRKG----DLYFNSMEAAYG 432
HS +VR G D +S+ +Y
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYA 458
Score = 152 bits (385), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 128/507 (25%), Positives = 225/507 (44%), Gaps = 59/507 (11%)
Query: 21 LHAAVLKIGL-QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
LH LK GL + FV LL +Y + + +A +VF+ M ++ +W+ M+S G
Sbjct: 135 LHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQVFEDMPFKSLETWNHMMSLLGHRG 194
Query: 80 EHWMALHLFSQ---MKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+ F + M E F L + ++ L +Q+H + + G V N
Sbjct: 195 FLKECMFFFRELVRMGASLTESSFLGVLKGVSCVKDLDISKQLHCSATKKGLDCEISVVN 254
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
SLI+ Y KCG A ++ ++ + VS+NA+I ++ P K ++F M + GF P
Sbjct: 255 SLISAYGKCGNTHMAERMFQDAGSWDIVSWNAIICATAKSENPLKALKLFVSMPEHGFSP 314
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
++ ++V +LG S+ + G +H +K + ++GN ++ YA+ +E+ F
Sbjct: 315 NQGTYVSVLGVSSLVQLLSCGRQIHGMLIKNGCETGIVLGNALIDFYAKCGNLEDSRLCF 374
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
I+DK+++ WN L++ +++ D LF + M + RP ++TF++ L SC
Sbjct: 375 DYIRDKNIVCWNALLSGYANKDGPICLSLFLQ--MLQMGFRPTEYTFSTALKSCC----V 428
Query: 317 LHGKQIHAFLFR-------------TRQY--------------WDVGVH-----NALVNM 344
+Q+H+ + R R Y W G N + +
Sbjct: 429 TELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPTSVVPLNIVAGI 488
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
Y++ G + K+ S + + +SWN IAA E IE+F+ M ++PD TF
Sbjct: 489 YSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHMLQSNIRPDKYTF 548
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSC--------LIDMLGRAGRLSEV 456
+L C+ + DL S + +G+ FSC LIDM G+ G + V
Sbjct: 549 VSILSLCS-----KLCDLTLGS--SIHGLITKT-DFSCADTFVCNVLIDMYGKCGSIRSV 600
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHG 483
+ + N + +L+S +HG
Sbjct: 601 MKVFEETREKN-LITWTALISCLGIHG 626
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 141/318 (44%), Gaps = 37/318 (11%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFV---------SNQLLN------------- 42
T T L+ C T LH+ ++++G + + +V NQL+N
Sbjct: 418 TFSTALKSCCVTELQQLHSVIVRMGYEDNDYVLSSLMRSYAKNQLMNDALLLLDWASGPT 477
Query: 43 ----------MYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM- 91
+Y + G+ + K+ + + +TVSW+ I+ + H + LF M
Sbjct: 478 SVVPLNIVAGIYSRRGQYHESVKLISTLEQPDTVSWNIAIAACSRSDYHEEVIELFKHML 537
Query: 92 --KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA-SISFVSNSLITMYMKCGQC 148
+ P+++ F S LS C+ L L G IHGL ++ ++ + +FV N LI MY KCG
Sbjct: 538 QSNIRPDKYTFVSILSLCSKLCDLTLGSSIHGLITKTDFSCADTFVCNVLIDMYGKCGSI 597
Query: 149 SDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFS 208
+ V+ + N +++ ALIS + ++ E FK L GF PDR SF+ +L
Sbjct: 598 RSVMKVFEETREKNLITWTALISCLGIHGYGQEALEKFKETLSLGFKPDRVSFISILTAC 657
Query: 209 TNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ-DKDVISW 267
+ + GM L + ++ + + A+ +++E + R + D W
Sbjct: 658 RHGGMVKEGMGLFQKMKDYGVEPEMDHYRCAVDLLARNGYLKEAEHLIREMPFPADAPVW 717
Query: 268 NTLINAFSHFDDQGKSFL 285
T ++ + F ++ ++ L
Sbjct: 718 RTFLDGCNRFAEEQRNTL 735
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 6/157 (3%)
Query: 305 SILASCTWHASFLHGKQIHAFLFR--TRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
S+L C SF K +HA + V V N ++++Y K G + A KVF +M
Sbjct: 17 SLLNVCRKAPSFARTKALHALSITLCSVLLQPVYVCNNIISLYEKLGEVSLAGKVFDQMP 76
Query: 363 YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDL 422
RN +S+NT+I + +G ++A +F +M+ G P+ T +GLL +C S VR G
Sbjct: 77 ERNKVSFNTIIKGYSKYGDVDKAWGVFSEMRYFGYLPNQSTVSGLL-SC-ASLDVRAGT- 133
Query: 423 YFNSMEAAYGI-APNIGHFSCLIDMLGRAGRLSEVEE 458
+ + YG+ + +CL+ + GR L E+
Sbjct: 134 QLHGLSLKYGLFMADAFVGTCLLCLYGRLDLLEMAEQ 170
>AT4G01030.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr4:448336-450642 REVERSE LENGTH=768
Length = 768
Score = 242 bits (617), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 167/589 (28%), Positives = 283/589 (48%), Gaps = 88/589 (14%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ LLQ CS F +H VL++GL+S+V + N L+ MY + G++ L+RKVF+ M
Sbjct: 91 TMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSM 150
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACAS-------- 109
+RN SW++++S Y + G A+ L +M++ P+ + S LS AS
Sbjct: 151 KDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAI 210
Query: 110 ---------------------LRALVQ------GQQIHGLSLRSGYASISFVSNSLITMY 142
L+A+ + G+ IHG LR+ +V +LI MY
Sbjct: 211 AVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQLWYDVYVETTLIDMY 270
Query: 143 MKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
+K G A V+ N V++N+L+SG + + M +EG PD ++
Sbjct: 271 IKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITW- 329
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK 262
N + S YA E+ + V +++K
Sbjct: 330 ----------------------------------NSLASGYATLGKPEKALDVIGKMKEK 355
Query: 263 ----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA--SCTWHASF 316
+V+SW + + S + + F +M E + P+ T +++L C S
Sbjct: 356 GVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILGCL---SL 411
Query: 317 LH-GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
LH GK++H F R D V ALV+MY K G + A ++F + ++L SWN M+
Sbjct: 412 LHSGKEVHGFCLRKNLICDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMG 471
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ G GE I F M G++PD++TFT +L C +SG+V++G YF+ M + YGI P
Sbjct: 472 YAMFGRGEEGIAAFSVMLEAGMEPDAITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIP 531
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
I H SC++D+LGR+G L E ++I D + G+ LS+C++H ++ + E K L
Sbjct: 532 TIEHCSCMVDLLGRSGYLDEAWDFIQTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRL 591
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ P ++ Y+++ NLY++ W +V R +++ + +R + ++W++
Sbjct: 592 QVLEPHNSANYMMMINLYSNLNRWEDVERIRNLMRNNRVRVQDLWSWIQ 640
Score = 119 bits (298), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/404 (22%), Positives = 176/404 (43%), Gaps = 73/404 (18%)
Query: 116 GQQIHGLSLRSGYA-SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
G IHG ++ G S + V ++ + Y +C A ++ + +++N ++ +
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
+ EK E+F+ M G + V LL +N + F G +H ++L L+
Sbjct: 66 RSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVS 125
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
+ N ++ MY++ +E +VF ++D+++ SWN+++++++ + E M C
Sbjct: 126 MCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDE-MEIC 184
Query: 295 SIRPDDFTFASILA-------------------------SCTWHASFLH----------G 319
++PD T+ S+L+ S + +S L G
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLG 244
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI------ 373
K IH ++ R + ++DV V L++MY K G + YA VF M +N+++WN+++
Sbjct: 245 KAIHGYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYA 304
Query: 374 -----------------------------AAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
+ + G E+A+++ +MK +GV P+ V++
Sbjct: 305 CLLKDAEALMIRMEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSW 364
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
T + C+ +G R F M+ G+ PN S L+ +LG
Sbjct: 365 TAIFSGCSKNGNFRNALKVFIKMQEE-GVGPNAATMSTLLKILG 407
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/486 (22%), Positives = 195/486 (40%), Gaps = 90/486 (18%)
Query: 21 LHAAVLKIGLQ-SHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+H ++K GL S V + + Y +C + A K+FD M +R+ ++W+ ++ + G
Sbjct: 9 IHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNLRSG 68
Query: 80 EHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
A+ LF +M+ + L C++ +G+QIHG LR G S + N
Sbjct: 69 NWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNVSMCN 128
Query: 137 SLITMYMKCGQC------------------SDALSVYA------NSVG-----------T 161
SLI MY + G+ + LS Y +++G
Sbjct: 129 SLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKP 188
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
+ V++N+L+SG+ + V K M G P S LL + G ++H
Sbjct: 189 DIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIH 248
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
++ L + ++ MY + ++ VF ++ K++++WN+L++ S+
Sbjct: 249 GYILRNQLWYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLK 308
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
+ M E I+PD T+ N+L
Sbjct: 309 DAEALMIRMEKE-GIKPDAITW-----------------------------------NSL 332
Query: 342 VNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
+ YA G A V KM + N++SW + + +G A+++F +M+ EGV
Sbjct: 333 ASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALKVFIKMQEEGV 392
Query: 398 KPDSVTFTGLL-----IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
P++ T + LL ++ HSG G ++ +A + L+DM G++G
Sbjct: 393 GPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVA------TALVDMYGKSGD 446
Query: 453 LSEVEE 458
L E
Sbjct: 447 LQSAIE 452
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 118/238 (49%), Gaps = 3/238 (1%)
Query: 217 GMSLHCQAVKLALDCTPL-IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS 275
G+++H +K LD + + + M Y + + ++F + +D ++WN ++
Sbjct: 6 GLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPKRDDLAWNEIVMVNL 65
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
+ K+ F+EM + + D T +L C+ F G+QIH ++ R +V
Sbjct: 66 RSGNWEKAVELFREMQFSGA-KAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLGLESNV 124
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
+ N+L+ MY++ G + + KVF+ M RNL SWN++++++ G + AI + ++M+
Sbjct: 125 SMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEIC 184
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
G+KPD VT+ LL G+ + M+ A G+ P+ S L+ + G L
Sbjct: 185 GLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIA-GLKPSTSSISSLLQAVAEPGHL 241
>AT4G25270.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:12937253-12938836 REVERSE
LENGTH=527
Length = 527
Score = 242 bits (617), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 142/439 (32%), Positives = 229/439 (52%), Gaps = 10/439 (2%)
Query: 99 VFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS 158
+FAS L C SLRA+ G ++H L + +S+ L+ +Y CG A V+
Sbjct: 94 IFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDRM 153
Query: 159 VGTNS--VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRT 216
+S ++N+LISG+ E + E ++ M ++G PDRF+F +L + +
Sbjct: 154 SKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQI 213
Query: 217 GMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH 276
G ++H VK + N ++ MYA+ I + VF +I KD +SWN+++ + H
Sbjct: 214 GEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYLH 273
Query: 277 FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG 336
++ F+ +M + I PD +S+LA SF HG+Q+H ++ R W++
Sbjct: 274 HGLLHEALDIFR-LMVQNGIEPDKVAISSVLARVL---SFKHGRQLHGWVIRRGMEWELS 329
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
V NAL+ +Y+K G +G A +F +M R+ +SWN +I+A H ++ FEQM
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISA---HSKNSNGLKYFEQMHRAN 386
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
KPD +TF +L C ++GMV G+ F+ M YGI P + H++C++++ GRAG + E
Sbjct: 387 AKPDGITFVSVLSLCANTGMVEDGERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEA 446
Query: 457 EEYINKFHHLN-DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYAS 515
I + L P V G+LL AC +HGN IGE A+ L E+ P + LL +Y+
Sbjct: 447 YSMIVQEMGLEAGPTVWGALLYACYLHGNTDIGEVAAQRLFELEPDNEHNFELLIRIYSK 506
Query: 516 DGMWNEVTSARKMLKGSGL 534
+V R+M+ GL
Sbjct: 507 AKRAEDVERVRQMMVDRGL 525
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 116/469 (24%), Positives = 223/469 (47%), Gaps = 62/469 (13%)
Query: 4 ETIGTLLQRCS--KTMTFGL--HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
E +LL+ C + + G+ H + L++++ +S++L+ +Y CG +A +VFD
Sbjct: 93 EIFASLLETCYSLRAIDHGVRVHHLIPPYLLRNNLGISSKLVRLYASCGYAEVAHEVFDR 152
Query: 60 MSERNT--VSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALV 114
MS+R++ +W+++ISGY + G++ A+ L+ QM V P+ F F L AC + ++
Sbjct: 153 MSKRDSSPFAWNSLISGYAELGQYEDAMALYFQMAEDGVKPDRFTFPRVLKACGGIGSVQ 212
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
G+ IH ++ G+ +V N+L+ MY KCG A +V+ + VS+N++++G++
Sbjct: 213 IGEAIHRDLVKEGFGYDVYVLNALVVMYAKCGDIVKARNVFDMIPHKDYVSWNSMLTGYL 272
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
+ + ++F+LM+Q G PD+ + +L + F+ G LH ++ ++
Sbjct: 273 HHGLLHEALDIFRLMVQNGIEPDKVAISSVLA---RVLSFKHGRQLHGWVIRRGMEWELS 329
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
+ N ++ +Y++ + + +F + ++D +SWN +I+A S + K F E M+
Sbjct: 330 VANALIVLYSKRGQLGQACFIFDQMLERDTVSWNAIISAHSKNSNGLKYF----EQMHRA 385
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
+ +PD TF S+L+ C A G +
Sbjct: 386 NAKPDGITFVSVLSLC-----------------------------------ANTGMVEDG 410
Query: 355 HKVFSKMSYRNLIS-----WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
++FS MS I + M+ +G G+ E A + Q G++ + LL
Sbjct: 411 ERLFSLMSKEYGIDPKMEHYACMVNLYGRAGMMEEAYSMIVQ--EMGLEAGPTVWGALLY 468
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGH-FSCLIDMLGRAGRLSEVE 457
AC G G++ + + + + P+ H F LI + +A R +VE
Sbjct: 469 ACYLHGNTDIGEV---AAQRLFELEPDNEHNFELLIRIYSKAKRAEDVE 514
>AT5G03800.1 | Symbols: EMB175, emb1899, EMB166 | Pentatricopeptide
repeat (PPR) superfamily protein | chr5:1010894-1013584
REVERSE LENGTH=896
Length = 896
Score = 241 bits (616), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 160/590 (27%), Positives = 276/590 (46%), Gaps = 57/590 (9%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVK-----CGRVVLARK 55
T +L C + F L H ++K G + VFVSN L+++Y K C V+ K
Sbjct: 183 TFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDVL---K 239
Query: 56 VFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLP----NEFVFASTLSACASLR 111
+FD + +R+ SW+ ++S + G+ A LF +M + + F ++ LS+C
Sbjct: 240 LFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSS 299
Query: 112 ALVQGQQIHGLSLRSGYASISFVSNSL-------------------------------IT 140
L++G+++HG ++R G V+N+L IT
Sbjct: 300 VLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMIT 359
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
YM G A+ ++AN N+++YNAL++GF N K ++F MLQ G FS
Sbjct: 360 AYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGVELTDFS 419
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF---- 256
+ + + + +H +K P I ++ M + + + +F
Sbjct: 420 LTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQWP 479
Query: 257 -RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
L K S +I ++ K+ F + E + D+ + ILA C
Sbjct: 480 SNLDSSKATTS---IIGGYARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGF 536
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
G QIH + + + D+ + N+L++MYAKC A K+F+ M ++ISWN++I+
Sbjct: 537 REMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISC 596
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH--SGMVRKGDLYFNSMEAAYGI 433
+ G+ A+ ++ +M + +KPD +T T ++ A + S + F SM+ Y I
Sbjct: 597 YILQRNGDEALALWSRMNEKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDI 656
Query: 434 APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAK 493
P H++ + +LG G L E E+ IN + VL +LL +CR+H N ++ +R+AK
Sbjct: 657 EPTTEHYTAFVRVLGHWGLLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAK 716
Query: 494 LLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
L+L P T S Y+L SN+Y++ G W+ R+ ++ G RK P +W+
Sbjct: 717 LILSTKPETPSEYILKSNIYSASGFWHRSEMIREEMRERGYRKHPAKSWI 766
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 136/559 (24%), Positives = 256/559 (45%), Gaps = 57/559 (10%)
Query: 17 MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYD 76
+T +HA+ LK+ + + N L++ Y+K G A VF +S VS++A+ISG+
Sbjct: 98 VTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFVSLSSPTVVSYTALISGFS 156
Query: 77 QCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
+ AL +F +M+ V PNE+ F + L+AC + G QIHGL ++SG+ +
Sbjct: 157 RLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSV 216
Query: 133 FVSNSLITMYMK--CGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
FVSNSL+++Y K C D L ++ + S+N ++S V+ + K F++F M
Sbjct: 217 FVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVVSSLVKEGKSHKAFDLFYEMN 276
Query: 191 Q-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ---- 245
+ EGF D F+ LL T+ G LH +A+++ L + N ++ Y++
Sbjct: 277 RVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGLMQELSVNNALIGFYSKFWDM 336
Query: 246 ---------------------------FNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD 278
F ++ V +F + +K+ I++N L+ F
Sbjct: 337 KKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFANVTEKNTITYNALMAGFCRNG 396
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
K+ F +M+ + DF+ S + +C + +QIH F + ++ +
Sbjct: 397 HGLKALKLFTDMLQR-GVELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQ 455
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNLIS---WNTMIAAFGNHGLGERAIEIFEQMKAE 395
AL++M +C + A ++F + NL S ++I + +GL ++A+ +F + E
Sbjct: 456 TALLDMCTRCERMADAEEMFDQWP-SNLDSSKATTSIIGGYARNGLPDKAVSLFHRTLCE 514
Query: 396 -GVKPDSVTFTGLLIACNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
+ D V+ T +L C G G ++ +++A Y ++G+ LI M +
Sbjct: 515 QKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFSDISLGN--SLISMYAKCCDS 572
Query: 454 SEVEEYINKFHHLNDPVVLGSLLSACRVHGN----MAIGERLAKLLLEVPPVTTSPYVLL 509
+ + N +D + SL+S + N +A+ R+ + ++ P + T V+
Sbjct: 573 DDAIKIFNTMRE-HDVISWNSLISCYILQRNGDEALALWSRMNEKEIK-PDIITLTLVIS 630
Query: 510 SNLYASDGMWNEVTSARKM 528
+ Y N+++S R +
Sbjct: 631 AFRYTES---NKLSSCRDL 646
>AT1G17630.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6064525-6066720 FORWARD
LENGTH=731
Length = 731
Score = 241 bits (615), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 165/617 (26%), Positives = 290/617 (47%), Gaps = 91/617 (14%)
Query: 11 QRCSKTMTFGLHAAVLKIGLQSHVFVSN----QLLNMYVKCGRVVLARKVFDGMSE---R 63
Q+C + +HA VL L +F S L+++Y + G ++ AR VF+ +S
Sbjct: 70 QQCRQ-----VHAQVL---LSDFIFRSGSLAANLISVYARLGLLLDARNVFETVSLVLLS 121
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIH 120
+ W++++ G + AL L+ M+ + + ++ L AC L + H
Sbjct: 122 DLRLWNSILKANVSHGLYENALELYRGMRQRGLTGDGYILPLILRACRYLGRFGLCRAFH 181
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
++ G V N L+T+Y K G+ DA +++ N +S+N +I GF + ++ E
Sbjct: 182 TQVIQIGLKENLHVVNELLTLYPKAGRMGDAYNLFVEMPVRNRMSWNVMIKGFSQEYDCE 241
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFR-----------TGMSLHCQAVKLAL 229
++F+ M +E F PD ++ +L + F +G ++ +A+ +
Sbjct: 242 SAVKIFEWMQREEFKPDEVTWTSVLSCHSQCGKFEDVLKYFHLMRMSGNAVSGEALAVFF 301
Query: 230 D-CTPLIG-----------------------NVIMSMYAQFNFIEEVVRVFRLIQDKDVI 265
C L N ++ +Y + +++ +FR I++K +
Sbjct: 302 SVCAELEALSIAEKVHGYVIKGGFEEYLPSRNALIHVYGKQGKVKDAEHLFRQIRNKGIE 361
Query: 266 SWNTLINAF---SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA-------- 314
SWN+LI +F D+ F +EM + C+++ + T+ S++ C
Sbjct: 362 SWNSLITSFVDAGKLDEALSLFSELEEMNHVCNVKANVVTWTSVIKGCNVQGRGDDSLEY 421
Query: 315 ---------------------------SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAK 347
+ G++IH + RT ++ V NALVNMYAK
Sbjct: 422 FRQMQFSKVLANSVTICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAK 481
Query: 348 CGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGL 407
CG + VF + ++LISWN++I +G HG E+A+ +F++M + G PD + +
Sbjct: 482 CGLLSEGSLVFEAIRDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAV 541
Query: 408 LIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN 467
L AC+H+G+V KG F SM +G+ P H++C++D+LGR G L E E +
Sbjct: 542 LSACSHAGLVEKGREIFYSMSKRFGLEPQQEHYACIVDLLGRVGFLKEASEIVKNMPMEP 601
Query: 468 DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARK 527
VLG+LL++CR+H N+ I E +A L + P T Y+LLSN+Y++ G W E + R
Sbjct: 602 KVCVLGALLNSCRMHKNVDIAEGIASQLSVLEPERTGSYMLLSNIYSAGGRWEESANVRA 661
Query: 528 MLKGSGLRKEPGYAWLK 544
+ K L+K G +W++
Sbjct: 662 LAKKKDLKKVSGSSWIE 678
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI +L C++ L H V++ + ++ V N L+NMY KCG + VF+ +
Sbjct: 436 TICCILSICAELPALNLGREIHGHVIRTSMSENILVQNALVNMYAKCGLLSEGSLVFEAI 495
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQ 117
+++ +SW+++I GY G AL +F +M P+ + LSAC+ + +G+
Sbjct: 496 RDKDLISWNSIIKGYGMHGFAEKALSMFDRMISSGFHPDGIALVAVLSACSHAGLVEKGR 555
Query: 118 QI-HGLSLRSG 127
+I + +S R G
Sbjct: 556 EIFYSMSKRFG 566
>AT1G43980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:16687637-16689502 REVERSE
LENGTH=621
Length = 621
Score = 240 bits (612), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 162/569 (28%), Positives = 278/569 (48%), Gaps = 55/569 (9%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG-------------- 59
S T+ +HA +L+ G + N+ L +Y K G V+ A ++FD
Sbjct: 19 SPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQLFDDIPDKNTITWNVCLK 78
Query: 60 -----------------MSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFV 99
M ER+ VSW+ MISG CG H + +F M+ + P EF
Sbjct: 79 GLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYGIRVFFDMQRWEIRPTEFT 138
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVS-NSLITMYMKCGQCSDALSVYANS 158
F+ S +R G+QIHG ++ SG + + V NS++ MY + G ALSV+
Sbjct: 139 FSILASLVTCVR---HGEQIHGNAICSGVSRYNLVVWNSVMDMYRRLGVFDYALSVFLTM 195
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
+ VS+N LI ++ E + F LM + PD ++ ++ ++L + G
Sbjct: 196 EDRDVVSWNCLILSCSDSGNKEVALDQFWLMREMEIQPDEYTVSMVVSICSDLRELSKGK 255
Query: 219 SLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS-HF 277
+K+ ++ + M+++ N +++ V++FR ++ D + N++I ++S H
Sbjct: 256 QALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFRELEKWDSVLCNSMIGSYSWHC 315
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL-HGKQIHAFLFRTRQYWDVG 336
+ LF M S+RPD FTF+S+L+S +A L HG +H+ + + D
Sbjct: 316 CGEDALRLFILAMTQ--SVRPDKFTFSSVLSSM--NAVMLDHGADVHSLVIKLGFDLDTA 371
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM-KAE 395
V +L+ MY K GS+ A VF+K ++LI WNT+I + ++ IF Q+ +
Sbjct: 372 VATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNSRAVESLAIFNQLLMNQ 431
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
+KPD VT G+L+AC ++G V +G F+SME A+G+ P H++C+I++L R G ++E
Sbjct: 432 SLKPDRVTLMGILVACCYAGFVNEGIQIFSSMEKAHGVNPGNEHYACIIELLCRVGMINE 491
Query: 456 VEEYINKF-----HHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
++ +K H+ +P++ SL G+ + E +AK +LE P ++ PY++L
Sbjct: 492 AKDIADKIPFEPSSHIWEPILCASL-----DLGDTRLAETVAKTMLESEPKSSFPYLVLI 546
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+Y W R + L+ G
Sbjct: 547 KIYEMTWRWENSVKLRYAMNEHKLKSAQG 575
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 87/392 (22%), Positives = 172/392 (43%), Gaps = 42/392 (10%)
Query: 94 LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS 153
+P+ F+ ++ ++ + +H L +G+ ++ N + +Y K G +AL
Sbjct: 1 MPSSLYFSRLVNRSLLSKSPTLAKIVHAQLLEAGFVRTTYWGNRCLQLYFKSGSVINALQ 60
Query: 154 VYANSVGTNSVSYNALISGFVEN-----------HEPEK--------------------G 182
++ + N++++N + G +N PE+ G
Sbjct: 61 LFDDIPDKNTITWNVCLKGLFKNGYLNNALDLFDEMPERDVVSWNTMISGLVSCGFHEYG 120
Query: 183 FEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL-IGNVIMS 241
VF M + P F+F L T + R G +H A+ + L + N +M
Sbjct: 121 IRVFFDMQRWEIRPTEFTFSILASLVTCV---RHGEQIHGNAICSGVSRYNLVVWNSVMD 177
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKE--MMNECSIRPD 299
MY + + + VF ++D+DV+SWN LI + S D G + + +M E I+PD
Sbjct: 178 MYRRLGVFDYALSVFLTMEDRDVVSWNCLILSCS---DSGNKEVALDQFWLMREMEIQPD 234
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
++T + +++ C+ GKQ A + + V A ++M++KC + + K+F
Sbjct: 235 EYTVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFR 294
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
++ + + N+MI ++ H GE A+ +F + V+PD TF+ +L + N +
Sbjct: 295 ELEKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAVMLDHG 354
Query: 420 GDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
D++ S+ G + + L++M + G
Sbjct: 355 ADVH--SLVIKLGFDLDTAVATSLMEMYFKTG 384
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 111/209 (53%), Gaps = 9/209 (4%)
Query: 5 TIGTLLQRCS--KTMTFGLHAAVL--KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ ++ CS + ++ G A L K+G S+ V ++M+ KC R+ + K+F +
Sbjct: 237 TVSMVVSICSDLRELSKGKQALALCIKMGFLSNSIVLGAGIDMFSKCNRLDDSVKLFREL 296
Query: 61 SERNTVSWSAMISGYDQ--CGEHWMALHLFSQMK-VLPNEFVFASTLSACASLRALVQGQ 117
+ ++V ++MI Y CGE + L + + + V P++F F+S LS+ ++ L G
Sbjct: 297 EKWDSVLCNSMIGSYSWHCCGEDALRLFILAMTQSVRPDKFTFSSVLSSMNAV-MLDHGA 355
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
+H L ++ G+ + V+ SL+ MY K G A+ V+A + G + + +N +I G N
Sbjct: 356 DVHSLVIKLGFDLDTAVATSLMEMYFKTGSVDLAMGVFAKTDGKDLIFWNTVIMGLARNS 415
Query: 178 EPEKGFEVF-KLMLQEGFVPDRFSFVGLL 205
+ +F +L++ + PDR + +G+L
Sbjct: 416 RAVESLAIFNQLLMNQSLKPDRVTLMGIL 444
>AT1G50270.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:18622044-18623834 FORWARD
LENGTH=596
Length = 596
Score = 239 bits (609), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 128/453 (28%), Positives = 229/453 (50%), Gaps = 3/453 (0%)
Query: 93 VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDAL 152
V+P+ F L A LR Q H ++ G S FV NSLI+ Y G A
Sbjct: 100 VIPSRHTFPPLLKAVFKLRD-SNPFQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFAS 158
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
++ + + V++ A+I GFV N + F M + G + + V +L + ++
Sbjct: 159 RLFDGAEDKDVVTWTAMIDGFVRNGSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVE 218
Query: 213 DFRTGMSLHCQAVKLA-LDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
D R G S+H ++ + C IG+ ++ MY + + ++ +VF + ++V++W LI
Sbjct: 219 DVRFGRSVHGLYLETGRVKCDVFIGSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALI 278
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
+ K L F+EM+ + P++ T +S+L++C + G+++H ++ +
Sbjct: 279 AGYVQSRCFDKGMLVFEEMLKS-DVAPNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSI 337
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQ 391
+ L+++Y KCG + A VF ++ +N+ +W MI F HG A ++F
Sbjct: 338 EINTTAGTTLIDLYVKCGCLEEAILVFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYT 397
Query: 392 MKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
M + V P+ VTF +L AC H G+V +G F SM+ + + P H++C++D+ GR G
Sbjct: 398 MLSSHVSPNEVTFMAVLSACAHGGLVEEGRRLFLSMKGRFNMEPKADHYACMVDLFGRKG 457
Query: 452 RLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSN 511
L E + I + VV G+L +C +H + +G+ A ++++ P + Y LL+N
Sbjct: 458 LLEEAKALIERMPMEPTNVVWGALFGSCLLHKDYELGKYAASRVIKLQPSHSGRYTLLAN 517
Query: 512 LYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
LY+ W+EV RK +K + K PG++W++
Sbjct: 518 LYSESQNWDEVARVRKQMKDQQVVKSPGFSWIE 550
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/397 (27%), Positives = 186/397 (46%), Gaps = 38/397 (9%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
F HA ++K GL S FV N L++ Y G A ++FDG +++ V+W+AMI G+ +
Sbjct: 123 FQFHAHIVKFGLDSDPFVRNSLISGYSSSGLFDFASRLFDGAEDKDVVTWTAMIDGFVRN 182
Query: 79 GEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS-FV 134
G A+ F +MK V NE S L A + + G+ +HGL L +G F+
Sbjct: 183 GSASEAMVYFVEMKKTGVAANEMTVVSVLKAAGKVEDVRFGRSVHGLYLETGRVKCDVFI 242
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
+SL+ MY KC DA V+ N V++ ALI+G+V++ +KG VF+ ML+
Sbjct: 243 GSSLVDMYGKCSCYDDAQKVFDEMPSRNVVTWTALIAGYVQSRCFDKGMLVFEEMLKSDV 302
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR 254
P+ + +L ++ G +HC +K +++ G ++ +Y + +EE +
Sbjct: 303 APNEKTLSSVLSACAHVGALHRGRRVHCYMIKNSIEINTTAGTTLIDLYVKCGCLEEAIL 362
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
VF + +K+V +W +IN F+ +F F M++ + P++ TF ++L++C
Sbjct: 363 VFERLHEKNVYTWTAMINGFAAHGYARDAFDLFYTMLSS-HVSPNEVTFMAVLSACAHGG 421
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
G+++ FL ++ NM K + M+
Sbjct: 422 LVEEGRRL--FLSMKGRF----------NMEPKAD------------------HYACMVD 451
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
FG GL E A + E+M E P +V + L +C
Sbjct: 452 LFGRKGLLEEAKALIERMPME---PTNVVWGALFGSC 485
>AT2G42920.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:17858705-17860384 FORWARD
LENGTH=559
Length = 559
Score = 238 bits (607), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 149/472 (31%), Positives = 230/472 (48%), Gaps = 44/472 (9%)
Query: 105 SACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD---ALSVYANSVGT 161
+ C+++R L +QIH +++G S + ++ ++ C SD A V+
Sbjct: 33 TQCSTMREL---KQIHASLIKTGLISDTVTASRVLAFC--CASPSDMNYAYLVFTRINHK 87
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLML--QEGFVPDRFSFVGLLGFSTNLDDFRTGMS 219
N +N +I GF + PE +F ML P R ++ + L R G
Sbjct: 88 NPFVWNTIIRGFSRSSFPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQ 147
Query: 220 LHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--F 277
LH +K L+ I N ++ MY + E R+F + DV++WN++I F+
Sbjct: 148 LHGMVIKEGLEDDSFIRNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGL 207
Query: 278 DDQGKSFLFFKEM------------------------------MNECSIRPDDFTFASIL 307
DQ ++ F EM M E ++PD FT S+L
Sbjct: 208 IDQAQNL--FDEMPQRNGVSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLL 265
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI 367
+C + + G+ IH ++ R R + V AL++MY KCG I VF + L
Sbjct: 266 NACAYLGASEQGRWIHEYIVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLS 325
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
WN+MI N+G ERA+++F +++ G++PDSV+F G+L AC HSG V + D +F M
Sbjct: 326 CWNSMILGLANNGFEERAMDLFSELERSGLEPDSVSFIGVLTACAHSGEVHRADEFFRLM 385
Query: 428 EAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAI 487
+ Y I P+I H++ ++++LG AG L E E I D V+ SLLSACR GN+ +
Sbjct: 386 KEKYMIEPSIKHYTLMVNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEM 445
Query: 488 GERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+R AK L ++ P T YVLLSN YAS G++ E R ++K + KE G
Sbjct: 446 AKRAAKCLKKLDPDETCGYVLLSNAYASYGLFEEAVEQRLLMKERQMEKEVG 497
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/418 (21%), Positives = 181/418 (43%), Gaps = 45/418 (10%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKC-GRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+HA+++K GL S ++++L + A VF ++ +N W+ +I G+ +
Sbjct: 44 IHASLIKTGLISDTVTASRVLAFCCASPSDMNYAYLVFTRINHKNPFVWNTIIRGFSRSS 103
Query: 80 EHWMALHLFSQM-----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
MA+ +F M V P + S A L G+Q+HG+ ++ G SF+
Sbjct: 104 FPEMAISIFIDMLCSSPSVKPQRLTYPSVFKAYGRLGQARDGRQLHGMVIKEGLEDDSFI 163
Query: 135 SNSLITMYMKCGQCSDALSVYANSVG-------------------------------TNS 163
N+++ MY+ CG +A ++ +G N
Sbjct: 164 RNTMLHMYVTCGCLIEAWRIFLGMIGFDVVAWNSMIMGFAKCGLIDQAQNLFDEMPQRNG 223
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
VS+N++ISGFV N + ++F+ M ++ PD F+ V LL L G +H
Sbjct: 224 VSWNSMISGFVRNGRFKDALDMFREMQEKDVKPDGFTMVSLLNACAYLGASEQGRWIHEY 283
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
V+ + ++ ++ MY + IEE + VF K + WN++I ++ + ++
Sbjct: 284 IVRNRFELNSIVVTALIDMYCKCGCIEEGLNVFECAPKKQLSCWNSMILGLANNGFEERA 343
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV--HNAL 341
F E + + PD +F +L +C H+ +H L + + + + + +
Sbjct: 344 MDLFSE-LERSGLEPDSVSFIGVLTACA-HSGEVHRADEFFRLMKEKYMIEPSIKHYTLM 401
Query: 342 VNMYAKCGSIGYAHKVFSKMSY-RNLISWNTMIAA---FGNHGLGERAIEIFEQMKAE 395
VN+ G + A + M + + W+++++A GN + +RA + +++ +
Sbjct: 402 VNVLGGAGLLEEAEALIKNMPVEEDTVIWSSLLSACRKIGNVEMAKRAAKCLKKLDPD 459
>AT1G05750.1 | Symbols: PDE247, CLB19 | Tetratricopeptide repeat
(TPR)-like superfamily protein | chr1:1721523-1723025
FORWARD LENGTH=500
Length = 500
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 135/422 (31%), Positives = 223/422 (52%), Gaps = 42/422 (9%)
Query: 158 SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTG 217
S +VS+ + I+ N + + F M G P+ +F+ LL + DF +G
Sbjct: 31 STSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALL---SGCGDFTSG 87
Query: 218 MS-----LHCQAVKLALDCT-PLIGNVIMSMYAQ----------FNFIEE---------- 251
LH A KL LD ++G I+ MY++ F+++E+
Sbjct: 88 SEALGDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMI 147
Query: 252 -----------VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
++F + ++D+ISW +IN F Q ++ L+F+EM ++PD
Sbjct: 148 DGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQIS-GVKPDY 206
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+ L +CT + G +H ++ +V V N+L+++Y +CG + +A +VF
Sbjct: 207 VAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYN 266
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
M R ++SWN++I F +G ++ F +M+ +G KPD+VTFTG L AC+H G+V +G
Sbjct: 267 MEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEG 326
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACR 480
YF M+ Y I+P I H+ CL+D+ RAGRL + + + + VV+GSLL+AC
Sbjct: 327 LRYFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACS 386
Query: 481 VHG-NMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
HG N+ + ERL K L ++ + S YV+LSN+YA+DG W + R+ +KG GL+K+PG
Sbjct: 387 NHGNNIVLAERLMKHLTDLNVKSHSNYVILSNMYAADGKWEGASKMRRKMKGLGLKKQPG 446
Query: 540 YA 541
++
Sbjct: 447 FS 448
Score = 108 bits (271), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 153/332 (46%), Gaps = 47/332 (14%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VL 94
N +++ Y++ G+V A K+FD M ER+ +SW+AMI+G+ + G AL F +M+ V
Sbjct: 144 NTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVK 203
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
P+ + L+AC +L AL G +H L + + VSNSLI +Y +CG A V
Sbjct: 204 PDYVAIIAALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQV 263
Query: 155 YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF 214
+ N VS+N++I GF N + F+ M ++GF PD +F G L +++
Sbjct: 264 FYNMEKRTVVSWNSVIVGFAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLV 323
Query: 215 RTGMSLHCQAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
G+ + Q +K +P I + ++ +Y++ +E+ ++
Sbjct: 324 EEGLR-YFQIMKCDYRISPRIEHYGCLVDLYSRAGRLEDALK------------------ 364
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
++ ++P++ S+LA+C+ H + + + L +
Sbjct: 365 -----------------LVQSMPMKPNEVVIGSLLAACSNHGNNI---VLAERLMKHLTD 404
Query: 333 WDVGVHNALV---NMYAKCGSIGYAHKVFSKM 361
+V H+ V NMYA G A K+ KM
Sbjct: 405 LNVKSHSNYVILSNMYAADGKWEGASKMRRKM 436
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 160/373 (42%), Gaps = 50/373 (13%)
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQ-- 115
+ TVSW++ I+ + G A FS M V PN F + LS C + +
Sbjct: 32 TSETTVSWTSRINLLTRNGRLAEAAKEFSDMTLAGVEPNHITFIALLSGCGDFTSGSEAL 91
Query: 116 GQQIHGLSLR---------SGYASISFVS-----------------------NSLITMYM 143
G +HG + + G A I S N++I YM
Sbjct: 92 GDLLHGYACKLGLDRNHVMVGTAIIGMYSKRGRFKKARLVFDYMEDKNSVTWNTMIDGYM 151
Query: 144 KCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVG 203
+ GQ +A ++ + +S+ A+I+GFV+ E+ F+ M G PD + +
Sbjct: 152 RSGQVDNAAKMFDKMPERDLISWTAMINGFVKKGYQEEALLWFREMQISGVKPDYVAIIA 211
Query: 204 LLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKD 263
L TNL G+ +H + + N ++ +Y + +E +VF ++ +
Sbjct: 212 ALNACTNLGALSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRT 271
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGK--- 320
V+SWN++I F+ + +S ++F++ M E +PD TF L +C+ H +
Sbjct: 272 VVSWNSVIVGFAANGNAHESLVYFRK-MQEKGFKPDAVTFTGALTACS-HVGLVEEGLRY 329
Query: 321 -QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGN 378
QI +R + + LV++Y++ G + A K+ M + N + +++AA N
Sbjct: 330 FQIMKCDYRISPR--IEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAACSN 387
Query: 379 HG----LGERAIE 387
HG L ER ++
Sbjct: 388 HGNNIVLAERLMK 400
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/169 (28%), Positives = 88/169 (52%), Gaps = 10/169 (5%)
Query: 17 MTFGL--HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISG 74
++FGL H VL +++V VSN L+++Y +CG V AR+VF M +R VSW+++I G
Sbjct: 222 LSFGLWVHRYVLSQDFKNNVRVSNSLIDLYCRCGCVEFARQVFYNMEKRTVVSWNSVIVG 281
Query: 75 YDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASI 131
+ G +L F +M+ P+ F L+AC+ + + +G + + ++ Y
Sbjct: 282 FAANGNAHESLVYFRKMQEKGFKPDAVTFTGALTACSHVGLVEEGLRYFQI-MKCDYRIS 340
Query: 132 SFVSN--SLITMYMKCGQCSDALS-VYANSVGTNSVSYNALISGFVENH 177
+ + L+ +Y + G+ DAL V + + N V +L++ NH
Sbjct: 341 PRIEHYGCLVDLYSRAGRLEDALKLVQSMPMKPNEVVIGSLLAA-CSNH 388
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 96/257 (37%), Gaps = 44/257 (17%)
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
P++G ++ N ++ + +SW + IN + ++ F +M
Sbjct: 5 PVVGITSPALITHKNHANPKIQRHNQSTSETTVSWTSRINLLTRNGRLAEAAKEFSDM-T 63
Query: 293 ECSIRPDDFTFASILASCTWHAS-------FLHGKQIHAFLFRTRQYWDVGVHNALVNMY 345
+ P+ TF ++L+ C S LHG L R V V A++ MY
Sbjct: 64 LAGVEPNHITFIALLSGCGDFTSGSEALGDLLHGYACKLGLDRNH----VMVGTAIIGMY 119
Query: 346 AKCGSIGYAHKVFSKMSYRNLISWNTMIA------------------------------- 374
+K G A VF M +N ++WNTMI
Sbjct: 120 SKRGRFKKARLVFDYMEDKNSVTWNTMIDGYMRSGQVDNAAKMFDKMPERDLISWTAMIN 179
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
F G E A+ F +M+ GVKPD V L AC + G + G L+ + +
Sbjct: 180 GFVKKGYQEEALLWFREMQISGVKPDYVAIIAALNACTNLGALSFG-LWVHRYVLSQDFK 238
Query: 435 PNIGHFSCLIDMLGRAG 451
N+ + LID+ R G
Sbjct: 239 NNVRVSNSLIDLYCRCG 255
>AT5G06540.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:1999181-2001049 REVERSE
LENGTH=622
Length = 622
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 145/484 (29%), Positives = 241/484 (49%), Gaps = 52/484 (10%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD------------- 150
L +C+S L + IHG LR+ S FV++ L+ + C D
Sbjct: 19 LQSCSSFSDL---KIIHGFLLRTHLISDVFVASRLLAL------CVDDSTFNKPTNLLGY 69
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
A +++ N +N LI F EP K F + ML+ PD +F L+ S+
Sbjct: 70 AYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSE 129
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
++ G H Q V+ + N ++ MYA FI R+F + +DV+SW ++
Sbjct: 130 MECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSM 189
Query: 271 I----------NAFSHFDDQGKSFLFFKEMM------NECSIRPDD-FTF---------- 303
+ NA FD+ LF +M N C + D F F
Sbjct: 190 VAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANE 249
Query: 304 ---ASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
S+++SC + G++ + ++ ++ ++ + ALV+M+ +CG I A VF
Sbjct: 250 TVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEG 309
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+ + +SW+++I HG +A+ F QM + G P VTFT +L AC+H G+V KG
Sbjct: 310 LPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKG 369
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACR 480
+ +M+ +GI P + H+ C++DMLGRAG+L+E E +I K H + +LG+LL AC+
Sbjct: 370 LEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACK 429
Query: 481 VHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGY 540
++ N + ER+ +L++V P + YVLLSN+YA G W+++ S R M+K ++K PG+
Sbjct: 430 IYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKKPPGW 489
Query: 541 AWLK 544
+ ++
Sbjct: 490 SLIE 493
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 94/440 (21%), Positives = 188/440 (42%), Gaps = 58/440 (13%)
Query: 8 TLLQRCSKTMTFGL-HAAVLKIGLQSHVFVSNQLLNMYVK-------CGRVVLARKVFDG 59
LLQ CS + H +L+ L S VFV+++LL + V + A +F
Sbjct: 17 ALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYAYGIFSQ 76
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ N ++ +I + E A ++QM ++ P+ F + A + + ++ G
Sbjct: 77 IQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMECVLVG 136
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYM-------------------------------KC 145
+Q H +R G+ + +V NSL+ MY KC
Sbjct: 137 EQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKC 196
Query: 146 GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
G +A ++ N +++ +I+G+ +N+ EK ++F+ M +EG V + V ++
Sbjct: 197 GMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVMVSVI 256
Query: 206 GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVI 265
+L G + VK + ++G ++ M+ + IE+ + VF + + D +
Sbjct: 257 SSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFEGLPETDSL 316
Query: 266 SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAF 325
SW+++I + K+ +F +M++ I P D TF ++L++C+ G +I+
Sbjct: 317 SWSSIIKGLAVHGHAHKAMHYFSQMISLGFI-PRDVTFTAVLSACSHGGLVEKGLEIYEN 375
Query: 326 LFRTRQYWDVGV------HNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAA--- 375
+ + D G+ + +V+M + G + A KM + N ++ A
Sbjct: 376 MKK-----DHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKMHVKPNAPILGALLGACKI 430
Query: 376 FGNHGLGERAIEIFEQMKAE 395
+ N + ER + ++K E
Sbjct: 431 YKNTEVAERVGNMLIKVKPE 450
>AT4G16470.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:9287862-9289541 REVERSE
LENGTH=501
Length = 501
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/363 (33%), Positives = 201/363 (55%), Gaps = 5/363 (1%)
Query: 184 EVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMY 243
E L+ G + ++ LL ++ G +H Q + + ++ +Y
Sbjct: 94 EAVGLLWSSGLQVEPETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILY 153
Query: 244 AQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--FDDQGKSFLFFKEMMNECSIRPDDF 301
A ++ +FR ++ +D+I WN +I+ + + +G LF M + I PD +
Sbjct: 154 ALSGDLQTAGILFRSLKIRDLIPWNAMISGYVQKGLEQEG---LFIYYDMRQNRIVPDQY 210
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
TFAS+ +C+ HGK+ HA + + ++ V +ALV+MY KC S H+VF ++
Sbjct: 211 TFASVFRACSALDRLEHGKRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQL 270
Query: 362 SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
S RN+I+W ++I+ +G HG ++ FE+MK EG +P+ VTF +L ACNH G+V KG
Sbjct: 271 STRNVITWTSLISGYGYHGKVSEVLKCFEKMKEEGCRPNPVTFLVVLTACNHGGLVDKGW 330
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRV 481
+F SM+ YGI P H++ ++D LGRAGRL E E++ K P V GSLL ACR+
Sbjct: 331 EHFYSMKRDYGIEPEGQHYAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRI 390
Query: 482 HGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
HGN+ + E A LE+ P YV+ +N YAS G+ + R+ ++ +G++K+PGY+
Sbjct: 391 HGNVKLLELAATKFLELDPTNGGNYVVFANGYASCGLREAASKVRRKMENAGVKKDPGYS 450
Query: 542 WLK 544
++
Sbjct: 451 QIE 453
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 109/209 (52%), Gaps = 7/209 (3%)
Query: 4 ETIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
ET LLQ C + + +HA + +G + ++ +LL +Y G + A +F
Sbjct: 109 ETYAVLLQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRS 168
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQG 116
+ R+ + W+AMISGY Q G L ++ M +++P+++ FAS AC++L L G
Sbjct: 169 LKIRDLIPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHG 228
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
++ H + ++ S V ++L+ MY KC SD V+ N +++ +LISG+ +
Sbjct: 229 KRAHAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYH 288
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
+ + + F+ M +EG P+ +F+ +L
Sbjct: 289 GKVSEVLKCFEKMKEEGCRPNPVTFLVVL 317
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 149/344 (43%), Gaps = 20/344 (5%)
Query: 49 RVVLARKV---FDGMSERNTVSWSAMISGYDQCGEHWMALHLF--SQMKVLPNEFVFAST 103
R +LA K F ++R T + G G A+ L S ++V P +A
Sbjct: 57 RRMLAEKRIGRFQVENQRKTEKLDKTLKGLCVTGRLKEAVGLLWSSGLQVEPE--TYAVL 114
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNS 163
L C + +G++IH G+A ++ L+ +Y G A ++ + +
Sbjct: 115 LQECKQRKEYTKGKRIHAQMFVVGFALNEYLKVKLLILYALSGDLQTAGILFRSLKIRDL 174
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
+ +NA+ISG+V+ ++G ++ M Q VPD+++F + + LD G H
Sbjct: 175 IPWNAMISGYVQKGLEQEGLFIYYDMRQNRIVPDQYTFASVFRACSALDRLEHGKRAHAV 234
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
+K + ++ + ++ MY + + + RVF + ++VI+W +LI+ + + +
Sbjct: 235 MIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKVSEV 294
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV------ 337
F E M E RP+ TF +L +C H + H + + D G+
Sbjct: 295 LKCF-EKMKEEGCRPNPVTFLVVLTACN-HGGLVDKGWEHFYSMKR----DYGIEPEGQH 348
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLIS-WNTMIAAFGNHG 380
+ A+V+ + G + A++ K + W +++ A HG
Sbjct: 349 YAAMVDTLGRAGRLQEAYEFVMKSPCKEHPPVWGSLLGACRIHG 392
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
HA ++K ++S++ V + L++MY KC +VFD +S RN ++W+++ISGY G+
Sbjct: 232 HAVMIKRCIKSNIIVDSALVDMYFKCSSFSDGHRVFDQLSTRNVITWTSLISGYGYHGKV 291
Query: 82 WMALHLFSQMK---VLPNEFVFASTLSAC 107
L F +MK PN F L+AC
Sbjct: 292 SEVLKCFEKMKEEGCRPNPVTFLVVLTAC 320
>AT4G15720.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:8949569-8951419 FORWARD
LENGTH=616
Length = 616
Score = 237 bits (604), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 135/432 (31%), Positives = 236/432 (54%), Gaps = 6/432 (1%)
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
+H L+L+ G+AS +F N L+ Y+K + + A ++ N VS+ ++ISG+ + +
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 179 PEKGFEVFKLMLQEGFVP-DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
P+ +F+ M ++ VP + ++F + + L + R G ++H + L ++ +
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 238 VIMSMYAQFNFIEEVVRVFRLI--QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNE-C 294
++ MY + N +E RVF + ++V+SW ++I A++ ++ F+
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFRSFNAALT 230
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
S R + F AS++++C+ GK H + R + V +L++MYAKCGS+ A
Sbjct: 231 SDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSCA 290
Query: 355 HKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
K+F ++ ++IS+ +MI A HGLGE A+++F++M A + P+ VT G+L AC+HS
Sbjct: 291 EKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMVAGRINPNYVTLLGVLHACSHS 350
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH--HLNDPVVL 472
G+V +G Y + M YG+ P+ H++C++DMLGR GR+ E E ++
Sbjct: 351 GLVNEGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQGALLW 410
Query: 473 GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGS 532
G+LLSA R+HG + I +K L++ TS Y+ LSN YA G W + S R +K S
Sbjct: 411 GALLSAGRLHGRVEIVSEASKRLIQSNQQVTSAYIALSNAYAVSGGWEDSESLRLEMKRS 470
Query: 533 GLRKEPGYAWLK 544
G KE +W++
Sbjct: 471 GNVKERACSWIE 482
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/378 (26%), Positives = 177/378 (46%), Gaps = 19/378 (5%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH LK+G S F N L+ YVK + ARK+FD M E N VSW+++ISGY+ G+
Sbjct: 51 LHTLTLKLGFASDTFTVNHLVISYVKLKEINTARKLFDEMCEPNVVSWTSVISGYNDMGK 110
Query: 81 HWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
AL +F +M V PNE+ FAS AC++L G+ IH SG VS+
Sbjct: 111 PQNALSMFQKMHEDRPVPPNEYTFASVFKACSALAESRIGKNIHARLEISGLRRNIVVSS 170
Query: 137 SLITMYMKCGQCSDALSVYANSV--GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
SL+ MY KC A V+ + + G N VS+ ++I+ + +N + E+F+
Sbjct: 171 SLVDMYGKCNDVETARRVFDSMIGYGRNVVSWTSMITAYAQNARGHEAIELFR-SFNAAL 229
Query: 195 VPDR---FSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEE 251
DR F ++ ++L + G H + + ++ ++ MYA+ +
Sbjct: 230 TSDRANQFMLASVISACSSLGRLQWGKVAHGLVTRGGYESNTVVATSLLDMYAKCGSLSC 289
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
++F I+ VIS+ ++I A + + F EM+ I P+ T +L +C+
Sbjct: 290 AEKIFLRIRCHSVISYTSMIMAKAKHGLGEAAVKLFDEMV-AGRINPNYVTLLGVLHACS 348
Query: 312 WHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNMYAKCGSIGYAHKVFSKM---SYRN 365
H+ ++ + + +Y D + +V+M + G + A+++ + + +
Sbjct: 349 -HSGLVN-EGLEYLSLMAEKYGVVPDSRHYTCVVDMLGRFGRVDEAYELAKTIEVGAEQG 406
Query: 366 LISWNTMIAAFGNHGLGE 383
+ W +++A HG E
Sbjct: 407 ALLWGALLSAGRLHGRVE 424
>AT3G08820.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2677122-2679179 REVERSE
LENGTH=685
Length = 685
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 137/546 (25%), Positives = 272/546 (49%), Gaps = 5/546 (0%)
Query: 3 LETIGTLLQ-RCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS 61
++ I TL+ C+ +H +++ L F+ N LL + + + +F
Sbjct: 13 VQQIKTLISVACTVNHLKQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQ 72
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQ 118
N ++++I+G+ L LF ++ + + F F L AC + G
Sbjct: 73 FPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGID 132
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
+H L ++ G+ SL+++Y G+ +DA ++ + V++ AL SG+ +
Sbjct: 133 LHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGR 192
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ ++FK M++ G PD + V +L ++ D +G + ++ + +
Sbjct: 193 HREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTT 252
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
++++YA+ +E+ VF + +KD+++W+T+I ++ + F +M+ E +++P
Sbjct: 253 LVNLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQE-NLKP 311
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D F+ L+SC + G+ + + R ++ + NAL++MYAKCG++ +VF
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVF 371
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
+M ++++ N I+ +G + + +F Q + G+ PD TF GLL C H+G+++
Sbjct: 372 KEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQ 431
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
G +FN++ Y + + H+ C++D+ GRAG L + I + +V G+LLS
Sbjct: 432 DGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSG 491
Query: 479 CRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEP 538
CR+ + + E + K L+ + P YV LSN+Y+ G W+E R M+ G++K P
Sbjct: 492 CRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIP 551
Query: 539 GYAWLK 544
GY+W++
Sbjct: 552 GYSWIE 557
>AT1G31920.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11461864-11463684 REVERSE
LENGTH=606
Length = 606
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 124/391 (31%), Positives = 206/391 (52%)
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
A S++ + +N +I G+V E+ + M+Q G PD F++ LL T
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
L R G +H Q KL L+ + N +++MY + +E VF ++ K SW+++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
++A + + L F+ M +E +++ ++ S L +C + G IH FL R
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
++ V +LV+MY KCG + A +F KM RN ++++ MI+ HG GE A+ +F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
+M EG++PD V + +L AC+HSG+V++G F M + P H+ CL+D+LGRA
Sbjct: 325 KMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGRA 384
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLS 510
G L E E I + V+ + LS CRV N+ +G+ A+ LL++ Y+L+S
Sbjct: 385 GLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLSSHNPGDYLLIS 444
Query: 511 NLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
NLY+ MW++V R + GL++ PG++
Sbjct: 445 NLYSQGQMWDDVARTRTEIAIKGLKQTPGFS 475
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 150/315 (47%), Gaps = 10/315 (3%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T LL+ C++ + +H V K+GL++ VFV N L+NMY +CG + L+ VF+ +
Sbjct: 134 TYPCLLKACTRLKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKL 193
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLF----SQMKVLPNEFVFASTLSACASLRALVQG 116
+ SWS+M+S G L LF S+ + E S L ACA+ AL G
Sbjct: 194 ESKTAASWSSMVSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLG 253
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
IHG LR+ V SL+ MY+KCG AL ++ N+++Y+A+ISG +
Sbjct: 254 MSIHGFLLRNISELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALH 313
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA-LDCTPLI 235
E E +F M++EG PD +V +L ++ + G + + +K ++ T
Sbjct: 314 GEGESALRMFSKMIKEGLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEH 373
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
++ + + +EE + + I +K+ + W T ++ + + +E++
Sbjct: 374 YGCLVDLLGRAGLLEEALETIQSIPIEKNDVIWRTFLSQCRVRQNIELGQIAAQELLKLS 433
Query: 295 SIRPDDFTFASILAS 309
S P D+ S L S
Sbjct: 434 SHNPGDYLLISNLYS 448
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/328 (20%), Positives = 151/328 (46%), Gaps = 7/328 (2%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACAS 109
A +F G+ + T ++ MI GY AL +++M P+ F + L AC
Sbjct: 85 AASIFRGIDDPCTFDFNTMIRGYVNVMSFEEALCFYNEMMQRGNEPDNFTYPCLLKACTR 144
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
L+++ +G+QIHG + G + FV NSLI MY +CG+ + +V+ + S++++
Sbjct: 145 LKSIREGKQIHGQVFKLGLEADVFVQNSLINMYGRCGEMELSSAVFEKLESKTAASWSSM 204
Query: 170 ISGFVENHEPEKGFEVFKLMLQE-GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA 228
+S + +F+ M E + V L N GMS+H ++
Sbjct: 205 VSARAGMGMWSECLLLFRGMCSETNLKAEESGMVSALLACANTGALNLGMSIHGFLLRNI 264
Query: 229 LDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
+ ++ ++ MY + +++ + +F+ ++ ++ ++++ +I+ + + + F
Sbjct: 265 SELNIIVQTSLVDMYVKCGCLDKALHIFQKMEKRNNLTYSAMISGLALHGEGESALRMFS 324
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH-NALVNMYAK 347
+M+ E + PD + S+L +C+ G+++ A + + + H LV++ +
Sbjct: 325 KMIKE-GLEPDHVVYVSVLNACSHSGLVKEGRRVFAEMLKEGKVEPTAEHYGCLVDLLGR 383
Query: 348 CGSIGYAHKVFSKMSY-RNLISWNTMIA 374
G + A + + +N + W T ++
Sbjct: 384 AGLLEEALETIQSIPIEKNDVIWRTFLS 411
>AT5G44230.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17814336-17816309 FORWARD
LENGTH=657
Length = 657
Score = 236 bits (602), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 145/485 (29%), Positives = 232/485 (47%), Gaps = 39/485 (8%)
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD--ALS 153
E + +S +S L Q +QIHG LR G ++ LI K G D A
Sbjct: 45 KELLVSSLISKLDDCINLNQIKQIHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARR 104
Query: 154 VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDD 213
V N + A+I G+ + ++ ++ M +E P F+F LL + D
Sbjct: 105 VIEPVQFRNPFLWTAVIRGYAIEGKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKD 164
Query: 214 FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINA 273
G H Q +L C +GN ++ MY + I+ +VF + ++DVISW LI A
Sbjct: 165 LNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAA 224
Query: 274 FSHFDD------------------------------QGKSFLFFKEMMNECSIRPDDFTF 303
++ + + + L + + M + IR D+ T
Sbjct: 225 YARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTV 284
Query: 304 ASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH----NALVNMYAKCGSIGYAHKVFS 359
A +++C + + + A + + H +AL++MY+KCG++ A VF
Sbjct: 285 AGYISACAQLGASKYADR--AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFM 342
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVR 418
M+ +N+ ++++MI HG + A+ +F M + +KP++VTF G L+AC+HSG+V
Sbjct: 343 SMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVD 402
Query: 419 KGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
+G F+SM +G+ P H++C++D+LGR GRL E E I V G+LL A
Sbjct: 403 QGRQVFDSMYQTFGVQPTRDHYTCMVDLLGRTGRLQEALELIKTMSVEPHGGVWGALLGA 462
Query: 479 CRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEP 538
CR+H N I E A+ L E+ P Y+LLSN+YAS G W V RK++K GL+K P
Sbjct: 463 CRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTP 522
Query: 539 GYAWL 543
+W+
Sbjct: 523 AVSWV 527
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 175/386 (45%), Gaps = 49/386 (12%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVV--LARKVFDGMSERNTVSWSAMISGYDQC 78
+H VL+ GL ++ +L+ K G + AR+V + + RN W+A+I GY
Sbjct: 68 IHGHVLRKGLDQSCYILTKLIRTLTKLGVPMDPYARRVIEPVQFRNPFLWTAVIRGYAIE 127
Query: 79 GEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
G+ A+ ++ M+ + P F F++ L AC +++ L G+Q H + R +V
Sbjct: 128 GKFDEAIAMYGCMRKEEITPVSFTFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVG 187
Query: 136 NSLITMYMKC-------------------------------GQCSDALSVYANSVGTNSV 164
N++I MY+KC G A ++ + + V
Sbjct: 188 NTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKDMV 247
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHC-Q 223
++ A+++GF +N +P++ E F M + G D + G + L G S + +
Sbjct: 248 AWTAMVTGFAQNAKPQEALEYFDRMEKSGIRADEVTVAGYISACAQL-----GASKYADR 302
Query: 224 AVKLALDC--TP----LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF 277
AV++A +P +IG+ ++ MY++ +EE V VF + +K+V +++++I +
Sbjct: 303 AVQIAQKSGYSPSDHVVIGSALIDMYSKCGNVEEAVNVFMSMNNKNVFTYSSMILGLATH 362
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
++ F M+ + I+P+ TF L +C+ G+Q+ +++T
Sbjct: 363 GRAQEALHLFHYMVTQTEIKPNTVTFVGALMACSHSGLVDQGRQVFDSMYQTFGVQPTRD 422
Query: 338 H-NALVNMYAKCGSIGYAHKVFSKMS 362
H +V++ + G + A ++ MS
Sbjct: 423 HYTCMVDLLGRTGRLQEALELIKTMS 448
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 112/242 (46%), Gaps = 41/242 (16%)
Query: 5 TIGTLLQRCS--KTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T LL+ C K + G HA ++ V+V N +++MYVKC + ARKVFD M
Sbjct: 151 TFSALLKACGTMKDLNLGRQFHAQTFRLRGFCFVYVGNTMIDMYVKCESIDCARKVFDEM 210
Query: 61 SERNTVS-------------------------------WSAMISGYDQCGEHWMALHLFS 89
ER+ +S W+AM++G+ Q + AL F
Sbjct: 211 PERDVISWTELIAAYARVGNMECAAELFESLPTKDMVAWTAMVTGFAQNAKPQEALEYFD 270
Query: 90 QMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV--SNSLITMYMK 144
+M+ + +E A +SACA L A + ++ +SGY+ V ++LI MY K
Sbjct: 271 RMEKSGIRADEVTVAGYISACAQLGASKYADRAVQIAQKSGYSPSDHVVIGSALIDMYSK 330
Query: 145 CGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML-QEGFVPDRFSFVG 203
CG +A++V+ + N +Y+++I G + ++ +F M+ Q P+ +FVG
Sbjct: 331 CGNVEEAVNVFMSMNNKNVFTYSSMILGLATHGRAQEALHLFHYMVTQTEIKPNTVTFVG 390
Query: 204 LL 205
L
Sbjct: 391 AL 392
>AT4G31070.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:15118696-15120537 REVERSE
LENGTH=613
Length = 613
Score = 235 bits (600), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 154/534 (28%), Positives = 268/534 (50%), Gaps = 15/534 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH LK G VSN L++MY K R RKVFD M R+TVS+ ++I+ Q G
Sbjct: 69 LHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGL 128
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQ-GQQIHGLSLRSGYASIS-FVS 135
+ A+ L +M +P + AS L+ C + + + + H L L S +S
Sbjct: 129 LYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLS 188
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+L+ MY+K + A V+ N VS+ A+ISG V N E G ++F+ M +E
Sbjct: 189 TALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLR 248
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSL----HCQAVKLALDCTPLIGNVIMSMYAQFNFIEE 251
P+R + + +L L+ G SL H + + + M+MY + +
Sbjct: 249 PNRVTLLSVLPACVELN---YGSSLVKEIHGFSFRHGCHADERLTAAFMTMYCRCGNVSL 305
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
+F + +DV+ W+++I+ ++ D + +M E I + T +I+++CT
Sbjct: 306 SRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQMRKE-GIEANSVTLLAIVSACT 364
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNT 371
+H+ + + + + NAL++MYAKCGS+ A +VF +++ ++L+SW++
Sbjct: 365 NSTLLSFASTVHSQILKCGFMSHILLGNALIDMYAKCGSLSAAREVFYELTEKDLVSWSS 424
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
MI A+G HG G A+EIF+ M G + D + F +L ACNH+G+V + F + Y
Sbjct: 425 MINAYGLHGHGSEALEIFKGMIKGGHEVDDMAFLAILSACNHAGLVEEAQTIF-TQAGKY 483
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAI-GER 490
+ + H++C I++LGR G++ + E + SLLSAC HG + + G+
Sbjct: 484 HMPVTLEHYACYINLLGRFGKIDDAFEVTINMPMKPSARIWSSLLSACETHGRLDVAGKI 543
Query: 491 LAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+A L++ P + YVLLS ++ G ++ R++++ L K G++ ++
Sbjct: 544 IANELMKSEPDNPANYVLLSKIHTESGNYHAAEEVRRVMQRRKLNKCYGFSKIE 597
Score = 132 bits (332), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 183/392 (46%), Gaps = 11/392 (2%)
Query: 99 VFASTLSACA-SLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN 157
+ S + ACA + G Q+H L L++G + VSNSLI+MY K + V+
Sbjct: 48 ILPSVIKACAFQQEPFLLGAQLHCLCLKAGADCDTVVSNSLISMYAKFSRKYAVRKVFDE 107
Query: 158 SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL-DDFRT 216
+ ++VSY ++I+ ++ + ++ K M GF+P LL T + +
Sbjct: 108 MLHRDTVSYCSIINSCCQDGLLYEAMKLIKEMYFYGFIPKSELVASLLALCTRMGSSSKV 167
Query: 217 GMSLHCQA-VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS 275
H V + + L+ ++ MY +F+ VF ++ K+ +SW +I+
Sbjct: 168 ARMFHALVLVDERMQESVLLSTALVDMYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCV 227
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT---WHASFLHGKQIHAFLFRTRQY 332
+ F+ M E ++RP+ T S+L +C + +S + K+IH F FR +
Sbjct: 228 ANQNYEMGVDLFRAMQRE-NLRPNRVTLLSVLPACVELNYGSSLV--KEIHGFSFRHGCH 284
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
D + A + MY +CG++ + +F R+++ W++MI+ + G + + QM
Sbjct: 285 ADERLTAAFMTMYCRCGNVSLSRVLFETSKVRDVVMWSSMISGYAETGDCSEVMNLLNQM 344
Query: 393 KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
+ EG++ +SVT ++ AC +S ++ +S G +I + LIDM + G
Sbjct: 345 RKEGIEANSVTLLAIVSACTNSTLLSFAST-VHSQILKCGFMSHILLGNALIDMYAKCGS 403
Query: 453 LSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
LS E + D V S+++A +HG+
Sbjct: 404 LSAAREVFYELTE-KDLVSWSSMINAYGLHGH 434
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 170 ISGFVENHEPEKGFEVFKLMLQE----GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+ G V + ++ ++KL + GF S + F + F G LHC +
Sbjct: 17 LKGLVSDQFYDEALRLYKLKIHSLGTNGFTAILPSVIKACAFQQ--EPFLLGAQLHCLCL 74
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFL 285
K DC ++ N ++SMYA+F+ V +VF + +D +S+ ++IN+ ++
Sbjct: 75 KAGADCDTVVSNSLISMYAKFSRKYAVRKVFDEMLHRDTVSYCSIINSCCQDGLLYEAMK 134
Query: 286 FFKEMMNECSIRPDDFTFASILASCTWHASFLH-GKQIHAF-LFRTRQYWDVGVHNALVN 343
KEM I P AS+LA CT S + HA L R V + ALV+
Sbjct: 135 LIKEMYFYGFI-PKSELVASLLALCTRMGSSSKVARMFHALVLVDERMQESVLLSTALVD 193
Query: 344 MYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
MY K A VF +M +N +SW MI+ + E +++F M+ E ++P+ VT
Sbjct: 194 MYLKFDDHAAAFHVFDQMEVKNEVSWTAMISGCVANQNYEMGVDLFRAMQRENLRPNRVT 253
Query: 404 FTGLLIAC 411
+L AC
Sbjct: 254 LLSVLPAC 261
>AT1G13410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4601526-4603174 FORWARD
LENGTH=474
Length = 474
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 136/415 (32%), Positives = 222/415 (53%), Gaps = 17/415 (4%)
Query: 136 NSLITMYMKC--GQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
N + M C G + A V+ V N V + ++I+G++ N + F L
Sbjct: 30 NQMFLFGMLCLMGVIASANKVFCEMVEKNVVLWTSMINGYLLNKDLVSARRYFDL----- 84
Query: 194 FVPDRFSFVGLLGFSTNLDDF-RTGMSLHCQAVKLALDCTPLIG-NVIMSMYAQFNFIEE 251
P+R ++ ++T + + G L +++ + C ++ N ++ YA +E
Sbjct: 85 -SPER----DIVLWNTMISGYIEMGNMLEARSLFDQMPCRDVMSWNTVLEGYANIGDMEA 139
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
RVF + +++V SWN LI ++ + FK M++E S+ P+D T +L++C
Sbjct: 140 CERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSVVPNDATMTLVLSACA 199
Query: 312 WHASFLHGKQIHAFLFRTRQY--WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
+F GK +H + T Y DV V NAL++MY KCG+I A +VF + R+LISW
Sbjct: 200 KLGAFDFGKWVHKY-GETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKGIKRRDLISW 258
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
NTMI HG G A+ +F +MK G+ PD VTF G+L AC H G+V G YFNSM
Sbjct: 259 NTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMGLVEDGLAYFNSMFT 318
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
+ I P I H C++D+L RAG L++ E+INK D V+ +LL A +V+ + IGE
Sbjct: 319 DFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWATLLGASKVYKKVDIGE 378
Query: 490 RLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ L+++ P + +V+LSN+Y G +++ + ++ +G +KE G +W++
Sbjct: 379 VALEELIKLEPRNPANFVMLSNIYGDAGRFDDAARLKVAMRDTGFKKEAGVSWIE 433
Score = 102 bits (253), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 124/276 (44%), Gaps = 9/276 (3%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KV 93
N +L Y G + +VFD M ERN SW+ +I GY Q G L F +M V
Sbjct: 125 NTVLEGYANIGDMEACERVFDDMPERNVFSWNGLIKGYAQNGRVSEVLGSFKRMVDEGSV 184
Query: 94 LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF-VSNSLITMYMKCGQCSDAL 152
+PN+ LSACA L A G+ +H GY + V N+LI MY KCG A+
Sbjct: 185 VPNDATMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAM 244
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
V+ + +S+N +I+G + + +F M G PD+ +FVG+L ++
Sbjct: 245 EVFKGIKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHMG 304
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVR-VFRLIQDKDVISWNT 269
G++ + ++ P I + ++ + ++ F+ + V + ++ D + W T
Sbjct: 305 LVEDGLA-YFNSMFTDFSIMPEIEHCGCVVDLLSRAGFLTQAVEFINKMPVKADAVIWAT 363
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFAS 305
L+ A + + +E++ P +F S
Sbjct: 364 LLGASKVYKKVDIGEVALEELIKLEPRNPANFVMLS 399
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 17/157 (10%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGL-----QSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
T+ +L C+K F V K G + V V N L++MY KCG + +A +VF G
Sbjct: 190 TMTLVLSACAKLGAFDFGKWVHKYGETLGYNKVDVNVKNALIDMYGKCGAIEIAMEVFKG 249
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQG 116
+ R+ +SW+ MI+G G AL+LF +MK + P++ F L AC + LV+
Sbjct: 250 IKRRDLISWNTMINGLAAHGHGTEALNLFHEMKNSGISPDKVTFVGVLCACKHM-GLVE- 307
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS 153
GL+ Y + F S++ CG D LS
Sbjct: 308 ---DGLA----YFNSMFTDFSIMPEIEHCGCVVDLLS 337
>AT2G44880.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr2:18505239-18506906 FORWARD
LENGTH=555
Length = 555
Score = 233 bits (595), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 143/521 (27%), Positives = 258/521 (49%), Gaps = 16/521 (3%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWS-AMISGYDQCGEHWM 83
+L+ ++++V + + L + + ARK+FD +R+ S +MI Y + ++
Sbjct: 1 MLRHAIETNVQIFTKFLVISASAVGIGYARKLFDQRPQRDDSFLSNSMIKAYLETRQYPD 60
Query: 84 ALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLI 139
+ L+ ++ P+ F F + +C+ + QG Q+H R G+ + +VS ++
Sbjct: 61 SFALYRDLRKETCFAPDNFTFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVV 120
Query: 140 TMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
MY K G+ A + + + VS+ ALISG++ E + ++F M V D
Sbjct: 121 DMYAKFGKMGCARNAFDEMPHRSEVSWTALISGYIRCGELDLASKLFDQMPH---VKDVV 177
Query: 200 SFVGLLGFSTNLDDFRTGMSLHCQAV-KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
+ ++ D + L + K + T +I Y I+ ++F
Sbjct: 178 IYNAMMDGFVKSGDMTSARRLFDEMTHKTVITWTTMIHG-----YCNIKDIDAARKLFDA 232
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
+ +++++SWNT+I + + F+EM S+ PDD T S+L + + +
Sbjct: 233 MPERNLVSWNTMIGGYCQNKQPQEGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSL 292
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
G+ H F+ R + V V A+++MY+KCG I A ++F +M + + SWN MI +
Sbjct: 293 GEWCHCFVQRKKLDKKVKVCTAILDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYAL 352
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIG 438
+G A+++F M E KPD +T ++ ACNH G+V +G +F+ M G+ I
Sbjct: 353 NGNARAALDLFVTMMIEE-KPDEITMLAVITACNHGGLVEEGRKWFHVMREM-GLNAKIE 410
Query: 439 HFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEV 498
H+ C++D+LGRAG L E E+ I + ++L S LSAC + ++ ER+ K +E+
Sbjct: 411 HYGCMVDLLGRAGSLKEAEDLITNMPFEPNGIILSSFLSACGQYKDIERAERILKKAVEL 470
Query: 499 PPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
P YVLL NLYA+D W++ + +++ + +KE G
Sbjct: 471 EPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVG 511
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 189/401 (47%), Gaps = 14/401 (3%)
Query: 5 TIGTLLQRCSKTMT----FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T TL + CS +M LH+ + + G + ++VS +++MY K G++ AR FD M
Sbjct: 80 TFTTLTKSCSLSMCVYQGLQLHSQIWRFGFCADMYVSTGVVDMYAKFGKMGCARNAFDEM 139
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH 120
R+ VSW+A+ISGY +CGE +A LF QM + + ++ + + + +++
Sbjct: 140 PHRSEVSWTALISGYIRCGELDLASKLFDQMPHVKDVVIYNAMMDGFVKSGDMTSARRL- 198
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
+ I++ ++I Y A ++ N VS+N +I G+ +N +P+
Sbjct: 199 -FDEMTHKTVITWT--TMIHGYCNIKDIDAARKLFDAMPERNLVSWNTMIGGYCQNKQPQ 255
Query: 181 KGFEVFKLM-LQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVI 239
+G +F+ M PD + + +L ++ G HC + LD + I
Sbjct: 256 EGIRLFQEMQATTSLDPDDVTILSVLPAISDTGALSLGEWCHCFVQRKKLDKKVKVCTAI 315
Query: 240 MSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
+ MY++ IE+ R+F + +K V SWN +I+ ++ + + F MM E +PD
Sbjct: 316 LDMYSKCGEIEKAKRIFDEMPEKQVASWNAMIHGYALNGNARAALDLFVTMMIE--EKPD 373
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
+ T +++ +C G++ + + + +V++ + GS+ A + +
Sbjct: 374 EITMLAVITACNHGGLVEEGRKWFHVMREMGLNAKIEHYGCMVDLLGRAGSLKEAEDLIT 433
Query: 360 KMSYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKP 399
M + N I ++ ++A G + ERA I + KA ++P
Sbjct: 434 NMPFEPNGIILSSFLSACGQYKDIERAERILK--KAVELEP 472
>AT2G33760.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14275800-14277551 FORWARD
LENGTH=583
Length = 583
Score = 233 bits (594), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 127/457 (27%), Positives = 235/457 (51%), Gaps = 8/457 (1%)
Query: 92 KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDA 151
KV N + + + A ++ L QQ+H + +GY + LIT+ +
Sbjct: 4 KVAANSAAYEAIVRAGPRVKQL---QQVHAHLIVTGYGRSRSLLTKLITLACSARAIAYT 60
Query: 152 LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
++ + + +N++I + P ++ ML P ++F ++ +L
Sbjct: 61 HLLFLSVPLPDDFLFNSVIKSTSKLRLPLHCVAYYRRMLSSNVSPSNYTFTSVIKSCADL 120
Query: 212 DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
R G +HC AV + +++ Y++ +E +VF + +K +++WN+L+
Sbjct: 121 SALRIGKGVHCHAVVSGFGLDTYVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLV 180
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
+ F ++ F +M E PD TF S+L++C + G +H ++
Sbjct: 181 SGFEQNGLADEAIQVFYQM-RESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGL 239
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQ 391
+V + AL+N+Y++CG +G A +VF KM N+ +W MI+A+G HG G++A+E+F +
Sbjct: 240 DLNVKLGTALINLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNK 299
Query: 392 MKAE-GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
M+ + G P++VTF +L AC H+G+V +G + M +Y + P + H C++DMLGRA
Sbjct: 300 MEDDCGPIPNNVTFVAVLSACAHAGLVEEGRSVYKRMTKSYRLIPGVEHHVCMVDMLGRA 359
Query: 451 GRLSEVEEYINKFH---HLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYV 507
G L E ++I++ P + ++L AC++H N +G +AK L+ + P +V
Sbjct: 360 GFLDEAYKFIHQLDATGKATAPALWTAMLGACKMHRNYDLGVEIAKRLIALEPDNPGHHV 419
Query: 508 LLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+LSN+YA G +EV+ R + + LRK+ GY+ ++
Sbjct: 420 MLSNIYALSGKTDEVSHIRDGMMRNNLRKQVGYSVIE 456
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 6/209 (2%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
HA V GL + +V L+ Y KCG + AR+VFD M E++ V+W++++SG++Q G
Sbjct: 132 HAVVSGFGLDT--YVQAALVTFYSKCGDMEGARQVFDRMPEKSIVAWNSLVSGFEQNGLA 189
Query: 82 WMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSL 138
A+ +F QM+ P+ F S LSACA A+ G +H + G + +L
Sbjct: 190 DEAIQVFYQMRESGFEPDSATFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTAL 249
Query: 139 ITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE-GFVPD 197
I +Y +CG A V+ TN ++ A+IS + + ++ E+F M + G +P+
Sbjct: 250 INLYSRCGDVGKAREVFDKMKETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPN 309
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVK 226
+FV +L + G S++ + K
Sbjct: 310 NVTFVAVLSACAHAGLVEEGRSVYKRMTK 338
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 5 TIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T +LL C++T L H ++ GL +V + L+N+Y +CG V AR+VFD M
Sbjct: 210 TFVSLLSACAQTGAVSLGSWVHQYIISEGLDLNVKLGTALINLYSRCGDVGKAREVFDKM 269
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQG 116
E N +W+AMIS Y G A+ LF++M+ +PN F + LSACA + +G
Sbjct: 270 KETNVAAWTAMISAYGTHGYGQQAVELFNKMEDDCGPIPNNVTFVAVLSACAHAGLVEEG 329
Query: 117 QQIH 120
+ ++
Sbjct: 330 RSVY 333
>AT1G28690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10080042-10081604 REVERSE
LENGTH=520
Length = 520
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 146/523 (27%), Positives = 257/523 (49%), Gaps = 63/523 (12%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA ++K G Q + +S +LL +++KCG + AR+VFD + + +++ MISGY + G
Sbjct: 56 IHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLKHG- 114
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
L ++ +L ++ + +L +++ G ++ + V +I
Sbjct: 115 ------LVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRGSTMILPRSLCRLVHARII- 167
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
KC V + V AL+ +V++ + E VF+ M E V
Sbjct: 168 ---KC------------DVELDDVLITALVDTYVKSGKLESARTVFETMKDENVV----- 207
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ 260
C CT +I S Y F+E+ +F +
Sbjct: 208 ---------------------C--------CTSMI-----SGYMNQGFVEDAEEIFNTTK 233
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGK 320
KD++ +N ++ FS + K + M P+ TFAS++ +C+ S G+
Sbjct: 234 VKDIVVYNAMVEGFSRSGETAKRSVDMYISMQRAGFHPNISTFASVIGACSVLTSHEVGQ 293
Query: 321 QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHG 380
Q+HA + ++ Y + + ++L++MYAKCG I A +VF +M +N+ SW +MI +G +G
Sbjct: 294 QVHAQIMKSGVYTHIKMGSSLLDMYAKCGGINDARRVFDQMQEKNVFSWTSMIDGYGKNG 353
Query: 381 LGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHF 440
E A+E+F +MK ++P+ VTF G L AC+HSG+V KG F SM+ Y + P + H+
Sbjct: 354 NPEEALELFTRMKEFRIEPNYVTFLGALSACSHSGLVDKGYEIFESMQRDYSMKPKMEHY 413
Query: 441 SCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEV-P 499
+C++D++GRAG L++ E+ D + +LLS+C +HGN+ + A L ++
Sbjct: 414 ACIVDLMGRAGDLNKAFEFARAMPERPDSDIWAALLSSCNLHGNVELASIAASELFKLNA 473
Query: 500 PVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAW 542
Y+ LSN+YAS+ W+ V+ R+++K + K G +W
Sbjct: 474 DKRPGAYLALSNVYASNDKWDNVSKIREVMKRRRISKTIGRSW 516
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 54/97 (55%)
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
GK+IHA + +T D+ + L+ ++ KCG + YA +VF ++ L ++N MI+ +
Sbjct: 53 GKKIHADIIKTGFQPDLNISIKLLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK 112
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
HGL + + + ++M G K D T + +L A N G
Sbjct: 113 HGLVKELLLLVQRMSYSGEKADGYTLSMVLKASNSRG 149
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 110/275 (40%), Gaps = 18/275 (6%)
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
P + F L + G L N + G +H +K I
Sbjct: 15 PSNHYSTFPLKQNVSSLSPAKYIAGALQEHINSPAPKAGKKIHADIIKTGFQPDLNISIK 74
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG--KSFLFFKEMMNECSI 296
++ ++ + + +VF + + ++N +I+ + G K L + M+
Sbjct: 75 LLILHLKCGCLSYARQVFDELPKPTLSAYNYMISGYLK---HGLVKELLLLVQRMSYSGE 131
Query: 297 RPDDFTFASILASCTWHASFL-----HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI 351
+ D +T + +L + S + + +HA + + D + ALV+ Y K G +
Sbjct: 132 KADGYTLSMVLKASNSRGSTMILPRSLCRLVHARIIKCDVELDDVLITALVDTYVKSGKL 191
Query: 352 GYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
A VF M N++ +MI+ + N G E A EIF K + D V + ++
Sbjct: 192 ESARTVFETMKDENVVCCTSMISGYMNQGFVEDAEEIFNTTKVK----DIVVYNAMVEGF 247
Query: 412 NHSGMV--RKGDLYFNSMEAAYGIAPNIGHFSCLI 444
+ SG R D+Y SM+ A G PNI F+ +I
Sbjct: 248 SRSGETAKRSVDMYI-SMQRA-GFHPNISTFASVI 280
>AT3G26540.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9744542-9746644 REVERSE
LENGTH=700
Length = 700
Score = 232 bits (592), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 152/512 (29%), Positives = 256/512 (50%), Gaps = 39/512 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH AV+K G +V + ++++Y KC + AR+VFD + + VSW+ ++ Y + G
Sbjct: 184 LHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEMGF 243
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
+ A+ +F +M V P +S + AC+ AL G+ IH ++++ + + VS S
Sbjct: 244 NDEAVVMFFKMLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADTVVSTS 303
Query: 138 LITMYMKCGQC------------------SDALSVYANSVGT-------------NSVSY 166
+ MY+KC + + A+S YA S T N VS+
Sbjct: 304 VFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPERNIVSW 363
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK 226
NA++ G+V HE ++ + LM QE D + V +L + + D + G H +
Sbjct: 364 NAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGKQAHGFIYR 423
Query: 227 LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD-KDVISWNTLINAFSHFDDQGKSFL 285
D ++ N ++ MY + ++ FR + + +D +SWN L+ + ++
Sbjct: 424 HGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLTGVARVGRSEQALS 483
Query: 286 FFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMY 345
FF+ M E +P +T A++LA C + GK IH FL R DV + A+V+MY
Sbjct: 484 FFEGMQVEA--KPSKYTLATLLAGCANIPALNLGKAIHGFLIRDGYKIDVVIRGAMVDMY 541
Query: 346 AKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
+KC YA +VF + + R+LI WN++I +G + E+F ++ EGVKPD VTF
Sbjct: 542 SKCRCFDYAIEVFKEAATRDLILWNSIIRGCCRNGRSKEVFELFMLLENEGVKPDHVTFL 601
Query: 406 GLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHH 465
G+L AC G V G YF+SM Y I+P + H+ C+I++ + G L ++EE++
Sbjct: 602 GILQACIREGHVELGFQYFSSMSTKYHISPQVEHYDCMIELYCKYGCLHQLEEFL-LLMP 660
Query: 466 LNDPV-VLGSLLSACRVHGNMAIGERLAKLLL 496
+ P+ +L + AC+ + +G AK L+
Sbjct: 661 FDPPMQMLTRINDACQRYRWSKLGAWAAKRLM 692
Score = 159 bits (402), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 111/413 (26%), Positives = 190/413 (46%), Gaps = 37/413 (8%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK- 92
+F+ N+ + Y KCG V AR++F+ M ER+ SW+A+I+ Q G +F +M
Sbjct: 96 IFLLNRAIEAYGKCGCVDDARELFEEMPERDGGSWNAVITACAQNGVSDEVFRMFRRMNR 155
Query: 93 --VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
V E FA L +C + L +Q+H ++ GY+ + S++ +Y KC SD
Sbjct: 156 DGVRATETSFAGVLKSCGLILDLRLLRQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSD 215
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
A V+ V + VS+N ++ ++E ++ +F ML+ P + ++ +
Sbjct: 216 ARRVFDEIVNPSDVSWNVIVRRYLEMGFNDEAVVMFFKMLELNVRPLNHTVSSVMLACSR 275
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV--------------- 255
G +H AVKL++ ++ + MY + + +E RV
Sbjct: 276 SLALEVGKVIHAIAVKLSVVADTVVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSA 335
Query: 256 ----------------FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
F L+ +++++SWN ++ + H + ++ F M E D
Sbjct: 336 MSGYAMSGLTREARELFDLMPERNIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIE-NID 394
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
+ T IL C+ + GKQ H F++R +V V NAL++MY KCG++ A+ F
Sbjct: 395 NVTLVWILNVCSGISDVQMGKQAHGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFR 454
Query: 360 KMS-YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
+MS R+ +SWN ++ G E+A+ FE M+ E KP T LL C
Sbjct: 455 QMSELRDEVSWNALLTGVARVGRSEQALSFFEGMQVEA-KPSKYTLATLLAGC 506
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 177/413 (42%), Gaps = 37/413 (8%)
Query: 98 FVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN 157
+++ +C+S +VQ +++ + F+ N I Y KCG DA ++
Sbjct: 62 WLYERLFRSCSSKALVVQARKVQSHLVTFSPLPPIFLLNRAIEAYGKCGCVDDARELFEE 121
Query: 158 SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTG 217
+ S+NA+I+ +N ++ F +F+ M ++G SF G+L + D R
Sbjct: 122 MPERDGGSWNAVITACAQNGVSDEVFRMFRRMNRDGVRATETSFAGVLKSCGLILDLRLL 181
Query: 218 MSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH- 276
LHC VK + I+ +Y + + + RVF I + +SWN ++ +
Sbjct: 182 RQLHCAVVKYGYSGNVDLETSIVDVYGKCRVMSDARRVFDEIVNPSDVSWNVIVRRYLEM 241
Query: 277 -FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
F+D+ +FFK M E ++RP + T +S++ +C+ + GK IHA + D
Sbjct: 242 GFNDEA-VVMFFK--MLELNVRPLNHTVSSVMLACSRSLALEVGKVIHAIAVKLSVVADT 298
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSK-------------------------------MSYR 364
V ++ +MY KC + A +VF + M R
Sbjct: 299 VVSTSVFDMYVKCDRLESARRVFDQTRSKDLKSWTSAMSGYAMSGLTREARELFDLMPER 358
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYF 424
N++SWN M+ + + + A++ M+ E D+VT +L C+ V+ G
Sbjct: 359 NIVSWNAMLGGYVHAHEWDEALDFLTLMRQEIENIDNVTLVWILNVCSGISDVQMGK-QA 417
Query: 425 NSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
+ +G N+ + L+DM G+ G L + + L D V +LL+
Sbjct: 418 HGFIYRHGYDTNVIVANALLDMYGKCGTLQSANIWFRQMSELRDEVSWNALLT 470
>AT5G43790.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:17592099-17593481 REVERSE
LENGTH=460
Length = 460
Score = 232 bits (591), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 143/455 (31%), Positives = 233/455 (51%), Gaps = 26/455 (5%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQC-SDALSVYANSVGTN 162
+S C SL+ L +QIH + G + ++ + L +++ C S ALS+ +
Sbjct: 16 ISKCKSLQNL---KQIHAQIITIGLSHHTYPLSKL--LHLSSTVCLSYALSILRQIPNPS 70
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQ-----EGFV-PDRFSFVGLL---GFSTNLDD 213
YN LIS V NH + F L Q FV P+ F++ L GF
Sbjct: 71 VFLYNTLISSIVSNHNSTQTHLAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWH- 129
Query: 214 FRTGMSLHCQAVKL--ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
R G +LH +K ++ + ++ YA + E +F I++ D+ +WNTL+
Sbjct: 130 -RHGRALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLL 188
Query: 272 NAFSH---FDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
A+++ D + L F M +RP++ + +++ SC F+ G H ++ +
Sbjct: 189 AAYANSEEIDSDEEVLLLFMRMQ----VRPNELSLVALIKSCANLGEFVRGVWAHVYVLK 244
Query: 329 TRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEI 388
+ V +L+++Y+KCG + +A KVF +MS R++ +N MI HG G+ IE+
Sbjct: 245 NNLTLNQFVGTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIEL 304
Query: 389 FEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
++ + ++G+ PDS TF + AC+HSG+V +G FNSM+A YGI P + H+ CL+D+LG
Sbjct: 305 YKSLISQGLVPDSATFVVTISACSHSGLVDEGLQIFNSMKAVYGIEPKVEHYGCLVDLLG 364
Query: 449 RAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVL 508
R+GRL E EE I K + + S L + + HG+ GE K LL + + YVL
Sbjct: 365 RSGRLEEAEECIKKMPVKPNATLWRSFLGSSQTHGDFERGEIALKHLLGLEFENSGNYVL 424
Query: 509 LSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
LSN+YA W +V R+++K + K PG + L
Sbjct: 425 LSNIYAGVNRWTDVEKTRELMKDHRVNKSPGISTL 459
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 5/188 (2%)
Query: 20 GLHAAVLKI--GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY-- 75
LHA VLK + FV L+ Y CG++ AR +F+ + E + +W+ +++ Y
Sbjct: 134 ALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN 193
Query: 76 -DQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
++ L LF +M+V PNE + + +CA+L V+G H L++ FV
Sbjct: 194 SEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFV 253
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
SLI +Y KCG S A V+ + YNA+I G + ++G E++K ++ +G
Sbjct: 254 GTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQGL 313
Query: 195 VPDRFSFV 202
VPD +FV
Sbjct: 314 VPDSATFV 321
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 165/394 (41%), Gaps = 21/394 (5%)
Query: 9 LLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNM-YVKCGRVVLA--RKVFDGMSERN 64
L+ +C +HA ++ IGL H + ++LL++ C L+ R++ +
Sbjct: 15 LISKCKSLQNLKQIHAQIITIGLSHHTYPLSKLLHLSSTVCLSYALSILRQIPNPSVFLY 74
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMK------VLPNEFVFASTLSAC---ASLRALVQ 115
S+++S ++ H +A L+ Q+ V PNEF + S A A +
Sbjct: 75 NTLISSIVSNHNSTQTH-LAFSLYDQILSSRSNFVRPNEFTYPSLFKASGFDAQWHRHGR 133
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
H L FV +L+ Y CG+ +A S++ + ++N L++ +
Sbjct: 134 ALHAHVLKFLEPVNHDRFVQAALVGFYANCGKLREARSLFERIREPDLATWNTLLAAYAN 193
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ E + EV L ++ P+ S V L+ NL +F G+ H +K L +
Sbjct: 194 SEEIDSDEEVLLLFMRMQVRPNELSLVALIKSCANLGEFVRGVWAHVYVLKNNLTLNQFV 253
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
G ++ +Y++ + +VF + +DV +N +I + + +K ++++
Sbjct: 254 GTSLIDLYSKCGCLSFARKVFDEMSQRDVSCYNAMIRGLAVHGFGQEGIELYKSLISQ-G 312
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNMYAKCGSIG 352
+ PD TF +++C+ G QI F Y V + LV++ + G +
Sbjct: 313 LVPDSATFVVTISACSHSGLVDEGLQI--FNSMKAVYGIEPKVEHYGCLVDLLGRSGRLE 370
Query: 353 YAHKVFSKMSYR-NLISWNTMIAAFGNHGLGERA 385
A + KM + N W + + + HG ER
Sbjct: 371 EAEECIKKMPVKPNATLWRSFLGSSQTHGDFERG 404
>AT5G66500.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:26548076-26549674 REVERSE
LENGTH=532
Length = 532
Score = 231 bits (590), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 150/500 (30%), Positives = 255/500 (51%), Gaps = 18/500 (3%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM-KVLPN--EFVFASTLSACAS 109
A +FD + +R+ S ++ +S + + G L LF Q+ + P+ F L AC+
Sbjct: 37 ADHLFDELPQRDLSSLNSQLSSHLRSGNPNDTLALFLQIHRASPDLSSHTFTPVLGACSL 96
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
L G+Q+H L ++ G + + +LI MY K G D++ V+ + + VS+NAL
Sbjct: 97 LSYPETGRQVHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNAL 156
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
+SGF+ N + ++ VF M +E F+ ++ +L + G +H V
Sbjct: 157 LSGFLRNGKGKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR 216
Query: 230 DCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFK 288
D ++G ++S Y+ I E ++V+ + D + N+LI+ + ++FL
Sbjct: 217 DLV-VLGTAMISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAFLLMS 275
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
RP+ +S LA C+ ++ GKQIH R D + N L++MY KC
Sbjct: 276 RQ------RPNVRVLSSSLAGCSDNSDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKC 329
Query: 349 GSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE--GVKPDSVTFTG 406
G I A +F + ++++SW +MI A+ +G G +A+EIF +M E GV P+SVTF
Sbjct: 330 GQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLV 389
Query: 407 LLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHL 466
++ AC H+G+V++G F M+ Y + P H+ C ID+L +AG E+ + +
Sbjct: 390 VISACAHAGLVKEGKECFGMMKEKYRLVPGTEHYVCFIDILSKAGETEEIWRLVERMMEN 449
Query: 467 NDP----VVLGSLLSACRVHGNMAIGERLAKLLL-EVPPVTTSPYVLLSNLYASDGMWNE 521
++ + ++LSAC ++ ++ GE +A+ L+ E P S YVL+SN YA+ G W+
Sbjct: 450 DNQSIPCAIWVAVLSACSLNMDLTRGEYVARRLMEETGPENASIYVLVSNFYAAMGKWDV 509
Query: 522 VTSARKMLKGSGLRKEPGYA 541
V R LK GL K G++
Sbjct: 510 VEELRGKLKNKGLVKTAGHS 529
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 164/306 (53%), Gaps = 11/306 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA ++K G ++ L++MY K G +V + +VF+ + E++ VSW+A++SG+ + G+
Sbjct: 106 VHALMIKQGAETGTISKTALIDMYSKYGHLVDSVRVFESVEEKDLVSWNALLSGFLRNGK 165
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL +F+ M +V +EF +S + CASL+ L QG+Q+H + + +G + + +
Sbjct: 166 GKEALGVFAAMYRERVEISEFTLSSVVKTCASLKILQQGKQVHAMVVVTGR-DLVVLGTA 224
Query: 138 LITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+I+ Y G ++A+ VY + +V T+ V N+LISG + N ++ F L++
Sbjct: 225 MISFYSSVGLINEAMKVYNSLNVHTDEVMLNSLISGCIRNRNYKEAF----LLMSRQRPN 280
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
R L G S N D G +HC A++ + N +M MY + I + +F
Sbjct: 281 VRVLSSSLAGCSDN-SDLWIGKQIHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIF 339
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS-IRPDDFTFASILASCTWHAS 315
R I K V+SW ++I+A++ D K+ F+EM E S + P+ TF ++++C
Sbjct: 340 RAIPSKSVVSWTSMIDAYAVNGDGVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGL 399
Query: 316 FLHGKQ 321
GK+
Sbjct: 400 VKEGKE 405
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 59/107 (55%), Gaps = 5/107 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H L+ G S + N L++MY KCG++V AR +F + ++ VSW++MI Y G+
Sbjct: 303 IHCVALRNGFVSDSKLCNGLMDMYGKCGQIVQARTIFRAIPSKSVVSWTSMIDAYAVNGD 362
Query: 81 HWMALHLFSQM-----KVLPNEFVFASTLSACASLRALVQGQQIHGL 122
AL +F +M VLPN F +SACA + +G++ G+
Sbjct: 363 GVKALEIFREMCEEGSGVLPNSVTFLVVISACAHAGLVKEGKECFGM 409
>AT1G62260.1 | Symbols: MEF9 | mitochondrial editing factor 9 |
chr1:22997826-22999796 REVERSE LENGTH=656
Length = 656
Score = 231 bits (590), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 152/533 (28%), Positives = 256/533 (48%), Gaps = 41/533 (7%)
Query: 35 FVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL 94
F N +++ Y K R+ A +F+ M ERN VSWSAMI+G+ Q GE A+ LF +M V
Sbjct: 137 FSWNTMISGYAKNRRIGEALLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPV- 195
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGL--------SLRSGYASISFVSNSLITMYMKCG 146
+ CA + L++ +++ SL SG + + N+LI Y + G
Sbjct: 196 ------KDSSPLCALVAGLIKNERLSEAAWVLGQYGSLVSGREDLVYAYNTLIVGYGQRG 249
Query: 147 QCSDALSV---------------YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
Q A + + N VS+N++I +++ + +F M
Sbjct: 250 QVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKD 309
Query: 192 EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEE 251
D S+ ++ ++ +L + N+++S YA +E
Sbjct: 310 R----DTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHS----WNMMVSGYASVGNVEL 361
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
F +K +SWN++I A+ D ++ F M E +PD T S+L++ T
Sbjct: 362 ARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVDLFIRMNIEGE-KPDPHTLTSLLSAST 420
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSY-RNLISWN 370
+ G Q+H + +T DV VHNAL+ MY++CG I + ++F +M R +I+WN
Sbjct: 421 GLVNLRLGMQMHQIVVKT-VIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWN 479
Query: 371 TMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAA 430
MI + HG A+ +F MK+ G+ P +TF +L AC H+G+V + F SM +
Sbjct: 480 AMIGGYAFHGNASEALNLFGSMKSNGIYPSHITFVSVLNACAHAGLVDEAKAQFVSMMSV 539
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGER 490
Y I P + H+S L+++ G+ E I D V G+LL ACR++ N+ +
Sbjct: 540 YKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSMPFEPDKTVWGALLDACRIYNNVGLAHV 599
Query: 491 LAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
A+ + + P +++PYVLL N+YA G+W+E + R ++ ++KE G +W+
Sbjct: 600 AAEAMSRLEPESSTPYVLLYNMYADMGLWDEASQVRMNMESKRIKKERGSSWV 652
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/473 (24%), Positives = 210/473 (44%), Gaps = 50/473 (10%)
Query: 37 SNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPN 96
+N+ LN ++ G + AR +F+ + RNTV+W+ MISGY + E A LF V+P
Sbjct: 43 TNKELNQMIRSGYIAEARDIFEKLEARNTVTWNTMISGYVKRREMNQARKLFD---VMPK 99
Query: 97 EFVFA-----STLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDA 151
V S +C +R L + +++ + SF N++I+ Y K + +A
Sbjct: 100 RDVVTWNTMISGYVSCGGIRFLEEARKL----FDEMPSRDSFSWNTMISGYAKNRRIGEA 155
Query: 152 LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
L ++ N+VS++A+I+GF +N E + +F+ M + P GL+ + L
Sbjct: 156 LLLFEKMPERNAVSWSAMITGFCQNGEVDSAVVLFRKMPVKDSSPLCALVAGLIK-NERL 214
Query: 212 DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD---------- 261
+ + + V D +I+ Y Q +E +F I D
Sbjct: 215 SEAAWVLGQYGSLVSGREDLVYAYNTLIVG-YGQRGQVEAARCLFDQIPDLCGDDHGGEF 273
Query: 262 -----KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA-- 314
K+V+SWN++I A+ D + L F +M + +I +W+
Sbjct: 274 RERFCKNVVSWNSMIKAYLKVGDVVSARLLFDQMKDRDTI--------------SWNTMI 319
Query: 315 -SFLHGKQIH-AF-LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNT 371
++H ++ AF LF D N +V+ YA G++ A F K ++ +SWN+
Sbjct: 320 DGYVHVSRMEDAFALFSEMPNRDAHSWNMMVSGYASVGNVELARHYFEKTPEKHTVSWNS 379
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
+IAA+ + + A+++F +M EG KPD T T LL A +R G + + +
Sbjct: 380 IIAAYEKNKDYKEAVDLFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLG-MQMHQI-VVK 437
Query: 432 GIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGN 484
+ P++ + LI M R G + E ++ + + +++ HGN
Sbjct: 438 TVIPDVPVHNALITMYSRCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGN 490
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 182/402 (45%), Gaps = 48/402 (11%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE---------------RNTVSWSAMIS 73
G + V+ N L+ Y + G+V AR +FD + + +N VSW++MI
Sbjct: 230 GREDLVYAYNTLIVGYGQRGQVEAARCLFDQIPDLCGDDHGGEFRERFCKNVVSWNSMIK 289
Query: 74 GYDQCGEHWMALHLFSQMK--------VLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
Y + G+ A LF QMK + + +V S + +L + + + H ++
Sbjct: 290 AYLKVGDVVSARLLFDQMKDRDTISWNTMIDGYVHVSRMEDAFALFSEMPNRDAHSWNMM 349
Query: 126 -SGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
SGYAS+ G A + + ++VS+N++I+ + +N + ++ +
Sbjct: 350 VSGYASV--------------GNVELARHYFEKTPEKHTVSWNSIIAAYEKNKDYKEAVD 395
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYA 244
+F M EG PD + LL ST L + R GM +H VK + P + N +++MY+
Sbjct: 396 LFIRMNIEGEKPDPHTLTSLLSASTGLVNLRLGMQMHQIVVKTVIPDVP-VHNALITMYS 454
Query: 245 QFNFIEEVVRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTF 303
+ I E R+F ++ ++VI+WN +I ++ + ++ F M + I P TF
Sbjct: 455 RCGEIMESRRIFDEMKLKREVITWNAMIGGYAFHGNASEALNLFGSMKSN-GIYPSHITF 513
Query: 304 ASILASCTWHASFLH--GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
S+L +C HA + Q + + + + +++LVN+ + G A + + M
Sbjct: 514 VSVLNACA-HAGLVDEAKAQFVSMMSVYKIEPQMEHYSSLVNVTSGQGQFEEAMYIITSM 572
Query: 362 SYR-NLISWNTMIAA---FGNHGLGERAIEIFEQMKAEGVKP 399
+ + W ++ A + N GL A E +++ E P
Sbjct: 573 PFEPDKTVWGALLDACRIYNNVGLAHVAAEAMSRLEPESSTP 614
>AT5G48910.1 | Symbols: LPA66 | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19832969-19834909 REVERSE
LENGTH=646
Length = 646
Score = 231 bits (589), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 140/487 (28%), Positives = 238/487 (48%), Gaps = 54/487 (11%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLI----TMYMKCGQCSDALSVYANSV 159
++ C ++R L QIH + ++SG + + ++ T + A ++
Sbjct: 30 INNCRTIRDL---SQIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMP 86
Query: 160 GTNSVSYNALISGFVENHEPEK--GFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRT 216
N S+N +I GF E+ E + +F M+ + FV P+RF+F +L +
Sbjct: 87 QRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQE 146
Query: 217 GMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEE--------------VVRVFRLIQDK 262
G +H A+K + + ++ MY F+++ VV R +D
Sbjct: 147 GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDG 206
Query: 263 DVISWNTLINAFSHFDDQGKSFLFFKEM------------------------------MN 292
+++ WN +I+ + D + + F +M M
Sbjct: 207 EIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMK 266
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
+ IRP+ T S+L + + S G+ +H + + D + +AL++MY+KCG I
Sbjct: 267 KGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIE 326
Query: 353 YAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
A VF ++ N+I+W+ MI F HG AI+ F +M+ GV+P V + LL AC+
Sbjct: 327 KAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACS 386
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL 472
H G+V +G YF+ M + G+ P I H+ C++D+LGR+G L E EE+I D V+
Sbjct: 387 HGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIW 446
Query: 473 GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGS 532
+LL ACR+ GN+ +G+R+A +L+++ P + YV LSN+YAS G W+EV+ R +K
Sbjct: 447 KALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEK 506
Query: 533 GLRKEPG 539
+RK+PG
Sbjct: 507 DIRKDPG 513
Score = 140 bits (354), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 203/501 (40%), Gaps = 107/501 (21%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVL-------ARKVFDGMSERNTVSWSAMIS 73
+HA +K G + ++L C L A K+F+ M +RN SW+ +I
Sbjct: 42 IHAVFIKSGQMRDTLAAAEILRF---CATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIR 98
Query: 74 GYDQCGEH--WMALHLFSQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSG 127
G+ + E +A+ LF +M V PN F F S L ACA + +G+QIHGL+L+ G
Sbjct: 99 GFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYG 158
Query: 128 YASISFVSNSLITMYMKCGQCSDALSVYANSV---------------------------- 159
+ FV ++L+ MY+ CG DA ++ ++
Sbjct: 159 FGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGY 218
Query: 160 -----------------GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
+ VS+N +ISG+ N + EVF+ M + P+ + V
Sbjct: 219 MRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLV 278
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK 262
+L + L G LH A + ++G+ ++ MY++ IE+ + VF + +
Sbjct: 279 SVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPRE 338
Query: 263 DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQI 322
+VI+W+ +IN F+ G + F + M + +RP D + ++L +C+ HG
Sbjct: 339 NVITWSAMINGFAIHGQAGDAIDCFCK-MRQAGVRPSDVAYINLLTACS------HG--- 388
Query: 323 HAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS-----WNTMIAAFG 377
G + + FS+M + + + M+ G
Sbjct: 389 --------------------------GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLG 422
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
GL + A E M +KPD V + LL AC G V G N + + +
Sbjct: 423 RSGLLDEAEEFILNMP---IKPDDVIWKALLGACRMQGNVEMGKRVANILMDM--VPHDS 477
Query: 438 GHFSCLIDMLGRAGRLSEVEE 458
G + L +M G SEV E
Sbjct: 478 GAYVALSNMYASQGNWSEVSE 498
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 147/338 (43%), Gaps = 50/338 (14%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VL 94
N +++ Y++ G AR +FD M +R+ VSW+ MISGY G A+ +F +MK +
Sbjct: 212 NVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIR 271
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
PN S L A + L +L G+ +H + SG + ++LI MY KCG A+ V
Sbjct: 272 PNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHV 331
Query: 155 YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF 214
+ N ++++A+I+GF + + + F M Q G P +++ LL
Sbjct: 332 FERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLL--------- 382
Query: 215 RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
+ + +EE R F ++S + L
Sbjct: 383 --------------------------TACSHGGLVEEGRRYF-----SQMVSVDGLEPRI 411
Query: 275 SHF----DDQGKSFLF--FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
H+ D G+S L +E + I+PDD + ++L +C + GK++ L
Sbjct: 412 EHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMD 471
Query: 329 TRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL 366
+ D G + AL NMYA G+ ++ +M +++
Sbjct: 472 MVPH-DSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
>AT1G33350.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:12090071-12091687 REVERSE
LENGTH=538
Length = 538
Score = 231 bits (589), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/309 (38%), Positives = 177/309 (57%), Gaps = 3/309 (0%)
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
++S YA+ I V +F + ++DV SWN ++ A + ++ F+ M+NE SIRP
Sbjct: 199 MLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRP 258
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
++ T +L++C + K IHAF +R DV V N+LV++Y KCG++ A VF
Sbjct: 259 NEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVF 318
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM---KAEGVKPDSVTFTGLLIACNHSG 415
S ++L +WN+MI F HG E AI +FE+M +KPD +TF GLL AC H G
Sbjct: 319 KMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGG 378
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
+V KG YF+ M +GI P I H+ CLID+LGRAGR E E ++ D + GSL
Sbjct: 379 LVSKGRGYFDLMTNRFGIEPRIEHYGCLIDLLGRAGRFDEALEVMSTMKMKADEAIWGSL 438
Query: 476 LSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR 535
L+AC++HG++ + E K L+ + P +++NLY G W E ARKM+K
Sbjct: 439 LNACKIHGHLDLAEVAVKNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQNAY 498
Query: 536 KEPGYAWLK 544
K PG++ ++
Sbjct: 499 KPPGWSRIE 507
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 133/304 (43%), Gaps = 61/304 (20%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVK-CGRVVLARKVFDGMSERNTVSWSAMISGYDQCG 79
+H + K G +V V LL+ Y + LAR++FD MSERN VSW+AM+SGY + G
Sbjct: 148 VHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSG 207
Query: 80 EHWMALHLFSQMK-----------------------------------VLPNEFVFASTL 104
+ A+ LF M + PNE L
Sbjct: 208 DISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVL 267
Query: 105 SACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSV 164
SACA L + IH + R +S FVSNSL+ +Y KCG +A SV+ + +
Sbjct: 268 SACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMASKKSLT 327
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQ---EGFVPDRFSFVGLLGFST------------ 209
++N++I+ F + E+ VF+ M++ PD +F+GLL T
Sbjct: 328 AWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNACTHGGLVSKGRGYF 387
Query: 210 NLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
+L R G+ + +D L+G +F+ EV+ ++ D+ + W +
Sbjct: 388 DLMTNRFGIEPRIEHYGCLID---LLGRA-----GRFDEALEVMSTMKMKADEAI--WGS 437
Query: 270 LINA 273
L+NA
Sbjct: 438 LLNA 441
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/461 (20%), Positives = 188/461 (40%), Gaps = 86/461 (18%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHL---FSQMKVL-------PNEFVFAS 102
AR +FD S NT ++A+++ Y + LH FS +++ PN F++
Sbjct: 76 ARFIFDRFSFPNTHLYAAVLTAYSSS----LPLHASSAFSFFRLMVNRSVPRPNHFIYPL 131
Query: 103 TLSACASLRALVQGQQIHGLSLRSGY---------------ASISFVS------------ 135
L + L + +H +SG+ +S+S ++
Sbjct: 132 VLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALLHSYASSVSHITLARQLFDEMSER 191
Query: 136 -----NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
++++ Y + G S+A++++ + + S+NA+++ +N + +F+ M+
Sbjct: 192 NVVSWTAMLSGYARSGDISNAVALFEDMPERDVPSWNAILAACTQNGLFLEAVSLFRRMI 251
Query: 191 QEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
E + P+ + V +L + +H A + L + N ++ +Y + +
Sbjct: 252 NEPSIRPNEVTVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNL 311
Query: 250 EEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM--NECSIRPDDFTFASIL 307
EE VF++ K + +WN++IN F+ ++ F+EMM N I+PD TF +L
Sbjct: 312 EEASSVFKMASKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLL 371
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI 367
+CT HG + + R Y+D+ + N + I +
Sbjct: 372 NACT------HG----GLVSKGRGYFDL-----MTNRFGIEPRIEH-------------- 402
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
+ +I G G + A+E+ MK +K D + LL AC G + DL ++
Sbjct: 403 -YGCLIDLLGRAGRFDEALEVMSTMK---MKADEAIWGSLLNACKIHGHL---DLAEVAV 455
Query: 428 EAAYGIAPNIGHFSCLI-DMLGRAGRLSEVEEYINKFHHLN 467
+ + PN G + ++ ++ G G E H N
Sbjct: 456 KNLVALNPNNGGYVAMMANLYGEMGNWEEARRARKMIKHQN 496
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 90/187 (48%), Gaps = 6/187 (3%)
Query: 283 SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALV 342
+F FF+ M+N RP+ F + +L S + +S +H LF++ + V V AL+
Sbjct: 109 AFSFFRLMVNRSVPRPNHFIYPLVLKSTPYLSSAFSTPLVHTHLFKSGFHLYVVVQTALL 168
Query: 343 NMYAKCGS-IGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDS 401
+ YA S I A ++F +MS RN++SW M++ + G A+ +FE M V
Sbjct: 169 HSYASSVSHITLARQLFDEMSERNVVSWTAMLSGYARSGDISNAVALFEDMPERDVP--- 225
Query: 402 VTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
++ +L AC +G+ + F M I PN C++ + G L ++ + I+
Sbjct: 226 -SWNAILAACTQNGLFLEAVSLFRRMINEPSIRPNEVTVVCVLSACAQTGTL-QLAKGIH 283
Query: 462 KFHHLND 468
F + D
Sbjct: 284 AFAYRRD 290
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 10/113 (8%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ +L C++T T G+HA + L S VFVSN L+++Y KCG + A VF
Sbjct: 262 TVVCVLSACAQTGTLQLAKGIHAFAYRRDLSSDVFVSNSLVDLYGKCGNLEEASSVFKMA 321
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM------KVLPNEFVFASTLSAC 107
S+++ +W++MI+ + G A+ +F +M + P+ F L+AC
Sbjct: 322 SKKSLTAWNSMINCFALHGRSEEAIAVFEEMMKLNINDIKPDHITFIGLLNAC 374
>AT1G77170.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:28998133-28999536 REVERSE
LENGTH=467
Length = 467
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/379 (29%), Positives = 204/379 (53%), Gaps = 3/379 (0%)
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+N ++ ++ + P +V+ M++ +PDR+S ++ + + DF G LH AV
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFL 285
+L + +++Y + E +VF ++ + SWN +I +H ++
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 286 FFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF--RTRQYWDVGVHNALVN 343
F +M + PDDFT S+ ASC Q+H + +T + D+ + N+L++
Sbjct: 205 MFVDM-KRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLID 263
Query: 344 MYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
MY KCG + A +F +M RN++SW++MI + +G A+E F QM+ GV+P+ +T
Sbjct: 264 MYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMREFGVRPNKIT 323
Query: 404 FTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
F G+L AC H G+V +G YF M++ + + P + H+ C++D+L R G+L E ++ + +
Sbjct: 324 FVGVLSACVHGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEEM 383
Query: 464 HHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVT 523
+ +V G L+ C G++ + E +A ++E+ P YV+L+N+YA GMW +V
Sbjct: 384 PMKPNVMVWGCLMGGCEKFGDVEMAEWVAPYMVELEPWNDGVYVVLANVYALRGMWKDVE 443
Query: 524 SARKMLKGSGLRKEPGYAW 542
RK++K + K P Y++
Sbjct: 444 RVRKLMKTKKVAKIPAYSY 462
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/327 (20%), Positives = 150/327 (45%), Gaps = 13/327 (3%)
Query: 68 WSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSL 124
W+ ++ Y + A+ ++ M VLP+ + + A + G+++H +++
Sbjct: 85 WNNIMRSYIRHESPLDAIQVYLGMVRSTVLPDRYSLPIVIKAAVQIHDFTLGKELHSVAV 144
Query: 125 RSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
R G+ F + IT+Y K G+ +A V+ + S+NA+I G + E
Sbjct: 145 RLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGLNHAGRANEAVE 204
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH--CQAVKLALDCTPLIGNVIMSM 242
+F M + G PD F+ V + L D LH K ++ N ++ M
Sbjct: 205 MFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKSDIMMLNSLIDM 264
Query: 243 YAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
Y + ++ +F ++ ++V+SW+++I ++ + ++ F++ M E +RP+ T
Sbjct: 265 YGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQ-MREFGVRPNKIT 323
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV--HNALVNMYAKCGSIGYAHKVFSK 360
F +L++C H + + + + ++ + G+ + +V++ ++ G + A KV +
Sbjct: 324 FVGVLSACV-HGGLVEEGKTYFAMMKSEFELEPGLSHYGCIVDLLSRDGQLKEAKKVVEE 382
Query: 361 MSYR-NLISWNTMIAA---FGNHGLGE 383
M + N++ W ++ FG+ + E
Sbjct: 383 MPMKPNVMVWGCLMGGCEKFGDVEMAE 409
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 5/195 (2%)
Query: 16 TMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY 75
T+ LH+ +++G F + + +Y K G ARKVFD ER SW+A+I G
Sbjct: 134 TLGKELHSVAVRLGFVGDEFCESGFITLYCKAGEFENARKVFDENPERKLGSWNAIIGGL 193
Query: 76 DQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
+ G A+ +F MK + P++F S ++C L L Q+H L++ S
Sbjct: 194 NHAGRANEAVEMFVDMKRSGLEPDDFTMVSVTASCGGLGDLSLAFQLHKCVLQAKTEEKS 253
Query: 133 FVS--NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
+ NSLI MY KCG+ A ++ N VS++++I G+ N + E F+ M
Sbjct: 254 DIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIVGYAANGNTLEALECFRQMR 313
Query: 191 QEGFVPDRFSFVGLL 205
+ G P++ +FVG+L
Sbjct: 314 EFGVRPNKITFVGVL 328
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 16 TMTFGLHAAVL--KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMIS 73
++ F LH VL K +S + + N L++MY KCGR+ LA +F+ M +RN VSWS+MI
Sbjct: 235 SLAFQLHKCVLQAKTEEKSDIMMLNSLIDMYGKCGRMDLASHIFEEMRQRNVVSWSSMIV 294
Query: 74 GYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSAC 107
GY G AL F QM+ V PN+ F LSAC
Sbjct: 295 GYAANGNTLEALECFRQMREFGVRPNKITFVGVLSAC 331
>AT5G15340.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:4982273-4984144 REVERSE
LENGTH=623
Length = 623
Score = 231 bits (588), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 143/480 (29%), Positives = 237/480 (49%), Gaps = 44/480 (9%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGY--ASISFVSNSLITMYMKCGQCSDALSVYANSV-- 159
L CA L G+++H + SG A S++SN+L Y G+ A ++
Sbjct: 13 LRHCAHRSFLRPGKELHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLS 72
Query: 160 GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMS 219
++V + L+S F ++F M ++ D S V L G L+D
Sbjct: 73 EKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQ 132
Query: 220 LHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFD- 278
H AVK+ + + + N +M MY + + EV R+F +++K V+SW +++ ++
Sbjct: 133 GHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEG 192
Query: 279 -DQGKSFL-----------------------------FFKEMMNECSIRPDDFTFASILA 308
++G+ EM+ C + T S+L+
Sbjct: 193 LERGREVFHEMPERNAVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLS 252
Query: 309 SCTWHASFLHGKQIHAFLFRTR-------QYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
+C + + G+ +H + + Y DV V ALV+MYAKCG+I + VF M
Sbjct: 253 ACAQSGNLVVGRWVHVYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLM 312
Query: 362 SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
RN+++WN + + HG G I++F QM E VKPD +TFT +L AC+HSG+V +G
Sbjct: 313 RKRNVVTWNALFSGLAMHGKGRMVIDMFPQMIRE-VKPDDLTFTAVLSACSHSGIVDEGW 371
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRV 481
F+S+ YG+ P + H++C++D+LGRAG + E E + + + VVLGSLL +C V
Sbjct: 372 RCFHSLRF-YGLEPKVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSV 430
Query: 482 HGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
HG + I ER+ + L+++ P T +L+SN+Y ++G + R L+ G+RK PG +
Sbjct: 431 HGKVEIAERIKRELIQMSPGNTEYQILMSNMYVAEGRSDIADGLRGSLRKRGIRKIPGLS 490
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 187/426 (43%), Gaps = 55/426 (12%)
Query: 21 LHAAVLKIGLQS--HVFVSNQLLNMYVKCGRVVLARKVFD--GMSERNTVSWSAMISGYD 76
LHA + GL+ ++SN L Y G +V A+K+FD +SE++ V W+ ++S +
Sbjct: 28 LHAVLTTSGLKKAPRSYLSNALFQFYASSGEMVTAQKLFDEIPLSEKDNVDWTTLLSSFS 87
Query: 77 QCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
+ G ++ LF +M+ V ++ CA L L QQ HG++++ G +
Sbjct: 88 RYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVCAKLEDLGFAQQGHGVAVKMGVLTSVK 147
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
V N+L+ MY KCG S+ ++ + VS+ ++ V+ E+G EVF M +
Sbjct: 148 VCNALMDMYGKCGLVSEVKRIFEELEEKSVVSWTVVLDTVVKWEGLERGREVFHEMPERN 207
Query: 194 FVPDRFSFVGLL--GFSTNLDDFRTGMSLHC-QAVKLALDCTPL---------------- 234
V G L GF+ + + M C + C+ L
Sbjct: 208 AVAWTVMVAGYLGAGFTREVLELLAEMVFRCGHGLNFVTLCSMLSACAQSGNLVVGRWVH 267
Query: 235 --------------------IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
+G ++ MYA+ I+ + VFRL++ ++V++WN L +
Sbjct: 268 VYALKKEMMMGEEASYDDVMVGTALVDMYAKCGNIDSSMNVFRLMRKRNVVTWNALFSGL 327
Query: 275 SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHG-KQIHAFLFRTRQYW 333
+ F +M+ E ++PDD TF ++L++C+ G + H+ F +
Sbjct: 328 AMHGKGRMVIDMFPQMIRE--VKPDDLTFTAVLSACSHSGIVDEGWRCFHSLRFYGLEP- 384
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSY-RNLISWNTMIAAFGNHGLGERAIEIFEQM 392
V + +V++ + G I A + +M N + +++ + HG +EI E++
Sbjct: 385 KVDHYACMVDLLGRAGLIEEAEILMREMPVPPNEVVLGSLLGSCSVHG----KVEIAERI 440
Query: 393 KAEGVK 398
K E ++
Sbjct: 441 KRELIQ 446
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 86/175 (49%), Gaps = 27/175 (15%)
Query: 306 ILASCTWHASFLH-GKQIHAFLFRT------RQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
+L C H SFL GK++HA L + R Y + NAL YA G + A K+F
Sbjct: 12 LLRHCA-HRSFLRPGKELHAVLTTSGLKKAPRSY----LSNALFQFYASSGEMVTAQKLF 66
Query: 359 SK--MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM 416
+ +S ++ + W T++++F +GL ++++F +M+ + V+ D V+ L C
Sbjct: 67 DEIPLSEKDNVDWTTLLSSFSRYGLLVNSMKLFVEMRRKRVEIDDVSVVCLFGVC----- 121
Query: 417 VRKGDLYFNSMEAAYGIAPNIGHFS------CLIDMLGRAGRLSEVEEYINKFHH 465
+ DL F + +G+A +G + L+DM G+ G +SEV+ +
Sbjct: 122 AKLEDLGF--AQQGHGVAVKMGVLTSVKVCNALMDMYGKCGLVSEVKRIFEELEE 174
>AT4G21065.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11246375-11247763 FORWARD
LENGTH=462
Length = 462
Score = 230 bits (586), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 110/333 (33%), Positives = 192/333 (57%), Gaps = 2/333 (0%)
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
D R G ++H ++ + N ++ +YA + +VF + +KD+++WN++IN
Sbjct: 3 DVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVIN 62
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
F+ ++ + EM N I+PD FT S+L++C + GK++H ++ +
Sbjct: 63 GFAENGKPEEALALYTEM-NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLT 121
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
++ N L+++YA+CG + A +F +M +N +SW ++I +G G+ AIE+F+ M
Sbjct: 122 RNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYM 181
Query: 393 KA-EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
++ EG+ P +TF G+L AC+H GMV++G YF M Y I P I HF C++D+L RAG
Sbjct: 182 ESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAG 241
Query: 452 RLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSN 511
++ + EYI + V+ +LL AC VHG+ + E +L++ P + YVLLSN
Sbjct: 242 QVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSN 301
Query: 512 LYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+YAS+ W++V RK + G++K PG++ ++
Sbjct: 302 MYASEQRWSDVQKIRKQMLRDGVKKVPGHSLVE 334
Score = 129 bits (324), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 149/299 (49%), Gaps = 38/299 (12%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H+ V++ G S ++V N LL++Y CG V A KVFD M E++ V+W+++I+G+ + G+
Sbjct: 10 IHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGK 69
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
AL L+++M + P+ F S LSACA + AL G+++H ++ G SN
Sbjct: 70 PEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNV 129
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ-EGFVP 196
L+ +Y +CG+ +A +++ V NSVS+ +LI G N ++ E+FK M EG +P
Sbjct: 130 LLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLP 189
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
+FVG+L + HC VK + F + E ++
Sbjct: 190 CEITFVGILYACS-----------HCGMVKEG--------------FEYFRRMREEYKIE 224
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
I+ + +++ + K++ + K M ++P+ + ++L +CT H
Sbjct: 225 PRIE-----HFGCMVDLLARAGQVKKAYEYIKSM----PMQPNVVIWRTLLGACTVHGD 274
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 136/270 (50%), Gaps = 8/270 (2%)
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
G+ IH + +RSG+ S+ +V NSL+ +Y CG + A V+ + V++N++I+GF E
Sbjct: 7 GETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAE 66
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
N +PE+ ++ M +G PD F+ V LL + G +H +K+ L
Sbjct: 67 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 126
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
NV++ +YA+ +EE +F + DK+ +SW +LI + ++ FK M +
Sbjct: 127 SNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEG 186
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH----NALVNMYAKCGSI 351
+ P + TF IL +C+ H + K+ + R R+ + + +V++ A+ G +
Sbjct: 187 LLPCEITFVGILYACS-HCGMV--KEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQV 243
Query: 352 GYAHKVFSKMSYR-NLISWNTMIAAFGNHG 380
A++ M + N++ W T++ A HG
Sbjct: 244 KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 273
>AT1G22830.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/569 (26%), Positives = 276/569 (48%), Gaps = 49/569 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LHA + GL+ + +L+ Y + A+ + + + + W+ +I Y +
Sbjct: 105 LHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
++ ++ +M + +EF + S + ACA+L G+ +HG S + +V N+
Sbjct: 165 FQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNA 224
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG---- 193
LI+MY + G+ A ++ ++VS+NA+I+ + + + F++ M G
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 194 ----------------FVPDRFSFVGL---------------LGFSTNLDDFRTGMSLHC 222
++ VG+ L +++ + G HC
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 223 QAVKLALDCT-----PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF 277
++ C+ + N +++MY++ + + VF+ ++ + +WN++I+ F++
Sbjct: 345 LVIR---SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
+ ++ KEM+ P+ T ASIL + HGK+ H ++ R + Y D +
Sbjct: 402 ERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 338 -HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
N+LV+MYAK G I A +VF M R+ +++ ++I +G G GE A+ F+ M G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
+KPD VT +L AC+HS +VR+G F ME +GI + H+SC++D+ RAG L +
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLA-KLLLEVPPVTTSPYVLLSNLYAS 515
+ + + + +LL AC +HGN IGE A KLLLE P Y+LL+++YA
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 516 DGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
G W+++ + + +L G++K +A ++
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 204/439 (46%), Gaps = 63/439 (14%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T ++++ C+ + F +H ++ + +++V N L++MY + G+V +AR++FD M
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 61 SERNTVSWSAMISGYD-----------------------------------QCGEHWMAL 85
SER+ VSW+A+I+ Y + G + AL
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 86 HLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYAS--ISFVSNSLIT 140
+ M+ V + L AC+ + AL G+ H L +RS S I V NSLIT
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
MY +C A V+ + ++N++ISGF N E+ + K ML GF P+ +
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLA--LDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
+L + + + G HC ++ DC ++ N ++ MYA+ I RVF
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCL-ILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS--- 315
++ +D +++ +LI+ + + +FK+ M+ I+PD T ++L++C+ H++
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKD-MDRSGIKPDHVTMVAVLSACS-HSNLVR 542
Query: 316 ---FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW-NT 371
+L K H F R R + ++ +V++Y + G + A +F + Y + T
Sbjct: 543 EGHWLFTKMEHVFGIRLR----LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 372 MIAA---FGNHGLGERAIE 387
++ A GN +GE A +
Sbjct: 599 LLKACLIHGNTNIGEWAAD 617
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 192/452 (42%), Gaps = 45/452 (9%)
Query: 79 GEHWMALHLFSQMKVLP--NEFVF---ASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
G+ + A FS ++ +EFV AS LS C V GQQ+H + SG S
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
+ L+T Y +A ++ NS + + +N LI ++ N ++ V+K M+ +G
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
D F++ ++ L DF G +H + C + N ++SMY +F ++
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM----------------------- 290
R+F + ++D +SWN +IN ++ + G++F M
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Query: 291 -----------MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY-WDV-GV 337
M C++R + L +C+ + GK H + R+ + D+ V
Sbjct: 300 NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
N+L+ MY++C + +A VF ++ +L +WN++I+ F + E + ++M G
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
P+ +T +L G ++ G + + + ++ L+DM ++G + +
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 458 EYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
+ D V SL+ +G + GE
Sbjct: 480 RVFDSMRK-RDKVTYTSLIDG---YGRLGKGE 507
>AT1G22830.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8076921-8079032 FORWARD
LENGTH=703
Length = 703
Score = 229 bits (584), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 148/569 (26%), Positives = 276/569 (48%), Gaps = 49/569 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LHA + GL+ + +L+ Y + A+ + + + + W+ +I Y +
Sbjct: 105 LHAHCISSGLEFDSVLVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKR 164
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
++ ++ +M + +EF + S + ACA+L G+ +HG S + +V N+
Sbjct: 165 FQESVSVYKRMMSKGIRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNA 224
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG---- 193
LI+MY + G+ A ++ ++VS+NA+I+ + + + F++ M G
Sbjct: 225 LISMYKRFGKVDVARRLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEAS 284
Query: 194 ----------------FVPDRFSFVGL---------------LGFSTNLDDFRTGMSLHC 222
++ VG+ L +++ + G HC
Sbjct: 285 IVTWNTIAGGCLEAGNYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHC 344
Query: 223 QAVKLALDCT-----PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF 277
++ C+ + N +++MY++ + + VF+ ++ + +WN++I+ F++
Sbjct: 345 LVIR---SCSFSHDIDNVRNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYN 401
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
+ ++ KEM+ P+ T ASIL + HGK+ H ++ R + Y D +
Sbjct: 402 ERSEETSFLLKEMLLS-GFHPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLI 460
Query: 338 -HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
N+LV+MYAK G I A +VF M R+ +++ ++I +G G GE A+ F+ M G
Sbjct: 461 LWNSLVDMYAKSGEIIAAKRVFDSMRKRDKVTYTSLIDGYGRLGKGEVALAWFKDMDRSG 520
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
+KPD VT +L AC+HS +VR+G F ME +GI + H+SC++D+ RAG L +
Sbjct: 521 IKPDHVTMVAVLSACSHSNLVREGHWLFTKMEHVFGIRLRLEHYSCMVDLYCRAGYLDKA 580
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLA-KLLLEVPPVTTSPYVLLSNLYAS 515
+ + + + +LL AC +HGN IGE A KLLLE P Y+LL+++YA
Sbjct: 581 RDIFHTIPYEPSSAMCATLLKACLIHGNTNIGEWAADKLLLETKPEHLGHYMLLADMYAV 640
Query: 516 DGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
G W+++ + + +L G++K +A ++
Sbjct: 641 TGSWSKLVTVKTLLSDLGVQKAHEFALME 669
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/439 (25%), Positives = 204/439 (46%), Gaps = 63/439 (14%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T ++++ C+ + F +H ++ + +++V N L++MY + G+V +AR++FD M
Sbjct: 186 TYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVARRLFDRM 245
Query: 61 SERNTVSWSAMISGYD-----------------------------------QCGEHWMAL 85
SER+ VSW+A+I+ Y + G + AL
Sbjct: 246 SERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAGNYIGAL 305
Query: 86 HLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYAS--ISFVSNSLIT 140
+ M+ V + L AC+ + AL G+ H L +RS S I V NSLIT
Sbjct: 306 NCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNVRNSLIT 365
Query: 141 MYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
MY +C A V+ + ++N++ISGF N E+ + K ML GF P+ +
Sbjct: 366 MYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGFHPNHIT 425
Query: 201 FVGLLGFSTNLDDFRTGMSLHCQAVKLA--LDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
+L + + + G HC ++ DC ++ N ++ MYA+ I RVF
Sbjct: 426 LASILPLFARVGNLQHGKEFHCYILRRQSYKDCL-ILWNSLVDMYAKSGEIIAAKRVFDS 484
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS--- 315
++ +D +++ +LI+ + + +FK+ M+ I+PD T ++L++C+ H++
Sbjct: 485 MRKRDKVTYTSLIDGYGRLGKGEVALAWFKD-MDRSGIKPDHVTMVAVLSACS-HSNLVR 542
Query: 316 ---FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW-NT 371
+L K H F R R + ++ +V++Y + G + A +F + Y + T
Sbjct: 543 EGHWLFTKMEHVFGIRLR----LEHYSCMVDLYCRAGYLDKARDIFHTIPYEPSSAMCAT 598
Query: 372 MIAA---FGNHGLGERAIE 387
++ A GN +GE A +
Sbjct: 599 LLKACLIHGNTNIGEWAAD 617
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/452 (22%), Positives = 192/452 (42%), Gaps = 45/452 (9%)
Query: 79 GEHWMALHLFSQMKVLP--NEFVF---ASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
G+ + A FS ++ +EFV AS LS C V GQQ+H + SG S
Sbjct: 60 GQLYEAFRTFSLLRYQSGSHEFVLYSSASLLSTCVGFNEFVPGQQLHAHCISSGLEFDSV 119
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
+ L+T Y +A ++ NS + + +N LI ++ N ++ V+K M+ +G
Sbjct: 120 LVPKLVTFYSAFNLLDEAQTITENSEILHPLPWNVLIGSYIRNKRFQESVSVYKRMMSKG 179
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
D F++ ++ L DF G +H + C + N ++SMY +F ++
Sbjct: 180 IRADEFTYPSVIKACAALLDFAYGRVVHGSIEVSSHRCNLYVCNALISMYKRFGKVDVAR 239
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM----------------------- 290
R+F + ++D +SWN +IN ++ + G++F M
Sbjct: 240 RLFDRMSERDAVSWNAIINCYTSEEKLGEAFKLLDRMYLSGVEASIVTWNTIAGGCLEAG 299
Query: 291 -----------MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY-WDV-GV 337
M C++R + L +C+ + GK H + R+ + D+ V
Sbjct: 300 NYIGALNCVVGMRNCNVRIGSVAMINGLKACSHIGALKWGKVFHCLVIRSCSFSHDIDNV 359
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
N+L+ MY++C + +A VF ++ +L +WN++I+ F + E + ++M G
Sbjct: 360 RNSLITMYSRCSDLRHAFIVFQQVEANSLSTWNSIISGFAYNERSEETSFLLKEMLLSGF 419
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
P+ +T +L G ++ G + + + ++ L+DM ++G + +
Sbjct: 420 HPNHITLASILPLFARVGNLQHGKEFHCYILRRQSYKDCLILWNSLVDMYAKSGEIIAAK 479
Query: 458 EYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
+ D V SL+ +G + GE
Sbjct: 480 RVFDSMRK-RDKVTYTSLIDG---YGRLGKGE 507
>AT5G08510.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2753099-2754731 FORWARD
LENGTH=511
Length = 511
Score = 229 bits (583), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 135/459 (29%), Positives = 226/459 (49%), Gaps = 36/459 (7%)
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+Q+H LR+G + L+ + A ++ + + + YN LI + +
Sbjct: 5 KQLHAHCLRTGVDE----TKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVH 60
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD-----C 231
H+P + ++ L+ +G P +F + S + R LH Q + + C
Sbjct: 61 HQPHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCC 120
Query: 232 TPLIG--------------------------NVIMSMYAQFNFIEEVVRVFRLIQDKDVI 265
T LI N +++ Y + ++ + +F + K+V
Sbjct: 121 TTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVT 180
Query: 266 SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAF 325
SW T+I+ FS + ++ F M + S++P+ T S+L +C G+++ +
Sbjct: 181 SWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGY 240
Query: 326 LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM-SYRNLISWNTMIAAFGNHGLGER 384
+ ++ V NA + MY+KCG I A ++F ++ + RNL SWN+MI + HG +
Sbjct: 241 ARENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDE 300
Query: 385 AIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLI 444
A+ +F QM EG KPD+VTF GLL+AC H GMV KG F SME + I+P + H+ C+I
Sbjct: 301 ALTLFAQMLREGEKPDAVTFVGLLLACVHGGMVVKGQELFKSMEEVHKISPKLEHYGCMI 360
Query: 445 DMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTS 504
D+LGR G+L E + I D VV G+LL AC HGN+ I E ++ L ++ P
Sbjct: 361 DLLGRVGKLQEAYDLIKTMPMKPDAVVWGTLLGACSFHGNVEIAEIASEALFKLEPTNPG 420
Query: 505 PYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
V++SN+YA++ W+ V RK++K + K GY++
Sbjct: 421 NCVIMSNIYAANEKWDGVLRMRKLMKKETMTKAAGYSYF 459
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 140/332 (42%), Gaps = 72/332 (21%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH+ + G +S F L+ Y K G + AR+VFD MS+R+ W+AMI+GY + G+
Sbjct: 104 LHSQFFRSGFESDSFCCTTLITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGD 163
Query: 81 HWMALHLFSQMK-----------------------------------VLPNEFVFASTLS 105
A+ LF M V PN S L
Sbjct: 164 MKAAMELFDSMPRKNVTSWTTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLP 223
Query: 106 ACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT--NS 163
ACA+L L G+++ G + +G+ +V N+ I MY KCG A ++ +G N
Sbjct: 224 ACANLGELEIGRRLEGYARENGFFDNIYVCNATIEMYSKCGMIDVAKRLF-EELGNQRNL 282
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
S+N++I + + ++ +F ML+EG PD +FVGLL
Sbjct: 283 CSWNSMIGSLATHGKHDEALTLFAQMLREGEKPDAVTFVGLL------------------ 324
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
L C G +++ F +EEV ++ ++ + +I+ ++
Sbjct: 325 -----LACVH--GGMVVKGQELFKSMEEVHKISPKLE-----HYGCMIDLLGRVGKLQEA 372
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
+ K M ++PD + ++L +C++H +
Sbjct: 373 YDLIKTM----PMKPDAVVWGTLLGACSFHGN 400
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 104/451 (23%), Positives = 183/451 (40%), Gaps = 77/451 (17%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY---DQ 77
LHA L+ G+ + LL + +V ARK+FD T ++ +I Y Q
Sbjct: 7 LHAHCLRTGVDE----TKDLLQRLLLIPNLVYARKLFDHHQNSCTFLYNKLIQAYYVHHQ 62
Query: 78 CGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNS 137
E + +L S + P+ F +A AS + + +H RSG+ S SF +
Sbjct: 63 PHESIVLYNLLSFDGLRPSHHTFNFIFAASASFSSARPLRLLHSQFFRSGFESDSFCCTT 122
Query: 138 LITMYMKCGQ--CSD-----------------------------ALSVYANSVGTNSVSY 166
LIT Y K G C+ A+ ++ + N S+
Sbjct: 123 LITAYAKLGALCCARRVFDEMSKRDVPVWNAMITGYQRRGDMKAAMELFDSMPRKNVTSW 182
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+ISGF +N + ++F M ++ V P+ + V +L NL + G L A
Sbjct: 183 TTVISGFSQNGNYSEALKMFLCMEKDKSVKPNHITVVSVLPACANLGELEIGRRLEGYAR 242
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVF-RLIQDKDVISWNTLINAFSHFDDQGKSF 284
+ + N + MY++ I+ R+F L +++ SWN++I + + ++
Sbjct: 243 ENGFFDNIYVCNATIEMYSKCGMIDVAKRLFEELGNQRNLCSWNSMIGSLATHGKHDEAL 302
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
F +M+ E +PD TF +L +C + G++ LF+
Sbjct: 303 TLFAQMLREGE-KPDAVTFVGLLLACVHGGMVVKGQE----LFK---------------- 341
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
S+ HK+ K+ + + MI G G + A ++ + M +KPD+V +
Sbjct: 342 -----SMEEVHKISPKLEH-----YGCMIDLLGRVGKLQEAYDLIKTMP---MKPDAVVW 388
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
LL AC+ G V ++ + EA + + P
Sbjct: 389 GTLLGACSFHGNVEIAEI---ASEALFKLEP 416
>AT5G37570.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:14924494-14926146 REVERSE
LENGTH=550
Length = 550
Score = 228 bits (581), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 155/551 (28%), Positives = 266/551 (48%), Gaps = 22/551 (3%)
Query: 3 LETIGTLLQRCSKTMTFG-LHAAVLKIGL-QSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
L ++ TL + C + +HA +++ GL Q +S + + + + VF+ +
Sbjct: 10 LLSLETLFKLCKSEIHLNQIHARIIRKGLEQDQNLISIFISSSSSSSSSLSYSSSVFERV 69
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQG 116
T W+ +I GY + + + +M P+E+ F + C++ + G
Sbjct: 70 PSPGTYLWNHLIKGYSNKFLFFETVSILMRMMRTGLARPDEYTFPLVMKVCSNNGQVRVG 129
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
+HGL LR G+ V S + Y KC A V+ N+VS+ AL+ +V++
Sbjct: 130 SSVHGLVLRIGFDKDVVVGTSFVDFYGKCKDLFSARKVFGEMPERNAVSWTALVVAYVKS 189
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDD--FRTGMSLHCQAVKLALDCTPL 234
E E+ +F LM P+R LG L D ++G ++ + + + +
Sbjct: 190 GELEEAKSMFDLM------PERN-----LGSWNALVDGLVKSGDLVNAKKLFDEMPKRDI 238
Query: 235 IGNVIM-SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNE 293
I M YA+ + +F + DV +W+ LI ++ ++F F EM +
Sbjct: 239 ISYTSMIDGYAKGGDMVSARDLFEEARGVDVRAWSALILGYAQNGQPNEAFKVFSEMCAK 298
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLF-RTRQYWDVGVHNALVNMYAKCGSIG 352
+++PD+F ++++C+ F +++ ++L R ++ V AL++M AKCG +
Sbjct: 299 -NVKPDEFIMVGLMSACSQMGCFELCEKVDSYLHQRMNKFSSHYVVPALIDMNAKCGHMD 357
Query: 353 YAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
A K+F +M R+L+S+ +M+ HG G AI +FE+M EG+ PD V FT +L C
Sbjct: 358 RAAKLFEEMPQRDLVSYCSMMEGMAIHGCGSEAIRLFEKMVDEGIVPDEVAFTVILKVCG 417
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL 472
S +V +G YF M Y I + H+SC++++L R G+L E E I
Sbjct: 418 QSRLVEEGLRYFELMRKKYSILASPDHYSCIVNLLSRTGKLKEAYELIKSMPFEAHASAW 477
Query: 473 GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGS 532
GSLL C +HGN I E +A+ L E+ P + YVLLSN+YA+ W +V R + +
Sbjct: 478 GSLLGGCSLHGNTEIAEVVARHLFELEPQSAGSYVLLSNIYAALDRWTDVAHLRDKMNEN 537
Query: 533 GLRKEPGYAWL 543
G+ K G +W+
Sbjct: 538 GITKICGRSWI 548
>AT2G45350.1 | Symbols: CRR4 | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:18694816-18696657 REVERSE
LENGTH=613
Length = 613
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 142/481 (29%), Positives = 236/481 (49%), Gaps = 38/481 (7%)
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY 155
++F + L AC+ L + G QIHG ++G S F+ N LI +Y+KCG + ++
Sbjct: 120 DKFSLSLVLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMF 179
Query: 156 ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLDDF 214
+SVSYN++I G+V+ E+F LM E + + S+ ++ G++ D
Sbjct: 180 DRMPKRDSVSYNSMIDGYVKCGLIVSARELFDLMPME--MKNLISWNSMISGYAQTSDGV 237
Query: 215 RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
L + L + N ++ Y + IE+ +F ++ +DV++W T+I+ +
Sbjct: 238 DIASKLFADMPEKDL----ISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGY 293
Query: 275 SH----------FDD-----------------QGK----SFLFFKEMMNECSIRPDDFTF 303
+ FD Q K + F +M E + PDD T
Sbjct: 294 AKLGFVHHAKTLFDQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTL 353
Query: 304 ASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSY 363
+L + +H ++ + Y + AL++MY+KCGSI +A VF +
Sbjct: 354 VIVLPAIAQLGRLSKAIDMHLYIVEKQFYLGGKLGVALIDMYSKCGSIQHAMLVFEGIEN 413
Query: 364 RNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLY 423
+++ WN MI HGLGE A ++ Q++ +KPD +TF G+L AC+HSG+V++G L
Sbjct: 414 KSIDHWNAMIGGLAIHGLGESAFDMLLQIERLSLKPDDITFVGVLNACSHSGLVKEGLLC 473
Query: 424 FNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
F M + I P + H+ C++D+L R+G + + I + + V+ + L+AC H
Sbjct: 474 FELMRRKHKIEPRLQHYGCMVDILSRSGSIELAKNLIEEMPVEPNDVIWRTFLTACSHHK 533
Query: 484 NMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
GE +AK L+ S YVLLSN+YAS GMW +V R M+K + K PG +W+
Sbjct: 534 EFETGELVAKHLILQAGYNPSSYVLLSNMYASFGMWKDVRRVRTMMKERKIEKIPGCSWI 593
Query: 544 K 544
+
Sbjct: 594 E 594
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 180/392 (45%), Gaps = 35/392 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H + K GL S +F+ N L+ +Y+KCG + L+R++FD M +R++VS+++MI GY +CG
Sbjct: 143 IHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRDSVSYNSMIDGYVKCGL 202
Query: 81 HWMALHLFSQMKV-LPNEFVFASTLSACAS-----------LRALVQGQQIHGLSLRSGY 128
A LF M + + N + S +S A + + I S+ GY
Sbjct: 203 IVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFADMPEKDLISWNSMIDGY 262
Query: 129 ASISFVSN-----------------SLITMYMKCGQCSDALSVYANSVGTNSVSYNALIS 171
+ + ++I Y K G A +++ + V+YN++++
Sbjct: 263 VKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLFDQMPHRDVVAYNSMMA 322
Query: 172 GFVENHEPEKGFEVFKLMLQEG-FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD 230
G+V+N + E+F M +E +PD + V +L L + +H V+
Sbjct: 323 GYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRLSKAIDMHLYIVEKQFY 382
Query: 231 CTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM 290
+G ++ MY++ I+ + VF I++K + WN +I + G+S
Sbjct: 383 LGGKLGVALIDMYSKCGSIQHAMLVFEGIENKSIDHWNAMIGGLA-IHGLGESAFDMLLQ 441
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV--HNALVNMYAKC 348
+ S++PDD TF +L +C+ H+ + + L R + + + + +V++ ++
Sbjct: 442 IERLSLKPDDITFVGVLNACS-HSGLVKEGLLCFELMRRKHKIEPRLQHYGCMVDILSRS 500
Query: 349 GSIGYAHKVFSKMSYR-NLISWNTMIAAFGNH 379
GSI A + +M N + W T + A +H
Sbjct: 501 GSIELAKNLIEEMPVEPNDVIWRTFLTACSHH 532
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 98/454 (21%), Positives = 192/454 (42%), Gaps = 58/454 (12%)
Query: 97 EFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYA 156
E +ST+ S + QIHG +++G S ++ ++ + + L+ +A
Sbjct: 9 ECSISSTIHVLGSCKTSDDVNQIHGRLIKTGIIKNSNLTTRIVLAFASSRR--PYLADFA 66
Query: 157 NSV-------------GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVG 203
V + +NA+I +P + + LML+ G D+FS
Sbjct: 67 RCVFHEYHVCSFSFGEVEDPFLWNAVIKSHSHGKDPRQALLLLCLMLENGVSVDKFSLSL 126
Query: 204 LLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKD 263
+L + L + GM +H K L + N ++ +Y + + ++F + +D
Sbjct: 127 VLKACSRLGFVKGGMQIHGFLKKTGLWSDLFLQNCLIGLYLKCGCLGLSRQMFDRMPKRD 186
Query: 264 VISWNTLINAFSH----------FD---DQGKSFLFFKEMMNECSIRPDDFTFASILAS- 309
+S+N++I+ + FD + K+ + + M++ + D AS L +
Sbjct: 187 SVSYNSMIDGYVKCGLIVSARELFDLMPMEMKNLISWNSMISGYAQTSDGVDIASKLFAD 246
Query: 310 ------CTWHASF----LHGKQIHAF-LFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
+W++ HG+ A LF DV +++ YAK G + +A +F
Sbjct: 247 MPEKDLISWNSMIDGYVKHGRIEDAKGLFDVMPRRDVVTWATMIDGYAKLGFVHHAKTLF 306
Query: 359 SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMV 417
+M +R+++++N+M+A + + A+EIF M+ E + PD T +L A G +
Sbjct: 307 DQMPHRDVVAYNSMMAGYVQNKYHMEALEIFSDMEKESHLLPDDTTLVIVLPAIAQLGRL 366
Query: 418 RKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV----EEYINK-FHHLNDPVV 471
K D++ +E + + +G LIDM + G + E NK H N
Sbjct: 367 SKAIDMHLYIVEKQFYLGGKLG--VALIDMYSKCGSIQHAMLVFEGIENKSIDHWN---- 420
Query: 472 LGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSP 505
+++ +HG +GE +LL++ ++ P
Sbjct: 421 --AMIGGLAIHG---LGESAFDMLLQIERLSLKP 449
>AT3G56550.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20952896-20954641 REVERSE
LENGTH=581
Length = 581
Score = 226 bits (576), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 117/380 (30%), Positives = 206/380 (54%), Gaps = 2/380 (0%)
Query: 166 YNALISGFVENHEPEKGFEVF-KLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQA 224
+N LI GF + P + +++L PD F+F L + + +H
Sbjct: 74 WNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPKCLEIHGSV 133
Query: 225 VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSF 284
++ ++ ++ Y+ +E +VF + +D++SWN +I FSH ++
Sbjct: 134 IRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSHVGLHNQAL 193
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
+K M NE + D +T ++L+SC ++ G +H R V V NAL++M
Sbjct: 194 SMYKRMGNE-GVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFVSNALIDM 252
Query: 345 YAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTF 404
YAKCGS+ A VF+ M R++++WN+MI +G HG G AI F +M A GV+P+++TF
Sbjct: 253 YAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVASGVRPNAITF 312
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH 464
GLL+ C+H G+V++G +F M + + + PN+ H+ C++D+ GRAG+L E I
Sbjct: 313 LGLLLGCSHQGLVKEGVEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLENSLEMIYASS 372
Query: 465 HLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTS 524
DPV+ +LL +C++H N+ +GE K L+++ YVL++++Y++ S
Sbjct: 373 CHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFAS 432
Query: 525 ARKMLKGSGLRKEPGYAWLK 544
RK+++ L+ PG++W++
Sbjct: 433 MRKLIRSHDLQTVPGWSWIE 452
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/424 (23%), Positives = 195/424 (45%), Gaps = 19/424 (4%)
Query: 4 ETIGTLLQRCSKTMTF-GLHAAVLKIGLQSHVFVSNQLLNMYVK--CGRVVLARKVFDGM 60
I +LQ C+ +H+ V+ GLQ H + N LL G + A+ +FD
Sbjct: 6 RVIVRMLQGCNSMKKLRKIHSHVIINGLQHHPSIFNHLLRFCAVSVTGSLSHAQLLFDHF 65
Query: 61 -SERNTVSWSAMISGYDQCGEHWMALHLFSQMKV----LPNEFVFASTLSACASLRALVQ 115
S+ +T W+ +I G+ ++ +++M + P+ F F L +C ++++ +
Sbjct: 66 DSDPSTSDWNYLIRGFSNSSSPLNSILFYNRMLLSSVSRPDLFTFNFALKSCERIKSIPK 125
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
+IHG +RSG+ + V+ SL+ Y G A V+ + VS+N +I F
Sbjct: 126 CLEIHGSVIRSGFLDDAIVATSLVRCYSANGSVEIASKVFDEMPVRDLVSWNVMICCFSH 185
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ ++K M EG D ++ V LL ++ G+ LH A + + +
Sbjct: 186 VGLHNQALSMYKRMGNEGVCGDSYTLVALLSSCAHVSALNMGVMLHRIACDIRCESCVFV 245
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
N ++ MYA+ +E + VF ++ +DV++WN++I + ++ FF++M+
Sbjct: 246 SNALIDMYAKCGSLENAIGVFNGMRKRDVLTWNSMIIGYGVHGHGVEAISFFRKMVAS-G 304
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNMYAKCGSIG 352
+RP+ TF +L C+ G + F + Q+ +V + +V++Y + G +
Sbjct: 305 VRPNAITFLGLLLGCSHQGLVKEG--VEHFEIMSSQFHLTPNVKHYGCMVDLYGRAGQLE 362
Query: 353 YA-HKVFSKMSYRNLISWNTMIAAFGNH---GLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
+ +++ + + + W T++ + H LGE A++ Q++A D V T +
Sbjct: 363 NSLEMIYASSCHEDPVLWRTLLGSCKIHRNLELGEVAMKKLVQLEAFNAG-DYVLMTSIY 421
Query: 409 IACN 412
A N
Sbjct: 422 SAAN 425
>AT5G50390.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:20520789-20522980 REVERSE
LENGTH=701
Length = 701
Score = 226 bits (576), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 141/493 (28%), Positives = 246/493 (49%), Gaps = 9/493 (1%)
Query: 58 DGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFAST----LSACASLRAL 113
D ++ V+ + I C A LF +++ + V ST + AC L+++
Sbjct: 80 DTQISKSGVTICSQIEKLVLCNRFREAFELFEILEIRCSFKVGVSTYDALVEACIRLKSI 139
Query: 114 VQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGF 173
++++G + +G+ ++ N ++ M++KCG DA ++ N SY ++ISGF
Sbjct: 140 RCVKRVYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSIISGF 199
Query: 174 VENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP 233
V + FE+FK+M +E + +F +L S L G LH A+KL +
Sbjct: 200 VNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGVVDNT 259
Query: 234 LIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS--HFDDQGKSFLFFKEMM 291
+ ++ MY++ IE+ F + +K ++WN +I ++ + ++ L+ M
Sbjct: 260 FVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLY---DM 316
Query: 292 NECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI 351
+ + D FT + ++ T A KQ HA L R ++ + ALV+ Y+K G +
Sbjct: 317 RDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGRV 376
Query: 352 GYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
A VF K+ +N+ISWN ++ + NHG G A+++FE+M A V P+ VTF +L AC
Sbjct: 377 DTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMIAANVAPNHVTFLAVLSAC 436
Query: 412 NHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVV 471
+SG+ +G F SM +GI P H++C+I++LGR G L E +I + +
Sbjct: 437 AYSGLSEQGWEIFLSMSEVHGIKPRAMHYACMIELLGRDGLLDEAIAFIRRAPLKTTVNM 496
Query: 472 LGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKG 531
+LL+ACR+ N+ +G +A+ L + P YV++ N+Y S G E + L+
Sbjct: 497 WAALLNACRMQENLELGRVVAEKLYGMGPEKLGNYVVMYNMYNSMGKTAEAAGVLETLES 556
Query: 532 SGLRKEPGYAWLK 544
GL P W++
Sbjct: 557 KGLSMMPACTWVE 569
Score = 133 bits (335), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/448 (23%), Positives = 203/448 (45%), Gaps = 45/448 (10%)
Query: 12 RCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAM 71
RC K ++ ++ G + ++ N++L M+VKCG ++ AR++FD + ERN S+ ++
Sbjct: 140 RCVKR----VYGFMMSNGFEPEQYMMNRILLMHVKCGMIIDARRLFDEIPERNLYSYYSI 195
Query: 72 ISGYDQCGEHWMALHLFSQM-KVLPN--EFVFASTLSACASLRALVQGQQIHGLSLRSGY 128
ISG+ G + A LF M + L + FA L A A L ++ G+Q+H +L+ G
Sbjct: 196 ISGFVNFGNYVEAFELFKMMWEELSDCETHTFAVMLRASAGLGSIYVGKQLHVCALKLGV 255
Query: 129 ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
+FVS LI MY KCG DA + +V++N +I+G+ + E+ +
Sbjct: 256 VDNTFVSCGLIDMYSKCGDIEDARCAFECMPEKTTVAWNNVIAGYALHGYSEEALCLLYD 315
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
M G D+F+ ++ ST L H ++ + + ++ Y+++
Sbjct: 316 MRDSGVSIDQFTLSIMIRISTKLAKLELTKQAHASLIRNGFESEIVANTALVDFYSKWGR 375
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
++ VF + K++ISWN L+ +++ + F++M+ ++ P+ TF ++L+
Sbjct: 376 VDTARYVFDKLPRKNIISWNALMGGYANHGRGTDAVKLFEKMI-AANVAPNHVTFLAVLS 434
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
+C A+ + Q W++ + S+ H + + +
Sbjct: 435 AC-------------AYSGLSEQGWEIFL------------SMSEVHGIKPRA-----MH 464
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
+ MI G GL + AI ++ +K + LL AC + G + E
Sbjct: 465 YACMIELLGRDGLLDEAIAF---IRRAPLKTTVNMWAALLNACRMQENLELGRVV---AE 518
Query: 429 AAYGIAP-NIGHFSCLIDMLGRAGRLSE 455
YG+ P +G++ + +M G+ +E
Sbjct: 519 KLYGMGPEKLGNYVVMYNMYNSMGKTAE 546
>AT4G37380.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:17572040-17573938 REVERSE
LENGTH=632
Length = 632
Score = 226 bits (575), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 235/462 (50%), Gaps = 39/462 (8%)
Query: 118 QIHGLSLRSG---YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFV 174
QIH LR + ++ L Y G+ +L+++ ++ + + A I+
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
N ++ F ++ +L P+ F+F LL + ++G +H +K L P
Sbjct: 107 INGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPY 162
Query: 235 I-----------GNVI--------------------MSMYAQFNFIEEVVRVFRLIQDKD 263
+ G+V+ ++ YA+ +E +F + ++D
Sbjct: 163 VATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERD 222
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
++SWN +I+ ++ + + F++++ E +PD+ T + L++C+ + G+ IH
Sbjct: 223 IVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIH 282
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
F+ +R +V V L++MY+KCGS+ A VF+ +++++WN MIA + HG +
Sbjct: 283 VFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQ 342
Query: 384 RAIEIFEQMKA-EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSC 442
A+ +F +M+ G++P +TF G L AC H+G+V +G F SM YGI P I H+ C
Sbjct: 343 DALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGC 402
Query: 443 LIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVT 502
L+ +LGRAG+L E I + D V+ S+L +C++HG+ +G+ +A+ L+ +
Sbjct: 403 LVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKN 462
Query: 503 TSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ YVLLSN+YAS G + V R ++K G+ KEPG + ++
Sbjct: 463 SGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIE 504
Score = 112 bits (279), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 103/404 (25%), Positives = 165/404 (40%), Gaps = 81/404 (20%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD------ 58
T +LL+ CS +H VLK GL +V+ L+++Y K G VV A+KVFD
Sbjct: 132 TFSSLLKSCSTKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERS 191
Query: 59 -------------------------GMSERNTVSWSAMISGYDQCGEHWMALHLFSQM-- 91
M ER+ VSW+ MI GY Q G AL LF ++
Sbjct: 192 LVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLA 251
Query: 92 --KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCS 149
K P+E + LSAC+ + AL G+ IH S V LI MY KCG
Sbjct: 252 EGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLE 311
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ-EGFVPDRFSFVGLLGFS 208
+A+ V+ ++ + V++NA+I+G+ + + +F M G P +F+G L
Sbjct: 312 EAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGTL--- 368
Query: 209 TNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK-----D 263
QA A + E +R+F + +
Sbjct: 369 --------------QAC------------------AHAGLVNEGIRIFESMGQEYGIKPK 396
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
+ + L++ +++ K M ++ D ++S+L SC H F+ GK+I
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNM----NMDADSVLWSSVLGSCKLHGDFVLGKEIA 452
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI 367
+L + G++ L N+YA G KV + M + ++
Sbjct: 453 EYLIGL-NIKNSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIV 495
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 177/407 (43%), Gaps = 58/407 (14%)
Query: 21 LHAAVLKIGLQSHV---FVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQ 77
+HAA+L+ L H ++ +L Y G++ + +F + + ++A I+
Sbjct: 48 IHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTASI 107
Query: 78 CGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
G A L+ Q+ ++ PNEF F+S L +C++ G+ IH L+ G +V
Sbjct: 108 NGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPYV 163
Query: 135 -------------------------------SNSLITMYMKCGQCSDALSVYANSVGTNS 163
S ++IT Y K G A +++ + +
Sbjct: 164 ATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDI 223
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLH- 221
VS+N +I G+ ++ P +F+ +L EG PD + V L + + TG +H
Sbjct: 224 VSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHV 283
Query: 222 -CQAVKLALD---CTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF 277
++ ++ L+ CT LI MY++ +EE V VF KD+++WN +I ++
Sbjct: 284 FVKSSRIRLNVKVCTGLI-----DMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMH 338
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW---D 334
+ F EM ++P D TF L +C HA ++ + I F ++Y
Sbjct: 339 GYSQDALRLFNEMQGITGLQPTDITFIGTLQACA-HAGLVN-EGIRIFESMGQEYGIKPK 396
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG 380
+ + LV++ + G + A++ M+ + + W++++ + HG
Sbjct: 397 IEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHG 443
>AT1G23450.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:8324698-8326697 FORWARD
LENGTH=666
Length = 666
Score = 225 bits (573), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 144/549 (26%), Positives = 272/549 (49%), Gaps = 14/549 (2%)
Query: 5 TIGTLLQRCSKTM----TFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVV-LARKVFDG 59
T ++L CS + +H V+ +G ++FV + L+ +Y C R+V +A K+FD
Sbjct: 114 TFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYA-CLRLVDVALKLFDE 172
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQG 116
M +RN + ++ + Q GE ++ +M+ V N + + C+ R + +G
Sbjct: 173 MLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSHDRLVYEG 232
Query: 117 QQIHGLSLRSGY-ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVE 175
+Q+H L ++SG+ S FV+N L+ Y CG S ++ + + +S+N+++S +
Sbjct: 233 KQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNSIVSVCAD 292
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL- 234
++F M G P F+ L F + D ++G +HC +K+ D + L
Sbjct: 293 YGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSGKQIHCYVLKMGFDVSSLH 352
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
+ + ++ MY + N IE +++ + ++ N+L+ + H F M++E
Sbjct: 353 VQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITKDIIEMFGLMIDE- 411
Query: 295 SIRPDDFTFASILA--SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
D+ T +++L S + S +H ++ DV V +L++ Y K G
Sbjct: 412 GTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCSLIDAYTKSGQNE 471
Query: 353 YAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
+ KVF ++ N+ ++I + +G+G +++ +M + PD VT +L C+
Sbjct: 472 VSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPDEVTILSVLSGCS 531
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVL 472
HSG+V +G+L F+S+E+ YGI+P ++C++D+LGRAG + + E + + D V
Sbjct: 532 HSGLVEEGELIFDSLESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAW 591
Query: 473 GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGS 532
SLL +CR+H N IG R A++L+ + P + Y+ +S Y G + R++
Sbjct: 592 SSLLQSCRIHRNETIGRRAAEVLMNLEPENFAVYIQVSKFYFEIGDFEISRQIREIAASR 651
Query: 533 GLRKEPGYA 541
L +E GY+
Sbjct: 652 ELMREIGYS 660
Score = 140 bits (353), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/501 (24%), Positives = 227/501 (45%), Gaps = 51/501 (10%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM-- 91
V+ N+ ++ +K G ++ A + FD MS R+ V+++ +ISG + G A+ L+++M
Sbjct: 46 VYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAIELYAEMVS 105
Query: 92 -KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
+ + F S LS C+ +G Q+H + G+ FV ++L+ +Y
Sbjct: 106 CGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLYACLRLVDV 165
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
AL ++ + N N L+ F + E ++ FEV+ M EG + ++ ++ ++
Sbjct: 166 ALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELEGVAKNGLTYCYMIRGCSH 225
Query: 211 LDDFRTGMSLHCQAVKLALDCTPL-IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
G LH VK + + + + NV++ Y+ + +R F + +KDVISWN+
Sbjct: 226 DRLVYEGKQLHSLVVKSGWNISNIFVANVLVDYYSACGDLSGSMRSFNAVPEKDVISWNS 285
Query: 270 LINAFSHFDDQGKSFLFFKEMM---NECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
+++ + + S F +M SIRP F S L C+ ++ GKQIH ++
Sbjct: 286 IVSVCADYGSVLDSLDLFSKMQFWGKRPSIRP----FMSFLNFCSRNSDIQSGKQIHCYV 341
Query: 327 FRTRQYWDVG---VHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
+ +DV V +AL++MY KC I + ++ + NL N+++ + + G+ +
Sbjct: 342 LKMG--FDVSSLHVQSALIDMYGKCNGIENSALLYQSLPCLNLECCNSLMTSLMHCGITK 399
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACN-------------HSGMVRKG---------- 420
IE+F M EG D VT + +L A + H ++ G
Sbjct: 400 DIIEMFGLMIDEGTGIDEVTLSTVLKALSLSLPESLHSCTLVHCCAIKSGYAADVAVSCS 459
Query: 421 --DLYFNS--MEAAYGI-----APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN---D 468
D Y S E + + PNI + +I+ R G ++ + + + +N D
Sbjct: 460 LIDAYTKSGQNEVSRKVFDELDTPNIFCLTSIINGYARNGMGTDCVKMLREMDRMNLIPD 519
Query: 469 PVVLGSLLSACRVHGNMAIGE 489
V + S+LS C G + GE
Sbjct: 520 EVTILSVLSGCSHSGLVEEGE 540
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/331 (20%), Positives = 155/331 (46%), Gaps = 8/331 (2%)
Query: 124 LRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGF 183
L + + + N I +K G A + + V+YN LISG +
Sbjct: 38 LEENPSDLVYTHNRRIDELIKSGNLLSAHEAFDEMSVRDVVTYNLLISGNSRYGCSLRAI 97
Query: 184 EVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMY 243
E++ M+ G +F +L ++ R G+ +HC+ + L C + + ++ +Y
Sbjct: 98 ELYAEMVSCGLRESASTFPSVLSVCSDELFCREGIQVHCRVISLGFGCNMFVRSALVGLY 157
Query: 244 AQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTF 303
A ++ +++F + D+++ N L+ F + + F + M E + + T+
Sbjct: 158 ACLRLVDVALKLFDEMLDRNLAVCNLLLRCFCQTGESKRLFEVYLRMELE-GVAKNGLTY 216
Query: 304 ASILASCTWHASFLHGKQIHAFLFRTRQYWDVG---VHNALVNMYAKCGSIGYAHKVFSK 360
++ C+ GKQ+H+ + ++ W++ V N LV+ Y+ CG + + + F+
Sbjct: 217 CYMIRGCSHDRLVYEGKQLHSLVVKSG--WNISNIFVANVLVDYYSACGDLSGSMRSFNA 274
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+ +++ISWN++++ ++G ++++F +M+ G +P F L C+ + ++ G
Sbjct: 275 VPEKDVISWNSIVSVCADYGSVLDSLDLFSKMQFWGKRPSIRPFMSFLNFCSRNSDIQSG 334
Query: 421 -DLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
++ ++ + ++ ++ S LIDM G+
Sbjct: 335 KQIHCYVLKMGFDVS-SLHVQSALIDMYGKC 364
>AT4G18520.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:10215250-10217103 REVERSE
LENGTH=617
Length = 617
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/410 (30%), Positives = 216/410 (52%), Gaps = 9/410 (2%)
Query: 9 LLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
LL CS+ F L H ++K+G+ ++ V + L+ Y +CG + A + FD M E++
Sbjct: 190 LLNLCSRRAEFELGRQVHGNMVKVGV-GNLIVESSLVYFYAQCGELTSALRAFDMMEEKD 248
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHG 121
+SW+A+IS + G A+ +F M LPNEF S L AC+ +AL G+Q+H
Sbjct: 249 VISWTAVISACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGRQVHS 308
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
L ++ + FV SL+ MY KCG+ SD V+ N+V++ ++I+ E+
Sbjct: 309 LVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEE 368
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
+F++M + + + + V +L ++ G LH Q +K +++ IG+ ++
Sbjct: 369 AISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKELHAQIIKNSIEKNVYIGSTLVW 428
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDF 301
+Y + + V + + +DV+SW +I+ S + ++ F KEM+ E + P+ F
Sbjct: 429 LYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHESEALDFLKEMIQE-GVEPNPF 487
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
T++S L +C S L G+ IH+ + +V V +AL++MYAKCG + A +VF M
Sbjct: 488 TYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSALIHMYAKCGFVSEAFRVFDSM 547
Query: 362 SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
+NL+SW MI + +G A+++ +M+AEG + D F +L C
Sbjct: 548 PEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVDDYIFATILSTC 597
Score = 187 bits (474), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/439 (28%), Positives = 217/439 (49%), Gaps = 7/439 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA LK ++ N L++ V+ G +V ARKVFD M E+NTV+W+AMI GY + G
Sbjct: 104 IHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKYGL 163
Query: 81 HWMALHLFSQMKV----LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
A LF NE +F L+ C+ G+Q+HG ++ G ++ V +
Sbjct: 164 EDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRRAEFELGRQVHGNMVKVGVGNL-IVES 222
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
SL+ Y +CG+ + AL + + +S+ A+IS K +F ML F+P
Sbjct: 223 SLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIGMLNHWFLP 282
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
+ F+ +L + R G +H VK + +G +M MYA+ I + +VF
Sbjct: 283 NEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCGEISDCRKVF 342
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
+ +++ ++W ++I A + + G+ + +M + ++ T SIL +C +
Sbjct: 343 DGMSNRNTVTWTSIIAAHAR-EGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGAL 401
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
L GK++HA + + +V + + LV +Y KCG A V ++ R+++SW MI+
Sbjct: 402 LLGKELHAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGC 461
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
+ G A++ ++M EGV+P+ T++ L AC +S + G + + + ++ N
Sbjct: 462 SSLGHESEALDFLKEMIQEGVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALS-N 520
Query: 437 IGHFSCLIDMLGRAGRLSE 455
+ S LI M + G +SE
Sbjct: 521 VFVGSALIHMYAKCGFVSE 539
Score = 154 bits (390), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 200/407 (49%), Gaps = 22/407 (5%)
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVEN 176
++IH ++L+ + + N+LI+ ++ G A V+ + N+V++ A+I G+++
Sbjct: 102 KRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYARKVFDSMPEKNTVTWTAMIDGYLKY 161
Query: 177 HEPEKGFEVFKLMLQEG--FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
++ F +F+ ++ G F +R FV LL + +F G +H VK+
Sbjct: 162 GLEDEAFALFEDYVKHGIRFTNERM-FVCLLNLCSRRAEFELGRQVHGNMVKVG------ 214
Query: 235 IGNVIMS-----MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKE 289
+GN+I+ YAQ + +R F ++++KDVISW +I+A S K+ F
Sbjct: 215 VGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVISACSRKGHGIKAIGMFIG 274
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
M+N + P++FT SIL +C+ + G+Q+H+ + + DV V +L++MYAKCG
Sbjct: 275 MLNHWFL-PNEFTVCSILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG 333
Query: 350 SIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
I KVF MS RN ++W ++IAA G GE AI +F MK + +++T +L
Sbjct: 334 EISDCRKVFDGMSNRNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILR 393
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHL--N 467
AC G + G ++ I N+ S L+ + + G E + N L
Sbjct: 394 ACGSVGALLLGK-ELHAQIIKNSIEKNVYIGSTLVWLYCKCG---ESRDAFNVLQQLPSR 449
Query: 468 DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYA 514
D V +++S C G+ + K +++ V +P+ S L A
Sbjct: 450 DVVSWTAMISGCSSLGHESEALDFLKEMIQ-EGVEPNPFTYSSALKA 495
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 137/302 (45%), Gaps = 6/302 (1%)
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
F +R + L + + + R +H A+K D GN ++S + +
Sbjct: 78 FDSERVDYALLAEWLQSSNGMRLIKRIHAMALKCFDDQVIYFGNNLISSCVRLGDLVYAR 137
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+VF + +K+ ++W +I+ + + + ++F F++ + ++ F +L C+
Sbjct: 138 KVFDSMPEKNTVTWTAMIDGYLKYGLEDEAFALFEDYVKHGIRFTNERMFVCLLNLCSRR 197
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
A F G+Q+H + + ++ V ++LV YA+CG + A + F M +++ISW +I
Sbjct: 198 AEFELGRQVHGNMVKV-GVGNLIVESSLVYFYAQCGELTSALRAFDMMEEKDVISWTAVI 256
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGI 433
+A G G +AI +F M P+ T +L AC+ +R G +S+ I
Sbjct: 257 SACSRKGHGIKAIGMFIGMLNHWFLPNEFTVCSILKACSEEKALRFGR-QVHSLVVKRMI 315
Query: 434 APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAK 493
++ + L+DM + G +S+ + + + N V S+++A H GE
Sbjct: 316 KTDVFVGTSLMDMYAKCGEISDCRKVFDGMSNRN-TVTWTSIIAA---HAREGFGEEAIS 371
Query: 494 LL 495
L
Sbjct: 372 LF 373
>AT5G56310.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22802322-22803914 FORWARD
LENGTH=530
Length = 530
Score = 223 bits (569), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 143/485 (29%), Positives = 238/485 (49%), Gaps = 48/485 (9%)
Query: 102 STLSACASLRALVQGQQIHGLSLRS-----GYASISFVSNSLITMYMKCGQCSDA----- 151
+ LS + L V +IHG +L++ Y I+ ++ + + CS+A
Sbjct: 6 NALSLSSGLNWFVTSLKIHGNNLKTLKQSHCYMIITGLNRDNLNVAKFIEACSNAGHLRY 65
Query: 152 -LSVYANSVGTNSVSYNALISGFVENHEPEK---GFEVFKLMLQEGFVPDRFSFVGLLGF 207
SV+ + N+ +N +I EP V++ + PD F+F +L
Sbjct: 66 AYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFPFVLKI 125
Query: 208 STNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISW 267
+ + D G +H Q V D + + ++ MY + + ++F + KDV W
Sbjct: 126 AVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVW 185
Query: 268 NTLINAFSHFD--DQGKSFL-------------------------------FFKEMMNEC 294
N L+ + D+ +S L F+ M+ E
Sbjct: 186 NALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLME- 244
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
++ PD+ T ++L++C S G++I +++ V ++NA+++MYAK G+I A
Sbjct: 245 NVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKA 304
Query: 355 HKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
VF ++ RN+++W T+IA HG G A+ +F +M GV+P+ VTF +L AC+H
Sbjct: 305 LDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAILSACSHV 364
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGS 474
G V G FNSM + YGI PNI H+ C+ID+LGRAG+L E +E I + + GS
Sbjct: 365 GWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKANAAIWGS 424
Query: 475 LLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGL 534
LL+A VH ++ +GER L+++ P + Y+LL+NLY++ G W+E R M+KG G+
Sbjct: 425 LLAASNVHHDLELGERALSELIKLEPNNSGNYMLLANLYSNLGRWDESRMMRNMMKGIGV 484
Query: 535 RKEPG 539
+K G
Sbjct: 485 KKMAG 489
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 47/384 (12%)
Query: 48 GRVVLARKVFDGMSERNTVSWSAMI---SGYDQCGEHWMALHLFSQMKVL---PNEFVFA 101
G + A VF NT + MI S D+ H +A+ ++ ++ L P+ F F
Sbjct: 61 GHLRYAYSVFTHQPCPNTYLHNTMIRALSLLDEPNAHSIAITVYRKLWALCAKPDTFTFP 120
Query: 102 STLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN---- 157
L + + G+QIHG + G+ S V LI MY CG DA ++
Sbjct: 121 FVLKIAVRVSDVWFGRQIHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVK 180
Query: 158 -------------SVGT----------------NSVSYNALISGFVENHEPEKGFEVFKL 188
VG N VS+ +ISG+ ++ + EVF+
Sbjct: 181 DVNVWNALLAGYGKVGEMDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQR 240
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
ML E PD + + +L +L G + ++ + N ++ MYA+
Sbjct: 241 MLMENVEPDEVTLLAVLSACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGN 300
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
I + + VF + +++V++W T+I + ++ F M+ + +RP+D TF +IL+
Sbjct: 301 ITKALDVFECVNERNVVTWTTIIAGLATHGHGAEALAMFNRMV-KAGVRPNDVTFIAILS 359
Query: 309 SCTWHASFLH-GKQI-HAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-N 365
+C+ H ++ GK++ ++ + + ++ + ++++ + G + A +V M ++ N
Sbjct: 360 ACS-HVGWVDLGKRLFNSMRSKYGIHPNIEHYGCMIDLLGRAGKLREADEVIKSMPFKAN 418
Query: 366 LISWNTMIAAFGNH---GLGERAI 386
W +++AA H LGERA+
Sbjct: 419 AAIWGSLLAASNVHHDLELGERAL 442
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 36/221 (16%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE------------------ 62
+H V+ G S V V L+ MY CG + ARK+FD M
Sbjct: 138 IHGQVVVFGFDSSVHVVTGLIQMYFSCGGLGDARKMFDEMLVKDVNVWNALLAGYGKVGE 197
Query: 63 ---------------RNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTL 104
RN VSW+ +ISGY + G A+ +F +M V P+E + L
Sbjct: 198 MDEARSLLEMMPCWVRNEVSWTCVISGYAKSGRASEAIEVFQRMLMENVEPDEVTLLAVL 257
Query: 105 SACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSV 164
SACA L +L G++I G ++N++I MY K G + AL V+ N V
Sbjct: 258 SACADLGSLELGERICSYVDHRGMNRAVSLNNAVIDMYAKSGNITKALDVFECVNERNVV 317
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
++ +I+G + + +F M++ G P+ +F+ +L
Sbjct: 318 TWTTIIAGLATHGHGAEALAMFNRMVKAGVRPNDVTFIAIL 358
>AT5G42450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:16977297-16978850 FORWARD
LENGTH=517
Length = 517
Score = 221 bits (564), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 128/421 (30%), Positives = 226/421 (53%), Gaps = 43/421 (10%)
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
+S A+I FV+ + + FK +L G P+ F+F ++G ST D + G LHC
Sbjct: 59 ISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTTSRDVKLGKQLHCY 118
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFI-------------------------------EEV 252
A+K+ L +G+ +++ Y + + + EE
Sbjct: 119 ALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNLISGYLKKHEFEEA 178
Query: 253 VRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
+ +FR + ++ V++WN +I FS ++ F +M+ E + P++ TF + + +
Sbjct: 179 LSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPNESTFPCAITAISN 238
Query: 313 HASFLHGKQIHAFLFR-TRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS--YRNLISW 369
AS GK IHA + + ++V V N+L++ Y+KCG++ + F+K+ RN++SW
Sbjct: 239 IASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSW 298
Query: 370 NTMIAAFGNHGLGERAIEIFEQM-KAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
N+MI + ++G GE A+ +FE+M K ++P++VT G+L ACNH+G++++G +YFN
Sbjct: 299 NSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACNHAGLIQEGYMYFNKAV 358
Query: 429 AAYGIAPNI---GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVV--LGSLLSACRVHG 483
Y PN+ H++C++DML R+GR E EE I DP + +LL C++H
Sbjct: 359 NDYD-DPNLLELEHYACMVDMLSRSGRFKEAEELIKSMPL--DPGIGFWKALLGGCQIHS 415
Query: 484 NMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
N + + A +LE+ P S YV+LSN Y++ W V+ R+ +K +GL++ G +W+
Sbjct: 416 NKRLAKLAASKILELDPRDVSSYVMLSNAYSAMENWQNVSLIRRKMKETGLKRFTGCSWI 475
Query: 544 K 544
+
Sbjct: 476 E 476
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 167/352 (47%), Gaps = 45/352 (12%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACAS 109
A KVFD + E + +S +A+I + + H A F ++ L PNEF F + + + +
Sbjct: 46 AHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLLCLGIRPNEFTFGTVIGSSTT 105
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
R + G+Q+H +L+ G AS FV ++++ Y+K +DA + ++ N VS L
Sbjct: 106 SRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPNVVSITNL 165
Query: 170 ISGFVENHEPEKGFEVFKL-------------------------------MLQEGFV-PD 197
ISG+++ HE E+ +F+ ML+EG V P+
Sbjct: 166 ISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFVDMLREGVVIPN 225
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVK-LALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
+F + +N+ G S+H A+K L + N ++S Y++ +E+ + F
Sbjct: 226 ESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAF 285
Query: 257 RLIQD--KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
+++ ++++SWN++I ++H ++ F++M+ + ++RP++ T +L +C HA
Sbjct: 286 NKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFACN-HA 344
Query: 315 SFLHGKQIHAFLFRTRQYWDVGV-----HNALVNMYAKCGSIGYAHKVFSKM 361
+ ++ F Y D + + +V+M ++ G A ++ M
Sbjct: 345 GLIQEGYMY-FNKAVNDYDDPNLLELEHYACMVDMLSRSGRFKEAEELIKSM 395
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 43/244 (17%)
Query: 5 TIGTLL--QRCSKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD-- 58
T GT++ S+ + G LH LK+GL S+VFV + +LN YVK + AR+ FD
Sbjct: 95 TFGTVIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDT 154
Query: 59 -----------------------------GMSERNTVSWSAMISGYDQCGEHWMALHLFS 89
M ER+ V+W+A+I G+ Q G + A++ F
Sbjct: 155 RDPNVVSITNLISGYLKKHEFEEALSLFRAMPERSVVTWNAVIGGFSQTGRNEEAVNTFV 214
Query: 90 QM----KVLPNEFVFASTLSACASLRALVQGQQIHGLSLR-SGYASISFVSNSLITMYMK 144
M V+PNE F ++A +++ + G+ IH +++ G FV NSLI+ Y K
Sbjct: 215 DMLREGVVIPNESTFPCAITAISNIASHGAGKSIHACAIKFLGKRFNVFVWNSLISFYSK 274
Query: 145 CGQCSDALSVYAN--SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE-GFVPDRFSF 201
CG D+L + N VS+N++I G+ N E+ +F+ M+++ P+ +
Sbjct: 275 CGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAHNGRGEEAVAMFEKMVKDTNLRPNNVTI 334
Query: 202 VGLL 205
+G+L
Sbjct: 335 LGVL 338
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 88/199 (44%), Gaps = 7/199 (3%)
Query: 247 NFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC-SIRPDDFTFAS 305
+ I +VF I + DVIS +I F ++ FK ++ C IRP++FTF +
Sbjct: 41 DLIRNAHKVFDEIPELDVISATAVIGRFVKESRHVEASQAFKRLL--CLGIRPNEFTFGT 98
Query: 306 ILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRN 365
++ S T GKQ+H + + +V V +A++N Y K ++ A + F N
Sbjct: 99 VIGSSTTSRDVKLGKQLHCYALKMGLASNVFVGSAVLNCYVKLSTLTDARRCFDDTRDPN 158
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
++S +I+ + E A+ +F M V VT+ ++ + +G + F
Sbjct: 159 VVSITNLISGYLKKHEFEEALSLFRAMPERSV----VTWNAVIGGFSQTGRNEEAVNTFV 214
Query: 426 SMEAAYGIAPNIGHFSCLI 444
M + PN F C I
Sbjct: 215 DMLREGVVIPNESTFPCAI 233
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 21 LHAAVLK-IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--RNTVSWSAMISGYDQ 77
+HA +K +G + +VFV N L++ Y KCG + + F+ + E RN VSW++MI GY
Sbjct: 248 IHACAIKFLGKRFNVFVWNSLISFYSKCGNMEDSLLAFNKLEEEQRNIVSWNSMIWGYAH 307
Query: 78 CGEHWMALHLFSQM----KVLPNEFVFASTLSAC 107
G A+ +F +M + PN L AC
Sbjct: 308 NGRGEEAVAMFEKMVKDTNLRPNNVTILGVLFAC 341
>AT2G36730.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:15405068-15406573 REVERSE
LENGTH=501
Length = 501
Score = 221 bits (564), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 234/447 (52%), Gaps = 12/447 (2%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM--YMKCGQCSDALSVYANSVGT 161
L C+S++ L+Q IHG S + SF+ + L+ + + A ++ +S +
Sbjct: 20 LKLCSSIKHLLQ---IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDS 76
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
++N L G+ + P + V+ M + G P++ +F LL + G +
Sbjct: 77 TPSTWNMLSRGYSSSDSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQ 136
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
+ +K D +GN ++ +Y + +VF + +++V+SWN+++ A
Sbjct: 137 VEVLKHGFDFDVYVGNNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLN 196
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNAL 341
F F EM+ + PD+ T +L++C + S GK +H+ + + + AL
Sbjct: 197 LVFECFCEMIGK-RFCPDETTMVVLLSACGGNLSL--GKLVHSQVMVRELELNCRLGTAL 253
Query: 342 VNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM-KAEGVKPD 400
V+MYAK G + YA VF +M +N+ +W+ MI +G E A+++F +M K V+P+
Sbjct: 254 VDMYAKSGGLEYARLVFERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPN 313
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYI 460
VTF G+L AC+H+G+V G YF+ ME + I P + H+ ++D+LGRAGRL+E ++I
Sbjct: 314 YVTFLGVLCACSHTGLVDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFI 373
Query: 461 NKFHHLNDPVVLGSLLSACRVH---GNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDG 517
K D VV +LLSAC +H + IGE++ K L+E+ P + V+++N +A
Sbjct: 374 KKMPFEPDAVVWRTLLSACSIHHDEDDEGIGEKVKKRLIELEPKRSGNLVIVANRFAEAR 433
Query: 518 MWNEVTSARKMLKGSGLRKEPGYAWLK 544
MW E R+++K + ++K G + L+
Sbjct: 434 MWAEAAEVRRVMKETKMKKIAGESCLE 460
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 180/377 (47%), Gaps = 15/377 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNM--YVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQC 78
+H + LQ+ F+ ++L+ + + AR + S+ +W+ + GY
Sbjct: 32 IHGQIHLSSLQNDSFIISELVRVSSLSLAKDLAFARTLLLHSSDSTPSTWNMLSRGYSSS 91
Query: 79 GEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
++ ++S+MK + PN+ F L ACAS L G+QI L+ G+ +V
Sbjct: 92 DSPVESIWVYSEMKRRGIKPNKLTFPFLLKACASFLGLTAGRQIQVEVLKHGFDFDVYVG 151
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
N+LI +Y C + SDA V+ N VS+N++++ VEN + FE F M+ + F
Sbjct: 152 NNLIHLYGTCKKTSDARKVFDEMTERNVVSWNSIMTALVENGKLNLVFECFCEMIGKRFC 211
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD + V LL S + G +H Q + L+ +G ++ MYA+ +E V
Sbjct: 212 PDETTMVVLL--SACGGNLSLGKLVHSQVMVRELELNCRLGTALVDMYAKSGGLEYARLV 269
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F + DK+V +W+ +I + + ++ F +MM E S+RP+ TF +L +C+
Sbjct: 270 FERMVDKNVWTWSAMIVGLAQYGFAEEALQLFSKMMKESSVRPNYVTFLGVLCACSHTGL 329
Query: 316 FLHGKQIHAFLFRTRQYWDVGVH-NALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMI 373
G + + + + + +H A+V++ + G + A+ KM + + + W T++
Sbjct: 330 VDDGYKYFHEMEKIHKIKPMMIHYGAMVDILGRAGRLNEAYDFIKKMPFEPDAVVWRTLL 389
Query: 374 AAFGNH------GLGER 384
+A H G+GE+
Sbjct: 390 SACSIHHDEDDEGIGEK 406
>AT3G04750.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:1301391-1303376 REVERSE
LENGTH=661
Length = 661
Score = 220 bits (561), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 147/512 (28%), Positives = 248/512 (48%), Gaps = 48/512 (9%)
Query: 69 SAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
SA+ S ++C L+S M +V P+ F + A + L + +QIH +
Sbjct: 108 SAVSSSKNEC------FGLYSSMIRHRVSPDRQTFLYLMKASSFLSEV---KQIHCHIIV 158
Query: 126 SGYASI-SFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
SG S+ +++ NSL+ YM+ G A V+A + S+N +I G+ + + +
Sbjct: 159 SGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALK 218
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH--CQAVKLALDCTPLIGNVIMSM 242
++ M+ +G PD ++ + LL +L D R G +H + ++ N ++ M
Sbjct: 219 LYFKMVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDM 278
Query: 243 YAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH----------FDDQGK-------SFL 285
Y + R F ++ KD+ SWNT++ F FD K S L
Sbjct: 279 YFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLL 338
Query: 286 F---------------FKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
F F EM ++PD T S+++ + HG+ +H + R +
Sbjct: 339 FGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQ 398
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
D + +AL++MY KCG I A VF + +++ W +MI HG G++A+++F
Sbjct: 399 LKGDAFLSSALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLAFHGNGQQALQLFG 458
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
+M+ EGV P++VT +L AC+HSG+V +G FN M+ +G P H+ L+D+L RA
Sbjct: 459 RMQEEGVTPNNVTLLAVLTACSHSGLVEEGLHVFNHMKDKFGFDPETEHYGSLVDLLCRA 518
Query: 451 GRLSEVEEYINKFHHLNDPVVL-GSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLL 509
GR+ E ++ + K + + GS+LSACR ++ E LL++ P YVLL
Sbjct: 519 GRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEKEGGYVLL 578
Query: 510 SNLYASDGMWNEVTSARKMLKGSGLRKEPGYA 541
SN+YA+ G W R+ ++ G++K GY+
Sbjct: 579 SNIYATVGRWGYSDKTREAMENRGVKKTAGYS 610
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 172/413 (41%), Gaps = 57/413 (13%)
Query: 35 FVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM--- 91
++ N L+ Y++ G +A KVF M + S++ MI GY + G AL L+ +M
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226
Query: 92 KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSG--YASISFVSNSLITMYMKCGQCS 149
+ P+E+ S L C L + G+ +HG R G Y+S +SN+L+ MY KC +
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSNLILSNALLDMYFKCKESG 286
Query: 150 DALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV-------------- 195
A + + S+N ++ GFV + E VF M + V
Sbjct: 287 LAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGC 346
Query: 196 -------------------PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
PDR + V L+ + N + G +H ++L L +
Sbjct: 347 DQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGELSHGRWVHGLVIRLQLKGDAFLS 406
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
+ ++ MY + IE VF+ +KDV W ++I + F G+ L M E +
Sbjct: 407 SALIDMYCKCGIIERAFMVFKTATEKDVALWTSMITGLA-FHGNGQQALQLFGRMQEEGV 465
Query: 297 RPDDFTFASILASCTWHAS--------FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
P++ T ++L +C+ H+ F H K F T Y +LV++ +
Sbjct: 466 TPNNVTLLAVLTACS-HSGLVEEGLHVFNHMKDKFGFDPETEHY------GSLVDLLCRA 518
Query: 349 GSIGYAHKVF-SKMSYRNLIS-WNTMIAAF-GNHGLGERAIEIFEQMKAEGVK 398
G + A + KM R S W ++++A G + + + E +K E K
Sbjct: 519 GRVEEAKDIVQKKMPMRPSQSMWGSILSACRGGEDIETAELALTELLKLEPEK 571
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/410 (21%), Positives = 158/410 (38%), Gaps = 92/410 (22%)
Query: 20 GLHAAVLKIG--LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQ 77
G+H + + G S++ +SN LL+MY KC LA++ FD M +++ SW+ M+ G+ +
Sbjct: 253 GVHGWIERRGPVYSSNLILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVR 312
Query: 78 CGEHWMALHLFSQM------------------------------------KVLPNEFVFA 101
G+ A +F QM KV P+
Sbjct: 313 LGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMV 372
Query: 102 STLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT 161
S +S A+ L G+ +HGL +R +F+S++LI MY KCG A V+ +
Sbjct: 373 SLISGAANNGELSHGRWVHGLVIRLQLKGDAFLSSALIDMYCKCGIIERAFMVFKTATEK 432
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
+ + ++I+G + ++ ++F M +EG P+ + + +L ++ G+
Sbjct: 433 DVALWTSMITGLAFHGNGQQALQLFGRMQEEGVTPNNVTLLAVLTACSHSGLVEEGL--- 489
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEE----------VVRVFRLIQDKDVISWNTLI 271
+V M +F F E + R R+ + KD++
Sbjct: 490 ---------------HVFNHMKDKFGFDPETEHYGSLVDLLCRAGRVEEAKDIVQ----- 529
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
K+M +RP + SIL++C + L +
Sbjct: 530 ----------------KKM----PMRPSQSMWGSILSACRGGEDIETAELALTELLKLEP 569
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGL 381
+ G + L N+YA G GY+ K M R + + G GL
Sbjct: 570 EKE-GGYVLLSNIYATVGRWGYSDKTREAMENRGVKKTAGYSSVVGVEGL 618
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 133/301 (44%), Gaps = 22/301 (7%)
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
N YN +IS + + F ++ M++ PDR +F+ L+ S+ L + + +H
Sbjct: 99 NVFVYNTMISAV--SSSKNECFGLYSSMIRHRVSPDRQTFLYLMKASSFLSEVK---QIH 153
Query: 222 CQA-VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQ 280
C V L + N ++ Y + +VF + DV S+N +I ++ Q
Sbjct: 154 CHIIVSGCLSLGNYLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAK---Q 210
Query: 281 GKSF----LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW--D 334
G S L+FK M I PD++T S+L C + GK +H ++ R + +
Sbjct: 211 GFSLEALKLYFK--MVSDGIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERRGPVYSSN 268
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA 394
+ + NAL++MY KC G A + F M +++ SWNTM+ F G E A +F+QM
Sbjct: 269 LILSNALLDMYFKCKESGLAKRAFDAMKKKDMRSWNTMVVGFVRLGDMEAAQAVFDQMP- 327
Query: 395 EGVKPDSVTFTGLLIACNHSGM-VRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
K D V++ LL + G R F M + P+ LI G L
Sbjct: 328 ---KRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEKVKPDRVTMVSLISGAANNGEL 384
Query: 454 S 454
S
Sbjct: 385 S 385
>AT3G47530.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:17517382-17519157 REVERSE
LENGTH=591
Length = 591
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 127/430 (29%), Positives = 215/430 (50%), Gaps = 7/430 (1%)
Query: 117 QQIHGLSLRSGYASISFVSN---SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGF 173
+QIH L LR+ S V + S + + + + + V++ + N +I F
Sbjct: 28 RQIHALLLRTSLIRNSDVFHHFLSRLALSLIPRDINYSCRVFSQRLNPTLSHCNTMIRAF 87
Query: 174 VENHEPEKGFEVFKLMLQEGFVP-DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCT 232
+ P +GF +F+ + + +P + S L D G+ +H +
Sbjct: 88 SLSQTPCEGFRLFRSLRRNSSLPANPLSSSFALKCCIKSGDLLGGLQIHGKIFSDGFLSD 147
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
L+ +M +Y+ + +VF I +D +SWN L + + + F +M N
Sbjct: 148 SLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKRTRDVLVLFDKMKN 207
Query: 293 ECS--IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
+ ++PD T L +C + GKQ+H F+ + + N LV+MY++CGS
Sbjct: 208 DVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNLSNTLVSMYSRCGS 267
Query: 351 IGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
+ A++VF M RN++SW +I+ +G G+ AIE F +M G+ P+ T TGLL A
Sbjct: 268 MDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGISPEEQTLTGLLSA 327
Query: 411 CNHSGMVRKGDLYFNSMEAA-YGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDP 469
C+HSG+V +G ++F+ M + + I PN+ H+ C++D+LGRA L + I D
Sbjct: 328 CSHSGLVAEGMMFFDRMRSGEFKIKPNLHHYGCVVDLLGRARLLDKAYSLIKSMEMKPDS 387
Query: 470 VVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKML 529
+ +LL ACRVHG++ +GER+ L+E+ YVLL N Y++ G W +VT R ++
Sbjct: 388 TIWRTLLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLM 447
Query: 530 KGSGLRKEPG 539
K + +PG
Sbjct: 448 KEKRIHTKPG 457
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 6/191 (3%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H + G S + L+++Y C A KVFD + +R+TVSW+ + S Y +
Sbjct: 135 IHGKIFSDGFLSDSLLMTTLMDLYSTCENSTDACKVFDEIPKRDTVSWNVLFSCYLRNKR 194
Query: 81 HWMALHLFSQMK------VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFV 134
L LF +MK V P+ L ACA+L AL G+Q+H +G + +
Sbjct: 195 TRDVLVLFDKMKNDVDGCVKPDGVTCLLALQACANLGALDFGKQVHDFIDENGLSGALNL 254
Query: 135 SNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
SN+L++MY +CG A V+ N VS+ ALISG N ++ E F ML+ G
Sbjct: 255 SNTLVSMYSRCGSMDKAYQVFYGMRERNVVSWTALISGLAMNGFGKEAIEAFNEMLKFGI 314
Query: 195 VPDRFSFVGLL 205
P+ + GLL
Sbjct: 315 SPEEQTLTGLL 325
>AT5G47460.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:19252463-19254193 REVERSE
LENGTH=576
Length = 576
Score = 218 bits (556), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 158/531 (29%), Positives = 255/531 (48%), Gaps = 48/531 (9%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH V K G S+ +SN L+ Y + A KVFD M + + +SW++++SGY Q G
Sbjct: 77 LHGYVTKHGFVSNTRLSNSLMRFYKTSDSLEDAHKVFDEMPDPDVISWNSLVSGYVQSGR 136
Query: 81 HWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS-FVSN 136
+ LF ++ V PNEF F + L+ACA L G IH ++ G + V N
Sbjct: 137 FQEGICLFLELHRSDVFPNEFSFTAALAACARLHLSPLGACIHSKLVKLGLEKGNVVVGN 196
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
LI MY KCG DA+ V+ + ++VS+NA+++ N + E G F M P
Sbjct: 197 CLIDMYGKCGFMDDAVLVFQHMEEKDTVSWNAIVASCSRNGKLELGLWFFHQMPN----P 252
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D ++ L+ DF +V
Sbjct: 253 DTVTYNELIDAFVKSGDFNNAF-----------------------------------QVL 277
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
+ + + SWNT++ + + + G++ FF + M+ +R D+++ + +LA+ A
Sbjct: 278 SDMPNPNSSSWNTILTGYVNSEKSGEATEFFTK-MHSSGVRFDEYSLSIVLAAVAALAVV 336
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAF 376
G IHA + V V +AL++MY+KCG + +A +F M +NLI WN MI+ +
Sbjct: 337 PWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELMFWTMPRKNLIVWNEMISGY 396
Query: 377 GNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVRKGDL-YFNSMEAAYGIA 434
+G AI++F Q+K E +KPD TF LL C+H + + L YF M Y I
Sbjct: 397 ARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEVPMEVMLGYFEMMINEYRIK 456
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKL 494
P++ H LI +G+ G + + ++ I +F D V +LL AC ++ + +A
Sbjct: 457 PSVEHCCSLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRALLGACSARKDLKAAKTVAAK 516
Query: 495 LLEVPPVTTSP--YVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
++E+ Y+++SNLYA W EV RK+++ SG+ KE G +W+
Sbjct: 517 MIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRESGVLKEVGSSWI 567
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 131/279 (46%), Gaps = 15/279 (5%)
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
++ +G PD V LL S N LH K + N +M Y +
Sbjct: 46 LINDGEKPDASPLVHLLRVSGNYGYVSLCRQLHGYVTKHGFVSNTRLSNSLMRFYKTSDS 105
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+E+ +VF + D DVISWN+L++ + + F E ++ + P++F+F + LA
Sbjct: 106 LEDAHKVFDEMPDPDVISWNSLVSGYVQSGRFQEGICLFLE-LHRSDVFPNEFSFTAALA 164
Query: 309 SCT-WHASFLHGKQIHAFLFRT-RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL 366
+C H S L G IH+ L + + +V V N L++MY KCG + A VF M ++
Sbjct: 165 ACARLHLSPL-GACIHSKLVKLGLEKGNVVVGNCLIDMYGKCGFMDDAVLVFQHMEEKDT 223
Query: 367 ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNS 426
+SWN ++A+ +G E + F QM PD+VT+ L+ A V+ GD + N+
Sbjct: 224 VSWNAIVASCSRNGKLELGLWFFHQMP----NPDTVTYNELIDA-----FVKSGD-FNNA 273
Query: 427 MEAAYGIA-PNIGHFSCLIDMLGRAGRLSEVEEYINKFH 464
+ + PN ++ ++ + + E E+ K H
Sbjct: 274 FQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMH 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 146/321 (45%), Gaps = 11/321 (3%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VL 94
N+L++ +VK G A +V M N+ SW+ +++GY + A F++M V
Sbjct: 258 NELIDAFVKSGDFNNAFQVLSDMPNPNSSSWNTILTGYVNSEKSGEATEFFTKMHSSGVR 317
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
+E+ + L+A A+L + G IH + + G S V+++LI MY KCG A +
Sbjct: 318 FDEYSLSIVLAAVAALAVVPWGSLIHACAHKLGLDSRVVVASALIDMYSKCGMLKHAELM 377
Query: 155 YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDD 213
+ N + +N +ISG+ N + + ++F + QE F+ PDRF+F+ LL ++ +
Sbjct: 378 FWTMPRKNLIVWNEMISGYARNGDSIEAIKLFNQLKQERFLKPDRFTFLNLLAVCSHCEV 437
Query: 214 FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD----KDVISWNT 269
M + + + P + + S+ EV + ++IQ+ D ++W
Sbjct: 438 PMEVMLGYFEMMINEYRIKPSVEHCC-SLIRAMGQRGEVWQAKQVIQEFGFGYDGVAWRA 496
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
L+ A S D + +M+ D++ + + +H + QI + +
Sbjct: 497 LLGACSARKDLKAAKTVAAKMIELGDADKDEYLYIVMSNLYAYHERWREVGQIRKIMRES 556
Query: 330 RQYWDVGVHNALVNMYAKCGS 350
+VG ++ ++ KC S
Sbjct: 557 GVLKEVG--SSWIDSRTKCSS 575
>AT3G62890.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:23246168-23247973 FORWARD
LENGTH=573
Length = 573
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 132/440 (30%), Positives = 221/440 (50%), Gaps = 46/440 (10%)
Query: 151 ALSVYANSV------GTNSVSYNALISGFVEN-HEPEK--GFEVFKLMLQEGFVPDRFSF 201
A+ YAN + S +N +I V N P++ V+ M PD +F
Sbjct: 6 AIIAYANPIFHIRHLKLESFLWNIIIRAIVHNVSSPQRHSPISVYLRMRNHRVSPDFHTF 65
Query: 202 VGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD 261
LL N G H Q + LD P + +++MY+ + RVF
Sbjct: 66 PFLLPSFHNPLHLPLGQRTHAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGS 125
Query: 262 KDVISWNTLINAFSH---FDDQGKSFL----------------------------FFKEM 290
KD+ +WN+++NA++ DD K F F+EM
Sbjct: 126 KDLPAWNSVVNAYAKAGLIDDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREM 185
Query: 291 M----NECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYA 346
NE +RP++FT +++L++C + GK +HA++ + D+ + AL++MYA
Sbjct: 186 QLPKPNEAFVRPNEFTMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYA 245
Query: 347 KCGSIGYAHKVFSKM-SYRNLISWNTMIAAFGNHGLGERAIEIFEQMK-AEGVKPDSVTF 404
KCGS+ A +VF+ + S +++ +++ MI +GL + ++F +M ++ + P+SVTF
Sbjct: 246 KCGSLERAKRVFNALGSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTF 305
Query: 405 TGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH 464
G+L AC H G++ +G YF M +GI P+I H+ C++D+ GR+G + E E +I
Sbjct: 306 VGILGACVHRGLINEGKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMP 365
Query: 465 HLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTS 524
D ++ GSLLS R+ G++ E K L+E+ P+ + YVLLSN+YA G W EV
Sbjct: 366 MEPDVLIWGSLLSGSRMLGDIKTCEGALKRLIELDPMNSGAYVLLSNVYAKTGRWMEVKC 425
Query: 525 ARKMLKGSGLRKEPGYAWLK 544
R ++ G+ K PG ++++
Sbjct: 426 IRHEMEVKGINKVPGCSYVE 445
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 139/304 (45%), Gaps = 49/304 (16%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGR-------------------------------V 50
HA +L GL FV LLNMY CG +
Sbjct: 85 HAQILLFGLDKDPFVRTSLLNMYSSCGDLRSAQRVFDDSGSKDLPAWNSVVNAYAKAGLI 144
Query: 51 VLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK--------VLPNEFVFAS 102
ARK+FD M ERN +SWS +I+GY CG++ AL LF +M+ V PNEF ++
Sbjct: 145 DDARKLFDEMPERNVISWSCLINGYVMCGKYKEALDLFREMQLPKPNEAFVRPNEFTMST 204
Query: 103 TLSACASLRALVQGQQIHGLSLRSGYASISFV-SNSLITMYMKCGQCSDALSVYANSVGT 161
LSAC L AL QG+ +H + + I V +LI MY KCG A V+ N++G+
Sbjct: 205 VLSACGRLGALEQGKWVHAY-IDKYHVEIDIVLGTALIDMYAKCGSLERAKRVF-NALGS 262
Query: 162 --NSVSYNALISGFVENHEPEKGFEVF-KLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM 218
+ +Y+A+I ++ F++F ++ + P+ +FVG+LG + G
Sbjct: 263 KKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINEGK 322
Query: 219 SLHCQAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVR-VFRLIQDKDVISWNTLINAFS 275
S ++ TP I + ++ +Y + I+E + + + DV+ W +L++
Sbjct: 323 SYFKMMIE-EFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSGSR 381
Query: 276 HFDD 279
D
Sbjct: 382 MLGD 385
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ T+L C + +HA + K ++ + + L++MY KCG + A++VF+ +
Sbjct: 201 TMSTVLSACGRLGALEQGKWVHAYIDKYHVEIDIVLGTALIDMYAKCGSLERAKRVFNAL 260
Query: 61 -SERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACASLRALVQ 115
S+++ ++SAMI G LFS+M + PN F L AC + +
Sbjct: 261 GSKKDVKAYSAMICCLAMYGLTDECFQLFSEMTTSDNINPNSVTFVGILGACVHRGLINE 320
Query: 116 GQQIHGLSLRSGYASISFVS-NSLITMYMKCGQCSDALSVYAN-SVGTNSVSYNALISG 172
G+ + + + S ++ +Y + G +A S A+ + + + + +L+SG
Sbjct: 321 GKSYFKMMIEEFGITPSIQHYGCMVDLYGRSGLIKEAESFIASMPMEPDVLIWGSLLSG 379
>AT5G08305.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:2670134-2671738 REVERSE
LENGTH=534
Length = 534
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 214/411 (52%), Gaps = 34/411 (8%)
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+N +I GF + PEK V+ ML+ G +PD ++ L+ S+ L + + G SLHC V
Sbjct: 76 WNFVIRGFSNSRNPEKSISVYIQMLRFGLLPDHMTYPFLMKSSSRLSNRKLGGSLHCSVV 135
Query: 226 KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSH--------- 276
K L+ I N ++ MY F ++F + K++++WN++++A++
Sbjct: 136 KSGLEWDLFICNTLIHMYGSFRDQASARKLFDEMPHKNLVTWNSILDAYAKSGDVVSARL 195
Query: 277 -FDDQG---------------------KSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
FD+ K+ F +MM S + ++ T S++ +C
Sbjct: 196 VFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSSKANEVTMVSVICACAHLG 255
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR--NLISWNTM 372
+ GK +H ++ V + +L++MYAKCGSIG A VF + S + + + WN +
Sbjct: 256 ALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWSVFYRASVKETDALMWNAI 315
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG 432
I +HG ++++F +M+ + PD +TF LL AC+H G+V++ +F S++ + G
Sbjct: 316 IGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLAACSHGGLVKEAWHFFKSLKES-G 374
Query: 433 IAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLA 492
P H++C++D+L RAG + + ++I++ +LG+LL+ C HGN+ + E +
Sbjct: 375 AEPKSEHYACMVDVLSRAGLVKDAHDFISEMPIKPTGSMLGALLNGCINHGNLELAETVG 434
Query: 493 KLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
K L+E+ P YV L+N+YA + + S R+ ++ G++K G++ L
Sbjct: 435 KKLIELQPHNDGRYVGLANVYAINKQFRAARSMREAMEKKGVKKIAGHSIL 485
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVL--- 94
N +L+ Y K G VV AR VFD MSER+ V+WS+MI GY + GE+ AL +F QM +
Sbjct: 178 NSILDAYAKSGDVVSARLVFDEMSERDVVTWSSMIDGYVKRGEYNKALEIFDQMMRMGSS 237
Query: 95 -PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS 153
NE S + ACA L AL +G+ +H L + SLI MY KCG DA S
Sbjct: 238 KANEVTMVSVICACAHLGALNRGKTVHRYILDVHLPLTVILQTSLIDMYAKCGSIGDAWS 297
Query: 154 VY--ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLG 206
V+ A+ T+++ +NA+I G + + ++F M + PD +F+ LL
Sbjct: 298 VFYRASVKETDALMWNAIIGGLASHGFIRESLQLFHKMRESKIDPDEITFLCLLA 352
>AT3G28660.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10739400-10740914 REVERSE
LENGTH=504
Length = 504
Score = 215 bits (547), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 140/463 (30%), Positives = 228/463 (49%), Gaps = 23/463 (4%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD----ALSVY 155
+ S + A + Q + H L + G ++ + L+T ++ + A S++
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 156 ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML---QEGFVPDRFSFVGLLGFSTNLD 212
+ NS Y+ +I + +P G F LM+ +E P +F L+
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDITPSYLTFHFLIVACLKAC 130
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNV---IMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
F G +HC VK + + G+V ++ +Y + + + +VF I DV+ W+
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSD--GHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKWDV 188
Query: 270 LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT 329
L+N + + FKEM+ I PD+F+ + L +C + GK IH F+ +
Sbjct: 189 LMNGYVRCGLGSEGLEVFKEMLVR-GIEPDEFSVTTALTACAQVGALAQGKWIHEFVKKK 247
Query: 330 RQYW---DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAI 386
R W DV V ALV+MYAKCG I A +VF K++ RN+ SW +I + +G ++A
Sbjct: 248 R--WIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKAT 305
Query: 387 EIFEQMKAE-GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLID 445
++++ E G+KPDSV G+L AC H G + +G +MEA YGI P H+SC++D
Sbjct: 306 TCLDRIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVD 365
Query: 446 MLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPP----V 501
++ RAGRL + + I K V G+LL+ CR H N+ +GE + LL++
Sbjct: 366 LMCRAGRLDDALDLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVQNLLDLEKGNVEE 425
Query: 502 TTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ V LSN+Y S E R M++ G+RK PG++ L+
Sbjct: 426 EEAALVQLSNIYFSVQRNPEAFKVRGMIEQRGIRKTPGWSLLE 468
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 6/203 (2%)
Query: 10 LQRCSKTMTFGLHAAVLKIGL-QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSW 68
L+ C ++ +H V+K G+ S V +L +YV+ + ARKVFD + + + V W
Sbjct: 127 LKACFFSVGKQIHCWVVKNGVFLSDGHVQTGVLRIYVEDKLLFDARKVFDEIPQPDVVKW 186
Query: 69 SAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLR 125
+++GY +CG L +F +M V P+EF + L+ACA + AL QG+ IH +
Sbjct: 187 DVLMNGYVRCGLGSEGLEVFKEMLVRGIEPDEFSVTTALTACAQVGALAQGKWIHEFVKK 246
Query: 126 SGY-ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
+ S FV +L+ MY KCG A+ V+ N S+ ALI G+ +K
Sbjct: 247 KRWIESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATT 306
Query: 185 VF-KLMLQEGFVPDRFSFVGLLG 206
++ ++G PD +G+L
Sbjct: 307 CLDRIEREDGIKPDSVVLLGVLA 329
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS 89
++S VFV L++MY KCG + A +VF+ ++ RN SW+A+I GY G A
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFEKLTRRNVFSWAALIGGYAAYGYAKKATTCLD 309
Query: 90 QMK----VLPNEFVFASTLSACASLRALVQGQQ-IHGLSLRSGYASISFVSNSLITMYMK 144
+++ + P+ V L+ACA L +G+ + + R G + ++ + +
Sbjct: 310 RIEREDGIKPDSVVLLGVLAACAHGGFLEEGRTMLENMEARYGITPKHEHYSCIVDLMCR 369
Query: 145 CGQCSDALSV 154
G+ DAL +
Sbjct: 370 AGRLDDALDL 379
>AT5G40410.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16171385-16173211 FORWARD
LENGTH=608
Length = 608
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/447 (28%), Positives = 227/447 (50%), Gaps = 10/447 (2%)
Query: 102 STLSACASLR--ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV 159
+ + +C S+ L+ + + +S R G F+ + L+ Y++ G A ++
Sbjct: 39 AAVKSCVSIELCRLLHCKVVKSVSYRHG-----FIGDQLVGCYLRLGHDVCAEKLFDEMP 93
Query: 160 GTNSVSYNALISGFVENHEPEKGFEVF-KLMLQE-GFVPDRFSFVGLLGFSTNLDDFRTG 217
+ VS+N+LISG+ K FEV ++M+ E GF P+ +F+ ++ G
Sbjct: 94 ERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEG 153
Query: 218 MSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF 277
+H +K + + N ++ Y + + ++F + K+++SWNT+I
Sbjct: 154 RCIHGLVMKFGVLEEVKVVNAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQN 213
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
K +F M PD TF ++L SC + IH + + +
Sbjct: 214 GLAEKGLAYFN-MSRRVGHEPDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCI 272
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
AL+++Y+K G + + VF +++ + ++W M+AA+ HG G AI+ FE M G+
Sbjct: 273 TTALLDLYSKLGRLEDSSTVFHEITSPDSMAWTAMLAAYATHGFGRDAIKHFELMVHYGI 332
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVE 457
PD VTFT LL AC+HSG+V +G YF +M Y I P + H+SC++D+LGR+G L +
Sbjct: 333 SPDHVTFTHLLNACSHSGLVEEGKHYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAY 392
Query: 458 EYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDG 517
I + V G+LL ACRV+ + +G + A+ L E+ P YV+LSN+Y++ G
Sbjct: 393 GLIKEMPMEPSSGVWGALLGACRVYKDTQLGTKAAERLFELEPRDGRNYVMLSNIYSASG 452
Query: 518 MWNEVTSARKMLKGSGLRKEPGYAWLK 544
+W + + R ++K GL + G ++++
Sbjct: 453 LWKDASRIRNLMKQKGLVRASGCSYIE 479
Score = 136 bits (342), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/389 (26%), Positives = 182/389 (46%), Gaps = 16/389 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH V+K H F+ +QL+ Y++ G V A K+FD M ER+ VSW+++ISGY G
Sbjct: 53 LHCKVVKSVSYRHGFIGDQLVGCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGY 112
Query: 81 HWMALHLFSQMKV-----LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
+ S+M + PNE F S +SAC + +G+ IHGL ++ G V
Sbjct: 113 LGKCFEVLSRMMISEVGFRPNEVTFLSMISACVYGGSKEEGRCIHGLVMKFGVLEEVKVV 172
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
N+ I Y K G + + ++ + N VS+N +I ++N EKG F + + G
Sbjct: 173 NAFINWYGKTGDLTSSCKLFEDLSIKNLVSWNTMIVIHLQNGLAEKGLAYFNMSRRVGHE 232
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
PD+ +F+ +L ++ R +H + I ++ +Y++ +E+ V
Sbjct: 233 PDQATFLAVLRSCEDMGVVRLAQGIHGLIMFGGFSGNKCITTALLDLYSKLGRLEDSSTV 292
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
F I D ++W ++ A++ G+ + E+M I PD TF +L +C+
Sbjct: 293 FHEITSPDSMAWTAMLAAYA-THGFGRDAIKHFELMVHYGISPDHVTFTHLLNACSHSGL 351
Query: 316 FLHGKQIHAFLFRTRQYW---DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS-WNT 371
GK H F +++Y + ++ +V++ + G + A+ + +M W
Sbjct: 352 VEEGK--HYFETMSKRYRIDPRLDHYSCMVDLLGRSGLLQDAYGLIKEMPMEPSSGVWGA 409
Query: 372 MIAA---FGNHGLGERAIE-IFEQMKAEG 396
++ A + + LG +A E +FE +G
Sbjct: 410 LLGACRVYKDTQLGTKAAERLFELEPRDG 438
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 84/174 (48%), Gaps = 4/174 (2%)
Query: 284 FLFFKEMMNECS-IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALV 342
FL+ + +++ S + D +S++A+ S + +H + ++ Y + + LV
Sbjct: 14 FLYRRRFLSQSSFVHSLDANVSSLIAAVKSCVSIELCRLLHCKVVKSVSYRHGFIGDQLV 73
Query: 343 NMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE--GVKPD 400
Y + G A K+F +M R+L+SWN++I+ + G + E+ +M G +P+
Sbjct: 74 GCYLRLGHDVCAEKLFDEMPERDLVSWNSLISGYSGRGYLGKCFEVLSRMMISEVGFRPN 133
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
VTF ++ AC + G +G + + +G+ + + I+ G+ G L+
Sbjct: 134 EVTFLSMISACVYGGSKEEGRC-IHGLVMKFGVLEEVKVVNAFINWYGKTGDLT 186
>AT1G04840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:1362867-1364962 REVERSE
LENGTH=665
Length = 665
Score = 214 bits (545), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 149/549 (27%), Positives = 257/549 (46%), Gaps = 57/549 (10%)
Query: 8 TLLQRCSKTMTFG-LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARK----VFDGMSE 62
+L+ C T + +HA +L+ G+ +S+++ V C ++ + +F E
Sbjct: 34 SLIHACKDTASLRHVHAQILRRGV-----LSSRVAAQLVSCSSLLKSPDYSLSIFRNSEE 88
Query: 63 RNTVSWSAMISGYDQCGEHWMALH---LFSQMKVLPNEFVFASTLSACASLRALVQGQQI 119
RN +A+I G + ++ L ++ V P+ F L + + L G+ +
Sbjct: 89 RNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFRWLGRAL 148
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANS---VGTNSV-SYNALISGFVE 175
H +L++ SFV SL+ MY K GQ A V+ S + S+ +N LI+G+
Sbjct: 149 HAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVLINGYCR 208
Query: 176 NHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
+ +F+ M P+R S +ST
Sbjct: 209 AKDMHMATTLFRSM------PERNSG----SWST-------------------------- 232
Query: 236 GNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
++ Y + ++F L+ +K+V+SW TLIN FS D + + EM+ E
Sbjct: 233 ---LIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYFEML-EKG 288
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
++P+++T A++L++C+ + G +IH ++ D + ALV+MYAKCG + A
Sbjct: 289 LKPNEYTIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAA 348
Query: 356 KVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
VFS M++++++SW MI + HG +AI+ F QM G KPD V F +L AC +S
Sbjct: 349 TVFSNMNHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTACLNSS 408
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
V G +F+SM Y I P + H+ ++D+LGRAG+L+E E + D +L
Sbjct: 409 EVDLGLNFFDSMRLDYAIEPTLKHYVLVVDLLGRAGKLNEAHELVENMPINPDLTTWAAL 468
Query: 476 LSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLR 535
AC+ H E +++ LLE+ P Y+ L +AS G +V R L+
Sbjct: 469 YRACKAHKGYRRAESVSQNLLELDPELCGSYIFLDKTHASKGNIQDVEKRRLSLQKRIKE 528
Query: 536 KEPGYAWLK 544
+ G+++++
Sbjct: 529 RSLGWSYIE 537
Score = 122 bits (305), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 102/393 (25%), Positives = 165/393 (41%), Gaps = 50/393 (12%)
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
P+E F S + AC +L + +H LR G S S V+ L++ +LS+
Sbjct: 27 PDESHFISLIHACKDTASL---RHVHAQILRRGVLS-SRVAAQLVSCSSLLKSPDYSLSI 82
Query: 155 YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF 214
+ NS N NALI G EN E F LML+ G PDR +F +L ++ L
Sbjct: 83 FRNSEERNPFVLNALIRGLTENARFESSVRHFILMLRLGVKPDRLTFPFVLKSNSKLGFR 142
Query: 215 RTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR----LIQDKDVISWNTL 270
G +LH +K +DC + ++ MYA+ ++ +VF I+ + ++ WN L
Sbjct: 143 WLGRALHAATLKNFVDCDSFVRLSLVDMYAKTGQLKHAFQVFEESPDRIKKESILIWNVL 202
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
IN + R D A+ LFR+
Sbjct: 203 INGY---------------------CRAKDMHMATT-------------------LFRSM 222
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
+ G + L+ Y G + A ++F M +N++SW T+I F G E AI +
Sbjct: 223 PERNSGSWSTLIKGYVDSGELNRAKQLFELMPEKNVVSWTTLINGFSQTGDYETAISTYF 282
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
+M +G+KP+ T +L AC+ SG + G + + GI + + L+DM +
Sbjct: 283 EMLEKGLKPNEYTIAAVLSACSKSGALGSG-IRIHGYILDNGIKLDRAIGTALVDMYAKC 341
Query: 451 GRLSEVEEYINKFHHLNDPVVLGSLLSACRVHG 483
G L + +H D + +++ VHG
Sbjct: 342 GELDCAATVFSNMNH-KDILSWTAMIQGWAVHG 373
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 5 TIGTLLQRCSKTMTFG----LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI +L CSK+ G +H +L G++ + L++MY KCG + A VF M
Sbjct: 295 TIAAVLSACSKSGALGSGIRIHGYILDNGIKLDRAIGTALVDMYAKCGELDCAATVFSNM 354
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSAC 107
+ ++ +SW+AMI G+ G A+ F QM P+E VF + L+AC
Sbjct: 355 NHKDILSWTAMIQGWAVHGRFHQAIQCFRQMMYSGEKPDEVVFLAVLTAC 404
>AT4G14170.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:8176709-8178142 REVERSE
LENGTH=477
Length = 477
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 125/411 (30%), Positives = 218/411 (53%), Gaps = 10/411 (2%)
Query: 134 VSNSLITMYMKCGQC-SDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE 192
+S+ L+ Y K +LSV+ + N S+N +I F + K ++F M +E
Sbjct: 68 LSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLFLRMWRE 127
Query: 193 GFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEE 251
V PD F+ +L + + ++G +H +KL + + + ++ MY +
Sbjct: 128 SCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVDMGKLLH 187
Query: 252 VVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFL---FFKEMMNECSIRPDDFTFASILA 308
++F + +D + + + F + QG++ L F+EM D S+L
Sbjct: 188 ARKLFDDMPVRDSVLYTAM---FGGYVQQGEAMLGLAMFREM-GYSGFALDSVVMVSLLM 243
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS 368
+C + HGK +H + R + + NA+ +MY KC + YAH VF MS R++IS
Sbjct: 244 ACGQLGALKHGKSVHGWCIRRCSCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRDVIS 303
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
W+++I +G G + ++F++M EG++P++VTF G+L AC H G+V K LYF M+
Sbjct: 304 WSSLILGYGLDGDVVMSFKLFDEMLKEGIEPNAVTFLGVLSACAHGGLVEKSWLYFRLMQ 363
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIG 488
Y I P + H++ + D + RAG L E E+++ D V+G++LS C+V+GN+ +G
Sbjct: 364 -EYNIVPELKHYASVADCMSRAGLLEEAEKFLEDMPVKPDEAVMGAVLSGCKVYGNVEVG 422
Query: 489 ERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
ER+A+ L+++ P S YV L+ LY++ G ++E S R+ +K + K PG
Sbjct: 423 ERVARELIQLKPRKASYYVTLAGLYSAAGRFDEAESLRQWMKEKQISKVPG 473
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 188/435 (43%), Gaps = 46/435 (10%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVV-LARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLF 88
L S+V +S++L+ Y K + + VF M RN SW+ +I + + G ++ LF
Sbjct: 62 LYSNVVLSSKLVLAYSKLNHLFPTSLSVFWHMPYRNIFSWNIIIGEFSRSGFASKSIDLF 121
Query: 89 SQMK----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMK 144
+M V P++F L AC++ R G IH L L+ G++S FVS++L+ MY+
Sbjct: 122 LRMWRESCVRPDDFTLPLILRACSASREAKSGDLIHVLCLKLGFSSSLFVSSALVIMYVD 181
Query: 145 CGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGL 204
G+ A ++ + +SV Y A+ G+V+ E G +F+ M GF D V L
Sbjct: 182 MGKLLHARKLFDDMPVRDSVLYTAMFGGYVQQGEAMLGLAMFREMGYSGFALDSVVMVSL 241
Query: 205 LGFSTNLDDFRTGMSLHCQAVKLALDCTPL-IGNVIMSMYAQFNFIEEVVRVFRLIQDKD 263
L L + G S+H ++ C L +GN I MY + + ++ VF + +D
Sbjct: 242 LMACGQLGALKHGKSVHGWCIRRC-SCLGLNLGNAITDMYVKCSILDYAHTVFVNMSRRD 300
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
VISW++LI + D SF F EM+ E I P+ TF +L++C H + ++
Sbjct: 301 VISWSSLILGYGLDGDVVMSFKLFDEMLKE-GIEPNAVTFLGVLSACA-HGGLVEKSWLY 358
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGE 383
FR Q +++ L + ++ GL E
Sbjct: 359 ---FRLMQEYNI---------------------------VPELKHYASVADCMSRAGLLE 388
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP-NIGHFSC 442
A + E M VKPD +L C G V G+ + + P ++
Sbjct: 389 EAEKFLEDMP---VKPDEAVMGAVLSGCKVYGNVEVGERVAREL---IQLKPRKASYYVT 442
Query: 443 LIDMLGRAGRLSEVE 457
L + AGR E E
Sbjct: 443 LAGLYSAAGRFDEAE 457
>AT5G40405.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16169315-16171153 FORWARD
LENGTH=612
Length = 612
Score = 212 bits (539), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 127/462 (27%), Positives = 225/462 (48%), Gaps = 44/462 (9%)
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV-YANSVGTNS-----VSYNALI 170
+QIH Y + + L+ ++K SD + YAN + S + N++I
Sbjct: 23 RQIHA----KLYVDGTLKDDHLVGHFVKAVALSDHKYLDYANQILDRSEKPTLFALNSMI 78
Query: 171 SGFVENHEPEKGFEVFKLMLQEG--FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLA 228
++ PEK F+ ++ +L G PD ++ L+ T L TG+ +H ++
Sbjct: 79 RAHCKSPVPEKSFDFYRRILSSGNDLKPDNYTVNFLVQACTGLRMRETGLQVHGMTIRRG 138
Query: 229 LDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ---------------------------- 260
D P + ++S+YA+ ++ +VF I
Sbjct: 139 FDNDPHVQTGLISLYAELGCLDSCHKVFNSIPCPDFVCRTAMVTACARCGDVVFARKLFE 198
Query: 261 ---DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
++D I+WN +I+ ++ + ++ F M E ++ + S+L++CT +
Sbjct: 199 GMPERDPIAWNAMISGYAQVGESREALNVFHLMQLE-GVKVNGVAMISVLSACTQLGALD 257
Query: 318 HGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
G+ H+++ R + V + LV++YAKCG + A +VF M +N+ +W++ +
Sbjct: 258 QGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLA 317
Query: 378 NHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNI 437
+G GE+ +E+F MK +GV P++VTF +L C+ G V +G +F+SM +GI P +
Sbjct: 318 MNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQRHFDSMRNEFGIEPQL 377
Query: 438 GHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
H+ CL+D+ RAGRL + I + V SLL A R++ N+ +G +K +LE
Sbjct: 378 EHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKNLELGVLASKKMLE 437
Query: 498 VPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
+ YVLLSN+YA W+ V+ R+ +K G+RK+PG
Sbjct: 438 LETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPG 479
Score = 115 bits (288), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 130/252 (51%), Gaps = 7/252 (2%)
Query: 46 KCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFAS 102
+CG VV ARK+F+GM ER+ ++W+AMISGY Q GE AL++F M+ V N S
Sbjct: 186 RCGDVVFARKLFEGMPERDPIAWNAMISGYAQVGESREALNVFHLMQLEGVKVNGVAMIS 245
Query: 103 TLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTN 162
LSAC L AL QG+ H R+ ++ +L+ +Y KCG A+ V+ N
Sbjct: 246 VLSACTQLGALDQGRWAHSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKN 305
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHC 222
++++ ++G N EK E+F LM Q+G P+ +FV +L + + G H
Sbjct: 306 VYTWSSALNGLAMNGFGEKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HF 364
Query: 223 QAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVRVFRLIQDKD-VISWNTLINAFSHFDD 279
+++ P + + ++ +YA+ +E+ V + + + K W++L++A + +
Sbjct: 365 DSMRNEFGIEPQLEHYGCLVDLYARAGRLEDAVSIIQQMPMKPHAAVWSSLLHASRMYKN 424
Query: 280 QGKSFLFFKEMM 291
L K+M+
Sbjct: 425 LELGVLASKKML 436
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 6/138 (4%)
Query: 22 HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEH 81
H+ + + ++ V ++ L+++Y KCG + A +VF GM E+N +WS+ ++G G
Sbjct: 263 HSYIERNKIKITVRLATTLVDLYAKCGDMEKAMEVFWGMEEKNVYTWSSALNGLAMNGFG 322
Query: 82 WMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN-- 136
L LFS MK V PN F S L C+ + + +GQ+ H S+R+ + + +
Sbjct: 323 EKCLELFSLMKQDGVTPNAVTFVSVLRGCSVVGFVDEGQR-HFDSMRNEFGIEPQLEHYG 381
Query: 137 SLITMYMKCGQCSDALSV 154
L+ +Y + G+ DA+S+
Sbjct: 382 CLVDLYARAGRLEDAVSI 399
>AT3G28640.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:10731518-10733032 REVERSE
LENGTH=504
Length = 504
Score = 211 bits (538), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 136/461 (29%), Positives = 227/461 (49%), Gaps = 19/461 (4%)
Query: 100 FASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD----ALSVY 155
+ S + A + Q + H L + G ++ + L+T ++ + A S++
Sbjct: 11 WKSLILASQRCNTVKQIKSTHSLFIIHGLHRNTYAISKLLTAFLHLPNLNKHFHYASSIF 70
Query: 156 ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML---QEGFVPDRFSFVGLLGFSTNLD 212
+ NS Y+ +I + +P G F LM+ +E P +F L+
Sbjct: 71 DSIEIPNSFVYDTMIRICSRSSQPHLGLRYFLLMVKEEEEDIAPSYLTFHFLIVACLKAC 130
Query: 213 DFRTGMSLHCQAVKLALDCTPL-IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLI 271
F G +HC VK + + + ++ +Y + + + +VF I DV+ W+ L+
Sbjct: 131 FFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPDVVKWDVLM 190
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
N + + F+EM+ + + PD+F+ + L +C + GK IH F+ ++
Sbjct: 191 NGYVRCGLGSEGLEVFREMLVK-GLEPDEFSVTTALTACAQVGALAQGKWIHEFV--KKK 247
Query: 332 YW---DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEI 388
W DV V ALV+MYAKCG I A +VF K++ RN+ SW +I + +G ++A+
Sbjct: 248 SWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTC 307
Query: 389 FEQMKAE-GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDML 447
E+++ E G+KPDSV G+L AC H G + +G +MEA Y I P H+SC++D++
Sbjct: 308 LERLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLM 367
Query: 448 GRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPP----VTT 503
RAGRL + I K V G+LL+ CR H N+ +GE K LL++
Sbjct: 368 CRAGRLDDALNLIEKMPMKPLASVWGALLNGCRTHKNVELGELAVKNLLDLEKGNVEEEE 427
Query: 504 SPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ V LSN+Y S E + R M++ G+RK PG++ L+
Sbjct: 428 AALVQLSNIYFSVQRNPEASKVRGMIEQRGVRKTPGWSVLE 468
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 6/207 (2%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGL-QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN 64
I L+ C ++ +H V+K G+ S V +L +YV+ ++ ARKVFD + + +
Sbjct: 123 IVACLKACFFSVGKQIHCWVVKNGVFLSDSHVQTGVLRIYVEDKLLLDARKVFDEIPQPD 182
Query: 65 TVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHG 121
V W +++GY +CG L +F +M V P+EF + L+ACA + AL QG+ IH
Sbjct: 183 VVKWDVLMNGYVRCGLGSEGLEVFREMLVKGLEPDEFSVTTALTACAQVGALAQGKWIHE 242
Query: 122 -LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
+ +S S FV +L+ MY KCG A+ V+ N S+ ALI G+ +
Sbjct: 243 FVKKKSWIESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAK 302
Query: 181 KGFEVF-KLMLQEGFVPDRFSFVGLLG 206
K +L ++G PD +G+L
Sbjct: 303 KAMTCLERLEREDGIKPDSVVLLGVLA 329
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS 89
++S VFV L++MY KCG + A +VF ++ RN SW+A+I GY G A+
Sbjct: 250 IESDVFVGTALVDMYAKCGCIETAVEVFKKLTRRNVFSWAALIGGYAAYGYAKKAMTCLE 309
Query: 90 QMK----VLPNEFVFASTLSACASLRALVQGQQ-IHGLSLRSGYASISFVSNSLITMYMK 144
+++ + P+ V L+ACA L +G+ + + R + ++ + +
Sbjct: 310 RLEREDGIKPDSVVLLGVLAACAHGGFLEEGRSMLENMEARYEITPKHEHYSCIVDLMCR 369
Query: 145 CGQCSDALSV 154
G+ DAL++
Sbjct: 370 AGRLDDALNL 379
>AT5G50990.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:20739453-20741281 FORWARD
LENGTH=534
Length = 534
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 103/291 (35%), Positives = 161/291 (55%), Gaps = 3/291 (1%)
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+V R D++VI+WN +I + ++ K M++ I+P+ F+FAS LA+C
Sbjct: 119 KVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDIKPNKFSFASSLAACARL 178
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMI 373
H K +H+ + + + + +ALV++YAKCG IG + +VF + ++ WN MI
Sbjct: 179 GDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMI 238
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGI 433
F HGL AI +F +M+AE V PDS+TF GLL C+H G++ +G YF M + I
Sbjct: 239 TGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSI 298
Query: 434 APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAK 493
P + H+ ++D+LGRAGR+ E E I D V+ SLLS+ R + N +GE
Sbjct: 299 QPKLEHYGAMVDLLGRAGRVKEAYELIESMPIEPDVVIWRSLLSSSRTYKNPELGE---I 355
Query: 494 LLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ + + YVLLSN+Y+S W R+++ G+RK G +WL+
Sbjct: 356 AIQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLE 406
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 94/173 (54%), Gaps = 6/173 (3%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KV 93
N ++ +K G LA+KV S++N ++W+ MI GY + ++ AL M +
Sbjct: 102 NLIIESLMKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEEALKALKNMLSFTDI 161
Query: 94 LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS 153
PN+F FAS+L+ACA L L + +H L + SG + +S++L+ +Y KCG +
Sbjct: 162 KPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALVDVYAKCGDIGTSRE 221
Query: 154 VYANSVGTNSVS-YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
V+ SV N VS +NA+I+GF + + VF M E PD +F+GLL
Sbjct: 222 VFY-SVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAEHVSPDSITFLGLL 273
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 127/279 (45%), Gaps = 11/279 (3%)
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
LSL G +I+ + SL MK G+ A V N+ N +++N +I G+V N + E+
Sbjct: 92 LSLSPGVCNINLIIESL----MKIGESGLAKKVLRNASDQNVITWNLMIGGYVRNVQYEE 147
Query: 182 GFEVFKLMLQ-EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ K ML P++FSF L L D +H + ++ ++ + ++
Sbjct: 148 ALKALKNMLSFTDIKPNKFSFASSLAACARLGDLHHAKWVHSLMIDSGIELNAILSSALV 207
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
+YA+ I VF ++ DV WN +I F+ ++ F EM E + PD
Sbjct: 208 DVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGLATEAIRVFSEMEAE-HVSPDS 266
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH-NALVNMYAKCGSIGYAHKVFS 359
TF +L +C+ GK+ + R H A+V++ + G + A+++
Sbjct: 267 ITFLGLLTTCSHCGLLEEGKEYFGLMSRRFSIQPKLEHYGAMVDLLGRAGRVKEAYELIE 326
Query: 360 KMSYR-NLISWNTMIAA---FGNHGLGERAIEIFEQMKA 394
M +++ W +++++ + N LGE AI+ + K+
Sbjct: 327 SMPIEPDVVIWRSLLSSSRTYKNPELGEIAIQNLSKAKS 365
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H+ ++ G++ + +S+ L+++Y KCG + +R+VF + + W+AMI+G+ G
Sbjct: 187 VHSLMIDSGIELNAILSSALVDVYAKCGDIGTSREVFYSVKRNDVSIWNAMITGFATHGL 246
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLR 125
A+ +FS+M+ V P+ F L+ C+ L +G++ GL R
Sbjct: 247 ATEAIRVFSEMEAEHVSPDSITFLGLLTTCSHCGLLEEGKEYFGLMSR 294
>AT3G51320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19049853-19051445 REVERSE
LENGTH=530
Length = 530
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 136/456 (29%), Positives = 223/456 (48%), Gaps = 37/456 (8%)
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
Q+H + SG S + L+ + G S +S+Y S+G + N + ++ +
Sbjct: 40 QVHARLITSGNFWDSSWAIRLLKSSSRFGDSSYTVSIY-RSIGKLYCA-NPVFKAYLVSS 97
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
P++ + +L+ GFVPD ++FV L+ +G H QA+K D + N
Sbjct: 98 SPKQALGFYFDILRFGFVPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQN 157
Query: 238 VIMSMY--------AQFNFIE----EVV-------------------RVFRLIQDKDVIS 266
+M MY A+ F+E ++V ++F + DK++IS
Sbjct: 158 SLMHMYTCCGALDLAKKLFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIIS 217
Query: 267 WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
WN +I+A+ ++ G S F+EM+ + ++ T +L +C A G+ +HA L
Sbjct: 218 WNIMISAYLGANNPGVSISLFREMV-RAGFQGNESTLVLLLNACGRSARLKEGRSVHASL 276
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAI 386
RT V + AL++MY KC +G A ++F +S RN ++WN MI A HG E +
Sbjct: 277 IRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGL 336
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDM 446
E+FE M ++PD VTF G+L C +G+V +G Y++ M + I PN GH C+ ++
Sbjct: 337 ELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQSYYSLMVDEFQIKPNFGHQWCMANL 396
Query: 447 LGRAGRLSEVEEYINKFHHLN---DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTT 503
AG E EE + + + +LLS+ R GN +GE +AK L+E P+
Sbjct: 397 YSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESIAKSLIETDPLNY 456
Query: 504 SPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPG 539
Y LL N+Y+ G W +V R+M+K + + PG
Sbjct: 457 KYYHLLMNIYSVTGRWEDVNRVREMVKERKIGRIPG 492
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 6/237 (2%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVL 94
N ++ V+ G V+ A K+FD M ++N +SW+ MIS Y +++ LF +M
Sbjct: 188 NSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVSISLFREMVRAGFQ 247
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
NE L+AC L +G+ +H +R+ S + +LI MY KC + A +
Sbjct: 248 GNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRI 307
Query: 155 YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF 214
+ + N V++N +I + PE G E+F+ M+ PD +FVG+L
Sbjct: 308 FDSLSIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLV 367
Query: 215 RTGMSLHCQAVKLALDCTPLIGN--VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT 269
G S + V P G+ + ++Y+ F EE + + D+DV +T
Sbjct: 368 SQGQSYYSLMVD-EFQIKPNFGHQWCMANLYSSAGFPEEAEEALKNLPDEDVTPEST 423
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 153/395 (38%), Gaps = 66/395 (16%)
Query: 94 LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALS 153
+P+ + F S +S + G+ HG +++ G + V NSL+ MY CG A
Sbjct: 115 VPDSYTFVSLISCIEKTCCVDSGKMCHGQAIKHGCDQVLPVQNSLMHMYTCCGALDLAKK 174
Query: 154 VYANSVGTNSVSYNALISGFVENHE-----------PEK--------------------G 182
++ + VS+N++I+G V N + P+K
Sbjct: 175 LFVEIPKRDIVSWNSIIAGMVRNGDVLAAHKLFDEMPDKNIISWNIMISAYLGANNPGVS 234
Query: 183 FEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
+F+ M++ GF + + V LL + G S+H ++ L+ + +I ++ M
Sbjct: 235 ISLFREMVRAGFQGNESTLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDM 294
Query: 243 YAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS-HFDDQGKSFLFFKEMMNECSIRPDDF 301
Y + + R+F + ++ ++WN +I A H +G LF E M +RPD+
Sbjct: 295 YGKCKEVGLARRIFDSLSIRNKVTWNVMILAHCLHGRPEGGLELF--EAMINGMLRPDEV 352
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
TF +L C G+ ++ + Q + H+
Sbjct: 353 TFVGVLCGCARAGLVSQGQSYYSLMVDEFQI-----------------KPNFGHQ----- 390
Query: 362 SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
W M + + G E A E + + E V P+S + LL + +G G+
Sbjct: 391 -------W-CMANLYSSAGFPEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGE 442
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
S+ + N ++ L+++ GR +V
Sbjct: 443 SIAKSLIETDPL--NYKYYHLLMNIYSVTGRWEDV 475
Score = 72.8 bits (177), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 44/270 (16%)
Query: 5 TIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
T+ LL C ++ +HA++++ L S V + L++MY KC V LAR++FD +
Sbjct: 252 TLVLLLNACGRSARLKEGRSVHASLIRTFLNSSVVIDTALIDMYGKCKEVGLARRIFDSL 311
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQ 117
S RN V+W+ MI + G L LF M + P+E F L CA + QGQ
Sbjct: 312 SIRNKVTWNVMILAHCLHGRPEGGLELFEAMINGMLRPDEVTFVGVLCGCARAGLVSQGQ 371
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
+ L + +F G ++Y++ +GF
Sbjct: 372 SYYSLMVDEFQIKPNF------------GHQWCMANLYSS-------------AGF---- 402
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL--- 234
PE+ E K + E P+ + LL S + G S+ K ++ PL
Sbjct: 403 -PEEAEEALKNLPDEDVTPESTKWANLLSSSRFTGNPTLGESI----AKSLIETDPLNYK 457
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKDV 264
+++M++Y+ E+V RV +++++ +
Sbjct: 458 YYHLLMNIYSVTGRWEDVNRVREMVKERKI 487
>AT1G19720.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:6819926-6822610 REVERSE
LENGTH=894
Length = 894
Score = 204 bits (520), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 138/529 (26%), Positives = 251/529 (47%), Gaps = 46/529 (8%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE----RNTVSWSAMISGYDQCGEHW 82
K G+ + N L+ Y + G+ A + M + +W+AMISG G +
Sbjct: 275 KEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMETFGITADVFTWTAMISGLIHNGMRY 334
Query: 83 MALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLI 139
AL +F +M V+PN S +SAC+ L+ + QG ++H ++++ G+ V NSL+
Sbjct: 335 QALDMFRKMFLAGVVPNAVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLV 394
Query: 140 TMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
MY KCG+ DA V+ + + ++N++I+G+ + K +E+F M P+
Sbjct: 395 DMYSKCGKLEDARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNII 454
Query: 200 SFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
++ ++ G+ N D+ A+D F +E+ +V R
Sbjct: 455 TWNTMISGYIKNGDEGE------------AMDL--------------FQRMEKDGKVQR- 487
Query: 259 IQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
+ +WN +I + + ++ F++M P+ T S+L +C A+ L
Sbjct: 488 ----NTATWNLIIAGYIQNGKKDEALELFRKMQFS-RFMPNSVTILSLLPAC---ANLLG 539
Query: 319 GK---QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAA 375
K +IH + R V NAL + YAK G I Y+ +F M +++I+WN++I
Sbjct: 540 AKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGMETKDIITWNSLIGG 599
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
+ HG A+ +F QMK +G+ P+ T + +++A G V +G F S+ Y I P
Sbjct: 600 YVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGKKVFYSIANDYHIIP 659
Query: 436 NIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
+ H S ++ + GRA RL E ++I + + ++ + S L+ CR+HG++ + A+ L
Sbjct: 660 ALEHCSAMVYLYGRANRLEEALQFIQEMNIQSETPIWESFLTGCRIHGDIDMAIHAAENL 719
Query: 496 LEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
+ P T+ ++S +YA K + + L+K G +W++
Sbjct: 720 FSLEPENTATESIVSQIYALGAKLGRSLEGNKPRRDNLLKKPLGQSWIE 768
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 135/488 (27%), Positives = 227/488 (46%), Gaps = 57/488 (11%)
Query: 9 LLQRC--SKTMTFG--LHAAVLKIGL--QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
LL+ C S ++ G LHA + GL + VFV +LL+MY KCG + ARKVFD M E
Sbjct: 87 LLESCIDSGSIHLGRILHA---RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSMRE 143
Query: 63 RNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQI 119
RN +WSAMI Y + LF M VLP++F+F L CA+ + G+ I
Sbjct: 144 RNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGKVI 203
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEP 179
H + ++ G +S VSNS++ +Y KCG+ A + + +++N+++ + +N +
Sbjct: 204 HSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRERDVIAWNSVLLAYCQNGKH 263
Query: 180 EKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVI 239
E+ E+ K M +EG P ++ L+G L M L
Sbjct: 264 EEAVELVKEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDL------------------- 304
Query: 240 MSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
M F DV +W +I+ H + ++ F++M + P+
Sbjct: 305 MQKMETFGIT------------ADVFTWTAMISGLIHNGMRYQALDMFRKMF-LAGVVPN 351
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
T S +++C+ G ++H+ + DV V N+LV+MY+KCG + A KVF
Sbjct: 352 AVTIMSAVSACSCLKVINQGSEVHSIAVKMGFIDDVLVGNSLVDMYSKCGKLEDARKVFD 411
Query: 360 KMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
+ +++ +WN+MI + G +A E+F +M+ ++P+ +T+ ++ SG ++
Sbjct: 412 SVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANLRPNIITWNTMI-----SGYIKN 466
Query: 420 GDL-----YFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH---HLNDPVV 471
GD F ME + N ++ +I + G+ E E K + + V
Sbjct: 467 GDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDEALELFRKMQFSRFMPNSVT 526
Query: 472 LGSLLSAC 479
+ SLL AC
Sbjct: 527 ILSLLPAC 534
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 6/211 (2%)
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
T+ +L SC S G+ +HA F DV V L++MYAKCG I A KVF M
Sbjct: 83 TYLKLLESCIDSGSIHLGRILHA-RFGLFTEPDVFVETKLLSMYAKCGCIADARKVFDSM 141
Query: 362 SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
RNL +W+ MI A+ ++F M +GV PD F +L C + G V G
Sbjct: 142 RERNLFTWSAMIGAYSRENRWREVAKLFRLMMKDGVLPDDFLFPKILQGCANCGDVEAGK 201
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRV 481
+ +S+ G++ + + ++ + + G L ++ + D + S+L A
Sbjct: 202 V-IHSVVIKLGMSSCLRVSNSILAVYAKCGELDFATKFFRRMRE-RDVIAWNSVLLAYCQ 259
Query: 482 HGNMAIGERLAKLLLEVPPVTTSPYVLLSNL 512
+G E +L+ E+ SP ++ N+
Sbjct: 260 NGKH---EEAVELVKEMEKEGISPGLVTWNI 287
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 81/157 (51%), Gaps = 10/157 (6%)
Query: 5 TIGTLLQRCSK----TMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI +LL C+ M +H VL+ L + V N L + Y K G + +R +F GM
Sbjct: 526 TILSLLPACANLLGAKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIEYSRTIFLGM 585
Query: 61 SERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQ 117
++ ++W+++I GY G + AL LF+QMK + PN +S + A + + +G+
Sbjct: 586 ETKDIITWNSLIGGYVLHGSYGPALALFNQMKTQGITPNRGTLSSIILAHGLMGNVDEGK 645
Query: 118 QIHGLSLRSGYASISFVS--NSLITMYMKCGQCSDAL 152
++ S+ + Y I + ++++ +Y + + +AL
Sbjct: 646 KVF-YSIANDYHIIPALEHCSAMVYLYGRANRLEEAL 681
>AT3G21470.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr3:7563503-7565074 FORWARD
LENGTH=523
Length = 523
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/480 (29%), Positives = 231/480 (48%), Gaps = 51/480 (10%)
Query: 104 LSACASL-RALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTN 162
L ACA + +V G+ +H S++ G S V +SLI+MY KCG A V+ N
Sbjct: 52 LRACACVVPRVVLGKLLHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERN 111
Query: 163 SVSYNALISGFVENH--------------------------------EPEKGFEVFKLML 190
++NA+I G++ N E EK E+F+ M
Sbjct: 112 VATWNAMIGGYMSNGDAVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMP 171
Query: 191 QEGFVPDRFSFVGLLGFSTN---LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN 247
E + + ++ +LG N ++D R + + + + +++MS Y +
Sbjct: 172 FE--LKNVKAWSVMLGVYVNNRKMEDAR-------KFFEDIPEKNAFVWSLMMSGYFRIG 222
Query: 248 FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL 307
+ E +F + +D++ WNTLI ++ + F M E PD T +SIL
Sbjct: 223 DVHEARAIFYRVFARDLVIWNTLIAGYAQNGYSDDAIDAFFNMQGE-GYEPDAVTVSSIL 281
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI 367
++C G+++H+ + + V NAL++MYAKCG + A VF +S R++
Sbjct: 282 SACAQSGRLDVGREVHSLINHRGIELNQFVSNALIDMYAKCGDLENATSVFESISVRSVA 341
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
N+MI+ HG G+ A+E+F M++ +KPD +TF +L AC H G + +G F+ M
Sbjct: 342 CCNSMISCLAIHGKGKEALEMFSTMESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEM 401
Query: 428 EAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAI 487
+ + PN+ HF CLI +LGR+G+L E + + H + VLG+LL AC+VH + +
Sbjct: 402 KTQ-DVKPNVKHFGCLIHLLGRSGKLKEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEM 460
Query: 488 GERLAKLLLEVPPVTTS----PYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWL 543
E++ K++ +T S +SNLYA W + R ++ GL K PG + L
Sbjct: 461 AEQVMKIIETAGSITNSYSENHLASISNLYAHTERWQTAEALRVEMEKRGLEKSPGLSSL 520
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 31/406 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
LH+ +K G+ S V V + L++MY KCG VV ARKVFD M ERN +W+AMI GY G+
Sbjct: 68 LHSESIKFGVCSDVMVGSSLISMYGKCGCVVSARKVFDEMPERNVATWNAMIGGYMSNGD 127
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH-----------------GLS 123
+A LF ++ V N + + + + +++ G+
Sbjct: 128 AVLASGLFEEISVCRNTVTWIEMIKGYGKRIEIEKARELFERMPFELKNVKAWSVMLGVY 187
Query: 124 L--------RSGYASI----SFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALIS 171
+ R + I +FV + +++ Y + G +A +++ + V +N LI+
Sbjct: 188 VNNRKMEDARKFFEDIPEKNAFVWSLMMSGYFRIGDVHEARAIFYRVFARDLVIWNTLIA 247
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
G+ +N + + F M EG+ PD + +L G +H ++
Sbjct: 248 GYAQNGYSDDAIDAFFNMQGEGYEPDAVTVSSILSACAQSGRLDVGREVHSLINHRGIEL 307
Query: 232 TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM 291
+ N ++ MYA+ +E VF I + V N++I+ + +GK L M
Sbjct: 308 NQFVSNALIDMYAKCGDLENATSVFESISVRSVACCNSMISCLA-IHGKGKEALEMFSTM 366
Query: 292 NECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI 351
++PD+ TF ++L +C + G +I + + +V L+++ + G +
Sbjct: 367 ESLDLKPDEITFIAVLTACVHGGFLMEGLKIFSEMKTQDVKPNVKHFGCLIHLLGRSGKL 426
Query: 352 GYAHKVFSKMSYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAEG 396
A+++ +M + N ++ A H E A ++ + ++ G
Sbjct: 427 KEAYRLVKEMHVKPNDTVLGALLGACKVHMDTEMAEQVMKIIETAG 472
>AT1G06150.1 | Symbols: EMB1444 | basic helix-loop-helix (bHLH)
DNA-binding superfamily protein | chr1:1867129-1873194
REVERSE LENGTH=1322
Length = 1322
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/545 (24%), Positives = 248/545 (45%), Gaps = 49/545 (8%)
Query: 6 IGTLLQRCS--KTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER 63
+ ++++CS K + L AA++K L + NQ + R+ LA M E
Sbjct: 776 LKKIIKQCSTPKLLESAL-AAMIKTSLNQDCRLMNQFITACTSFKRLDLAVSTMTQMQEP 834
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIH 120
N ++A+ G+ C +L L+ +M V P+ + ++S + A + + Q H
Sbjct: 835 NVFVYNALFKGFVTCSHPIRSLELYVRMLRDSVSPSSYTYSSLVKASSFASRFGESLQAH 894
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
G+ + +LI Y G+ +A V+ + +++ ++S +
Sbjct: 895 IWKF--GFGFHVKIQTTLIDFYSATGRIREARKVFDEMPERDDIAWTTMVSAY------- 945
Query: 181 KGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIM 240
+ D + SL Q + N ++
Sbjct: 946 ----------------------------RRVLDMDSANSLANQMS----EKNEATSNCLI 973
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
+ Y +E+ +F + KD+ISW T+I +S ++ F +MM E I PD+
Sbjct: 974 NGYMGLGNLEQAESLFNQMPVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEE-GIIPDE 1032
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
T ++++++C GK++H + + DV + +ALV+MY+KCGS+ A VF
Sbjct: 1033 VTMSTVISACAHLGVLEIGKEVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFN 1092
Query: 361 MSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
+ +NL WN++I HG + A+++F +M+ E VKP++VTF + AC H+G+V +G
Sbjct: 1093 LPKKNLFCWNSIIEGLAAHGFAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEG 1152
Query: 421 DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACR 480
+ SM Y I N+ H+ ++ + +AG + E E I + V+ G+LL CR
Sbjct: 1153 RRIYRSMIDDYSIVSNVEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLDGCR 1212
Query: 481 VHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE-PG 539
+H N+ I E L+ + P+ + Y LL ++YA W +V R ++ G+ K PG
Sbjct: 1213 IHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPG 1272
Query: 540 YAWLK 544
+ ++
Sbjct: 1273 TSSIR 1277
Score = 92.8 bits (229), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 142/341 (41%), Gaps = 77/341 (22%)
Query: 5 TIGTLLQRCSKTMTFG--LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE 62
T +L++ S FG L A + K G HV + L++ Y GR+ ARKVFD M E
Sbjct: 873 TYSSLVKASSFASRFGESLQAHIWKFGFGFHVKIQTTLIDFYSATGRIREARKVFDEMPE 932
Query: 63 RNTVSWSAMISGYDQC-------------------------------GEHWMALHLFSQM 91
R+ ++W+ M+S Y + G A LF+QM
Sbjct: 933 RDDIAWTTMVSAYRRVLDMDSANSLANQMSEKNEATSNCLINGYMGLGNLEQAESLFNQM 992
Query: 92 KV----------------------------------LPNEFVFASTLSACASLRALVQGQ 117
V +P+E ++ +SACA L L G+
Sbjct: 993 PVKDIISWTTMIKGYSQNKRYREAIAVFYKMMEEGIIPDEVTMSTVISACAHLGVLEIGK 1052
Query: 118 QIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENH 177
++H +L++G+ ++ ++L+ MY KCG AL V+ N N +N++I G +
Sbjct: 1053 EVHMYTLQNGFVLDVYIGSALVDMYSKCGSLERALLVFFNLPKKNLFCWNSIIEGLAAHG 1112
Query: 178 EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN 237
++ ++F M E P+ +FV + T+ G ++ + +D ++ N
Sbjct: 1113 FAQEALKMFAKMEMESVKPNAVTFVSVFTACTHAGLVDEGRRIY----RSMIDDYSIVSN 1168
Query: 238 V-----IMSMYAQFNFIEEVVRVFRLIQ-DKDVISWNTLIN 272
V ++ ++++ I E + + ++ + + + W L++
Sbjct: 1169 VEHYGGMVHLFSKAGLIYEALELIGNMEFEPNAVIWGALLD 1209
>AT1G34160.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:12441393-12443225 FORWARD
LENGTH=581
Length = 581
Score = 204 bits (518), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 128/442 (28%), Positives = 222/442 (50%), Gaps = 21/442 (4%)
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKC-----GQCSDALSVYANSVGTNSVSYNAL 169
Q +Q+ L +G+ SF+ + L+ +C G S A+ ++ + +NA+
Sbjct: 18 QIKQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIPKPLTNDWNAI 74
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGM------SLHCQ 223
I GF + P F ++ MLQ+ V L S L + LHCQ
Sbjct: 75 IRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACARALCSSAMDQLHCQ 134
Query: 224 AVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
+ L L+ ++ Y++ + ++F + +DV SWN LI + ++
Sbjct: 135 INRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALIAGLVSGNRASEA 194
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
+K M E IR + T + L +C+ G+ I F +V V NA ++
Sbjct: 195 MELYKRMETE-GIRRSEVTVVAALGACSHLGDVKEGENI----FHGYSNDNVIVSNAAID 249
Query: 344 MYAKCGSIGYAHKVFSKMS-YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSV 402
MY+KCG + A++VF + + +++++WNTMI F HG RA+EIF++++ G+KPD V
Sbjct: 250 MYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFDKLEDNGIKPDDV 309
Query: 403 TFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINK 462
++ L AC H+G+V G FN+M A G+ N+ H+ C++D+L RAGRL E + I
Sbjct: 310 SYLAALTACRHAGLVEYGLSVFNNM-ACKGVERNMKHYGCVVDLLSRAGRLREAHDIICS 368
Query: 463 FHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEV 522
+ DPV+ SLL A ++ ++ + E ++ + E+ +VLLSN+YA+ G W +V
Sbjct: 369 MSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNNDGDFVLLSNVYAAQGRWKDV 428
Query: 523 TSARKMLKGSGLRKEPGYAWLK 544
R ++ ++K PG ++++
Sbjct: 429 GRVRDDMESKQVKKIPGLSYIE 450
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/413 (22%), Positives = 183/413 (44%), Gaps = 31/413 (7%)
Query: 8 TLLQRC-SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKC-----GRVVLARKVFDGMS 61
T++Q+C S + L + L G F+ ++LL +C G + A ++F +
Sbjct: 8 TMIQKCVSFSQIKQLQSHFLTAGHFQSSFLRSRLLE---RCAISPFGDLSFAVQIFRYIP 64
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLP---------NEFVFASTLSACASLRA 112
+ T W+A+I G+ +A + M + + TL ACA RA
Sbjct: 65 KPLTNDWNAIIRGFAGSSHPSLAFSWYRSMLQQSSSSSAICRVDALTCSFTLKACA--RA 122
Query: 113 LVQG--QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALI 170
L Q+H R G ++ S + +L+ Y K G A ++ + S+NALI
Sbjct: 123 LCSSAMDQLHCQINRRGLSADSLLCTTLLDAYSKNGDLISAYKLFDEMPVRDVASWNALI 182
Query: 171 SGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSL-HCQAVKLAL 229
+G V + + E++K M EG + V LG ++L D + G ++ H +
Sbjct: 183 AGLVSGNRASEAMELYKRMETEGIRRSEVTVVAALGACSHLGDVKEGENIFHGYS----- 237
Query: 230 DCTPLIGNVIMSMYAQFNFIEEVVRVF-RLIQDKDVISWNTLINAFSHFDDQGKSFLFFK 288
+ ++ N + MY++ F+++ +VF + K V++WNT+I F+ + ++ F
Sbjct: 238 NDNVIVSNAAIDMYSKCGFVDKAYQVFEQFTGKKSVVTWNTMITGFAVHGEAHRALEIFD 297
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC 348
++ + I+PDD ++ + L +C +G + + ++ + +V++ ++
Sbjct: 298 KLEDN-GIKPDDVSYLAALTACRHAGLVEYGLSVFNNMACKGVERNMKHYGCVVDLLSRA 356
Query: 349 GSIGYAHKVFSKMS-YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
G + AH + MS + + W +++ A + E A ++K GV D
Sbjct: 357 GRLREAHDIICSMSMIPDPVLWQSLLGASEIYSDVEMAEIASREIKEMGVNND 409
>AT1G09190.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:2966263-2967717 REVERSE
LENGTH=484
Length = 484
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 215/445 (48%), Gaps = 40/445 (8%)
Query: 135 SNSLITMYMK-CGQCSDALSVYANSV-----GTNSVSYNALISGFVENHEPEKGFEVFKL 188
SN L+ ++ CG S+ S YAN V N + +NA+I + P + F
Sbjct: 35 SNLLLAHFISICGSLSN--SDYANRVFSHIQNPNVLVFNAMIKCYSLVGPPLESLSFFSS 92
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
M G D +++ LL ++L D R G +H + ++ I ++ +Y
Sbjct: 93 MKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRTGFHRLGKIRIGVVELYTSGGR 152
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM--------------MNEC 294
+ + +VF + +++V+ WN +I F D + FK+M +++C
Sbjct: 153 MGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLFKQMSERSIVSWNSMISSLSKC 212
Query: 295 S----------------IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD-VGV 337
PD+ T ++L GK IH+ + + D + V
Sbjct: 213 GRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLDTGKWIHSTAESSGLFKDFITV 272
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEG- 396
NALV+ Y K G + A +F KM RN++SWNT+I+ +G GE I++F+ M EG
Sbjct: 273 GNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISGSAVNGKGEFGIDLFDAMIEEGK 332
Query: 397 VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
V P+ TF G+L C+++G V +G+ F M + + H+ ++D++ R+GR++E
Sbjct: 333 VAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLEARTEHYGAMVDLMSRSGRITEA 392
Query: 457 EEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASD 516
+++ + + GSLLSACR HG++ + E A L+++ P + YVLLSNLYA +
Sbjct: 393 FKFLKNMPVNANAAMWGSLLSACRSHGDVKLAEVAAMELVKIEPGNSGNYVLLSNLYAEE 452
Query: 517 GMWNEVTSARKMLKGSGLRKEPGYA 541
G W +V R ++K + LRK G +
Sbjct: 453 GRWQDVEKVRTLMKKNRLRKSTGQS 477
Score = 135 bits (339), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 107/415 (25%), Positives = 188/415 (45%), Gaps = 59/415 (14%)
Query: 14 SKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVK-CGRVV---LARKVFDGMSERNTVSWS 69
++T +HA +L+ L SN LL ++ CG + A +VF + N + ++
Sbjct: 16 TRTRLPEIHAHLLRHFLHG----SNLLLAHFISICGSLSNSDYANRVFSHIQNPNVLVFN 71
Query: 70 AMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRS 126
AMI Y G +L FS MK + +E+ +A L +C+SL L G+ +HG +R+
Sbjct: 72 AMIKCYSLVGPPLESLSFFSSMKSRGIWADEYTYAPLLKSCSSLSDLRFGKCVHGELIRT 131
Query: 127 GYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVF 186
G+ + + ++ +Y G+ DA V+ N V +N +I GF ++ + E+G +F
Sbjct: 132 GFHRLGKIRIGVVELYTSGGRMGDAQKVFDEMSERNVVVWNLMIRGFCDSGDVERGLHLF 191
Query: 187 KLM-------------------------------LQEGFVPDRFSFVGLLGFSTNLDDFR 215
K M + +GF PD + V +L S +L
Sbjct: 192 KQMSERSIVSWNSMISSLSKCGRDREALELFCEMIDQGFDPDEATVVTVLPISASLGVLD 251
Query: 216 TGMSLHCQAVKLALDCTPL-IGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAF 274
TG +H A L + +GN ++ Y + +E +FR +Q ++V+SWNTLI+
Sbjct: 252 TGKWIHSTAESSGLFKDFITVGNALVDFYCKSGDLEAATAIFRKMQRRNVVSWNTLISG- 310
Query: 275 SHFDDQGK-SFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF------ 327
S + +G+ F M+ E + P++ TF +LA C++ G+++ +
Sbjct: 311 SAVNGKGEFGIDLFDAMIEEGKVAPNEATFLGVLACCSYTGQVERGEELFGLMMERFKLE 370
Query: 328 -RTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISWNTMIAAFGNHG 380
RT Y A+V++ ++ G I A K M N W ++++A +HG
Sbjct: 371 ARTEHY------GAMVDLMSRSGRITEAFKFLKNMPVNANAAMWGSLLSACRSHG 419
>AT1G10330.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:3388747-3390150 FORWARD
LENGTH=467
Length = 467
Score = 198 bits (504), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 134/445 (30%), Positives = 221/445 (49%), Gaps = 23/445 (5%)
Query: 115 QGQQIHGLSLRSGYASIS-----FVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVS 165
Q +QIH + L S S V N+LI Y+ G+ +L+++ A+ V N+++
Sbjct: 29 QIKQIHTVLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFTHMLASHVQPNNLT 88
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF---SFVGLLGFSTNLDDFRTGMSLHC 222
+ +LI + G + L+ GF+ D F SFV G +L+ R
Sbjct: 89 FPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVGDLESSR------- 141
Query: 223 QAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGK 282
+ L+ + N ++ + ++ F+ + DV+SW T+IN FS K
Sbjct: 142 KMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSKKGLHAK 201
Query: 283 SFLFFKEMM-NE-CSIRPDDFTFASILASCTW--HASFLHGKQIHAFLFRTRQYWDVGVH 338
+ + F EM+ NE I P++ TF S+L+SC GKQIH ++ +
Sbjct: 202 ALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEIILTTTLG 261
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
AL++MY K G + A +F ++ + + +WN +I+A ++G ++A+E+FE MK+ V
Sbjct: 262 TALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALASNGRPKQALEMFEMMKSSYVH 321
Query: 399 PDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEE 458
P+ +T +L AC S +V G F+S+ + Y I P H+ C++D++GRAG L +
Sbjct: 322 PNGITLLAILTACARSKLVDLGIQLFSSICSEYKIIPTSEHYGCVVDLIGRAGLLVDAAN 381
Query: 459 YINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGM 518
+I D VLG+LL AC++H N +G + K L+ + P YV LS A D
Sbjct: 382 FIQSLPFEPDASVLGALLGACKIHENTELGNTVGKQLIGLQPQHCGQYVALSTFNALDSN 441
Query: 519 WNEVTSARKMLKGSGLRKEPGYAWL 543
W+E RK + +G+RK P Y+ L
Sbjct: 442 WSEAEKMRKAMIEAGIRKIPAYSVL 466
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 134/320 (41%), Gaps = 44/320 (13%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFS 89
LQ ++ SNQ+ ++ V+L + ++ +I Y GE+ +L LF+
Sbjct: 20 LQRFLYSSNQIKQIHT----VLLTSNALVASRWKTKCVYNTLIRSYLTTGEYKTSLALFT 75
Query: 90 QM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCG 146
M V PN F S + A S ++ G +HG +L+ G+ FV S + Y + G
Sbjct: 76 HMLASHVQPNNLTFPSLIKAACSSFSVSYGVALHGQALKRGFLWDPFVQTSFVRFYGEVG 135
Query: 147 Q--------------CSDALSVYANSVG-----------------TNSVSYNALISGFVE 175
C A + ++ G T+ VS+ +I+GF +
Sbjct: 136 DLESSRKMFDDILNPCVVACNSLLDACGRNGEMDYAFEYFQRMPVTDVVSWTTVINGFSK 195
Query: 176 NHEPEKGFEVFKLMLQEG---FVPDRFSFVGLLGFSTNLDD--FRTGMSLHCQAVKLALD 230
K VF M+Q P+ +FV +L N D R G +H + +
Sbjct: 196 KGLHAKALMVFGEMIQNERAVITPNEATFVSVLSSCANFDQGGIRLGKQIHGYVMSKEII 255
Query: 231 CTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEM 290
T +G ++ MY + +E + +F I+DK V +WN +I+A + + + K L EM
Sbjct: 256 LTTTLGTALLDMYGKAGDLEMALTIFDQIRDKKVCAWNAIISALAS-NGRPKQALEMFEM 314
Query: 291 MNECSIRPDDFTFASILASC 310
M + P+ T +IL +C
Sbjct: 315 MKSSYVHPNGITLLAILTAC 334
>AT5G61800.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24830054-24831553 REVERSE
LENGTH=499
Length = 499
Score = 197 bits (502), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 136/493 (27%), Positives = 219/493 (44%), Gaps = 58/493 (11%)
Query: 105 SACASL----RALVQGQQIHGLSLRSGYASISFVSNSL-------ITMYMKCGQCSDALS 153
S+C+ L R L Q H + SG S F NS+ IT S +
Sbjct: 5 SSCSYLLKLCRTLKHLHQFHAQFITSGRISNDFKQNSVFANVLFAITSISPSASASKEVV 64
Query: 154 VYANSV-----GTNSVSYNALISGFVENHEPEK--GFEVFKLMLQEGFVPD--RFSFVGL 204
YA SV ++ +N +I HEP F M + PD F FV
Sbjct: 65 SYATSVFRFITNPSTFCFNTIIR-ICTLHEPSSLSSKRFFVEMRRRSVPPDFHTFPFVFK 123
Query: 205 LGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE-------------- 250
+ D +LHCQA++ L N ++ +Y+ I+
Sbjct: 124 ACAAKKNGDLTLVKTLHCQALRFGLLSDLFTLNTLIRVYSLIAPIDSALQLFDENPQRDV 183
Query: 251 --------------EVVRVFRLIQD---KDVISWNTLINAFSHFDDQGKSFLFFKEMMNE 293
E+VR L +D++SWN+LI+ ++ + ++ F EM+
Sbjct: 184 VTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDEMV-A 242
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGY 353
++PD+ S L++C + GK IH + R R + D + LV+ YAKCG I
Sbjct: 243 LGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGFIDT 302
Query: 354 AHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
A ++F S + L +WN MI HG GE ++ F +M + G+KPD VTF +L+ C+H
Sbjct: 303 AMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVLVGCSH 362
Query: 414 SGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFH----HLNDP 469
SG+V + F+ M + Y + + H+ C+ D+LGRAG + E E I + +
Sbjct: 363 SGLVDEARNLFDQMRSLYDVNREMKHYGCMADLLGRAGLIEEAAEMIEQMPKDGGNREKL 422
Query: 470 VVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKML 529
+ LL CR+HGN+ I E+ A + + P Y ++ +YA+ W EV R+++
Sbjct: 423 LAWSGLLGGCRIHGNIEIAEKAANRVKALSPEDGGVYKVMVEMYANAERWEEVVKVREII 482
Query: 530 -KGSGLRKEPGYA 541
+ ++K G++
Sbjct: 483 DRDKKVKKNVGFS 495
Score = 100 bits (249), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 3/178 (1%)
Query: 31 QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQ 90
Q V N L++ VK +V AR++FD M R+ VSW+++ISGY Q A+ LF +
Sbjct: 180 QRDVVTYNVLIDGLVKAREIVRARELFDSMPLRDLVSWNSLISGYAQMNHCREAIKLFDE 239
Query: 91 MKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ 147
M L P+ STLSACA +G+ IH + R SF++ L+ Y KCG
Sbjct: 240 MVALGLKPDNVAIVSTLSACAQSGDWQKGKAIHDYTKRKRLFIDSFLATGLVDFYAKCGF 299
Query: 148 CSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
A+ ++ ++NA+I+G + E + F+ M+ G PD +F+ +L
Sbjct: 300 IDTAMEIFELCSDKTLFTWNAMITGLAMHGNGELTVDYFRKMVSSGIKPDGVTFISVL 357
>AT4G22760.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:11960553-11962289 FORWARD
LENGTH=578
Length = 578
Score = 197 bits (500), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 131/522 (25%), Positives = 255/522 (48%), Gaps = 28/522 (5%)
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSA 106
V +++ G + ++ SW ++ Q + + ++ M + P+ S L A
Sbjct: 54 VTYVKRILKGFNGHDSFSWGCLVRFLSQHRKFKETVDVYIDMHNSGIPPSSHAVTSVLRA 113
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY 166
C + +V G+ IH +L++G +V L+ +Y + G A + + N+VS+
Sbjct: 114 CGKMENMVDGKPIHAQALKNGLCGCVYVQTGLVGLYSRLGYIELAKKAFDDIAEKNTVSW 173
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFVP-----DRFSFVGLLGFSTNLD--------- 212
N+L+ G++E+ E ++ VF + ++ V ++ G +G + +L
Sbjct: 174 NSLLHGYLESGELDEARRVFDKIPEKDAVSWNLIISSYAKKGDMGNACSLFSAMPLKSPA 233
Query: 213 --DFRTGMSLHCQAVKLA---LDCTPLIGNV----IMSMYAQFNFIEEVVRVFRLIQDKD 263
+ G ++C+ +KLA D P V ++S Y + ++ +FRL+ KD
Sbjct: 234 SWNILIGGYVNCREMKLARTYFDAMPQKNGVSWITMISGYTKLGDVQSAEELFRLMSKKD 293
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECS-IRPDDFTFASILASCTWHASFLHGKQI 322
+ ++ +I ++ + F +M+ S I+PD+ T +S++++ + + G +
Sbjct: 294 KLVYDAMIACYTQNGKPKDALKLFAQMLERNSYIQPDEITLSSVVSANSQLGNTSFGTWV 353
Query: 323 HAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLG 382
+++ D + +L+++Y K G A K+FS ++ ++ +S++ MI G +G+
Sbjct: 354 ESYITEHGIKIDDLLSTSLIDLYMKGGDFAKAFKMFSNLNKKDTVSYSAMIMGCGINGMA 413
Query: 383 ERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSC 442
A +F M + + P+ VTFTGLL A +HSG+V++G FNSM+ + + P+ H+
Sbjct: 414 TEANSLFTAMIEKKIPPNVVTFTGLLSAYSHSGLVQEGYKCFNSMK-DHNLEPSADHYGI 472
Query: 443 LIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVT 502
++DMLGRAGRL E E I + V G+LL A +H N+ GE +++
Sbjct: 473 MVDMLGRAGRLEEAYELIKSMPMQPNAGVWGALLLASGLHNNVEFGEIACSHCVKLETDP 532
Query: 503 TSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
T L+ +Y+S G W++ + R +K L K G +W++
Sbjct: 533 TGYLSHLAMIYSSVGRWDDARTVRDSIKEKKLCKTLGCSWVE 574
>AT1G03510.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:876258-877547 REVERSE
LENGTH=429
Length = 429
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 117/425 (27%), Positives = 202/425 (47%), Gaps = 38/425 (8%)
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
S YA+S T +S +S + E+ +F L + F + V L +
Sbjct: 3 SSYASSC-TKLISLTKQLSSYANQGNHEQALNLF-LQMHSSFALPLDAHVFSLALKSCAA 60
Query: 213 DFRT--GMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
FR G S+H +VK P +G ++ MY + + ++F I ++ + WN +
Sbjct: 61 AFRPVLGGSVHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAM 120
Query: 271 INAFSHF---------------------------------DDQGKSFLFFKEMMNECSIR 297
I+ ++H D ++ F+++M+ E +
Sbjct: 121 ISHYTHCGKVKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMI-EFRFK 179
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
P+ T +++++C+ +F K+IH++ FR + + LV Y +CGSI Y V
Sbjct: 180 PNLITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLV 239
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
F M R++++W+++I+A+ HG E A++ F++M+ V PD + F +L AC+H+G+
Sbjct: 240 FDSMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLA 299
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
+ +YF M+ YG+ + H+SCL+D+L R GR E + I G+LL
Sbjct: 300 DEALVYFKRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLG 359
Query: 478 ACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
ACR +G + + E A+ LL V P + YVLL +Y S G E R +K SG++
Sbjct: 360 ACRNYGEIELAEIAARELLMVEPENPANYVLLGKIYMSVGRQEEAERLRLKMKESGVKVS 419
Query: 538 PGYAW 542
PG +W
Sbjct: 420 PGSSW 424
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 175/386 (45%), Gaps = 51/386 (13%)
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQMK---VLP-NEFVFASTLSACASLRALVQGQQIHG 121
+S + +S Y G H AL+LF QM LP + VF+ L +CA+ V G +H
Sbjct: 13 ISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHA 72
Query: 122 LSLRSGYASISFVS-------------------------------NSLITMYMKCGQCSD 150
S++S + S FV N++I+ Y CG+ +
Sbjct: 73 HSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKVKE 132
Query: 151 ALSVY-ANSVGTNSVSYNALISGFVENHEPE-KGFEVFKLMLQEGFVPDRFSFVGLLGFS 208
A+ +Y A V N S+NA+I G V + + E ++ M++ F P+ + + L+
Sbjct: 133 AVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALVSAC 192
Query: 209 TNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWN 268
+ + FR +H A + ++ P + + ++ Y + I V VF ++D+DV++W+
Sbjct: 193 SAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVVAWS 252
Query: 269 TLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR 328
+LI+A++ D + F+E M + PDD F ++L +C+ HA G A ++
Sbjct: 253 SLISAYALHGDAESALKTFQE-MELAKVTPDDIAFLNVLKACS-HA----GLADEALVYF 306
Query: 329 TRQYWDVGV------HNALVNMYAKCGSIGYAHKVFSKMSYRNLI-SWNTMIAAFGNHGL 381
R D G+ ++ LV++ ++ G A+KV M + +W ++ A N+G
Sbjct: 307 KRMQGDYGLRASKDHYSCLVDVLSRVGRFEEAYKVIQAMPEKPTAKTWGALLGACRNYGE 366
Query: 382 GERA-IEIFEQMKAEGVKPDSVTFTG 406
E A I E + E P + G
Sbjct: 367 IELAEIAARELLMVEPENPANYVLLG 392
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 36/221 (16%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+HA +K S+ FV LL+MY KC V ARK+FD + +RN V W+AMIS Y CG+
Sbjct: 70 VHAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGK 129
Query: 81 HWMALHLFSQMKVLPN-----------------------------EFVFASTL------- 104
A+ L+ M V+PN EF F L
Sbjct: 130 VKEAVELYEAMDVMPNESSFNAIIKGLVGTEDGSYRAIEFYRKMIEFRFKPNLITLLALV 189
Query: 105 SACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSV 164
SAC+++ A ++IH + R+ + + L+ Y +CG V+ + + V
Sbjct: 190 SACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFDSMEDRDVV 249
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
++++LIS + + + E + F+ M PD +F+ +L
Sbjct: 250 AWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVL 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 68/130 (52%), Gaps = 11/130 (8%)
Query: 3 LETIGTLLQRCSKTMTFGL----HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
L T+ L+ CS F L H+ + ++ H + + L+ Y +CG +V + VFD
Sbjct: 182 LITLLALVSACSAIGAFRLIKEIHSYAFRNLIEPHPQLKSGLVEAYGRCGSIVYVQLVFD 241
Query: 59 GMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACA----SLR 111
M +R+ V+WS++IS Y G+ AL F +M KV P++ F + L AC+ +
Sbjct: 242 SMEDRDVVAWSSLISAYALHGDAESALKTFQEMELAKVTPDDIAFLNVLKACSHAGLADE 301
Query: 112 ALVQGQQIHG 121
ALV +++ G
Sbjct: 302 ALVYFKRMQG 311
>AT1G74400.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:27963953-27965341 FORWARD
LENGTH=462
Length = 462
Score = 189 bits (480), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 112/400 (28%), Positives = 209/400 (52%), Gaps = 25/400 (6%)
Query: 161 TNSVSYNALISGFVENHEPEKGFEVFKLMLQEG--FVPDRFSFVGLLGFST-----NLDD 213
T S+ N + ++E+ EP K F+ ++ FV D FS + + S+ +LD
Sbjct: 26 TKSLKSNHTLKQYLESGEPIKALLDFRHRFRQSPSFV-DSFSVLFAIKVSSAQKASSLD- 83
Query: 214 FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK-DVISWNTLIN 272
G +H KL + I ++ Y+ ++ +VF +K +++ W +I+
Sbjct: 84 ---GRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMIS 140
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
A++ ++ ++ FK M E I D L++C + G++I++ + ++
Sbjct: 141 AYTENENSVEAIELFKRMEAE-KIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRR 199
Query: 333 --WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFE 390
D+ + N+L+NMY K G A K+F + +++ ++ +MI + +G + ++E+F+
Sbjct: 200 LAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFK 259
Query: 391 QMKAEG------VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLI 444
+MK + P+ VTF G+L+AC+HSG+V +G +F SM Y + P HF C++
Sbjct: 260 KMKTIDQSQDTVITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMV 319
Query: 445 DMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTS 504
D+ R+G L + E+IN+ + V+ +LL AC +HGN+ +GE + + + E+
Sbjct: 320 DLFCRSGHLKDAHEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDHVG 379
Query: 505 PYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEPGYAWLK 544
YV LSN+YAS GMW+E + R ++ R+ PG +W++
Sbjct: 380 DYVALSNIYASKGMWDEKSKMRDRVRK---RRMPGKSWIE 416
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 169/377 (44%), Gaps = 65/377 (17%)
Query: 11 QRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER-NTVSWS 69
Q+ S +HA V K+G + + + L+ Y G V AR+VFD E+ N V W+
Sbjct: 77 QKASSLDGRQIHALVRKLGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWT 136
Query: 70 AMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRS 126
AMIS Y + A+ LF +M K+ + + LSACA L A+ G++I+ S++
Sbjct: 137 AMISAYTENENSVEAIELFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKR 196
Query: 127 G--YASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
A + NSL+ MY+K G+ A ++ S+ + +Y ++I G+ N + ++ E
Sbjct: 197 KRRLAMDLTLRNSLLNMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLE 256
Query: 185 VFKLML-----QEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+FK M Q+ + P+ +F+G+L + C
Sbjct: 257 LFKKMKTIDQSQDTVITPNDVTFIGVL--------------MAC---------------- 286
Query: 239 IMSMYAQFNFIEEVVRVFR-LIQDKDV----ISWNTLINAF---SHFDDQGKSFLFFKEM 290
+ +EE R F+ +I D ++ + +++ F H D E
Sbjct: 287 -----SHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDA-------HEF 334
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFR-TRQYWDVGVHNALVNMYAKCG 349
+N+ I+P+ + ++L +C+ H + G+++ +F R + VG + AL N+YA G
Sbjct: 335 INQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFELDRDH--VGDYVALSNIYASKG 392
Query: 350 SIGYAHKVFSKMSYRNL 366
K+ ++ R +
Sbjct: 393 MWDEKSKMRDRVRKRRM 409
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 25/341 (7%)
Query: 72 ISGYDQCGEHWMAL----HLFSQMKVLPNEF--VFASTLSACASLRALVQGQQIHGLSLR 125
+ Y + GE AL H F Q + F +FA +S+ +L G+QIH L +
Sbjct: 35 LKQYLESGEPIKALLDFRHRFRQSPSFVDSFSVLFAIKVSSAQKASSL-DGRQIHALVRK 93
Query: 126 SGYASISFVSNSLITMYMKCGQCSDALSVYANSV-GTNSVSYNALISGFVENHEPEKGFE 184
G+ ++ + SL+ Y G A V+ + N V + A+IS + EN + E
Sbjct: 94 LGFNAVIQIQTSLVGFYSSVGDVDYARQVFDETPEKQNIVLWTAMISAYTENENSVEAIE 153
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVK----LALDCTPLIGNVIM 240
+FK M E D L +L + G ++ +++K LA+D T + N ++
Sbjct: 154 LFKRMEAEKIELDGVIVTVALSACADLGAVQMGEEIYSRSIKRKRRLAMDLT--LRNSLL 211
Query: 241 SMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMM-----NECS 295
+MY + E+ ++F KDV ++ ++I ++ +S FK+M +
Sbjct: 212 NMYVKSGETEKARKLFDESMRKDVTTYTSMIFGYALNGQAQESLELFKKMKTIDQSQDTV 271
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH-NALVNMYAKCGSIGYA 354
I P+D TF +L +C+ GK+ + H +V+++ + G + A
Sbjct: 272 ITPNDVTFIGVLMACSHSGLVEEGKRHFKSMIMDYNLKPREAHFGCMVDLFCRSGHLKDA 331
Query: 355 HKVFSKMSYR-NLISWNTMIAAFGNHG---LGERAI-EIFE 390
H+ ++M + N + W T++ A HG LGE IFE
Sbjct: 332 HEFINQMPIKPNTVIWRTLLGACSLHGNVELGEEVQRRIFE 372
>AT3G18970.1 | Symbols: MEF20 | mitochondrial editing factor 20 |
chr3:6543699-6545117 REVERSE LENGTH=472
Length = 472
Score = 188 bits (478), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 121/425 (28%), Positives = 199/425 (46%), Gaps = 48/425 (11%)
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
L +KC + D++ ++AN +S+ Y L E
Sbjct: 77 LFNTLLKCSKPEDSIRIFANYASKSSLLY-----------------------LNE----R 109
Query: 198 RFSFV-GLLGFSTNLDDFRTGMSLHCQAVKLA-LDCTPLIGNVIMSMYAQFNFIEEVVRV 255
F FV G S + R G +H KL L + LIG ++ YA+ + +V
Sbjct: 110 TFVFVLGACARSASSSALRVGRIVHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKV 169
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQG-----KSFLFFKEMMNEC---SIRPDDFTFASIL 307
F + ++ ++WN +I + D+G K+ + F+ C +RP D T +L
Sbjct: 170 FDEMPERTSVTWNAMIGGYCSHKDKGNHNARKAMVLFRRF--SCCGSGVRPTDTTMVCVL 227
Query: 308 ASCTWHASFLHGKQIHAFLFRT--RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRN 365
++ + G +H ++ + DV + ALV+MY+KCG + A VF M +N
Sbjct: 228 SAISQTGLLEIGSLVHGYIEKLGFTPEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKN 287
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
+ +W +M +G G + +M G+KP+ +TFT LL A H G+V +G F
Sbjct: 288 VFTWTSMATGLALNGRGNETPNLLNRMAESGIKPNEITFTSLLSAYRHIGLVEEGIELFK 347
Query: 426 SMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNM 485
SM+ +G+ P I H+ C++D+LG+AGR+ E ++I D ++L SL +AC ++G
Sbjct: 348 SMKTRFGVTPVIEHYGCIVDLLGKAGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGET 407
Query: 486 AIGERLAKLLLEVPP-------VTTSPYVLLSNLYASDGMWNEVTSARKMLKGSGLRKEP 538
+GE + K LLE+ YV LSN+ A G W EV RK +K ++ P
Sbjct: 408 VMGEEIGKALLEIEREDEKLSGSECEDYVALSNVLAHKGKWVEVEKLRKEMKERRIKTRP 467
Query: 539 GYAWL 543
GY+++
Sbjct: 468 GYSFV 472
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 124/275 (45%), Gaps = 17/275 (6%)
Query: 21 LHAAVLKIG-LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGY---D 76
+H V K+G L + LL+ Y K G + ARKVFD M ER +V+W+AMI GY
Sbjct: 133 VHGMVKKLGFLYESELIGTTLLHFYAKNGDLRYARKVFDEMPERTSVTWNAMIGGYCSHK 192
Query: 77 QCGEH--WMALHLFSQMK-----VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYA 129
G H A+ LF + V P + LSA + L G +HG + G+
Sbjct: 193 DKGNHNARKAMVLFRRFSCCGSGVRPTDTTMVCVLSAISQTGLLEIGSLVHGYIEKLGFT 252
Query: 130 S--ISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFK 187
F+ +L+ MY KCG ++A SV+ N ++ ++ +G N + +
Sbjct: 253 PEVDVFIGTALVDMYSKCGCLNNAFSVFELMKVKNVFTWTSMATGLALNGRGNETPNLLN 312
Query: 188 LMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN--VIMSMYAQ 245
M + G P+ +F LL ++ G+ L +++K TP+I + I+ + +
Sbjct: 313 RMAESGIKPNEITFTSLLSAYRHIGLVEEGIELF-KSMKTRFGVTPVIEHYGCIVDLLGK 371
Query: 246 FNFIEEVVR-VFRLIQDKDVISWNTLINAFSHFDD 279
I+E + + + D I +L NA S + +
Sbjct: 372 AGRIQEAYQFILAMPIKPDAILLRSLCNACSIYGE 406
>AT1G09220.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:2977952-2979466 REVERSE
LENGTH=504
Length = 504
Score = 185 bits (470), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 172/313 (54%), Gaps = 4/313 (1%)
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
P+ NV+++ E+ + + ++ V+SW T+I+ ++ D ++ L F M+
Sbjct: 189 PVTWNVMITGLTNLGDFEKALCFLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVA 248
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFL-FRTRQYWDVGVHNALVNMYAKCGSI 351
+I+P++ T +IL + +HA++ R D+ V N+L++ YAKCG I
Sbjct: 249 CDAIKPNEITILAILPAVWNLGDLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCI 308
Query: 352 GYAHKVFSKMS--YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
A K F ++ +NL+SW TMI+AF HG+G+ A+ +F+ M+ G+KP+ VT +L
Sbjct: 309 QSAFKFFIEIPNGRKNLVSWTTMISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLN 368
Query: 410 ACNHSGMVRKGDL-YFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND 468
AC+H G+ + L +FN+M Y I P++ H+ CL+DML R GRL E E+ +
Sbjct: 369 ACSHGGLAEEEFLEFFNTMVNEYKITPDVKHYGCLVDMLRRKGRLEEAEKIALEIPIEEK 428
Query: 469 PVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKM 528
VV LL AC V+ + + ER+ + L+E+ YVL+SN++ G + + RK
Sbjct: 429 AVVWRMLLGACSVYDDAELAERVTRKLMELERSHGGDYVLMSNIFCGTGRFLDAQRFRKQ 488
Query: 529 LKGSGLRKEPGYA 541
+ G+ K PG++
Sbjct: 489 MDVRGVAKLPGHS 501
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 125/296 (42%), Gaps = 45/296 (15%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE------ 80
K+G +SHV+V L+ MY+ G ++ A KVFD M ERN V+W+ MI+G G+
Sbjct: 151 KLGFESHVYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALC 210
Query: 81 -----------HWM--------------ALHLFSQM----KVLPNEFVFASTLSACASLR 111
W A+ LFS+M + PNE + L A +L
Sbjct: 211 FLEKMPNRTVVSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLG 270
Query: 112 ALVQGQQIHGLSLRSGYASISF-VSNSLITMYMKCGQCSDALSVYANSVG--TNSVSYNA 168
L +H + G+ V+NSLI Y KCG A + N VS+
Sbjct: 271 DLKMCGSVHAYVGKRGFVPCDIRVTNSLIDAYAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 169 LISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN----LDDFRTGMSLHCQA 224
+IS F + ++ +FK M + G P+R + + +L ++ ++F +
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLKPNRVTMISVLNACSHGGLAEEEFLEFFNTMVNE 390
Query: 225 VKLALDCTPLIGNVIMSMYAQFNFIEEVVRV-FRLIQDKDVISWNTLINAFSHFDD 279
K+ D ++ M + +EE ++ + ++ + W L+ A S +DD
Sbjct: 391 YKITPDVKHY--GCLVDMLRRKGRLEEAEKIALEIPIEEKAVVWRMLLGACSVYDD 444
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 13/207 (6%)
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKA 394
V V ALV MY G++ AHKVF +M RN ++WN MI N G E+A+ E+M
Sbjct: 158 VYVQTALVGMYLVGGNMIDAHKVFDEMPERNPVTWNVMITGLTNLGDFEKALCFLEKMPN 217
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
V V++T ++ ++ L F+ M A I PN ++ + G L
Sbjct: 218 RTV----VSWTTIIDGYARVDKPKEAILLFSRMVACDAIKPNEITILAILPAVWNLGDLK 273
Query: 455 ---EVEEYINKFHHLN-DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTTS--PYVL 508
V Y+ K + D V SL+ A + + K +E+P + +
Sbjct: 274 MCGSVHAYVGKRGFVPCDIRVTNSLIDA---YAKCGCIQSAFKFFIEIPNGRKNLVSWTT 330
Query: 509 LSNLYASDGMWNEVTSARKMLKGSGLR 535
+ + +A GM E S K ++ GL+
Sbjct: 331 MISAFAIHGMGKEAVSMFKDMERLGLK 357
>AT1G14470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4954080-4955702 FORWARD
LENGTH=540
Length = 540
Score = 174 bits (440), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/467 (26%), Positives = 217/467 (46%), Gaps = 84/467 (17%)
Query: 19 FGL--HAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYD 76
FG+ A V K+G +V N +++MYVK V ARKVFD +S+R W+ MISGY
Sbjct: 119 FGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMISGYW 178
Query: 77 QCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
+ G A LF M P V + T+
Sbjct: 179 KWGNKEEACKLFDMM---PENDVVSWTV-------------------------------- 203
Query: 137 SLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+IT + K +A + + VS+NA++SG+ +N E +F ML+ G P
Sbjct: 204 -MITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFNDMLRLGVRP 262
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL------ALDC---TPLIG----------- 236
+ ++V ++ + FR SL VKL L+C T L+
Sbjct: 263 NETTWVIVISACS----FRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSA 318
Query: 237 ----------------NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQ 280
N ++S Y + + ++F + ++V+SWN+LI ++H
Sbjct: 319 RRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQA 378
Query: 281 GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA 340
+ FF++M++ +PD+ T S+L++C A G I ++ + + + + +
Sbjct: 379 ALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRS 438
Query: 341 LVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
L+ MYA+ G++ A +VF +M R+++S+NT+ AF +G G + + +MK EG++PD
Sbjct: 439 LIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPD 498
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDML 447
VT+T +L ACN +G++++G F S+ P H++C+ D+L
Sbjct: 499 RVTYTSVLTACNRAGLLKEGQRIFKSIR-----NPLADHYACM-DLL 539
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/511 (20%), Positives = 191/511 (37%), Gaps = 116/511 (22%)
Query: 53 ARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACAS 109
R +FD ++ N ++M + + L L+ Q ++P+ F F + +
Sbjct: 59 TRLIFDSVTFPNVFVVNSMFKYFSKMDMANDVLRLYEQRSRCGIMPDAFSFPVVIKSAGR 118
Query: 110 LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNAL 169
L Q L + G+ +V N ++ MY+K A V+ +N +
Sbjct: 119 FGILFQA-----LVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVM 173
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
ISG+ + E+ ++F +M + V
Sbjct: 174 ISGYWKWGNKEEACKLFDMMPENDVVS--------------------------------- 200
Query: 230 DCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKE 289
V+++ +A+ +E + F + +K V+SWN +++ ++ + F +
Sbjct: 201 ------WTVMITGFAKVKDLENARKYFDRMPEKSVVSWNAMLSGYAQNGFTEDALRLFND 254
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC- 348
M+ +RP++ T+ ++++C++ A + + + R + V AL++M+AKC
Sbjct: 255 ML-RLGVRPNETTWVIVISACSFRADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCR 313
Query: 349 -------------------------------GSIGYAHKVFSKMSYRNLISWNTMIAAFG 377
G + A ++F M RN++SWN++IA +
Sbjct: 314 DIQSARRIFNELGTQRNLVTWNAMISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYA 373
Query: 378 NHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
++G AIE FE M G KPD VT +L AC H + GD + + I N
Sbjct: 374 HNGQAALAIEFFEDMIDYGDSKPDEVTMISVLSACGHMADLELGDCIVDYIRKN-QIKLN 432
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLN----------------------------- 467
+ LI M R G L E + ++ +
Sbjct: 433 DSGYRSLIFMYARGGNLWEAKRVFDEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKD 492
Query: 468 -----DPVVLGSLLSACRVHGNMAIGERLAK 493
D V S+L+AC G + G+R+ K
Sbjct: 493 EGIEPDRVTYTSVLTACNRAGLLKEGQRIFK 523
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 36/230 (15%)
Query: 12 RCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKC------------------------ 47
R ++T L + + ++ + FV LL+M+ KC
Sbjct: 277 RADPSLTRSLVKLIDEKRVRLNCFVKTALLDMHAKCRDIQSARRIFNELGTQRNLVTWNA 336
Query: 48 --------GRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM----KVLP 95
G + AR++FD M +RN VSW+++I+GY G+ +A+ F M P
Sbjct: 337 MISGYTRIGDMSSARQLFDTMPKRNVVSWNSLIAGYAHNGQAALAIEFFEDMIDYGDSKP 396
Query: 96 NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY 155
+E S LSAC + L G I ++ SLI MY + G +A V+
Sbjct: 397 DEVTMISVLSACGHMADLELGDCIVDYIRKNQIKLNDSGYRSLIFMYARGGNLWEAKRVF 456
Query: 156 ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
+ VSYN L + F N + + + M EG PDR ++ +L
Sbjct: 457 DEMKERDVVSYNTLFTAFAANGDGVETLNLLSKMKDEGIEPDRVTYTSVL 506
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 102/252 (40%), Gaps = 30/252 (11%)
Query: 255 VFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHA 314
+F + +V N++ FS D L E + C I PD F+F ++ S
Sbjct: 62 IFDSVTFPNVFVVNSMFKYFSKMD-MANDVLRLYEQRSRCGIMPDAFSFPVVIKSAG--- 117
Query: 315 SFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIA 374
G A + + + D V N +++MY K S+ A KVF ++S R WN MI+
Sbjct: 118 --RFGILFQALVEKLGFFKDPYVRNVIMDMYVKHESVESARKVFDQISQRKGSDWNVMIS 175
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIA 434
+ G E A ++F+ M V +V TG + RK YF+ M ++
Sbjct: 176 GYWKWGNKEEACKLFDMMPENDVVSWTVMITGFAKVKDLEN-ARK---YFDRMPEKSVVS 231
Query: 435 PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGS---------LLSACRVHGNM 485
N ML + E+ + F ND + LG ++SAC +
Sbjct: 232 WNA--------MLSGYAQNGFTEDALRLF---NDMLRLGVRPNETTWVIVISACSFRADP 280
Query: 486 AIGERLAKLLLE 497
++ L KL+ E
Sbjct: 281 SLTRSLVKLIDE 292
>AT3G26630.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:9791572-9792939 REVERSE
LENGTH=455
Length = 455
Score = 150 bits (378), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 109/402 (27%), Positives = 190/402 (47%), Gaps = 45/402 (11%)
Query: 104 LSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNS 163
L C++ L +QIH ++ + + LI++ G+ A V+ ++
Sbjct: 27 LRTCSNFSQL---KQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPST 83
Query: 164 VSYNALISGFVENHEPEKGFEVFKLML---QEGFVPDRFSFVGLLGFSTNLDDFRTGMSL 220
++N +I NH+P + +F LM+ Q F D+F+F ++ R G +
Sbjct: 84 FTWNLMIRSLSVNHKPREALLLFILMMISHQSQF--DKFTFPFVIKACLASSSIRLGTQV 141
Query: 221 HCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNT----------- 269
H A+K N +M +Y + + +VF + + ++SW T
Sbjct: 142 HGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQL 201
Query: 270 --------------------LINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
+I A+ ++F F+ M + ++P++FT ++L +
Sbjct: 202 DSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVD-DVKPNEFTIVNLLQA 260
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
T S G+ +H + + D + AL++MY+KCGS+ A KVF M ++L +W
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEG-VKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
N+MI + G HG GE A+ +FE+M+ E V+PD++TF G+L AC ++G V+ G YF M
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN-DP 469
YGI+P H +C+I +L +A EVE+ N ++ DP
Sbjct: 381 QVYGISPIREHNACMIQLLEQA---LEVEKASNLVESMDSDP 419
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 154/327 (47%), Gaps = 39/327 (11%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H ++K L + + QL+++ G A VF+ + +T +W+ MI +
Sbjct: 39 IHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIRSLSVNHK 98
Query: 81 HWMALHLFSQMKVLP----NEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSN 136
AL LF M + ++F F + AC + ++ G Q+HGL++++G+ + F N
Sbjct: 99 PREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQN 158
Query: 137 SLITMYMKCGQCSDALSVYANSVG-------------------------------TNSVS 165
+L+ +Y KCG+ V+ G N VS
Sbjct: 159 TLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVS 218
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+ A+I+ +V+N P++ F++F+ M + P+ F+ V LL ST L G +H A
Sbjct: 219 WTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGRWVHDYAH 278
Query: 226 K--LALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKS 283
K LDC +G ++ MY++ +++ +VF ++Q K + +WN++I + ++
Sbjct: 279 KNGFVLDC--FLGTALIDMYSKCGSLQDARKVFDVMQGKSLATWNSMITSLGVHGCGEEA 336
Query: 284 FLFFKEMMNECSIRPDDFTFASILASC 310
F+EM E S+ PD TF +L++C
Sbjct: 337 LSLFEEMEEEASVEPDAITFVGVLSAC 363
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 35/242 (14%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS------------------- 61
+H +K G + VF N L+++Y KCG+ RKVFD M
Sbjct: 141 VHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQ 200
Query: 62 ------------ERNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSA 106
RN VSW+AMI+ Y + A LF +M+V PNEF + L A
Sbjct: 201 LDSAEIVFNQMPMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQA 260
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSY 166
L +L G+ +H + ++G+ F+ +LI MY KCG DA V+ G + ++
Sbjct: 261 STQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQGKSLATW 320
Query: 167 NALISGFVENHEPEKGFEVFKLMLQEGFV-PDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
N++I+ + E+ +F+ M +E V PD +FVG+L N + + G+ + +
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEEEASVEPDAITFVGVLSACANTGNVKDGLRYFTRMI 380
Query: 226 KL 227
++
Sbjct: 381 QV 382
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 121/302 (40%), Gaps = 33/302 (10%)
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
+F +H + +K L L+ ++S+ + F + VF +Q +WN +I
Sbjct: 32 NFSQLKQIHTKIIKHNLTNDQLLVRQLISVSSSFGETQYASLVFNQLQSPSTFTWNLMIR 91
Query: 273 AFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
+ S ++ L F MM + D FTF ++ +C +S G Q+H + +
Sbjct: 92 SLSVNHKPREALLLFILMMISHQSQFDKFTFPFVIKACLASSSIRLGTQVHGLAIKAGFF 151
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSK-------------------------------M 361
DV N L+++Y KCG KVF K M
Sbjct: 152 NDVFFQNTLMDLYFKCGKPDSGRKVFDKMPGRSIVSWTTMLYGLVSNSQLDSAEIVFNQM 211
Query: 362 SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
RN++SW MI A+ + + A ++F +M+ + VKP+ T LL A G + G
Sbjct: 212 PMRNVVSWTAMITAYVKNRRPDEAFQLFRRMQVDDVKPNEFTIVNLLQASTQLGSLSMGR 271
Query: 422 LYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRV 481
+ + G + + LIDM + G L + + + S++++ V
Sbjct: 272 -WVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVMQG-KSLATWNSMITSLGV 329
Query: 482 HG 483
HG
Sbjct: 330 HG 331
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 69/136 (50%), Gaps = 19/136 (13%)
Query: 5 TIGTLLQRCSK----TMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM 60
TI LLQ ++ +M +H K G F+ L++MY KCG + ARKVFD M
Sbjct: 253 TIVNLLQASTQLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFDVM 312
Query: 61 SERNTVSWSAMIS--GYDQCGEHWMALHLFSQM----KVLPNEFVFASTLSACAS----- 109
++ +W++MI+ G CGE AL LF +M V P+ F LSACA+
Sbjct: 313 QGKSLATWNSMITSLGVHGCGEE--ALSLFEEMEEEASVEPDAITFVGVLSACANTGNVK 370
Query: 110 --LRALVQGQQIHGLS 123
LR + Q++G+S
Sbjct: 371 DGLRYFTRMIQVYGIS 386
>AT2G15690.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:6831855-6833594 REVERSE
LENGTH=579
Length = 579
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 127/233 (54%)
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
PD F + SC S H K++H +++ D ++N +++M+ +C SI A +V
Sbjct: 234 PDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRV 293
Query: 358 FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
F M +++ SW+ M+ A+ ++G+G+ A+ +FE+M G+KP+ TF + +AC G +
Sbjct: 294 FDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGI 353
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
+ L+F+SM+ +GI+P H+ ++ +LG+ G L E E+YI ++ +
Sbjct: 354 EEAFLHFDSMKNEHGISPKTEHYLGVLGVLGKCGHLVEAEQYIRDLPFEPTADFWEAMRN 413
Query: 478 ACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKMLK 530
R+HG++ + + + +L+++V P + + S N VTS ++L+
Sbjct: 414 YARLHGDIDLEDYMEELMVDVDPSKAVINKIPTPPPKSFKETNMVTSKSRILE 466
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 15/192 (7%)
Query: 189 MLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
+L +G +PDR FV L NL +H ++ P + N+++SM+ + +
Sbjct: 227 LLDKGAMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSS 286
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
I + RVF + DKD+ SW+ ++ A+S + G L E M + ++P++ TF ++
Sbjct: 287 ITDAKRVFDHMVDKDMDSWHLMMCAYSD-NGMGDDALHLFEEMTKHGLKPNEETFLTVFL 345
Query: 309 SCTW----HASFLH---GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
+C +FLH K H +T Y V + + KCG + A + +
Sbjct: 346 ACATVGGIEEAFLHFDSMKNEHGISPKTEHYLGV------LGVLGKCGHLVEAEQYIRDL 399
Query: 362 SYRNLIS-WNTM 372
+ W M
Sbjct: 400 PFEPTADFWEAM 411
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 10/118 (8%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
+H L+ + ++N +++M+ +C + A++VFD M +++ SW M+ Y G
Sbjct: 258 VHDHFLQSKFRGDPKLNNMVISMFGECSSITDAKRVFDHMVDKDMDSWHLMMCAYSDNGM 317
Query: 81 HWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQG-------QQIHGLSLRSGY 128
ALHLF +M + PNE F + ACA++ + + + HG+S ++ +
Sbjct: 318 GDDALHLFEEMTKHGLKPNEETFLTVFLACATVGGIEEAFLHFDSMKNEHGISPKTEH 375
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/110 (21%), Positives = 58/110 (52%)
Query: 93 VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDAL 152
+P+ F +CA+L++L +++H L+S + ++N +I+M+ +C +DA
Sbjct: 232 AMPDRECFVLLFESCANLKSLEHSKKVHDHFLQSKFRGDPKLNNMVISMFGECSSITDAK 291
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
V+ + V + S++ ++ + +N + +F+ M + G P+ +F+
Sbjct: 292 RVFDHMVDKDMDSWHLMMCAYSDNGMGDDALHLFEEMTKHGLKPNEETFL 341
>AT2G25580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:10888102-10889949 FORWARD
LENGTH=615
Length = 615
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 101/192 (52%)
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
C K +H + + + D+ ++ L+ MY+ CG A VF KMS +NL +W
Sbjct: 264 CGEAEGLQEAKTVHGKISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLETW 323
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
+I F +G GE AI++F + K EG PD F G+ AC G V +G L+F SM
Sbjct: 324 CIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGLLHFESMSR 383
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
YGIAP+I + L++M G L E E++ + + V +L++ RVHGN+ +G+
Sbjct: 384 DYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMNLSRVHGNLELGD 443
Query: 490 RLAKLLLEVPPV 501
A+++ + P
Sbjct: 444 YCAEVVEFLDPT 455
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNS-LITMYMKCGQCSDALSVYANSVGTNSVS 165
C L + + +HG + + + + SN L+ MY CG ++A SV+ N +
Sbjct: 264 CGEAEGLQEAKTVHG-KISASVSHLDLSSNHVLLEMYSNCGLANEAASVFEKMSEKNLET 322
Query: 166 YNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAV 225
+ +I F +N E ++F +EG +PD F G+ L D G+ LH +++
Sbjct: 323 WCIIIRCFAKNGFGEDAIDMFSRFKEEGNIPDGQLFRGIFYACGMLGDVDEGL-LHFESM 381
Query: 226 KLALDCTPLIGNVI--MSMYAQFNFIEEVVR-VFRLIQDKDVISWNTLIN 272
P I + + + MYA F++E + V R+ + +V W TL+N
Sbjct: 382 SRDYGIAPSIEDYVSLVEMYALPGFLDEALEFVERMPMEPNVDVWETLMN 431
>AT4G32450.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr4:15661092-15662705 FORWARD
LENGTH=537
Length = 537
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
C + K +H F+ + D+ +N+++ MY+ CGS+ A VF+ M RNL +W
Sbjct: 191 CGDAQALQEAKVVHEFITSSVGISDISAYNSIIEMYSGCGSVEDALTVFNSMPERNLETW 250
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
+I F +G GE AI+ F + K EG KPD F + AC G + +G L+F SM
Sbjct: 251 CGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLGDMNEGLLHFESMYK 310
Query: 430 AYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGE 489
YGI P + H+ L+ ML G L E ++ D + +L++ RVHG++ +G+
Sbjct: 311 EYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESMEPNVD--LWETLMNLSRVHGDLILGD 368
Query: 490 RLAKLLLEV 498
R ++ ++
Sbjct: 369 RCQDMVEQL 377
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 9/182 (4%)
Query: 94 LPNEFVFASTLSACASLRALVQGQQIHGLSLRS-GYASISFVSNSLITMYMKCGQCSDAL 152
LP F A C +AL + + +H S G + IS NS+I MY CG DAL
Sbjct: 181 LPRLFWIAQL---CGDAQALQEAKVVHEFITSSVGISDIS-AYNSIIEMYSGCGSVEDAL 236
Query: 153 SVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
+V+ + N ++ +I F +N + E + F QEG PD F + L
Sbjct: 237 TVFNSMPERNLETWCGVIRCFAKNGQGEDAIDTFSRFKQEGNKPDGEMFKEIFFACGVLG 296
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVI--MSMYAQFNFIEEVVRVFRLIQDKDVISWNTL 270
D G+ LH +++ P + + + + M A+ +++E +R ++ +V W TL
Sbjct: 297 DMNEGL-LHFESMYKEYGIIPCMEHYVSLVKMLAEPGYLDEALRFVESME-PNVDLWETL 354
Query: 271 IN 272
+N
Sbjct: 355 MN 356
>AT1G31840.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=840
Length = 840
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/482 (23%), Positives = 219/482 (45%), Gaps = 36/482 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYD 76
L + VL G +V L+N + K G + A +F M +R + +++S +I GY
Sbjct: 273 LLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYF 332
Query: 77 QCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
+ G M LFSQ V + VF+ST+ L ++ L G +
Sbjct: 333 KAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVV 392
Query: 134 VSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
LI + G+ +A +Y + + V+Y++LI GF + GF +++ M
Sbjct: 393 TYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDM 452
Query: 190 LQEGFVPDRFSFVGLL-GFSTN---LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQ 245
++ G+ PD + L+ G S L R + + Q+++L + ++ N ++ + +
Sbjct: 453 IKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNV----VVFNSLIDGWCR 508
Query: 246 FNFIEEVVRVFRLIQ----DKDVISWNTLIN-AFSHFDDQGKSFLFFKEMMNECSIRPDD 300
N +E ++VFRL+ DV ++ T++ + + FLFF+ M + + PD
Sbjct: 509 LNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFR--MFKMGLEPDA 566
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+ +++ + H G Q+ + R + D+ V N ++++ KC I A K F+
Sbjct: 567 LAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 361 M----SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL-IACNHSG 415
+ +++++NTMI + + + A IFE +K P++VT T L+ + C ++
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNND 686
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSL 475
M G + S+ A G PN + CL+D ++ ++E F + + + S+
Sbjct: 687 M--DGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKS---VDIEGSFKLFEEMQEKGISPSI 741
Query: 476 LS 477
+S
Sbjct: 742 VS 743
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/466 (20%), Positives = 204/466 (43%), Gaps = 37/466 (7%)
Query: 17 MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCG-----RVVLARKVFDGMSERNTVSWSAM 71
M L + L G++ V V + +++YVK G VV R + G+S N V+++ +
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-NVVTYTIL 397
Query: 72 ISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA---CASLRALVQGQQIHGLSLR 125
I G Q G + A ++ Q+ + P+ ++S + C +LR+ G ++ ++
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIK 454
Query: 126 SGYASISFVSNSLITMYMKCGQCSDAL----SVYANSVGTNSVSYNALISGFVENHEPEK 181
GY + L+ K G A+ + S+ N V +N+LI G+ + ++
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
+VF+LM G PD +F ++ S + L + K+ L+ L ++
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLID 574
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHF-------DDQGKSFLFFKEMMNEC 294
+ + +++F L+Q + + + N H +D K FF ++ E
Sbjct: 575 AFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASK---FFNNLI-EG 630
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
+ PD T+ +++ ++I L T + L+++ K + A
Sbjct: 631 KMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGA 690
Query: 355 HKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
++FS M+ + N +++ ++ F E + ++FE+M+ +G+ P V+++ ++
Sbjct: 691 IRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDG 750
Query: 411 CNHSGMVRKG-DLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
G V + +++ +++A + P++ ++ LI + GRL E
Sbjct: 751 LCKRGRVDEATNIFHQAIDAK--LLPDVVAYAILIRGYCKVGRLVE 794
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 34/326 (10%)
Query: 134 VSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEG 193
V++ L+++ + CG N V++ LI+GF + E ++ F++FK+M Q G
Sbjct: 269 VASRLLSLVLDCGP------------APNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRG 316
Query: 194 FVPDRFSFVGLLGFSTNLDD-FRTGM-----SLHCQAVKLALDCTPLIGNVIMSMYAQFN 247
PD L+ +ST +D F+ GM L QA+ + ++ + + +Y +
Sbjct: 317 IEPD------LIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSG 370
Query: 248 FIEEVVRVFR--LIQ--DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTF 303
+ V++ L Q +V+++ LI ++F + +++ + P T+
Sbjct: 371 DLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKR-GMEPSIVTY 429
Query: 304 ASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM-- 361
+S++ + G ++ + + DV ++ LV+ +K G + +A + KM
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489
Query: 362 -SYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRK 419
S R N++ +N++I + + A+++F M G+KPD TFT ++ G + +
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549
Query: 420 GDLYFNSMEAAYGIAPNIGHFSCLID 445
F M G+ P+ + LID
Sbjct: 550 ALFLFFRM-FKMGLEPDALAYCTLID 574
>AT1G29710.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:10387673-10389100 FORWARD
LENGTH=475
Length = 475
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 91/162 (56%)
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK 393
DVG NA++ MY+ C S+ A KVF +M N + M+ F N+G GE AI++F + K
Sbjct: 153 DVGARNAIIEMYSGCCSVDDALKVFEEMPEWNSGTLCVMMRCFVNNGYGEEAIDLFTRFK 212
Query: 394 AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
EG KP+ F + C +G V++G L F +M YGI P++ H+ + ML +G L
Sbjct: 213 EEGNKPNGEIFNQVFSTCTLTGDVKEGSLQFQAMYREYGIVPSMEHYHSVTKMLATSGHL 272
Query: 454 SEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
E ++ + V +L++ RVHG++ +G+R A+L+
Sbjct: 273 DEALNFVERMPMEPSVDVWETLMNLSRVHGDVELGDRCAELV 314
>AT4G19440.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 203/493 (41%), Gaps = 56/493 (11%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMA 84
G+ V++ +N + K G+V A K+F M E N V+++ +I G CG + A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 85 LHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
+M + P ++ + + + + + G+ V N+LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 142 YMKCGQCSDALSV----YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
+++ G + A+ + + + S +YN LI G+ +N + + + K ML GF +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 198 RFSFVGLL----------------------------GFSTNLDDFRTGMSLHCQAVKL-- 227
+ SF ++ G T L H +A++L
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 228 -----ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFD 278
N ++ + ++E R+ + I + D +S+NTLI+
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
++F+F EM+ ++PD++T++ ++ Q R DV +
Sbjct: 555 KLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKA 394
+ +++ K + F +M +N+ + +N +I A+ G A+E+ E MK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
+G+ P+S T+T L+ + V + L F M G+ PN+ H++ LID G+ G++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMV 732
Query: 455 EVEEYINKFHHLN 467
+VE + + H N
Sbjct: 733 KVECLLREMHSKN 745
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 172/434 (39%), Gaps = 59/434 (13%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHW 82
K G +V V N L++ +++ G + A ++ D M + + +++ +I GY + G+
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 83 MALHLFSQMKVLP---NEFVFASTLSACAS-------------------------LRALV 114
A L +M + N+ F S + S L L+
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 115 QGQQIHGLS----------LRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT--- 161
G HG L G+ + SN+L+ + G+ +A + +G
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 162 -NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSL 220
+ VSYN LISG + ++ F M++ G PD +++ L+ N++ +
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 221 --HCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDV----ISWNTLINAF 274
C+ + D +V++ + EE F + K+V + +N LI A+
Sbjct: 598 WDDCKRNGMLPDVYTY--SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 275 SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD 334
+ L +E M I P+ T+ S++ + + K + + +
Sbjct: 656 CRSGRLSMA-LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFE 390
V + AL++ Y K G + + +M +N+ I++ MI + G A +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 391 QMKAEGVKPDSVTF 404
+M+ +G+ PDS+T+
Sbjct: 775 EMREKGIVPDSITY 788
>AT4G19440.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr4:10602006-10604483 REVERSE
LENGTH=825
Length = 825
Score = 112 bits (279), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 104/493 (21%), Positives = 203/493 (41%), Gaps = 56/493 (11%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMA 84
G+ V++ +N + K G+V A K+F M E N V+++ +I G CG + A
Sbjct: 255 GVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEA 314
Query: 85 LHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
+M + P ++ + + + + + G+ V N+LI
Sbjct: 315 FMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDS 374
Query: 142 YMKCGQCSDALSV----YANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
+++ G + A+ + + + S +YN LI G+ +N + + + K ML GF +
Sbjct: 375 FIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVN 434
Query: 198 RFSFVGLL----------------------------GFSTNLDDFRTGMSLHCQAVKL-- 227
+ SF ++ G T L H +A++L
Sbjct: 435 QGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWF 494
Query: 228 -----ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFD 278
N ++ + ++E R+ + I + D +S+NTLI+
Sbjct: 495 QFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKK 554
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
++F+F EM+ ++PD++T++ ++ Q R DV +
Sbjct: 555 KLDEAFMFLDEMVKR-GLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTY 613
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKA 394
+ +++ K + F +M +N+ + +N +I A+ G A+E+ E MK
Sbjct: 614 SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKH 673
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
+G+ P+S T+T L+ + V + L F M G+ PN+ H++ LID G+ G++
Sbjct: 674 KGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRME-GLEPNVFHYTALIDGYGKLGQMV 732
Query: 455 EVEEYINKFHHLN 467
+VE + + H N
Sbjct: 733 KVECLLREMHSKN 745
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/434 (20%), Positives = 172/434 (39%), Gaps = 59/434 (13%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHW 82
K G +V V N L++ +++ G + A ++ D M + + +++ +I GY + G+
Sbjct: 358 KKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQAD 417
Query: 83 MALHLFSQMKVLP---NEFVFASTLSACAS-------------------------LRALV 114
A L +M + N+ F S + S L L+
Sbjct: 418 NAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLI 477
Query: 115 QGQQIHGLS----------LRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT--- 161
G HG L G+ + SN+L+ + G+ +A + +G
Sbjct: 478 SGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCV 537
Query: 162 -NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSL 220
+ VSYN LISG + ++ F M++ G PD +++ L+ N++ +
Sbjct: 538 MDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQF 597
Query: 221 --HCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDV----ISWNTLINAF 274
C+ + D +V++ + EE F + K+V + +N LI A+
Sbjct: 598 WDDCKRNGMLPDVYTY--SVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655
Query: 275 SHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWD 334
+ L +E M I P+ T+ S++ + + K + + +
Sbjct: 656 CRSGRLSMA-LELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPN 714
Query: 335 VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFE 390
V + AL++ Y K G + + +M +N+ I++ MI + G A +
Sbjct: 715 VFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLN 774
Query: 391 QMKAEGVKPDSVTF 404
+M+ +G+ PDS+T+
Sbjct: 775 EMREKGIVPDSITY 788
>AT3G53700.1 | Symbols: MEE40 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:19900303-19902567 FORWARD
LENGTH=754
Length = 754
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 104/477 (21%), Positives = 205/477 (42%), Gaps = 34/477 (7%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS----ERNTVSWSAMISGYDQCGEHW 82
+ GL+ N++LN+ V + L MS + + +++ +I + +
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 83 MALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLI 139
A+ + M ++P+E F + + L +I + G + + N ++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 140 TMYMKCGQCSDALSVY---ANSVG--TNSVSYNALISGFVENHEPEKGFEVFKLMLQEGF 194
+ K G+ DAL+ +N G + ++N L++G + + E+ +MLQEG+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 195 VPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP--LIGNVIMSMYAQFNFIEEV 252
PD +++ ++ L + + + + Q + DC+P + N ++S + N +EE
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMI--TRDCSPNTVTYNTLISTLCKENQVEEA 384
Query: 253 VRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+ R++ K DV ++N+LI + + F+EM ++ PD+FT+ ++
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSK-GCEPDEFTYNMLID 443
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSY----R 364
S + + + V +N L++ + K A ++F +M R
Sbjct: 444 SLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSR 503
Query: 365 NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYF 424
N +++NT+I E A ++ +QM EG KPD T+ LL G ++K
Sbjct: 504 NSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIV 563
Query: 425 NSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEY--------INKFHHLNDPVVLG 473
+M + G P+I + LI L +AGR+ + IN H +PV+ G
Sbjct: 564 QAM-TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQG 619
>AT1G31840.2 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11424006-11426528 FORWARD
LENGTH=811
Length = 811
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/471 (22%), Positives = 209/471 (44%), Gaps = 46/471 (9%)
Query: 32 SHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM 91
+ V+++LL++ + CG N V++ +I+G+ + GE A LF M
Sbjct: 265 DQIEVASRLLSLVLDCG------------PAPNVVTFCTLINGFCKRGEMDRAFDLFKVM 312
Query: 92 K---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQC 148
+ + P+ +++ + L G ++ +L G V +S I +Y+K G
Sbjct: 313 EQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDL 372
Query: 149 SDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGL 204
+ A VY + N V+Y LI G ++ + F ++ +L+ G P ++ L
Sbjct: 373 ATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSL 432
Query: 205 LGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVR--VFRLIQDK 262
+ + R+G +L+ +K+ +I V++ ++ + +R V L Q
Sbjct: 433 IDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSI 492
Query: 263 --DVISWNTLINA---FSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
+V+ +N+LI+ + FD+ K F +M I+PD TF +++ +F
Sbjct: 493 RLNVVVFNSLIDGWCRLNRFDEALKVF----RLMGIYGIKPDVATFTTVMRVSIMEDAFC 548
Query: 318 H------GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM----SYRNLI 367
G Q+ + R + D+ V N ++++ KC I A K F+ + +++
Sbjct: 549 KHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIV 608
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL-IACNHSGMVRKGDLYFNS 426
++NTMI + + + A IFE +K P++VT T L+ + C ++ M G + S
Sbjct: 609 TYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDM--DGAIRMFS 666
Query: 427 MEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLS 477
+ A G PN + CL+D ++ ++E F + + + S++S
Sbjct: 667 IMAEKGSKPNAVTYGCLMDWFSKS---VDIEGSFKLFEEMQEKGISPSIVS 714
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 103/470 (21%), Positives = 203/470 (43%), Gaps = 49/470 (10%)
Query: 17 MTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCG-----RVVLARKVFDGMSERNTVSWSAM 71
M L + L G++ V V + +++YVK G VV R + G+S N V+++ +
Sbjct: 339 MGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISP-NVVTYTIL 397
Query: 72 ISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA---CASLRALVQGQQIHGLSLR 125
I G Q G + A ++ Q+ + P+ ++S + C +LR+ G ++ ++
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRS---GFALYEDMIK 454
Query: 126 SGYASISFVSNSLITMYMKCGQCSDAL----SVYANSVGTNSVSYNALISGFVENHEPEK 181
GY + L+ K G A+ + S+ N V +N+LI G+ + ++
Sbjct: 455 MGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDE 514
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDF------RTGMSLH--CQAVKLALDCTP 233
+VF+LM G PD +F ++ S D F G+ L Q K++ D
Sbjct: 515 ALKVFRLMGIYGIKPDVATFTTVMRVSIMEDAFCKHMKPTIGLQLFDLMQRNKISADIA- 573
Query: 234 LIGNVIMSMYAQFNFIEEVVRVFR-LIQDK---DVISWNTLINAFSHFDDQGKSFLFFKE 289
+ NV++ + + + IE+ + F LI+ K D++++NT+I + ++ F E
Sbjct: 574 -VCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIF-E 631
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
++ P+ T ++ + ++ + + + + L++ ++K
Sbjct: 632 LLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSV 691
Query: 350 SIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
I + K+F +M + +++S++ +I G + A IF Q + PD V +
Sbjct: 692 DIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYA 751
Query: 406 GLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
L+ G + + L + M G+ P+ D+L RA LSE
Sbjct: 752 ILIRGYCKVGRLVEAALLYEHM-LRNGVKPD--------DLLQRA--LSE 790
>AT1G63130.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23412854-23414746 FORWARD
LENGTH=630
Length = 630
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 93/423 (21%), Positives = 196/423 (46%), Gaps = 31/423 (7%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM----SERNTVSWSAMISGYD 76
L ++++G Q F N L++ + R A + D M + + V++ +++G
Sbjct: 173 LVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLC 232
Query: 77 QCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
+ G+ +AL L +M K+ P ++ + + A + + + + G
Sbjct: 233 KRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVV 292
Query: 134 VSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
NSLI G+ SDA + ++ + N V+++ALI FV+ + + +++ M
Sbjct: 293 TYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 190 LQEGFVPDRFSFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTP--LIGNVIMSMYAQF 246
++ PD F++ L+ GF + R + H + ++ DC P + N ++ + +
Sbjct: 353 IKRSIDPDIFTYSSLINGFCMH---DRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 247 NFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFT 302
++E + +FR + + + +++ TLI+ F + + + FK+M+++ + PD T
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSD-GVLPDIMT 468
Query: 303 FASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
++ +L + + +L R++ D+ +N ++ K G + +F +S
Sbjct: 469 YSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 528
Query: 363 YR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVR 418
+ N++++ TM++ F GL E A +F +MK EG PDS T+ L+ A +R
Sbjct: 529 LKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRA-----HLR 583
Query: 419 KGD 421
GD
Sbjct: 584 DGD 586
>AT3G23020.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr3:8177215-8179743 REVERSE
LENGTH=842
Length = 842
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 178/400 (44%), Gaps = 38/400 (9%)
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV---------GLLGFSTNLD 212
+S +YN +I + ++ + ++ E FK ML+EG VP +F G LG T+L
Sbjct: 297 SSYTYNTMIDTYGKSGQIKEASETFKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSL- 355
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWN 268
+T M LHC A D N+++S++ + N IE F+ ++D D +S+
Sbjct: 356 -MKT-MKLHC-----APDTRTY--NILISLHTKNNDIERAGAYFKEMKDDGLKPDPVSYR 406
Query: 269 TLINAFS--HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
TL+ AFS H ++ + + M++ ++ D++T S L A L
Sbjct: 407 TLLYAFSIRHMVEEAEGLI---AEMDDDNVEIDEYT-QSALTRMYVEAEMLEKSWSWFKR 462
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF---SKMSYRNLISWNTMIAAFGNHGLGE 383
F ++A ++ Y + G + A +VF +++ R +I +N MI A+G E
Sbjct: 463 FHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCE 522
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL 443
+A E+FE M + GV PD T+ L+ + M KG Y M G + + +
Sbjct: 523 KACELFESMMSYGVTPDKCTYNTLVQILASADMPHKGRCYLEKMRET-GYVSDCIPYCAV 581
Query: 444 IDMLGRAGRLSEVEEYINKFHHLN---DPVVLGSLLSACRVHGNMAIGERLAKLLLEVP- 499
I + G+L+ EE + N D VV G L++A GN+ + + E
Sbjct: 582 ISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGVLINAFADTGNVQQAMSYVEAMKEAGI 641
Query: 500 PVTTSPYVLLSNLYASDGMWNEVTSA-RKMLKGSGLRKEP 538
P + Y L LY G +E + RK+L+ + P
Sbjct: 642 PGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSCNKTQYP 681
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 122/592 (20%), Positives = 231/592 (39%), Gaps = 88/592 (14%)
Query: 5 TIGTLLQRCSKTMTFGLHA-----AVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDG 59
T GTL+ SK +HA + KIG+Q + +L MY K A + F
Sbjct: 224 TYGTLIDVYSKG-GLKVHALCWLGKMSKIGMQPDEVTTGIVLQMYKKAREFQKAEEFFK- 281
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQI 119
WS C E+ H V + + + + + + + +
Sbjct: 282 -------KWS--------CDENKADSH------VCLSSYTYNTMIDTYGKSGQIKEASET 320
Query: 120 HGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN---SVGTNSVSYNALISGFVEN 176
L G + N++I +Y GQ + S+ ++ +YN LIS +N
Sbjct: 321 FKRMLEEGIVPTTVTFNTMIHIYGNNGQLGEVTSLMKTMKLHCAPDTRTYNILISLHTKN 380
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLL-------------GFSTNLDDFRTGMSLHCQ 223
++ E+ FK M +G PD S+ LL G +DD + + Q
Sbjct: 381 NDIERAGAYFKEMKDDGLKPDPVSYRTLLYAFSIRHMVEEAEGLIAEMDDDNVEIDEYTQ 440
Query: 224 A--VKLALDCTPL------------IGNVI-------MSMYAQFNFIEEVVRVFRLIQD- 261
+ ++ ++ L GN+ + Y + ++ E RVF Q+
Sbjct: 441 SALTRMYVEAEMLEKSWSWFKRFHVAGNMSSEGYSANIDAYGERGYLSEAERVFICCQEV 500
Query: 262 --KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFAS---ILASCTWHASF 316
+ VI +N +I A+ K+ F+ MM+ + PD T+ + ILAS A
Sbjct: 501 NKRTVIEYNVMIKAYGISKSCEKACELFESMMS-YGVTPDKCTYNTLVQILAS----ADM 555
Query: 317 LHGKQIHAFLFRTRQYW-DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNT 371
H + + R Y D + A+++ + K G + A +V+ +M N+ + +
Sbjct: 556 PHKGRCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYGV 615
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAY 431
+I AF + G ++A+ E MK G+ +SV + L+ G + + + + + +
Sbjct: 616 LINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLQSC 675
Query: 432 GIA--PNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND--PVVLGSLLSACRVHGNMAI 487
P++ +C+I++ + + E + + +L + +G
Sbjct: 676 NKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMKQRGEANEFTFAMMLCMYKKNGRFEE 735
Query: 488 GERLAKLLLEVPPVTTSP--YVLLSNLYASDGMWNEVTSARKMLKGSGLRKE 537
++AK + E+ + T P Y + L+A DG + E K + SG++ +
Sbjct: 736 ATQIAKQMREMK-ILTDPLSYNSVLGLFALDGRFKEAVETFKEMVSSGIQPD 786
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 133/336 (39%), Gaps = 61/336 (18%)
Query: 139 ITMYMKCGQCSDALSVYANSVGTNS---VSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
I Y + G S+A V+ N + YN +I + + EK E+F+ M+ G
Sbjct: 478 IDAYGERGYLSEAERVFICCQEVNKRTVIEYNVMIKAYGISKSCEKACELFESMMSYGVT 537
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL-----ALDCTPLIGNVIMSMY--AQFNF 248
PD+ ++ L+ + D G C K+ DC P VI S Q N
Sbjct: 538 PDKCTYNTLVQILASADMPHKG---RCYLEKMRETGYVSDCIPYCA-VISSFVKLGQLNM 593
Query: 249 IEEVVR-VFRLIQDKDVISWNTLINAFSHFDDQG--KSFLFFKEMMNECSIRPDDFTFAS 305
EEV + + + DV+ + LINAF+ D G + + + E M E I + + S
Sbjct: 594 AEEVYKEMVEYNIEPDVVVYGVLINAFA---DTGNVQQAMSYVEAMKEAGIPGNSVIYNS 650
Query: 306 ILASCTWHASFLHGKQIHAFLFRT---RQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
++ T + I+ L ++ QY DV N ++N+Y++ + A +F M
Sbjct: 651 LIKLYTKVGYLDEAEAIYRKLLQSCNKTQYPDVYTSNCMINLYSERSMVRKAEAIFDSMK 710
Query: 363 YR--------------------------------------NLISWNTMIAAFGNHGLGER 384
R + +S+N+++ F G +
Sbjct: 711 QRGEANEFTFAMMLCMYKKNGRFEEATQIAKQMREMKILTDPLSYNSVLGLFALDGRFKE 770
Query: 385 AIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
A+E F++M + G++PD TF L GM +K
Sbjct: 771 AVETFKEMVSSGIQPDDSTFKSLGTILMKLGMSKKA 806
>AT2G34370.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr2:14510482-14511891 FORWARD
LENGTH=469
Length = 469
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%)
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMK 393
D ++ ++ MY+ C S A VF++M RN +W TMI +G GERAI++F +
Sbjct: 142 DARSYHTVIEMYSGCRSTDDALNVFNEMPKRNSETWGTMIRCLAKNGEGERAIDMFTRFI 201
Query: 394 AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
EG KPD F + AC G + +G L+F SM YG+ ++ + +I+ML G L
Sbjct: 202 EEGNKPDKEIFKAVFFACVSIGDINEGLLHFESMYRDYGMVLSMEDYVNVIEMLAACGHL 261
Query: 454 SEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLL 495
E +++ + + +L++ C V G + +G+R A+L+
Sbjct: 262 DEALDFVERMTVEPSVEMWETLMNLCWVQGYLELGDRFAELI 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 18/174 (10%)
Query: 107 CASLRALVQGQQIHG----LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTN 162
C + AL + + +H L RS + ++I MY C DAL+V+ N
Sbjct: 122 CGEVEALEEARVVHDCITPLDARSYH--------TVIEMYSGCRSTDDALNVFNEMPKRN 173
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHC 222
S ++ +I +N E E+ ++F ++EG PD+ F + ++ D G+ LH
Sbjct: 174 SETWGTMIRCLAKNGEGERAIDMFTRFIEEGNKPDKEIFKAVFFACVSIGDINEGL-LHF 232
Query: 223 QAV----KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLIN 272
+++ + L + NVI + A + E + V R+ + V W TL+N
Sbjct: 233 ESMYRDYGMVLSMEDYV-NVIEMLAACGHLDEALDFVERMTVEPSVEMWETLMN 285
>AT1G63080.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23388884-23390728 REVERSE
LENGTH=614
Length = 614
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 186/392 (47%), Gaps = 31/392 (7%)
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA 106
V L ++ + + V++ A+I+G + GE +AL+L ++M K+ + ++++ + +
Sbjct: 190 VALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDS 249
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----SVGTN 162
R + + G F +SLI+ G+ SDA + ++ + N
Sbjct: 250 LCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPN 309
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFS--TNLDDFRTGMS 219
V++N+LI F + + + ++F M+Q P+ ++ L+ GF LD+ + +
Sbjct: 310 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 369
Query: 220 LHCQAVKLALDCTP--LIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINA 273
L ++ DC P + N +++ + + + + + +FR + + + +++ TLI+
Sbjct: 370 LM-----VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHG 424
Query: 274 FSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW 333
F D + + FK+M+++ + P+ T+ ++L + + +L +++
Sbjct: 425 FFQASDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEP 483
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIF 389
D+ +N + K G + +F +S + ++I++NTMI+ F GL E A +F
Sbjct: 484 DIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLF 543
Query: 390 EQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
+MK +G PDS T+ L+ A +R GD
Sbjct: 544 IKMKEDGPLPDSGTYNTLIRA-----HLRDGD 570
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 99/503 (19%), Positives = 204/503 (40%), Gaps = 45/503 (8%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I L +R + + ++K+G + N LLN + R+ A + D M E
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 63 -RNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHG 121
+TV+++ ++ G Q + A+ L +M V C + G I+G
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVV-----------KGCQP-DLVTYGAVING 214
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
L R G ++ N L M + + V Y+ +I + +
Sbjct: 215 LCKR-GEPDLAL--NLLNKME-------------KGKIEADVVIYSTVIDSLCKYRHVDD 258
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
+F M +G PD F++ L+ N + L ++ ++ + N ++
Sbjct: 259 ALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLID 318
Query: 242 MYAQFNFIEEVVRVF-RLIQ---DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR 297
+A+ + E ++F +IQ D +++++N+LIN F D ++ F M+++ +
Sbjct: 319 AFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCL- 377
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
PD T+ +++ + G ++ + R + + L++ + + A V
Sbjct: 378 PDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMV 437
Query: 358 FSKMS----YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
F +M + N++++NT++ +G E+A+ +FE ++ ++PD T+ +
Sbjct: 438 FKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCK 497
Query: 414 SGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHH---LNDPV 470
+G V G F S+ + G+ P++ ++ +I + G E K L D
Sbjct: 498 AGKVEDGWDLFCSL-SLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556
Query: 471 VLGSLLSACRVHGNMAIGERLAK 493
+L+ A G+ A L K
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIK 579
>AT1G63400.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23507320-23509053 FORWARD
LENGTH=577
Length = 577
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 174/372 (46%), Gaps = 22/372 (5%)
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA 106
V L ++ + N V++ +++G + G+ +A +L ++M K+ N ++++ + +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDS 269
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----SVGTN 162
R + G +SLI+ + SDA + ++ + N
Sbjct: 270 LCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPN 329
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLDDFRTGMSLH 221
V++NALI FV+ + + +++ M++ PD F++ L+ GF + R + H
Sbjct: 330 VVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH---DRLDEAKH 386
Query: 222 CQAVKLALDCTP--LIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFS 275
+ ++ DC P + N +++ + + I+E V +FR + + + +++ TLI+ F
Sbjct: 387 MFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFF 446
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
D + + FK+M+++ + P+ T+ ++L + + +L R++ +
Sbjct: 447 QARDCDNAQMVFKQMVSD-GVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 505
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQ 391
+N ++ K G + +F +S + ++I +NTMI+ F GL E A +F +
Sbjct: 506 YTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRK 565
Query: 392 MKAEGVKPDSVT 403
M+ +G PDS T
Sbjct: 566 MREDGPLPDSGT 577
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 187/461 (40%), Gaps = 75/461 (16%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I +R ++ L ++K+G + + + LLN Y R+ A + D M E
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 63 -RNTVSWSAMISG---YDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQ 118
+T++++ +I G +++ E + Q PN + G
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY---------------GVV 231
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
++GL R I N L M A + N V Y+ +I +
Sbjct: 232 VNGLCKR---GDIDLAFNLLNKME-------------AAKIEANVVIYSTVIDSLCKYRH 275
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ +F M +G P+ ++ L+ N + + D + L+ ++
Sbjct: 276 EDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWS--------------DASRLLSDM 321
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
I E + + +V+++N LI+AF ++ + EM+ SI P
Sbjct: 322 I----------ERKI-------NPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKR-SIDP 363
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D FT++S++ H K + + + +V +N L+N + K I ++F
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423
Query: 359 SKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+MS R N +++ T+I F + A +F+QM ++GV P+ +T+ LL +
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 483
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
G + K + F ++ + + P I ++ +I+ + +AG++ +
Sbjct: 484 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVED 523
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/379 (21%), Positives = 166/379 (43%), Gaps = 33/379 (8%)
Query: 145 CGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGL 204
CG C + + + S Y ++ + + + + +F M++ +P F F L
Sbjct: 37 CGMC-----YWGRAFSSGSGDYREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKL 91
Query: 205 LGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV----RVFRLIQ 260
L + F +SL + +L + N++++ + + + I + ++ +L
Sbjct: 92 LSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGY 151
Query: 261 DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGK 320
+ +++ ++L+N + H + +M+ E RPD TF +++ H FLH K
Sbjct: 152 EPSIVTLSSLLNGYCHGKRISDAVALVDQMV-EMGYRPDTITFTTLI-----HGLFLHNK 205
Query: 321 QIHAFLFRTRQYW-----DVGVHNALVNMYAKCGSIGYAHKVFSKMS----YRNLISWNT 371
A R ++ + +VN K G I A + +KM N++ ++T
Sbjct: 206 ASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYST 265
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL-IACNHSGMVRKGDLYFNSMEAA 430
+I + + + A+ +F +M+ +GV+P+ +T++ L+ CN+ L + +E
Sbjct: 266 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK 325
Query: 431 YGIAPNIGHFSCLIDMLGRAGRLSEVEE-YINKFHHLNDPVVL--GSLLSACRVHGNMAI 487
I PN+ F+ LID + G+L E E+ Y DP + SL++ +H +
Sbjct: 326 --INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDE 383
Query: 488 GERLAKLLLE---VPPVTT 503
+ + +L++ P V T
Sbjct: 384 AKHMFELMISKDCFPNVVT 402
>AT1G62930.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23306534-23308423 FORWARD
LENGTH=629
Length = 629
Score = 99.0 bits (245), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/373 (21%), Positives = 172/373 (46%), Gaps = 27/373 (7%)
Query: 67 SWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLS 123
++ +++G + G+ +AL L +M K+ + ++ + + A + + + +
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 124 LRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEP 179
G NSLI G+ SDA + ++ + N V+++ALI FV+ +
Sbjct: 282 DNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKL 341
Query: 180 EKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTP--LIG 236
+ +++ M++ PD F++ L+ GF + R + H + ++ DC P +
Sbjct: 342 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMH---DRLDEAKHMFELMISKDCFPNVVTY 398
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
N ++ + + +EE + +FR + + + +++NTLI D + FK+M++
Sbjct: 399 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
+ + PD T++ +L + + +L +++ D+ +N ++ K G +
Sbjct: 459 D-GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 353 YAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
+F +S + N+I + TMI+ F GL E A +F +MK +G P+S T+ L+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 409 IACNHSGMVRKGD 421
A +R GD
Sbjct: 578 RA-----RLRDGD 585
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/359 (20%), Positives = 165/359 (45%), Gaps = 17/359 (4%)
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV----YANSVGTNSVSYNALISGFV 174
+ G ++ GY +SL+ Y + S+A+++ + N+V++N LI G
Sbjct: 137 VLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLF 196
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
+++ + + M+ G PD F++ ++ D +SL + K ++ +
Sbjct: 197 LHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVV 256
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEM 290
I I+ + + + + +F + +K +V+++N+LI ++ + +M
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDM 316
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
+ E I P+ TF++++ + + ++++ + + D+ +++L+N +
Sbjct: 317 I-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 351 IGYAHKVF----SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTG 406
+ A +F SK + N++++NT+I F E +E+F +M G+ ++VT+
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 407 LLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE---VEEYINK 462
L+ +G F M + G+ P+I +S L+D L + G+L + V EY+ K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKM-VSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQK 493
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 11/184 (5%)
Query: 33 HVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLF 88
+V N L+ + K RV ++F MS+R NTV+++ +I G Q G+ MA +F
Sbjct: 394 NVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 89 SQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKC 145
+M V P+ ++ L L + + +S + N +I K
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 146 GQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSF 201
G+ D ++ + V N + Y +ISGF E+ +F+ M ++G +P+ ++
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 202 VGLL 205
L+
Sbjct: 574 NTLI 577
>AT5G04810.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:1390049-1393760 FORWARD LENGTH=952
Length = 952
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 149/341 (43%), Gaps = 24/341 (7%)
Query: 127 GYASISFVSNSLITMYMKCGQCSDALSV----YANSVGTNSVSYNALISGFVENHEPEKG 182
G+ LI +Y K G+ S AL V V N +Y+ +I+GFV+ +
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 183 FEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
F VF+ M++EG PD + ++ + + + + KL T I+
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHG 598
Query: 243 YAQFNFIEEVVRVFRLIQD----KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
YA+ + + VF +++ V ++N LIN K+ EM +
Sbjct: 599 YAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEM-TLAGVSA 657
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTR---QYWDVGV--HNALVNMYAKCGSIGY 353
++ T+ I+ +AS G AF + TR + DV + + AL+ K G +
Sbjct: 658 NEHTYTKIMQG---YASV--GDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQS 712
Query: 354 AHKVFSKMSYRNLIS----WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
A V +MS RN+ +N +I + G A ++ +QMK EGVKPD T+T +
Sbjct: 713 ALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFIS 772
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
AC+ +G + + ME A G+ PNI ++ LI RA
Sbjct: 773 ACSKAGDMNRATQTIEEME-ALGVKPNIKTYTTLIKGWARA 812
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/460 (19%), Positives = 183/460 (39%), Gaps = 72/460 (15%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMA 84
G V L+N+Y K G++ A +V M E N ++S MI+G+ + + A
Sbjct: 479 GFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANA 538
Query: 85 LHLFSQM---KVLPNEFVFASTLSACASL----RALVQGQQIHGLSLRSGYASISFVSNS 137
+F M + P+ ++ + +SA + RA+ +++ L R + +F+
Sbjct: 539 FAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRP--TTRTFMP-- 594
Query: 138 LITMYMKCGQCSDALSVYANSVGTNSV----SYNALISGFVENHEPEKGFEVFKLMLQEG 193
+I Y K G +L V+ V ++N LI+G VE + EK E+ M G
Sbjct: 595 IIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAG 654
Query: 194 FVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVV 253
+ ++ ++ ++ D + LD ++ + ++ +
Sbjct: 655 VSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSAL 714
Query: 254 RVFRLIQDKDVIS----WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
V + + +++ +N LI+ ++ D ++ ++M E ++PD T+ S +++
Sbjct: 715 AVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKE-GVKPDIHTYTSFISA 773
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS----YRN 365
C+ K G + A + +M N
Sbjct: 774 CS-----------------------------------KAGDMNRATQTIEEMEALGVKPN 798
Query: 366 LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFN 425
+ ++ T+I + L E+A+ +E+MKA G+KPD + LL + + + +Y
Sbjct: 799 IKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRASIAEAYIYSG 858
Query: 426 SME-----AAYGIAPNIG---HFS-CLIDMLGRAGRLSEV 456
M G+ ++G H+S CL + G L+E
Sbjct: 859 VMTICKEMVEAGLIVDMGTAVHWSKCLCKIEASGGELTET 898
>AT1G62910.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23299060-23300958 FORWARD
LENGTH=632
Length = 632
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/473 (19%), Positives = 201/473 (42%), Gaps = 66/473 (13%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I +R ++ + A ++K+G + + + LLN Y R+ A + D M E
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 63 ------------------------------------RNTVSWSAMISGYDQCGEHWMALH 86
+ V++ +++G + G+ +AL
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALS 244
Query: 87 LFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYM 143
L +M K+ + ++ + + + + + G F +SLI+
Sbjct: 245 LLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLC 304
Query: 144 KCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
G+ SDA + ++ + N V+++ALI FV+ + + +++ M++ PD F
Sbjct: 305 NYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIF 364
Query: 200 SFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTP--LIGNVIMSMYAQFNFIEEVVRVF 256
++ L+ GF + R + H + ++ DC P + + ++ + + +EE + +F
Sbjct: 365 TYSSLINGFCMH---DRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421
Query: 257 RLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTW 312
R + + + +++ TLI+ F D + + FK+M++ + P+ T+ +L
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVS-VGVHPNILTYNILLDGLCK 480
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLIS 368
+ + +L R+ D+ +N ++ K G + ++F +S + N+I+
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
+NTMI+ F G E A + ++MK +G P+S T+ L+ A +R GD
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRA-----RLRDGD 588
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/443 (19%), Positives = 188/443 (42%), Gaps = 48/443 (10%)
Query: 28 IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS----ERNTVSWSAMISGYDQCGEHWM 83
+G+ ++ + +N + + ++ LA V M E + V+ S++++GY
Sbjct: 112 LGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISD 171
Query: 84 ALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
A+ L QM + P+ F F + + + + ++ G +++
Sbjct: 172 AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVN 231
Query: 141 MYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
K G ALS+ + + V YN +I G + + +F M +G P
Sbjct: 232 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRP 291
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVF 256
D F++ L+ S C + + D + L+ ++I E +
Sbjct: 292 DVFTYSSLI-------------SCLCNYGRWS-DASRLLSDMI----------ERKI--- 324
Query: 257 RLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASF 316
+ +V++++ LI+AF ++ + EM+ SI PD FT++S++ H
Sbjct: 325 ----NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR-SIDPDIFTYSSLINGFCMHDRL 379
Query: 317 LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTM 372
K + + + +V ++ L+ + K + ++F +MS R N +++ T+
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG 432
I F + A +F+QM + GV P+ +T+ LL +G + K + F ++ +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRS-T 498
Query: 433 IAPNIGHFSCLIDMLGRAGRLSE 455
+ P+I ++ +I+ + +AG++ +
Sbjct: 499 MEPDIYTYNIMIEGMCKAGKVED 521
>AT1G63150.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23419399-23421288 FORWARD
LENGTH=629
Length = 629
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/461 (20%), Positives = 198/461 (42%), Gaps = 62/461 (13%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I +R ++ + A ++K+G + + + LLN Y R+ A + D M E
Sbjct: 125 INCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGY 184
Query: 63 ------------------------------------RNTVSWSAMISGYDQCGEHWMALH 86
+ V++ +++G + G+ +AL+
Sbjct: 185 KPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALN 244
Query: 87 LFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYM 143
L ++M ++ N +F + + + R + + G NSLI
Sbjct: 245 LLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLC 304
Query: 144 KCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
G+ SDA + +N + N V++NALI F + + + ++ + M+Q PD
Sbjct: 305 NYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI 364
Query: 200 SFVGLL-GFS--TNLDDFRTGMSLHCQAVKLALDCTPLIG--NVIMSMYAQFNFIEEVVR 254
++ L+ GF LD+ + ++ DC P I N +++ + + +E+ V
Sbjct: 365 TYNLLINGFCMHNRLDEAKQMFKFM-----VSKDCLPNIQTYNTLINGFCKCKRVEDGVE 419
Query: 255 VFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+FR + + + +++ T+I F D + + FK+M++ + D T++ +L
Sbjct: 420 LFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN-RVPTDIMTYSILLHGL 478
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR-NLISW 369
+ I +L ++ ++ ++N ++ K G +G A +F +S + +++++
Sbjct: 479 CSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTY 538
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
NTMI+ + L + A ++F +MK +G P+S T+ L+ A
Sbjct: 539 NTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRA 579
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/462 (19%), Positives = 189/462 (40%), Gaps = 50/462 (10%)
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQMKVL--PNEFVFASTLSACASLRA-LVQGQQIHGL 122
V ++ ++S + + + + L QM+ L ++ S C R+ L +
Sbjct: 84 VEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAK 143
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV----GTNSVSYNALISGFVENHE 178
++ GY +SL+ Y + SDA+++ V ++ ++ LI G +++
Sbjct: 144 MMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNK 203
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ + M+Q G PD ++ ++ D ++L + + +I N
Sbjct: 204 ASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNT 263
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHF---DDQGKSF------- 284
I+ ++ +E V +F ++ K +V+++N+LIN ++ D +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK 323
Query: 285 -------------LFFKE-----------MMNECSIRPDDFTFASILASCTWHASFLHGK 320
FFKE M + SI PD T+ ++ H K
Sbjct: 324 INPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAK 383
Query: 321 QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAF 376
Q+ F+ ++ +N L+N + KC + ++F +MS R N +++ T+I F
Sbjct: 384 QMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGF 443
Query: 377 GNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPN 436
G + A +F+QM + V D +T++ LL G + + F ++ + + N
Sbjct: 444 FQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKS-EMELN 502
Query: 437 IGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSA 478
I ++ +I+ + +AG++ E + D V +++S
Sbjct: 503 IFIYNTMIEGMCKAGKVGEAWDLFCSLSIKPDVVTYNTMISG 544
>AT5G61990.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24900186-24903110 REVERSE
LENGTH=974
Length = 974
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 122/540 (22%), Positives = 224/540 (41%), Gaps = 81/540 (15%)
Query: 8 TLLQRCSKTMTFGLHAAVLK----IGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER 63
TL++ + FG VLK G+ +F N L+ K R+ AR M E
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516
Query: 64 ----NTVSWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQG 116
N ++ A ISGY + E A +M+ VLPN + L G
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPN--------------KVLCTG 562
Query: 117 QQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGT----NSVSYNALISG 172
LI Y K G+ +A S Y + V ++ +Y L++G
Sbjct: 563 ---------------------LINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601
Query: 173 FVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCT 232
+N + + E+F+ M +G PD FS+ L+ + L + + S+ + V+ L
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661
Query: 233 PLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFK 288
+I N+++ + + IE+ + + K + +++ T+I+ + D ++F F
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721
Query: 289 EMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYW---DVGVHNALVNMY 345
EM + + PD F + +++ C L+ + +F T + NAL+N
Sbjct: 722 EMKLK-GLVPDSFVYTTLVDGCCR----LNDVERAITIFGTNKKGCASSTAPFNALINWV 776
Query: 346 AKCGSIGYAHKV--------FSKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
K G +V F + N +++N MI G E A E+F QM+ +
Sbjct: 777 FKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANL 836
Query: 398 KPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA-AYGIAPNIGHFSCLIDMLGRAGRLSEV 456
P +T+T LL + G R+ +++ EA A GI P+ +S +I+ + G ++
Sbjct: 837 MPTVITYTSLLNGYDKMG--RRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKA 894
Query: 457 EEYINKF---HHLNDPVVLG-----SLLSACRVHGNMAIGERLAKLLLEVPPVTTSPYVL 508
+++ + ++D L +LLS G M + E++ + ++ + + S V+
Sbjct: 895 LVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVI 954
>AT5G41170.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr5:16478860-16480443 REVERSE
LENGTH=527
Length = 527
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 100/404 (24%), Positives = 178/404 (44%), Gaps = 48/404 (11%)
Query: 84 ALHLFSQM---KVLPNEFVFASTLSACASLRA------LVQGQQIHGLS--------LRS 126
AL LF+ M + LP+ F L+ A ++ L QI G+S L +
Sbjct: 56 ALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLMN 115
Query: 127 GY--ASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFE 184
+ +S ++++S + MK G D V++ +LI+GF + E+
Sbjct: 116 CFCQSSQPYLASSFLGKMMKLGFEPDI------------VTFTSLINGFCLGNRMEEAMS 163
Query: 185 VFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYA 244
+ M++ G PD + ++ +SL Q + ++ +++
Sbjct: 164 MVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLC 223
Query: 245 QFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNEC---SIR 297
+ + R + + DVI++N LI+AF +GK FL +E+ NE SI
Sbjct: 224 NSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVK---EGK-FLDAEELYNEMIRMSIA 279
Query: 298 PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKV 357
P+ FT+ S++ +Q+ + + DV + +L+N + KC + A K+
Sbjct: 280 PNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKI 339
Query: 358 FSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNH 413
F +MS + N I++ T+I FG G A E+F M + GV P+ T+ LL +
Sbjct: 340 FYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCY 399
Query: 414 SGMVRKGDLYFNSMEAAY--GIAPNIGHFSCLIDMLGRAGRLSE 455
+G V+K + F M+ G+APNI ++ L+ L G+L +
Sbjct: 400 NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEK 443
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/399 (19%), Positives = 168/399 (42%), Gaps = 27/399 (6%)
Query: 23 AAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE----RNTVSWSAMISGYDQC 78
++K+G + + L+N + R+ A + + M E + V ++ +I +
Sbjct: 131 GKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKN 190
Query: 79 GEHWMALHLFSQMK---VLPNEFVFASTLSA-CASLRALVQGQQIHGLSLRSGYASISFV 134
G AL LF QM+ + P+ ++ S ++ C S R + G++ R +
Sbjct: 191 GHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDV-IT 249
Query: 135 SNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
N+LI ++K G+ DA +Y S+ N +Y +LI+GF ++ ++F LM
Sbjct: 250 FNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLME 309
Query: 191 QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
+G PD ++ L+ M + + + L + ++ + Q
Sbjct: 310 TKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPN 369
Query: 251 EVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNE--CSIRPDDFTFA 304
VF + + ++ ++N L++ + K+ + F++M + P+ +T+
Sbjct: 370 VAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYN 429
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKC--GSIGYAHKVFSKMS 362
+L ++ K + F ++ D+G+ + + C G + A +F +
Sbjct: 430 VLLHGLCYNGKL--EKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLP 487
Query: 363 YR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGV 397
+ N++++ TMI+ GL A +F +MK +GV
Sbjct: 488 SKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 33/200 (16%)
Query: 263 DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQI 322
D+ + N L+N F + F +MM + PD TF S+ I
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMM-KLGFEPDIVTFTSL---------------I 149
Query: 323 HAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLG 382
+ F R + + N +V M K +++ + T+I + +G
Sbjct: 150 NGFCLGNRMEEAMSMVNQMVEMGIK----------------PDVVMYTTIIDSLCKNGHV 193
Query: 383 ERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSC 442
A+ +F+QM+ G++PD V +T L+ +SG R D M I P++ F+
Sbjct: 194 NYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGM-TKRKIKPDVITFNA 252
Query: 443 LIDMLGRAGRLSEVEEYINK 462
LID + G+ + EE N+
Sbjct: 253 LIDAFVKEGKFLDAEELYNE 272
>AT5G59900.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:24123983-24126706 REVERSE
LENGTH=907
Length = 907
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/496 (21%), Positives = 203/496 (40%), Gaps = 68/496 (13%)
Query: 27 KIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHW 82
KIGL+ + + L++M+ + G++ A M + + ++++I+G+ + G+
Sbjct: 395 KIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDIS 454
Query: 83 MALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLI 139
A ++M K+ P + S + S + + +++ G A + +L+
Sbjct: 455 AAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLL 514
Query: 140 TMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+ + G DA+ ++ +V N V+YN +I G+ E + K FE K M ++G V
Sbjct: 515 SGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIV 574
Query: 196 PDRFSFVGLL------GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
PD +S+ L+ G ++ F G LH +L C ++ + + +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDG--LHKGNCELNEICY----TGLLHGFCREGKL 628
Query: 250 EEVVRVFR-LIQ---DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFAS 305
EE + V + ++Q D D++ + LI+ D+ F KEM + ++PDD + S
Sbjct: 629 EEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR-GLKPDDVIYTS 687
Query: 306 ILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS--- 362
++ + + F I + + + A++N K G + A + SKM
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVS 747
Query: 363 ------------------------------------YRNLISWNTMIAAFGNHGLGERAI 386
N ++N +I F G E A
Sbjct: 748 SVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEAS 807
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDM 446
E+ +M +GV PD +T+T ++ V+K +NSM GI P+ ++ LI
Sbjct: 808 ELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSM-TEKGIRPDRVAYNTLIHG 866
Query: 447 LGRAGRLSEVEEYINK 462
AG + + E N+
Sbjct: 867 CCVAGEMGKATELRNE 882
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/439 (18%), Positives = 184/439 (41%), Gaps = 49/439 (11%)
Query: 40 LLNMYVKCGRVVLARKVFDGMSERNTV-----SWSAMISGYDQCGEHWMALHLFSQM--- 91
L+ YV+ RV+ VF M + ++ + SA++ G + +A+ LF+ M
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSV 221
Query: 92 KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDA 151
+ P+ +++ + + L+ L + +++ +M+ C
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEM--------------------IAHMEATGCD-- 259
Query: 152 LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNL 211
N V YN LI G + + + + K + + PD ++ L+ +
Sbjct: 260 ---------VNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKV 310
Query: 212 DDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD----KDVISW 267
+F G+ + + + L + + ++ + IEE + + + + D ++ +
Sbjct: 311 QEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370
Query: 268 NTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLF 327
N LI++ ++ L F + M + +RP+D T++ ++ +
Sbjct: 371 NALIDSLCKGRKFHEAELLF-DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 328 RTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGE 383
T V +N+L+N + K G I A ++M + L +++ +++ + + G
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 384 RAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL 443
+A+ ++ +M +G+ P TFT LL +G++R FN M A + + PN ++ +
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM-AEWNVKPNRVTYNVM 548
Query: 444 IDMLGRAGRLSEVEEYINK 462
I+ G +S+ E++ +
Sbjct: 549 IEGYCEEGDMSKAFEFLKE 567
>AT5G02860.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:654102-656561 FORWARD
LENGTH=819
Length = 819
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/404 (21%), Positives = 167/404 (41%), Gaps = 60/404 (14%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMA 84
G V+ L++ + GR A VF M E ++++ +++ + + G W
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 85 L-HLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
+ L +MK + P+ + + + ++ C + Q+ +G++ N+L+
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLD 322
Query: 141 MYMKCGQCSDALSVYA----NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+Y K + +A+ V N + V+YN+LIS + + ++ E+ M ++G P
Sbjct: 323 VYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKP 382
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG--NVIMSMYAQFNFIEEVVR 254
D F++ LL + MS+ + C P I N + MY E+++
Sbjct: 383 DVFTYTTLLSGFERAGKVESAMSIFEEMRNAG--CKPNICTFNAFIKMYGNRGKFTEMMK 440
Query: 255 VFRLIQ----DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+F I D+++WNTL+ F + FKEM P+ TF
Sbjct: 441 IFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEM-KRAGFVPERETF------- 492
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM----SYRNL 366
N L++ Y++CGS A V+ +M +L
Sbjct: 493 ----------------------------NTLISAYSRCGSFEQAMTVYRRMLDAGVTPDL 524
Query: 367 ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
++NT++AA G+ E++ ++ +M+ KP+ +T+ LL A
Sbjct: 525 STYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHA 568
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 106/226 (46%), Gaps = 9/226 (3%)
Query: 239 IMSMYAQFNFIEEVVRVFRLIQD----KDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
++S +A E V VF+ +++ +I++N ++N F E M
Sbjct: 214 LISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSD 273
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
I PD +T+ +++ C + Q+ + +D +NAL+++Y K A
Sbjct: 274 GIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEA 333
Query: 355 HKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
KV ++M +++++N++I+A+ G+ + A+E+ QM +G KPD T+T LL
Sbjct: 334 MKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSG 393
Query: 411 CNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV 456
+G V F M A G PNI F+ I M G G+ +E+
Sbjct: 394 FERAGKVESAMSIFEEMRNA-GCKPNICTFNAFIKMYGNRGKFTEM 438
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 158/354 (44%), Gaps = 29/354 (8%)
Query: 127 GYASISFVSNSLITMYMKCGQCSDALSVYA----NSVGTNSVSYNALISGFVENHEP-EK 181
G++ + SLI+ + G+ +A++V+ + ++YN +++ F + P K
Sbjct: 203 GFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNK 262
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL-------ALDCTPL 234
+ + M +G PD +++ L+ + G SLH +A ++ +
Sbjct: 263 ITSLVEKMKSDGIAPDAYTYNTLITCC------KRG-SLHQEAAQVFEEMKAAGFSYDKV 315
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQ----DKDVISWNTLINAFSHFDDQGKSFLFFKEM 290
N ++ +Y + + +E ++V + ++++N+LI+A++ D + K
Sbjct: 316 TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYAR-DGMLDEAMELKNQ 374
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
M E +PD FT+ ++L+ I + ++ NA + MY G
Sbjct: 375 MAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGK 434
Query: 351 IGYAHKVFSKMSY----RNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTG 406
K+F +++ ++++WNT++A FG +G+ +F++MK G P+ TF
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 407 LLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYI 460
L+ A + G + + M A G+ P++ ++ ++ L R G + E+ +
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDA-GVTPDLSTYNTVLAALARGGMWEQSEKVL 547
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 174/417 (41%), Gaps = 72/417 (17%)
Query: 40 LLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLFSQMK--- 92
+++M K GRV A +F+G+ E + S++++IS + G + A+++F +M+
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 93 ---------VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYM 143
V+ N VF + + +LV+ + G+ A ++ N+LIT
Sbjct: 239 CKPTLITYNVILN--VFGKMGTPWNKITSLVEKMKSDGI------APDAYTYNTLITCCK 290
Query: 144 KCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
+ +A V+ A + V+YNAL+ + ++H P++ +V M+ GF P
Sbjct: 291 RGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIV 350
Query: 200 SFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLI 259
++ N ++S YA+ ++E + + +
Sbjct: 351 TY-----------------------------------NSLISAYARDGMLDEAMELKNQM 375
Query: 260 QDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHAS 315
+K DV ++ TL++ F + F+EM N +P+ TF + +
Sbjct: 376 AEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN-AGCKPNICTFNAFIKMYGNRGK 434
Query: 316 FLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI----SWNT 371
F +I + D+ N L+ ++ + G VF +M + ++NT
Sbjct: 435 FTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNT 494
Query: 372 MIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
+I+A+ G E+A+ ++ +M GV PD T+ +L A GM + + ME
Sbjct: 495 LISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEME 551
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 85/426 (19%), Positives = 191/426 (44%), Gaps = 21/426 (4%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMS----ERNTVSWSAMISGYDQCGEHWMALHLFSQMK- 92
N LL++Y K R A KV + M + V+++++IS Y + G A+ L +QM
Sbjct: 318 NALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAE 377
Query: 93 --VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
P+ F + + LS + I +G N+ I MY G+ ++
Sbjct: 378 KGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTE 437
Query: 151 ALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLG 206
+ ++ + + V++N L++ F +N + VFK M + GFVP+R +F L+
Sbjct: 438 MMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLIS 497
Query: 207 FSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD----K 262
+ F M+++ + + + N +++ A+ E+ +V ++D
Sbjct: 498 AYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKP 557
Query: 263 DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQI 322
+ +++ +L++A+++ + G +E+ + I P +++ C+ ++
Sbjct: 558 NELTYCSLLHAYANGKEIGLMHSLAEEVYSGV-IEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 323 HAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGN 378
+ L D+ N++V++Y + + A+ V M R ++ ++N+++
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSR 676
Query: 379 HGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIG 438
++ EI ++ A+G+KPD +++ ++ A + +R F+ M + GI P++
Sbjct: 677 SADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNS-GIVPDVI 735
Query: 439 HFSCLI 444
++ I
Sbjct: 736 TYNTFI 741
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/401 (19%), Positives = 172/401 (42%), Gaps = 24/401 (5%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS----ERNTVSWSAMISGYDQCGEHWMA 84
G + VF LL+ + + G+V A +F+ M + N +++A I Y G+
Sbjct: 379 GTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEM 438
Query: 85 LHLFSQMKV--LPNEFVFASTLSACASLRALVQGQQIHGL---SLRSGYASISFVSNSLI 139
+ +F ++ V L + V +TL A + ++ G+ R+G+ N+LI
Sbjct: 439 MKIFDEINVCGLSPDIVTWNTLLAVFGQNGM--DSEVSGVFKEMKRAGFVPERETFNTLI 496
Query: 140 TMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
+ Y +CG A++VY V + +YN +++ E+ +V M
Sbjct: 497 SAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCK 556
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
P+ ++ LL N + SL + ++ ++ ++ + ++ + + E R
Sbjct: 557 PNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERA 616
Query: 256 FRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
F ++++ D+ + N++++ + K+ + M E P T+ S++ +
Sbjct: 617 FSELKERGFSPDITTLNSMVSIYGRRQMVAKANGVL-DYMKERGFTPSMATYNSLMYMHS 675
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS----YRNLI 367
A F ++I + D+ +N ++ Y + + A ++FS+M ++I
Sbjct: 676 RSADFGKSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVI 735
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
++NT I ++ + E AI + M G +P+ T+ ++
Sbjct: 736 TYNTFIGSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIV 776
>AT2G31400.1 | Symbols: GUN1 | genomes uncoupled 1 |
chr2:13387201-13390550 REVERSE LENGTH=918
Length = 918
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 166/361 (45%), Gaps = 19/361 (5%)
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALIS 171
++I + GY + + ++LI+ Y + G +A+SV+ + + N V+YNA+I
Sbjct: 252 AKRIFETAFAGGYGNTVYAFSALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVID 311
Query: 172 GFVENH-EPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD 230
+ E ++ + F M + G PDR +F LL + + +L + ++
Sbjct: 312 ACGKGGMEFKQVAKFFDEMQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIE 371
Query: 231 CTPLIGNVIMSMY---AQFNFIEEVV---RVFRLIQDKDVISWNTLINAFSHFDDQGKSF 284
N ++ Q + E++ V R++ +V+S++T+I+ F+ ++
Sbjct: 372 QDVFSYNTLLDAICKGGQMDLAFEILAQMPVKRIM--PNVVSYSTVIDGFAKAGRFDEAL 429
Query: 285 LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNM 344
F EM I D ++ ++L+ T I + DV +NAL+
Sbjct: 430 NLFGEM-RYLGIALDRVSYNTLLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGG 488
Query: 345 YAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
Y K G KVF++M NL++++T+I + GL + A+EIF + K+ G++ D
Sbjct: 489 YGKQGKYDEVKKVFTEMKREHVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRAD 548
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYI 460
V ++ L+ A +G+V + M GI+PN+ ++ +ID GR+ + +Y
Sbjct: 549 VVLYSALIDALCKNGLVGSAVSLIDEM-TKEGISPNVVTYNSIIDAFGRSATMDRSADYS 607
Query: 461 N 461
N
Sbjct: 608 N 608
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/397 (19%), Positives = 175/397 (44%), Gaps = 25/397 (6%)
Query: 13 CSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD----GMSERNTVSW 68
C K + F A + +++ +++ + G+V +A+++F+ G ++
Sbjct: 212 CDKAVGFYEFAVKRERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAF 271
Query: 69 SAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGL--- 122
SA+IS Y + G H A+ +F+ MK + PN + + + AC + ++ +Q+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACG--KGGMEFKQVAKFFDE 329
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHE 178
R+G NSL+ + + G A +++ + + SYN L+ + +
Sbjct: 330 MQRNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQ 389
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ FE+ M + +P+ S+ ++ F ++L + L + + N
Sbjct: 390 MDLAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNT 449
Query: 239 IMSMYAQFNFIEEVVRVFRLIQD----KDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
++S+Y + EE + + R + KDV+++N L+ + + F EM E
Sbjct: 450 LLSIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKRE- 508
Query: 295 SIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYA 354
+ P+ T+++++ + + +I DV +++AL++ K G +G A
Sbjct: 509 HVLPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCKNGLVGSA 568
Query: 355 HKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIE 387
+ +M+ N++++N++I AFG +R+ +
Sbjct: 569 VSLIDEMTKEGISPNVVTYNSIIDAFGRSATMDRSAD 605
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 52/322 (16%)
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQD----KDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
+ ++S Y + EE + VF +++ +++++N +I+A + K F + M
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 293 ECSIRPDDFTFASILASCT----WHASF-----LHGKQIHAFLFRTRQYWD--------- 334
++PD TF S+LA C+ W A+ + ++I +F D
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 335 -----------------VGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMI 373
V ++ +++ +AK G A +F +M Y + +S+NT++
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 374 AAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGI 433
+ + G E A++I +M + G+K D VT+ LL G + F M+ + +
Sbjct: 452 SIYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEVKKVFTEMKREH-V 510
Query: 434 APNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN---DPVVLGSLLSA-CRVHGNMAIGE 489
PN+ +S LID + G E E +F D V+ +L+ A C+ N +G
Sbjct: 511 LPNLLTYSTLIDGYSKGGLYKEAMEIFREFKSAGLRADVVLYSALIDALCK---NGLVGS 567
Query: 490 RLAKLLLEVPPVTTSPYVLLSN 511
++ L+ E+ SP V+ N
Sbjct: 568 AVS-LIDEMTKEGISPNVVTYN 588
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 91/230 (39%), Gaps = 49/230 (21%)
Query: 339 NALVNMYAKCGSIGYAHKVFSKMS----YRNLISWNTMIAAFGNHGLG-ERAIEIFEQMK 393
+AL++ Y + G A VF+ M NL+++N +I A G G+ ++ + F++M+
Sbjct: 272 SALISAYGRSGLHEEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQ 331
Query: 394 AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME------------------------- 428
GV+PD +TF LL C+ G+ F+ M
Sbjct: 332 RNGVQPDRITFNSLLAVCSRGGLWEAARNLFDEMTNRRIEQDVFSYNTLLDAICKGGQMD 391
Query: 429 ---------AAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN---DPVVLGSLL 476
I PN+ +S +ID +AGR E + +L D V +LL
Sbjct: 392 LAFEILAQMPVKRIMPNVVSYSTVIDGFAKAGRFDEALNLFGEMRYLGIALDRVSYNTLL 451
Query: 477 SACRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNL----YASDGMWNEV 522
S ++ + E +L E+ V V+ N Y G ++EV
Sbjct: 452 S---IYTKVGRSEEALDILREMASVGIKKDVVTYNALLGGYGKQGKYDEV 498
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 328 RTRQYWDVG-VHNALVNMYAKCGSIGYAHKVFSKM---SYRNLI-SWNTMIAAFGNHGLG 382
R R+ + G + +A+++ + G + A ++F Y N + +++ +I+A+G GL
Sbjct: 225 RERRKNEQGKLASAMISTLGRYGKVTIAKRIFETAFAGGYGNTVYAFSALISAYGRSGLH 284
Query: 383 ERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGM-VRKGDLYFNSMEAAYGIAPNIGHFS 441
E AI +F MK G++P+ VT+ ++ AC GM ++ +F+ M+ G+ P+ F+
Sbjct: 285 EEAISVFNSMKEYGLRPNLVTYNAVIDACGKGGMEFKQVAKFFDEMQRN-GVQPDRITFN 343
Query: 442 CLIDMLGRAG 451
L+ + R G
Sbjct: 344 SLLAVCSRGG 353
>AT1G62590.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23177294-23179198 REVERSE LENGTH=634
Length = 634
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/390 (20%), Positives = 179/390 (45%), Gaps = 27/390 (6%)
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA 106
V L ++ + N V++ +++G + G+ +AL+L ++M K+ + +F + + +
Sbjct: 210 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDS 269
Query: 107 CASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----SVGTN 162
R + + G +SLI+ G+ SDA + ++ + N
Sbjct: 270 LCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPN 329
Query: 163 SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLDDFRTGMSLH 221
V++NALI FV+ + + +++ M++ PD F++ L+ GF + R +
Sbjct: 330 LVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMH---DRLDKAKQ 386
Query: 222 CQAVKLALDCTP--LIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFS 275
++ DC P + N ++ + + +E+ +FR + + D +++ TLI
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 276 HFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
H D + FK+M+++ + PD T++ +L + ++ ++ ++ D+
Sbjct: 447 HDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDI 505
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQ 391
++ ++ K G + +F +S + N++++NTMI+ + L + A + ++
Sbjct: 506 YIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKK 565
Query: 392 MKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
MK +G P+S T+ L+ A +R GD
Sbjct: 566 MKEDGPLPNSGTYNTLIRA-----HLRDGD 590
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 94/461 (20%), Positives = 194/461 (42%), Gaps = 75/461 (16%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I +R ++ L ++K+G + + + LLN Y R+ A + D M E
Sbjct: 127 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 186
Query: 63 -RNTVSWSAMISG---YDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQ 118
+T++++ +I G +++ E + Q PN + G
Sbjct: 187 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY---------------GVV 231
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
++GL R N L M A + + V +N +I +
Sbjct: 232 VNGLCKR---GDTDLALNLLNKME-------------AAKIEADVVIFNTIIDSLCKYRH 275
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ +FK M +G P+ ++ L+ S C + + D + L+ ++
Sbjct: 276 VDDALNLFKEMETKGIRPNVVTYSSLI-------------SCLCSYGRWS-DASQLLSDM 321
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
I E+ + + +++++N LI+AF ++ + +M+ SI P
Sbjct: 322 I----------EKKI-------NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKR-SIDP 363
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D FT+ S++ H KQ+ F+ + DV +N L+ + K + ++F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423
Query: 359 SKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+MS+R L +++ T+I + G + A ++F+QM ++GV PD +T++ LL ++
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483
Query: 415 GMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
G + K F+ M+ + I +I ++ +I+ + +AG++ +
Sbjct: 484 GKLEKALEVFDYMQKSE-IKLDIYIYTTMIEGMCKAGKVDD 523
>AT1G31790.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:11394744-11395973 REVERSE
LENGTH=409
Length = 409
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 129/266 (48%), Gaps = 13/266 (4%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGE 80
L ++K ++ + N+LL M+V CGR+ + R++FD M R+ SW+ + G + G+
Sbjct: 110 LQVHIMKSSIRPTITFINRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGD 169
Query: 81 HWMALHLFSQMK--------VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGY--AS 130
+ A LF M +P+ ++ L ACA +R G+Q+H L + G+
Sbjct: 170 YEDAAFLFVSMLKHSQKGAFKIPS-WILGCVLKACAMIRDFELGKQVHALCHKLGFIDEE 228
Query: 131 ISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
S++S SLI Y + DA V N+V++ A ++ E ++ F M
Sbjct: 229 DSYLSGSLIRFYGEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMG 288
Query: 191 QEGFVPDRFSFVGLLGFSTNLDD-FRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
G + F +L + + D R+G +H A+KL + LI ++ MY ++ +
Sbjct: 289 NHGIKKNVSVFSNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKV 348
Query: 250 EEVVRVFRLIQDKDVIS-WNTLINAF 274
++ +VF+ +D+ +S WN ++ ++
Sbjct: 349 KDAEKVFKSSKDETSVSCWNAMVASY 374
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 124/277 (44%), Gaps = 10/277 (3%)
Query: 130 SISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
+I+F+ N L+ M++ CG+ ++ + S+ + G +E + E +F M
Sbjct: 122 TITFI-NRLLLMHVSCGRLDITRQMFDRMPHRDFHSWAIVFLGCIEMGDYEDAAFLFVSM 180
Query: 190 L---QEG-FVPDRFSFVGLLGFSTNLDDFRTGMSLH--CQAVKLALDCTPLIGNVIMSMY 243
L Q+G F + +L + DF G +H C + + + ++ Y
Sbjct: 181 LKHSQKGAFKIPSWILGCVLKACAMIRDFELGKQVHALCHKLGFIDEEDSYLSGSLIRFY 240
Query: 244 AQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTF 303
+F +E+ V + + + ++W + + + F EM N I+ + F
Sbjct: 241 GEFRCLEDANLVLHQLSNANTVAWAAKVTNDYREGEFQEVIRDFIEMGNH-GIKKNVSVF 299
Query: 304 ASILASCTWHASF-LHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMS 362
+++L +C+W + G+Q+HA + D + L+ MY K G + A KVF
Sbjct: 300 SNVLKACSWVSDGGRSGQQVHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSK 359
Query: 363 YRNLIS-WNTMIAAFGNHGLGERAIEIFEQMKAEGVK 398
+S WN M+A++ +G+ AI++ QMKA G+K
Sbjct: 360 DETSVSCWNAMVASYMQNGIYIEAIKLLYQMKATGIK 396
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVS-WSAMISGYDQCG 79
+HA +K+G +S + +L+ MY K G+V A KVF + +VS W+AM++ Y Q G
Sbjct: 319 VHANAIKLGFESDCLIRCRLIEMYGKYGKVKDAEKVFKSSKDETSVSCWNAMVASYMQNG 378
Query: 80 EHWMALHLFSQMK 92
+ A+ L QMK
Sbjct: 379 IYIEAIKLLYQMK 391
>AT1G64583.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:23987202-23988740 REVERSE
LENGTH=512
Length = 512
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 159/377 (42%), Gaps = 16/377 (4%)
Query: 67 SWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLS 123
S++ +I + +C AL + +M L P+ F S L + + + L
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167
Query: 124 LRSGYASISFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEP 179
++SGY V N+LI K G+ + AL + +G + V+YN L++G +
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227
Query: 180 EKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVI 239
+ + M++ PD +F L+ + L+ + ++ ++D + N I
Sbjct: 228 SDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSI 287
Query: 240 MSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECS 295
++ + + + F L+ K +V+++NTLI+ F F + F+ M E
Sbjct: 288 INGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE-G 346
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
D FT+ +++ I ++ R D+ H L++ G I A
Sbjct: 347 FNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESAL 406
Query: 356 KVFSKM----SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
F M Y ++++N MI E+A E+F ++ EGVKPD+ T+T +++
Sbjct: 407 VKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGL 466
Query: 412 NHSGMVRKGDLYFNSME 428
+G R+ D M+
Sbjct: 467 CKNGPRREADELIRRMK 483
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/308 (20%), Positives = 135/308 (43%), Gaps = 17/308 (5%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISG 74
F L ++K G + +V V N L++ K G + +A ++ + M ++ + V+++ +++G
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220
Query: 75 YDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASI 131
G A + M + P+ F + + L + Q+++ ++S
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280
Query: 132 SFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFK 187
+ NS+I G+ DA + + N V+YN LISGF + ++G ++F+
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340
Query: 188 LMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN 247
M EGF D F++ L+ + R + + C V + + +++
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400
Query: 248 FIEEVVRVFRLIQDKD----VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTF 303
IE + F +++ + ++++N +I+ D K++ F + E ++PD T+
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVE-GVKPDARTY 459
Query: 304 A-SILASC 310
IL C
Sbjct: 460 TIMILGLC 467
>AT3G09060.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:2766367-2768430 REVERSE
LENGTH=687
Length = 687
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 122/506 (24%), Positives = 210/506 (41%), Gaps = 108/506 (21%)
Query: 3 LETIGTLLQRCSKTMTF----GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFD 58
L+T L++ K F G + K G + VF + ++N K G++ A ++FD
Sbjct: 149 LQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFD 208
Query: 59 GMSER----NTVSWSAMISGYDQCGEHWMALHLFSQM----KVLPN---EFVFASTLSAC 107
MSER + ++ +I G+ + +H A+ L+ ++ V PN + S LS C
Sbjct: 209 EMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKC 268
Query: 108 ASL-------RALVQGQQ----------IHGL--------------SLRSGYASISFVS- 135
+ + Q ++ IHGL L ASI V+
Sbjct: 269 GRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTY 328
Query: 136 NSLITMYMKCGQCSDALSVY-----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
N+++ + +CG+ ++L ++ NSV N VSYN LI G +EN + ++ +++LM
Sbjct: 329 NTMLGGFCRCGKIKESLELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMP 386
Query: 191 QEGFVPDRFSF-VGLLGFSTN-------------------LDDFRTGMSLHCQAVKLALD 230
+G+ D+ ++ + + G N LD + + C K L+
Sbjct: 387 AKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLE 446
Query: 231 --------------------CTPLIGNVIMSMY---AQFNFIEEVVRVFRLIQDKDVISW 267
C LIG +I A F E R V+S+
Sbjct: 447 EASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCR----PTVVSY 502
Query: 268 NTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS-CTWHASFLHGKQIHAFL 326
N LI G++ F KEM+ E +PD T++ +L C L + H FL
Sbjct: 503 NILICGLCKAGKFGEASAFVKEML-ENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFL 561
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRN----LISWNTMIAAFGNHGLG 382
++ DV +HN L++ G + A V + M +RN L+++NT++ F G
Sbjct: 562 -QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDS 620
Query: 383 ERAIEIFEQMKAEGVKPDSVTFTGLL 408
RA I+ M G++PD +++ ++
Sbjct: 621 NRATVIWGYMYKMGLQPDIISYNTIM 646
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/345 (21%), Positives = 150/345 (43%), Gaps = 26/345 (7%)
Query: 136 NSLITMYMKCGQCSDALSVYA----NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
N+L+ +++ Q S++A V N +YN LI + E EK M +
Sbjct: 118 NTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWK 177
Query: 192 EGFVPDRFSF---VGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNF 248
EGF PD FS+ + L + LDD + L + + + N+++ + +
Sbjct: 178 EGFKPDVFSYSTVINDLAKAGKLDD---ALELFDEMSERGVAPDVTCYNILIDGFLKEKD 234
Query: 249 IEEVVRVF-RLIQDK----DVISWNTLINAFS---HFDDQGKSFLFFKEMMNECSIRPDD 300
+ + ++ RL++D +V + N +I+ S DD K + E M + D
Sbjct: 235 HKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIW----ERMKQNEREKDL 290
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
+T++S++ + + + L + DV +N ++ + +CG I + +++
Sbjct: 291 YTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRI 350
Query: 361 MSYR---NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
M ++ N++S+N +I +G + A I+ M A+G D T+ + +G V
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410
Query: 418 RKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINK 462
K +E++ G ++ ++ +ID L + RL E + +
Sbjct: 411 NKALGVMQEVESSGG-HLDVYAYASIIDCLCKKKRLEEASNLVKE 454
>AT1G62670.1 | Symbols: RPF2 | rna processing factor 2 |
chr1:23204773-23206665 REVERSE LENGTH=630
Length = 630
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 196/440 (44%), Gaps = 52/440 (11%)
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQMKVL--PNEFVFASTLSACASLRA-LVQGQQIHGL 122
+ +S ++S + + + + L QM+ L P+ S L C R+ L + G
Sbjct: 82 IEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGK 141
Query: 123 SLRSGYASISFVSNSLITMYMKCGQCSDALSV----YANSVGTNSVSYNALISGFVENHE 178
++ GY +SL+ Y + S+A+++ + N+V++N LI G +++
Sbjct: 142 MMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNK 201
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ + M+ +G PD ++ ++ D +L + + L+ LI N
Sbjct: 202 ASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNT 261
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNEC 294
I+ ++ +++ + +F+ ++ K +V+++++LI+ ++ + +M+ E
Sbjct: 262 IIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI-ER 320
Query: 295 SIRPDDFTFA-------------------------SILASCTWHASFLHG---------- 319
I PD FTF+ SI S ++S ++G
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380
Query: 320 KQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAA 375
KQ+ F+ + DV +N L+ + K + +VF +MS R N +++N +I
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 376 FGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAP 435
G + A EIF++M ++GV P+ +T+ LL +G + K + F ++ + + P
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS-KMEP 499
Query: 436 NIGHFSCLIDMLGRAGRLSE 455
I ++ +I+ + +AG++ +
Sbjct: 500 TIYTYNIMIEGMCKAGKVED 519
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/412 (19%), Positives = 174/412 (42%), Gaps = 60/412 (14%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLA----RKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
G Q + ++N K G LA K+ G E + ++ +I G + A
Sbjct: 216 GCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDA 275
Query: 85 LHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
L+LF +M+ + PN ++S +S + ++ + F ++LI
Sbjct: 276 LNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDA 335
Query: 142 YMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
++K G+ +A +Y S+ + V+Y++LI+GF + ++ ++F+ M+ + PD
Sbjct: 336 FVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPD 395
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
++ N ++ + ++ +EE + VFR
Sbjct: 396 VVTY-----------------------------------NTLIKGFCKYKRVEEGMEVFR 420
Query: 258 LIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+ + + +++N LI D + FKEM+++ + P+ T+ ++L +
Sbjct: 421 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSD-GVPPNIMTYNTLLDGLCKN 479
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISW 369
+ +L R++ + +N ++ K G + +F +S + +++++
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
NTMI+ F G E A +F++MK +G P+S + L+ A +R GD
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRA-----RLRDGD 586
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 98/489 (20%), Positives = 194/489 (39%), Gaps = 43/489 (8%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGM----S 61
I +R + + ++K+G + ++ + LLN Y R+ A + D M
Sbjct: 123 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 182
Query: 62 ERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACAS--------- 109
+ NTV+++ +I G + A+ L +M P+ + ++
Sbjct: 183 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 242
Query: 110 -LRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSV 164
L + QG+ G+ + N++I K DAL+++ + N V
Sbjct: 243 LLNKMEQGKLEPGV----------LIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVV 292
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQA 224
+Y++LIS + M++ PD F+F L+ L+ +
Sbjct: 293 TYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEM 352
Query: 225 VKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQ 280
VK ++D + + + +++ + + ++E ++F + K DV+++NTLI F +
Sbjct: 353 VKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRV 412
Query: 281 GKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNA 340
+ F+EM ++ + + T+ ++ ++I + ++ +N
Sbjct: 413 EEGMEVFREM-SQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471
Query: 341 LVNMYAKCGSIGYAHKVF-----SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
L++ K G + A VF SKM + ++N MI G E ++F + +
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKME-PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
GVKPD V + ++ G + D F M+ G PN G ++ LI R G
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED-GTLPNSGCYNTLIRARLRDGDREA 589
Query: 456 VEEYINKFH 464
E I +
Sbjct: 590 SAELIKEMR 598
>AT1G63330.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:23489840-23491519 FORWARD
LENGTH=559
Length = 559
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/394 (21%), Positives = 182/394 (46%), Gaps = 35/394 (8%)
Query: 50 VVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA 106
V L ++ + N V++ +++G + G+ +A +L ++M K+ + +F + + +
Sbjct: 135 VALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDS 194
Query: 107 CASLR----ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYAN----S 158
R AL +++ +R + S SLI+ G+ SDA + ++
Sbjct: 195 LCKYRHVDDALNLFKEMETKGIRPNVVTYS----SLISCLCSYGRWSDASQLLSDMIEKK 250
Query: 159 VGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL-GFSTNLDDFRTG 217
+ N V++NALI FV+ + + ++ M++ PD F++ L+ GF + R
Sbjct: 251 INPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMH---DRLD 307
Query: 218 MSLHCQAVKLALDCTPLIG--NVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLI 271
+ ++ DC P + N ++ + + +E+ +FR + + D +++ TLI
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367
Query: 272 NAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQ 331
H D + FK+M+++ + PD T++ +L + ++ ++ ++
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSD-GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 332 YWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIE 387
D+ ++ ++ K G + +F +S + N++++NTMI+ + L + A
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 388 IFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD 421
+ ++MK +G PDS T+ L+ A +R GD
Sbjct: 487 LLKKMKEDGPLPDSGTYNTLIRA-----HLRDGD 515
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/464 (20%), Positives = 199/464 (42%), Gaps = 81/464 (17%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I +R ++ L ++K+G + + + LLN Y R+ A + D M E
Sbjct: 52 INCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGY 111
Query: 63 -RNTVSWSAMISG---YDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQ 118
+T++++ +I G +++ E + Q PN + G
Sbjct: 112 RPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTY---------------GVV 156
Query: 119 IHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHE 178
++GL R I N L M A + + V +N +I +
Sbjct: 157 VNGLCKR---GDIDLAFNLLNKME-------------AAKIEADVVIFNTIIDSLCKYRH 200
Query: 179 PEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNV 238
+ +FK M +G P+ ++ L+ S C + + D + L+ ++
Sbjct: 201 VDDALNLFKEMETKGIRPNVVTYSSLI-------------SCLCSYGRWS-DASQLLSDM 246
Query: 239 IMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNEC---S 295
I E+ + + +++++N LI+AF +GK F+ +++ ++ S
Sbjct: 247 I----------EKKI-------NPNLVTFNALIDAFVK---EGK-FVEAEKLHDDMIKRS 285
Query: 296 IRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAH 355
I PD FT+ S++ H KQ+ F+ + D+ +N L+ + K +
Sbjct: 286 IDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGT 345
Query: 356 KVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIAC 411
++F +MS+R L +++ T+I + G + A ++F+QM ++GV PD +T++ LL
Sbjct: 346 ELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL 405
Query: 412 NHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
++G + K F+ M+ + I +I ++ +I+ + +AG++ +
Sbjct: 406 CNNGKLEKALEVFDYMQKS-EIKLDIYIYTTMIEGMCKAGKVDD 448
>AT5G39980.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:16001036-16003072 REVERSE
LENGTH=678
Length = 678
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 99/460 (21%), Positives = 183/460 (39%), Gaps = 51/460 (11%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLFS 89
VF N +L ++ + +A +FD M +R + ++S +I+ + + G AL
Sbjct: 155 VFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQ 214
Query: 90 QM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCG 146
+M +V + ++++ + L + I RSG NS+I +Y K
Sbjct: 215 KMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAK 274
Query: 147 QCSDA--LSVYANSVGT--NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
+A L N G N+VSY+ L+S +VENH+ + VF M + D +
Sbjct: 275 LFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCN 334
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK 262
++ LD + L K+ ++ + N I+ +Y + E + +FRL+Q K
Sbjct: 335 IMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRK 394
Query: 263 D----VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
D V+++NT+I + + K+ +EM + I P+ T+++I++
Sbjct: 395 DIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSR-GIEPNAITYSTIISIWGKAGKLDR 453
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGN 378
+ L + D ++ ++ Y + G +G+A ++ ++ + I T I
Sbjct: 454 AATLFQKLRSSGVEIDQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAK 513
Query: 379 HGLGERA-----------------------------------IEIFEQMKAEGVKPDSVT 403
G E A IE+FE+M+ G PDS
Sbjct: 514 AGRTEEATWVFRQAFESGEVKDISVFGCMINLYSRNQRYVNVIEVFEKMRTAGYFPDSNV 573
Query: 404 FTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCL 443
+L A K D + M+ + P+ HF L
Sbjct: 574 IAMVLNAYGKQREFEKADTVYREMQEEGCVFPDEVHFQML 613
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/342 (17%), Positives = 150/342 (43%), Gaps = 46/342 (13%)
Query: 154 VYANSVGTNSV-SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLD 212
V+ + T SV +YN ++ + + + +F M Q PDR+++ L+
Sbjct: 145 VHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFGKEG 204
Query: 213 DFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ----DKDVISWN 268
F + +S + + + ++ + ++ + + + + +F ++ D++++N
Sbjct: 205 MFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYN 264
Query: 269 TLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHG-------KQ 321
++IN + ++ L KEM NE + P+ +++++L+ + FL K+
Sbjct: 265 SMINVYGKAKLFREARLLIKEM-NEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKE 323
Query: 322 IHAFLFRT-------------------RQYW---------DVGVHNALVNMYAKCGSIGY 353
++ L T R +W +V +N ++ +Y + G
Sbjct: 324 VNCALDLTTCNIMIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGE 383
Query: 354 AHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLI 409
A +F M + N++++NTMI +G E+A + ++M++ G++P+++T++ ++
Sbjct: 384 AIHLFRLMQRKDIEQNVVTYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIIS 443
Query: 410 ACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
+G + + F + ++ G+ + + +I R G
Sbjct: 444 IWGKAGKLDRAATLFQKLRSS-GVEIDQVLYQTMIVAYERVG 484
>AT2G18940.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr2:8203873-8206341 REVERSE
LENGTH=822
Length = 822
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 117/565 (20%), Positives = 226/565 (40%), Gaps = 78/565 (13%)
Query: 27 KIGLQSH---VFVSNQLLNMYVKCGRVVLARKVFDGMSERNT----VSWSAMISGYDQCG 79
KI LQ + V +L+ Y + G+ A +F+ M E V+++ ++ + + G
Sbjct: 200 KIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMG 259
Query: 80 EHWMA-LHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVS 135
W L + +M+ + +EF ++ LSACA L + ++ GY +
Sbjct: 260 RSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTY 319
Query: 136 NSLITMYMKCGQCSDALSVYA----NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
N+L+ ++ K G ++ALSV NS +SV+YN L++ +V ++ V ++M +
Sbjct: 320 NALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTK 379
Query: 192 EGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKL-----ALDCTP--LIGNVIMSMYA 244
+G +P+ ++ T + D +A+KL C P N ++S+
Sbjct: 380 KGVMPNAITY-------TTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLG 432
Query: 245 QFNFIEEVVRVFRLIQ----DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
+ + E++++ ++ + +WNT++ + F+E M C PD
Sbjct: 433 KKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFRE-MKSCGFEPDR 491
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
TF +++++ S + +++ + R V +NAL+N A+ G V S
Sbjct: 492 DTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISD 551
Query: 361 MSYRNL----ISWNTMIAAFGNHG--LGERAIE--------------------------- 387
M + S++ M+ + G LG IE
Sbjct: 552 MKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRA 611
Query: 388 ------IFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFS 441
F K G KPD V F +L + M + + S+ G++P++ ++
Sbjct: 612 LAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIRED-GLSPDLVTYN 670
Query: 442 CLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPV 501
L+DM R G + EE + L S + + + + ++L E+
Sbjct: 671 SLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730
Query: 502 TTSPYVLLSNLYASD----GMWNEV 522
P + N + S GM+ E+
Sbjct: 731 GIRPCIFTYNTFVSGYTAMGMFAEI 755
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 110/490 (22%), Positives = 189/490 (38%), Gaps = 100/490 (20%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLFSQMK- 92
N+L+ YV+ G A V + M+++ N ++++ +I Y + G+ AL LF MK
Sbjct: 355 NELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKE 414
Query: 93 --VLPNEFVFASTLS---------------------ACASLRA-------LVQGQQIHGL 122
+PN + + LS C+ RA L + +
Sbjct: 415 AGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKF 474
Query: 123 SLR-------SGYASISFVSNSLITMYMKCGQCSDALSVYAN--SVGTNS--VSYNALIS 171
R G+ N+LI+ Y +CG DA +Y G N+ +YNAL++
Sbjct: 475 VNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLN 534
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
+ G V M +GF P S+ L L C
Sbjct: 535 ALARKGDWRSGENVISDMKSKGFKPTETSY------------------------SLMLQC 570
Query: 232 TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISW---NTLINAFSHFDDQG-----KS 283
GN Y IE R+ + + SW TL+ ++F + ++
Sbjct: 571 YAKGGN-----YLGIERIEN-----RIKEGQIFPSWMLLRTLL--LANFKCRALAGSERA 618
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
F FK+ +PD F S+L+ T + + + I + D+ +N+L++
Sbjct: 619 FTLFKKH----GYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMD 674
Query: 344 MYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKP 399
MY + G A ++ + +L+S+NT+I F GL + A+ + +M G++P
Sbjct: 675 MYVRRGECWKAEEILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRP 734
Query: 400 DSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEY 459
T+ + GM + + M A PN F ++D RAG+ SE ++
Sbjct: 735 CIFTYNTFVSGYTAMGMFAEIEDVIECM-AKNDCRPNELTFKMVVDGYCRAGKYSEAMDF 793
Query: 460 INKFHHLNDP 469
++K DP
Sbjct: 794 VSKIKTF-DP 802
>AT5G14770.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr5:4772881-4775697 REVERSE
LENGTH=938
Length = 938
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 156/344 (45%), Gaps = 12/344 (3%)
Query: 115 QGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV-GTNSVSYNALISGF 173
Q I+ + G + F N LI + K G+ S A+S+ N V ++V+YN +ISG
Sbjct: 112 QVSLIYSKMIACGVSPDVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGL 171
Query: 174 VENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP 233
E+ ++ ++ M++ G +PD S+ L+ + +F +L + +L L
Sbjct: 172 CEHGLADEAYQFLSEMVKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNL---- 227
Query: 234 LIGNVIMSMYAQFNFIEEVVRVFRLIQ-DKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
+ +++S Y + IEE R + D DV++++++IN + L +E M
Sbjct: 228 ITHTILLSSYYNLHAIEEAYRDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLRE-ME 286
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
E S+ P+ T+ +++ S + H +++ + D+ V+ L++ K G +
Sbjct: 287 EMSVYPNHVTYTTLVDSLFKANIYRHALALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLR 346
Query: 353 YAHKVFSKM----SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
A K F + N++++ ++ G A I QM + V P+ VT++ ++
Sbjct: 347 EAEKTFKMLLEDNQVPNVVTYTALVDGLCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMI 406
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGR 452
GM+ + ME + PN + +ID L +AG+
Sbjct: 407 NGYVKKGMLEEAVSLLRKMEDQ-NVVPNGFTYGTVIDGLFKAGK 449
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 132/613 (21%), Positives = 240/613 (39%), Gaps = 125/613 (20%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE----RNTVSWSAMISGYDQCGEHWMA 84
G V + ++N K G+V+ + M E N V+++ ++ + + A
Sbjct: 254 GFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKANIYRHA 313
Query: 85 LHLFSQMKV--LPNEFVFASTL-SACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
L L+SQM V +P + V + L L + ++ + L +L+
Sbjct: 314 LALYSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKMLLEDNQVPNVVTYTALVDG 373
Query: 142 YMKCGQCSDA----LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
K G S A + SV N V+Y+++I+G+V+ E+ + + M + VP+
Sbjct: 374 LCKAGDLSSAEFIITQMLEKSVIPNVVTYSSMINGYVKKGMLEEAVSLLRKMEDQNVVPN 433
Query: 198 RFSF----------------------VGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLI 235
F++ + L+G N + + H + + + L+
Sbjct: 434 GFTYGTVIDGLFKAGKEEMAIELSKEMRLIGVEEN-NYILDALVNHLKRIGRIKEVKGLV 492
Query: 236 GNVIMS--MYAQFNFIEEVVRVFR------------LIQDK----DVISWNTLINAFSHF 277
+++ Q N+ + F+ +Q++ DV+S+N LI+ F
Sbjct: 493 KDMVSKGVTLDQINYTSLIDVFFKGGDEEAALAWAEEMQERGMPWDVVSYNVLISGMLKF 552
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASIL-------------------ASCTWHASFL- 317
G + + + M E I PD TF ++ SC S +
Sbjct: 553 GKVGADWAY--KGMREKGIEPDIATFNIMMNSQRKQGDSEGILKLWDKMKSCGIKPSLMS 610
Query: 318 ----------HGK--------------QIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGY 353
+GK +IH L R + D + + + +I
Sbjct: 611 CNIVVGMLCENGKMEEAIHILNQMMLMEIHPNLTTYRIFLDTS------SKHKRADAIFK 664
Query: 354 AHKVFSKMSYRNLIS---WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
H+ +SY +S +NT+IA G+ ++A + M+A G PD+VTF L+
Sbjct: 665 THETL--LSYGIKLSRQVYNTLIATLCKLGMTKKAAMVMGDMEARGFIPDTVTFNSLMHG 722
Query: 411 CNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN--- 467
VRK ++ M A GI+PN+ ++ +I L AG + EV++++++
Sbjct: 723 YFVGSHVRKALSTYSVMMEA-GISPNVATYNTIIRGLSDAGLIKEVDKWLSEMKSRGMRP 781
Query: 468 DPVVLGSLLSACRVHGNMA-----IGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEV 522
D +L+S GNM E +A L VP TS Y +L + +A+ G ++
Sbjct: 782 DDFTYNALISGQAKIGNMKGSMTIYCEMIADGL--VP--KTSTYNVLISEFANVG---KM 834
Query: 523 TSARKMLKGSGLR 535
AR++LK G R
Sbjct: 835 LQARELLKEMGKR 847
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 38/231 (16%)
Query: 334 DVGVHNALVNMYAKCGSIGYAHKVF-SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQM 392
DV N L++ + K G + +A + +++ + +++NT+I+ HGL + A + +M
Sbjct: 128 DVFALNVLIHSFCKVGRLSFAISLLRNRVISIDTVTYNTVISGLCEHGLADEAYQFLSEM 187
Query: 393 KAEGVKPDSVTFTGLLIA-CNHSGMVRKGDL------------------YFN--SMEAAY 431
G+ PD+V++ L+ C VR L Y+N ++E AY
Sbjct: 188 VKMGILPDTVSYNTLIDGFCKVGNFVRAKALVDEISELNLITHTILLSSYYNLHAIEEAY 247
Query: 432 ------GIAPNIGHFSCLIDMLGRAGR-------LSEVEEYINKFHHLNDPVVLGSLLSA 478
G P++ FS +I+ L + G+ L E+EE +H+ ++ SL A
Sbjct: 248 RDMVMSGFDPDVVTFSSIINRLCKGGKVLEGGLLLREMEEMSVYPNHVTYTTLVDSLFKA 307
Query: 479 CRVHGNMAIGERLAKLLLEVPPVTTSPYVLLSNLYASDGMWNEVTSARKML 529
+A+ +++++ PV Y +L + G E KML
Sbjct: 308 NIYRHALAL---YSQMVVRGIPVDLVVYTVLMDGLFKAGDLREAEKTFKML 355
>AT3G54980.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:20370293-20372848 FORWARD
LENGTH=851
Length = 851
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/503 (19%), Positives = 226/503 (44%), Gaps = 46/503 (9%)
Query: 21 LHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYD 76
L +L G+ +V + L+ + K +V A +FD M + N+V++S +I +
Sbjct: 326 LKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFR 385
Query: 77 QCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
+ GE AL + +M+VL P+ F + + + + ++ S +G A++ F
Sbjct: 386 KNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANV-F 444
Query: 134 VSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
V N++++ K G+ +A + + +G N VSYN ++ G + VF +
Sbjct: 445 VCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNI 504
Query: 190 LQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFI 249
L++G P+ +++ L+ D + + + ++ ++ I++ +
Sbjct: 505 LEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQT 564
Query: 250 EEVVRVF-RLIQDKDV----ISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFA 304
+ + +I++K + +S+N++I+ F + + ++EM I P+ T+
Sbjct: 565 SKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGN-GISPNVITYT 623
Query: 305 SILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR 364
S++ + ++ + D+ + AL++ + K ++ A +FS++
Sbjct: 624 SLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEE 683
Query: 365 NLIS----WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKG 420
L +N++I+ F N G A++++++M +G++ D T+T L+ G+++ G
Sbjct: 684 GLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLI-----DGLLKDG 738
Query: 421 DL-----YFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN-DPVVL-- 472
+L + M+A G+ P+ ++ +++ L + G+ +V + + N P VL
Sbjct: 739 NLILASELYTEMQAV-GLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 473 ----------GSLLSACRVHGNM 485
G+L A R+H M
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEM 820
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 106/524 (20%), Positives = 219/524 (41%), Gaps = 41/524 (7%)
Query: 5 TIGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRV-----VLARKVFDG 59
T+ L+QR S T L++ ++ IG+ + L+ ++ + VL+R + G
Sbjct: 204 TLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERG 263
Query: 60 MSERNTVSWSAMISGYDQCGEHWMALHLFSQMK----VLPNEFVFASTLSACASLRALVQ 115
+E +++ +S + + + MA L +MK +P++ + S + A +
Sbjct: 264 -AEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDD 322
Query: 116 GQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNALIS 171
++ L G + + SLIT + K AL ++ NSV+++ LI
Sbjct: 323 AIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIE 382
Query: 172 GFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDC 231
F +N E EK E +K M G P F ++ + L ++ + L
Sbjct: 383 WFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-A 441
Query: 232 TPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFF 287
+ N I+S + +E + ++ + +V+S+N ++ + + + F
Sbjct: 442 NVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVF 501
Query: 288 KEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAK 347
++ E ++P+++T++ ++ C + + ++ + + + V+ ++N K
Sbjct: 502 SNIL-EKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 348 CGSIGYAHKVFSKMSYRNLI-----SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSV 402
G A ++ + M + S+N++I F G + A+ +E+M G+ P+ +
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 403 TFTGLLIA-CNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLID-------MLGRAGRLS 454
T+T L+ C ++ M + L G+ +I + LID M + S
Sbjct: 621 TYTSLMNGLCKNNRMDQA--LEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFS 678
Query: 455 E-VEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE 497
E +EE +N + SL+S R GNM L K +L+
Sbjct: 679 ELLEEGLNPSQP-----IYNSLISGFRNLGNMVAALDLYKKMLK 717
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/399 (20%), Positives = 167/399 (41%), Gaps = 25/399 (6%)
Query: 32 SHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHL 87
++VFV N +L+ K G+ A ++ M R N VS++ ++ G+ + +A +
Sbjct: 441 ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIV 500
Query: 88 FSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMK 144
FS + + PN + ++ + C ++ S V ++I K
Sbjct: 501 FSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCK 560
Query: 145 CGQCSDALSVYANSVGTNSV-----SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
GQ S A + AN + + SYN++I GF + E + ++ M G P+
Sbjct: 561 VGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVI 620
Query: 200 SFVGLLG--FSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
++ L+ N D M + + LD P G +I + N +E +F
Sbjct: 621 TYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDI-PAYGALIDGFCKRSN-MESASALFS 678
Query: 258 LIQDKDVIS----WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+ ++ + +N+LI+ F + + + +K+M+ + +R D T+ +++
Sbjct: 679 ELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD-GLRCDLGTYTTLIDGLLKD 737
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLIS----W 369
+ + +++ + D ++ +VN +K G K+F +M N+ +
Sbjct: 738 GNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIY 797
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
N +IA G + A + ++M +G+ PD TF L+
Sbjct: 798 NAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
>AT1G63070.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23385324-23387167 REVERSE LENGTH=590
Length = 590
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 99/466 (21%), Positives = 199/466 (42%), Gaps = 50/466 (10%)
Query: 63 RNTVSWSAMISGY--DQCGEHWM-----------ALHLFSQM---KVLPNEFVFASTLSA 106
R T+ W +G D C E+ A+ LF M + P+ F+ LSA
Sbjct: 25 RTTLCWERSFAGASSDDCRENLSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSA 84
Query: 107 CASLR----ALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSV--- 159
A + + G+Q+ L + + S I + + Q S AL++ +
Sbjct: 85 IAKMNKFDLVISLGEQMQNLGISHNLYTYSI----FINYFCRRSQLSLALAILGKMMKLG 140
Query: 160 -GTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLG--FSTNLDDFRT 216
G + V+ N+L++GF + + + M++ G+ PD +F L+ F N +
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHN----KA 196
Query: 217 GMSLHCQAVKLALDCTPLI---GNVIMSMYAQFNFIEEVVRVFRLIQDK---DVISWNTL 270
++ + C P + G VI + + + + ++ + K DV+ +NT+
Sbjct: 197 SEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTI 256
Query: 271 INAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTR 330
I+ + +F F +M + I+PD FT+ +++ + + ++ + +
Sbjct: 257 IDGLCKYKHMDDAFDLFNKMETK-GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKN 315
Query: 331 QYWDVGVHNALVNMYAKCGSIGYAHKVFSKM-----SYRNLISWNTMIAAFGNHGLGERA 385
D+ NAL++ + K G + A K++ +M + +++++NT+I F + E
Sbjct: 316 INPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEG 375
Query: 386 IEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLID 445
+E+F +M G+ ++VT+T L+ + + F M + G+ P+I ++ L+D
Sbjct: 376 MEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQM-VSDGVHPDIMTYNILLD 434
Query: 446 MLGRAGRLSE---VEEYINKFHHLNDPVVLGSLLSACRVHGNMAIG 488
L G + V EY+ K D V +++ A G + G
Sbjct: 435 GLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDG 480
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/476 (20%), Positives = 196/476 (41%), Gaps = 35/476 (7%)
Query: 6 IGTLLQRCSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE--- 62
I +R ++ + ++K+G + N LLN + R+ A + D M E
Sbjct: 117 INYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 176
Query: 63 -RNTVSWSAMISGYDQCGEHWMALHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQ 118
+TV+++ ++ G Q + A+ L +M V P+ + + ++ +G+
Sbjct: 177 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK-----RGEP 231
Query: 119 IHGLSL-----RSGYASISFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNAL 169
L+L + + + N++I K DA ++ + + +YN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291
Query: 170 ISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL 229
IS + ML++ PD F L+ L+ + VK +
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVK-SK 350
Query: 230 DCTPLIG--NVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKS 283
C P + N ++ + ++ +EE + VFR + + + +++ TLI+ F D +
Sbjct: 351 HCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNA 410
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVN 343
+ FK+M+++ + PD T+ +L + + + ++ + D+ + ++
Sbjct: 411 QMVFKQMVSD-GVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIE 469
Query: 344 MYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKP 399
K G + +F +S + N++++ TM++ F GL E A +F +MK +G P
Sbjct: 470 ALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLP 529
Query: 400 DSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
+S T+ L+ A G M + G A + F + +ML GRL +
Sbjct: 530 NSGTYNTLIRARLRDGDEAASAELIKEMRSC-GFAGDASTFGLVTNML-HDGRLDK 583
>AT1G05670.2 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 20/314 (6%)
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
N+++ Q I+E + L++ K DVIS++T++N + F + K + E+M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVMK 308
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
++P+ + + SI+ ++ + + R D V+ L++ + K G I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 353 YAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
A K F +M R++ +++ +I+ F G A ++F +M +G++PDSVTFT L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN- 467
+G ++ N M A G +PN+ ++ LID L + G L E +++ +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 468 DPVVL--GSLLSACRVHGNMAIGERLAKLLLEVPP----VTTSPYVLLSNLYASDGMWNE 521
P + S+++ GN+ E KL+ E T Y L + Y G ++
Sbjct: 488 QPNIFTYNSIVNGLCKSGNI---EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 522 VTSARKMLKGSGLR 535
K + G GL+
Sbjct: 545 AQEILKEMLGKGLQ 558
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 183/452 (40%), Gaps = 84/452 (18%)
Query: 9 LLQRCSKTMT-FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER---- 63
L + C KT T + ++G+ +V N +++ + GR+ A + M +
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 64 NTVSWSAMISGYDQCGEH---WMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH 120
+ +S+S +++GY + GE W + + + + PN +++ S + + L + ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDA----LSVYANSVGTNSVSYNALISGFVEN 176
+R G + V +LI + K G A +++ + + ++Y A+ISGF +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
+ + ++F M +G PD +F L+ + +H ++ C+P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--CSP--- 454
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
+V+++ TLI+ D + EM + +
Sbjct: 455 --------------------------NVVTYTTLIDGLCKEGDLDSANELLHEMW-KIGL 487
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
+P+ FT+ N++VN K G+I A K
Sbjct: 488 QPNIFTY-----------------------------------NSIVNGLCKSGNIEEAVK 512
Query: 357 VFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
+ + L +++ T++ A+ G ++A EI ++M +G++P VTF L+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLI 444
GM+ G+ N M A GIAPN F+ L+
Sbjct: 573 LHGMLEDGEKLLNWM-LAKGIAPNATTFNSLV 603
>AT1G05670.1 | Symbols: | Pentatricopeptide repeat (PPR-like)
superfamily protein | chr1:1698574-1700799 REVERSE
LENGTH=741
Length = 741
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 144/314 (45%), Gaps = 20/314 (6%)
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
N+++ Q I+E + L++ K DVIS++T++N + F + K + E+M
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI-EVMK 308
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
++P+ + + SI+ ++ + + R D V+ L++ + K G I
Sbjct: 309 RKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIR 368
Query: 353 YAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
A K F +M R++ +++ +I+ F G A ++F +M +G++PDSVTFT L+
Sbjct: 369 AASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELI 428
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN- 467
+G ++ N M A G +PN+ ++ LID L + G L E +++ +
Sbjct: 429 NGYCKAGHMKDAFRVHNHMIQA-GCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGL 487
Query: 468 DPVVL--GSLLSACRVHGNMAIGERLAKLLLEVPP----VTTSPYVLLSNLYASDGMWNE 521
P + S+++ GN+ E KL+ E T Y L + Y G ++
Sbjct: 488 QPNIFTYNSIVNGLCKSGNI---EEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDK 544
Query: 522 VTSARKMLKGSGLR 535
K + G GL+
Sbjct: 545 AQEILKEMLGKGLQ 558
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 92/452 (20%), Positives = 183/452 (40%), Gaps = 84/452 (18%)
Query: 9 LLQRCSKTMT-FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER---- 63
L + C KT T + ++G+ +V N +++ + GR+ A + M +
Sbjct: 220 LSKDCYKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTP 279
Query: 64 NTVSWSAMISGYDQCGEH---WMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIH 120
+ +S+S +++GY + GE W + + + + PN +++ S + + L + ++
Sbjct: 280 DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 339
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDA----LSVYANSVGTNSVSYNALISGFVEN 176
+R G + V +LI + K G A +++ + + ++Y A+ISGF +
Sbjct: 340 SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 399
Query: 177 HEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIG 236
+ + ++F M +G PD +F L+ + +H ++ C+P
Sbjct: 400 GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAG--CSP--- 454
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSI 296
+V+++ TLI+ D + EM + +
Sbjct: 455 --------------------------NVVTYTTLIDGLCKEGDLDSANELLHEMW-KIGL 487
Query: 297 RPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHK 356
+P+ FT+ N++VN K G+I A K
Sbjct: 488 QPNIFTY-----------------------------------NSIVNGLCKSGNIEEAVK 512
Query: 357 VFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
+ + L +++ T++ A+ G ++A EI ++M +G++P VTF L+
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLI 444
GM+ G+ N M A GIAPN F+ L+
Sbjct: 573 LHGMLEDGEKLLNWM-LAKGIAPNATTFNSLV 603
>AT1G12300.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4184163-4186076 REVERSE
LENGTH=637
Length = 637
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 95/448 (21%), Positives = 183/448 (40%), Gaps = 61/448 (13%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN----TVSWSAMISGYDQCGEHWMA 84
G Q + +LN+ K G+ LA ++ M ERN V +S +I G + G A
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNA 282
Query: 85 LHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMK 144
+LF++M++ G + N LI +
Sbjct: 283 FNLFNEMEM--------------------------------KGITTNIITYNILIGGFCN 310
Query: 145 CGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFS 200
G+ D + + + N V+++ LI FV+ + + E+ K M+ G PD +
Sbjct: 311 AGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTIT 370
Query: 201 FVGLL-GF--STNLDDFRTGMSLHCQAVKLALDCTPLIG--NVIMSMYAQFNFIEEVVRV 255
+ L+ GF +LD + L ++ C P I N++++ Y + N I++ + +
Sbjct: 371 YTSLIDGFCKENHLDKANQMVDLM-----VSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 256 FRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
FR + + D +++NTLI F + F+EM++ + P+ T+ +L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSR-KVPPNIVTYKILLDGLC 484
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLI 367
+ +I + +++ D+G++N +++ + A +F + + +
Sbjct: 485 DNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVK 544
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSM 427
++N MI G A +F +M+ +G PD T+ L+ A G K +
Sbjct: 545 TYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEEL 604
Query: 428 EAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
+ G + + +IDML GRL +
Sbjct: 605 KRC-GFSVDASTIKMVIDMLS-DGRLKK 630
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 130/309 (42%), Gaps = 48/309 (15%)
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL- 307
+E V R+ + D+I+ NTL+N + ++ L +M+ E +P+ T+ +L
Sbjct: 178 LELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMV-EYGCQPNAVTYGPVLN 236
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR--- 364
C + L + + R + D ++ +++ K GS+ A +F++M +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIK-LDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGIT 295
Query: 365 -NLISWNTMIAAFGNHG-----------LGERAI------------------------EI 388
N+I++N +I F N G + +R I E+
Sbjct: 296 TNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEEL 355
Query: 389 FEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
++M G+ PD++T+T L+ + K + + M + G PNI F+ LI+
Sbjct: 356 HKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM-VSKGCDPNIRTFNILINGYC 414
Query: 449 RAGRLSEVEEYINKFHH---LNDPVVLGSLLSACRVHGNMAIGERLAKLLL--EVPPVTT 503
+A R+ + E K + D V +L+ G + + + L + ++ +VPP
Sbjct: 415 KANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIV 474
Query: 504 SPYVLLSNL 512
+ +LL L
Sbjct: 475 TYKILLDGL 483
>AT5G64320.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:25723247-25725439 REVERSE
LENGTH=730
Length = 730
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 182/435 (41%), Gaps = 29/435 (6%)
Query: 64 NTVSWSAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIH 120
N+V + +I +C AL L +M ++ P+ F + + + ++
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 121 GLSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPE 180
L G+A L+ K G+ A ++ V +N LI GFV + +
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 181 KGFEVFKLMLQE-GFVPDRFSFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGN- 237
V M+ G VPD ++ L+ G+ + G++L C P + +
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYGY---WKEGLVGLALEVLHDMRNKGCKPNVYSY 427
Query: 238 -VIMSMYAQFNFIEEVVRVFRLIQ----DKDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
+++ + + I+E V + + + +N LI+AF ++ F+EM
Sbjct: 428 TILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPR 487
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
+ +PD +TF S+++ H + + + +N L+N + + G I
Sbjct: 488 K-GCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 353 YAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
A K+ ++M ++ + I++N++I G ++A +FE+M +G P +++ L+
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLN- 467
SGMV + + F G P+I F+ LI+ L RAGR +E+ + F L
Sbjct: 607 NGLCRSGMVEEA-VEFQKEMVLRGSTPDIVTFNSLINGLCRAGR---IEDGLTMFRKLQA 662
Query: 468 -----DPVVLGSLLS 477
D V +L+S
Sbjct: 663 EGIPPDTVTFNTLMS 677
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 145/329 (44%), Gaps = 15/329 (4%)
Query: 136 NSLITMYMKCGQCSDALSVYANSVGTNSV-----SYNALISGFVENHEPEKGFEVFKLML 190
N+LI ++ G+ DA +V ++ V + + +YN+LI G+ + EV M
Sbjct: 357 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMR 416
Query: 191 QEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIE 250
+G P+ +S+ L+ L ++ + L + N ++S + + + I
Sbjct: 417 NKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIP 476
Query: 251 EVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASI 306
E V +FR + K DV ++N+LI+ D+ + ++M++E + + T+ ++
Sbjct: 477 EAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISE-GVVANTVTYNTL 535
Query: 307 LASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM----S 362
+ + +++ + D +N+L+ + G + A +F KM
Sbjct: 536 INAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGH 595
Query: 363 YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDL 422
+ IS N +I G+ E A+E ++M G PD VTF L+ +G + G
Sbjct: 596 APSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 655
Query: 423 YFNSMEAAYGIAPNIGHFSCLIDMLGRAG 451
F ++A GI P+ F+ L+ L + G
Sbjct: 656 MFRKLQAE-GIPPDTVTFNTLMSWLCKGG 683
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/388 (21%), Positives = 161/388 (41%), Gaps = 58/388 (14%)
Query: 40 LLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLFSQMKVLPNEFV 99
L+N K GRV A+ +F + + V ++ +I G+ G L VL +
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHG------RLDDAKAVLSDMVT 381
Query: 100 FASTLSACASLRALVQG---QQIHGLSLR-------SGYASISFVSNSLITMYMKCGQCS 149
+ + +L+ G + + GL+L G + L+ + K G+
Sbjct: 382 SYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKID 441
Query: 150 DALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLL 205
+A +V A+ + N+V +N LIS F + H + E+F+ M ++G PD ++F L+
Sbjct: 442 EAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 206 GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVI 265
+D+ + + L + E VV + +
Sbjct: 502 SGLCEVDEIKHALWLLRDMIS-----------------------EGVV--------ANTV 530
Query: 266 SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP-DDFTFASILASCTWHASFLHGKQIHA 324
++NTLINAF + ++ EM+ + S P D+ T+ S++ + +
Sbjct: 531 TYNTLINAFLRRGEIKEARKLVNEMVFQGS--PLDEITYNSLIKGLCRAGEVDKARSLFE 588
Query: 325 FLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHG 380
+ R N L+N + G + A + +M R +++++N++I G
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAG 648
Query: 381 LGERAIEIFEQMKAEGVKPDSVTFTGLL 408
E + +F +++AEG+ PD+VTF L+
Sbjct: 649 RIEDGLTMFRKLQAEGIPPDTVTFNTLM 676
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 84/384 (21%), Positives = 155/384 (40%), Gaps = 17/384 (4%)
Query: 162 NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLH 221
NSV Y LI + + + ++ + M G VPD +F ++ D +
Sbjct: 251 NSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMV 310
Query: 222 CQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQG 281
+ + + +M+ + ++ +F I +++ +NTLI+ F
Sbjct: 311 NRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLD 370
Query: 282 KSFLFFKEMMNECSIRPDDFTFASILASCTWHASF--LHGKQIHAFLFRTRQYWDVGVHN 339
+ +M+ I PD T+ S++ W L + +H + + +V +
Sbjct: 371 DAKAVLSDMVTSYGIVPDVCTYNSLIYG-YWKEGLVGLALEVLHDMRNKGCK-PNVYSYT 428
Query: 340 ALVNMYAKCGSIGYAHKVFSKMS----YRNLISWNTMIAAFGNHGLGERAIEIFEQMKAE 395
LV+ + K G I A+ V ++MS N + +N +I+AF A+EIF +M +
Sbjct: 429 ILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRK 488
Query: 396 GVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
G KPD TF L+ ++ M + G+ N ++ LI+ R G + E
Sbjct: 489 GCKPDVYTFNSLISGLCEVDEIKHALWLLRDM-ISEGVVANTVTYNTLINAFLRRGEIKE 547
Query: 456 VEEYINKFHHLNDP---VVLGSLLSACRVHGNMAIGERLAKLLLEV--PPVTTSPYVLLS 510
+ +N+ P + SL+ G + L + +L P S +L++
Sbjct: 548 ARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILIN 607
Query: 511 NLYASDGMWNEVTSARK--MLKGS 532
L S GM E +K +L+GS
Sbjct: 608 GLCRS-GMVEEAVEFQKEMVLRGS 630
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/383 (22%), Positives = 157/383 (40%), Gaps = 32/383 (8%)
Query: 165 SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQA 224
SYN ++ V + + VF ML P F+F ++ +++ + +SL
Sbjct: 184 SYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDM 243
Query: 225 VKLALDCTP--LIGNVIMSMYAQFNFIEEVVRV----FRLIQDKDVISWNTLINAFSHFD 278
K C P +I ++ ++ N + E +++ F + D ++N +I FD
Sbjct: 244 TKHG--CVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 279 DQGKSFLFFKEMMNECSIR---PDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDV 335
++ +M+N IR PDD T+ ++ K LF ++
Sbjct: 302 RINEA----AKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKD----LFYRIPKPEI 353
Query: 336 GVHNALVNMYAKCGSIGYAHKVFSKM--SY---RNLISWNTMIAAFGNHGLGERAIEIFE 390
+ N L++ + G + A V S M SY ++ ++N++I + GL A+E+
Sbjct: 354 VIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLH 413
Query: 391 QMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRA 450
M+ +G KP+ ++T L+ G + + N M +A G+ PN F+CLI +
Sbjct: 414 DMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEM-SADGLKPNTVGFNCLISAFCKE 472
Query: 451 GRLSEVEEYINKFHHLN---DPVVLGSLLSA-CRVHGNMAIGERLAKLLLEVPPVTTSPY 506
R+ E E + D SL+S C V L ++ E T Y
Sbjct: 473 HRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTY 532
Query: 507 VLLSNLYASDGMWNEVTSARKML 529
L N + G E+ ARK++
Sbjct: 533 NTLINAFLRRG---EIKEARKLV 552
>AT1G64100.2 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23795563 FORWARD LENGTH=806
Length = 806
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 185/425 (43%), Gaps = 36/425 (8%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGY 75
L +++IGL V N L+N GRV+ A + + M + + V++ +++G
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 76 DQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
+ G+ AL+L S+M+ + P+ ++++ + Q + L G A
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 133 FVSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
F N +I + G+ SDA + + + + +++NALIS V+ K FE KL
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKL 388
Query: 189 ---MLQEGFVPDRFSFVGLL-GFSTN--LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
ML PD ++ ++ GF + DD + L + N I+ +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF-------NTIIDV 441
Query: 243 YAQFNFIEEVVRVFRLIQDKDVI----SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
Y + ++E +++ R I + ++ ++NTLI+ F D+ + F+EM++ + P
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCP 500
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D T +L + ++ + ++ D +N +++ K + A +F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 359 SKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+ ++ ++N MI+ F A +F +MK G +PD+ T+ L+ C +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 415 GMVRK 419
G + K
Sbjct: 621 GEIDK 625
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 152/353 (43%), Gaps = 45/353 (12%)
Query: 136 NSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
N +I ++++ + A+S+Y + N S+N LI F + H+ F + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 192 EGFVPDRFSFVGLLGFSTNLDD----------------FRTGMSLHCQAVKLALDCTPLI 235
GF PD +F LL L+D F ++L Q V++ L TP++
Sbjct: 170 LGFQPDVVTFNTLL-HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL--TPVV 226
Query: 236 ---GNVIMSMYAQFNFIEEVVRVFRLIQDK---DVISWNTLINAFSHFDDQGKSFLFFKE 289
+I + + +E V +++ DV+++ T++N D KS L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT-KSALNLLS 285
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
M E I+PD +++I+ + + + + +V +N +++ + G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 350 SIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
A ++ M R +++++N +I+A G A ++ ++M + PD+VT+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 406 GLLIA-CNHSGMVRKGDLYFNSMEAAYGI--APNIGHFSCLIDMLGRAGRLSE 455
++ C H+ F+ + + + +P++ F+ +ID+ RA R+ E
Sbjct: 406 SMIYGFCKHN--------RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/389 (17%), Positives = 160/389 (41%), Gaps = 51/389 (13%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMAL 85
++ V + + +++ K G A+ +F M E+ N +++ MI G+ G A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 86 HLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMY 142
L M ++ P+ F + +SA L + +++ L + NS+I +
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 143 MKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
K + DA ++ + V++N +I + ++G ++ + + + G V + ++
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ-- 260
L+ +D+ L + + + + N+++ + + +EE + +F +IQ
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 261 --DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
D D +++N +I+ +++ F CS+ +H
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLF------CSLP-------------------IH 566
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIA 374
G + DV +N +++ + +I A+ +F KM + ++NT+I
Sbjct: 567 GVE-----------PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
G +++IE+ +M++ G D+ T
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/406 (20%), Positives = 164/406 (40%), Gaps = 44/406 (10%)
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNA--LISGFVENHEP 179
++L+S + V +S++ KC Q + + + V N+ LI G V
Sbjct: 1 MTLQSQSSHCLNVHSSMVRDIEKCEQ-KTKRDIEKKNTKSGGVRLNSRRLIHGRV----A 55
Query: 180 EKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDD---FRTGMSLHCQAVKLALDCTPLIG 236
EKG + + Q F + + +LDD F M + + A+DC +IG
Sbjct: 56 EKGTKSLPSLTQVTFEGEELKLKSGSHYFKSLDDAIDFFDYM-VRSRPFYTAVDCNKVIG 114
Query: 237 NVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
++ + N + + ++R ++ + ++ S+N LI F S F ++
Sbjct: 115 -----VFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKL-T 168
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT---------RQYWDVGVH----- 338
+ +PD TF ++L + ++ T Q ++G+
Sbjct: 169 KLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 339 -NALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMK 393
N L+N G + A + +KM + L +++ T++ G + A+ + +M+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKME 288
Query: 394 AEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRL 453
+KPD V ++ ++ G F+ M GIAPN+ ++C+ID GR
Sbjct: 289 ETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMIDGFCSFGRW 347
Query: 454 SEVEEYINKF--HHLN-DPVVLGSLLSACRVHGNMAIGERLAKLLL 496
S+ + + +N D + +L+SA G + E+L +L
Sbjct: 348 SDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 62/411 (15%), Positives = 170/411 (41%), Gaps = 31/411 (7%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLFSQMKV 93
N+++ ++V+ R +A ++ M R N S++ +I + C + +L F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 94 L---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
L P+ F + L + + + G + +G+ + + ++ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI--------- 220
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
+ +++N LI+G + + M+ +G D ++ ++
Sbjct: 221 -------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVIS 266
+ D ++ ++L + + + +I + I+ + + +F + +K +V +
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 267 WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
+N +I+ F F + ++M+ E I PD TF +++++ +++ +
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAI 386
+ D +N+++ + K A +F M+ +++++NT+I + + +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIA-CNHSGMVRKGDLYFNSMEAAYGIAPN 436
++ ++ G+ ++ T+ L+ C + DL F M ++G+ P+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL-FQEM-ISHGVCPD 501
>AT1G64100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr1:23791585-23793641 FORWARD LENGTH=666
Length = 666
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 185/425 (43%), Gaps = 36/425 (8%)
Query: 20 GLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGY 75
L +++IGL V N L+N GRV+ A + + M + + V++ +++G
Sbjct: 212 ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 271
Query: 76 DQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASIS 132
+ G+ AL+L S+M+ + P+ ++++ + Q + L G A
Sbjct: 272 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 331
Query: 133 FVSNSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKL 188
F N +I + G+ SDA + + + + +++NALIS V+ K FE KL
Sbjct: 332 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEG---KLFEAEKL 388
Query: 189 ---MLQEGFVPDRFSFVGLL-GFSTN--LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSM 242
ML PD ++ ++ GF + DD + L + N I+ +
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTF-------NTIIDV 441
Query: 243 YAQFNFIEEVVRVFRLIQDKDVI----SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRP 298
Y + ++E +++ R I + ++ ++NTLI+ F D+ + F+EM++ + P
Sbjct: 442 YCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH-GVCP 500
Query: 299 DDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVF 358
D T +L + ++ + ++ D +N +++ K + A +F
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 359 SKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHS 414
+ ++ ++N MI+ F A +F +MK G +PD+ T+ L+ C +
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKA 620
Query: 415 GMVRK 419
G + K
Sbjct: 621 GEIDK 625
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/353 (20%), Positives = 152/353 (43%), Gaps = 45/353 (12%)
Query: 136 NSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
N +I ++++ + A+S+Y + N S+N LI F + H+ F + +
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 192 EGFVPDRFSFVGLLGFSTNLDD----------------FRTGMSLHCQAVKLALDCTPLI 235
GF PD +F LL L+D F ++L Q V++ L TP++
Sbjct: 170 LGFQPDVVTFNTLL-HGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGL--TPVV 226
Query: 236 ---GNVIMSMYAQFNFIEEVVRVFRLIQDK---DVISWNTLINAFSHFDDQGKSFLFFKE 289
+I + + +E V +++ DV+++ T++N D KS L
Sbjct: 227 ITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDT-KSALNLLS 285
Query: 290 MMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
M E I+PD +++I+ + + + + +V +N +++ + G
Sbjct: 286 KMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFG 345
Query: 350 SIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
A ++ M R +++++N +I+A G A ++ ++M + PD+VT+
Sbjct: 346 RWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYN 405
Query: 406 GLLIA-CNHSGMVRKGDLYFNSMEAAYGI--APNIGHFSCLIDMLGRAGRLSE 455
++ C H+ F+ + + + +P++ F+ +ID+ RA R+ E
Sbjct: 406 SMIYGFCKHN--------RFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDE 450
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/389 (17%), Positives = 160/389 (41%), Gaps = 51/389 (13%)
Query: 30 LQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMAL 85
++ V + + +++ K G A+ +F M E+ N +++ MI G+ G A
Sbjct: 292 IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 351
Query: 86 HLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMY 142
L M ++ P+ F + +SA L + +++ L + NS+I +
Sbjct: 352 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 411
Query: 143 MKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
K + DA ++ + V++N +I + ++G ++ + + + G V + ++
Sbjct: 412 CKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYN 471
Query: 203 GLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ-- 260
L+ +D+ L + + + + N+++ + + +EE + +F +IQ
Sbjct: 472 TLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMS 531
Query: 261 --DKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLH 318
D D +++N +I+ +++ F CS+ +H
Sbjct: 532 KIDLDTVAYNIIIHGMCKGSKVDEAWDLF------CSLP-------------------IH 566
Query: 319 GKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIA 374
G + DV +N +++ + +I A+ +F KM + ++NT+I
Sbjct: 567 GVE-----------PDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615
Query: 375 AFGNHGLGERAIEIFEQMKAEGVKPDSVT 403
G +++IE+ +M++ G D+ T
Sbjct: 616 GCLKAGEIDKSIELISEMRSNGFSGDAFT 644
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/295 (20%), Positives = 123/295 (41%), Gaps = 33/295 (11%)
Query: 228 ALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKS 283
A+DC +IG ++ + N + + ++R ++ + ++ S+N LI F S
Sbjct: 106 AVDCNKVIG-----VFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFS 160
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRT---------RQYWD 334
F ++ + +PD TF ++L + ++ T Q +
Sbjct: 161 LSTFGKL-TKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVE 219
Query: 335 VGVH------NALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGER 384
+G+ N L+N G + A + +KM + L +++ T++ G +
Sbjct: 220 IGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKS 279
Query: 385 AIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLI 444
A+ + +M+ +KPD V ++ ++ G F+ M GIAPN+ ++C+I
Sbjct: 280 ALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM-LEKGIAPNVFTYNCMI 338
Query: 445 DMLGRAGRLSEVEEYINKF--HHLN-DPVVLGSLLSACRVHGNMAIGERLAKLLL 496
D GR S+ + + +N D + +L+SA G + E+L +L
Sbjct: 339 DGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEML 393
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/411 (15%), Positives = 170/411 (41%), Gaps = 31/411 (7%)
Query: 38 NQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLFSQMKV 93
N+++ ++V+ R +A ++ M R N S++ +I + C + +L F ++
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 94 L---PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSD 150
L P+ F + L + + + G + +G+ + + ++ +
Sbjct: 170 LGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEI--------- 220
Query: 151 ALSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
+ +++N LI+G + + M+ +G D ++ ++
Sbjct: 221 -------GLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCK 273
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDK----DVIS 266
+ D ++ ++L + + + +I + I+ + + +F + +K +V +
Sbjct: 274 MGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFT 333
Query: 267 WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL 326
+N +I+ F F + ++M+ E I PD TF +++++ +++ +
Sbjct: 334 YNCMIDGFCSFGRWSDAQRLLRDMI-EREINPDVLTFNALISASVKEGKLFEAEKLCDEM 392
Query: 327 FRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISWNTMIAAFGNHGLGERAI 386
+ D +N+++ + K A +F M+ +++++NT+I + + +
Sbjct: 393 LHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVYCRAKRVDEGM 452
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIA-CNHSGMVRKGDLYFNSMEAAYGIAPN 436
++ ++ G+ ++ T+ L+ C + DL F M ++G+ P+
Sbjct: 453 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDL-FQEM-ISHGVCPD 501
>AT1G12775.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4353906-4355840 FORWARD
LENGTH=644
Length = 644
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/406 (20%), Positives = 175/406 (43%), Gaps = 57/406 (14%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERN----TVSWSAMISGYDQCGE 80
+++ G Q + +LN+ K G+ LA ++ M ERN V +S +I G + G
Sbjct: 219 MVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGS 278
Query: 81 HWMALHLFSQMKV--LPNEFVFASTLSA--CASLRALVQGQQIHGLSLRSGYASISFVSN 136
A +LF++M++ + + +TL C + R + + + R ++ S
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFS- 337
Query: 137 SLITMYMKCGQCSDA----LSVYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQE 192
LI ++K G+ +A + + N+++YN+LI GF + + E+ ++ LM+ +
Sbjct: 338 VLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISK 397
Query: 193 GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEV 252
G PD +F N++++ Y + N I++
Sbjct: 398 GCDPDIMTF-----------------------------------NILINGYCKANRIDDG 422
Query: 253 VRVFRLIQDKDVI----SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILA 308
+ +FR + + VI ++NTL+ F + F+EM++ +RPD ++ +L
Sbjct: 423 LELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSR-RVRPDIVSYKILLD 481
Query: 309 SCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI- 367
+ +I + +++ D+G++ +++ + A +F + + +
Sbjct: 482 GLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKL 541
Query: 368 ---SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
++N MI+ +A +F +M EG PD +T+ L+ A
Sbjct: 542 DARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRA 587
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/450 (21%), Positives = 176/450 (39%), Gaps = 84/450 (18%)
Query: 12 RCSK-TMTFGLHAAVLKIGLQSHVFVSNQLLN-MYVKCGRVVLARKVFDGMSE----RNT 65
RC K + F ++K+G + + N LLN + ++C RV A ++ D M E
Sbjct: 135 RCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLEC-RVSEALELVDRMVEMGHKPTL 193
Query: 66 VSWSAMISGYDQCGEHWMALHLFSQM---KVLPNEFVFASTLSA-CASLRALVQGQQIHG 121
++ + +++G G+ A+ L +M PNE + L+ C S GQ
Sbjct: 194 ITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS------GQTALA 247
Query: 122 LSLRSGYASISFVSNSLITMYMKCGQCSDALSVYANSVGTNSVSYNALISGFVENHEPEK 181
+ L + ++ ++V Y+ +I G ++ +
Sbjct: 248 MELLR--------------------------KMEERNIKLDAVKYSIIIDGLCKDGSLDN 281
Query: 182 GFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMS 241
F +F M +GF D ++ L+G N + G L +K + +P
Sbjct: 282 AFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKI--SP-------- 331
Query: 242 MYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDF 301
+V++++ LI++F ++ KEMM I P+
Sbjct: 332 ---------------------NVVTFSVLIDSFVKEGKLREADQLLKEMMQR-GIAPNTI 369
Query: 302 TFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM 361
T+ S++ Q+ + D+ N L+N Y K I ++F +M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429
Query: 362 SYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMV 417
S R N +++NT++ F G E A ++F++M + V+PD V++ LL +G +
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489
Query: 418 RK-----GDLYFNSMEAAYGIAPNIGHFSC 442
K G + + ME GI I H C
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMC 519
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 100/218 (45%), Gaps = 8/218 (3%)
Query: 249 IEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL- 307
+E V R+ + +I+ NTL+N + + M+ E +P++ T+ +L
Sbjct: 178 LELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMV-ETGFQPNEVTYGPVLN 236
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR--- 364
C + L + + R + D ++ +++ K GS+ A +F++M +
Sbjct: 237 VMCKSGQTALAMELLRKMEERNIK-LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFK 295
Query: 365 -NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLY 423
++I++NT+I F N G + ++ M + P+ VTF+ L+ + G +R+ D
Sbjct: 296 ADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQL 355
Query: 424 FNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYIN 461
M GIAPN ++ LID + RL E + ++
Sbjct: 356 LKEM-MQRGIAPNTITYNSLIDGFCKENRLEEAIQMVD 392
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/222 (22%), Positives = 97/222 (43%), Gaps = 18/222 (8%)
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
++ +L + D + +NTL+N + + L + M E +P T +++ +
Sbjct: 148 KIMKLGYEPDTVIFNTLLNGLC-LECRVSEALELVDRMVEMGHKPTLITLNTLV-----N 201
Query: 314 ASFLHGKQIHAFLFRTR------QYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL- 366
L+GK A + R Q +V + ++N+ K G A ++ KM RN+
Sbjct: 202 GLCLNGKVSDAVVLIDRMVETGFQPNEV-TYGPVLNVMCKSGQTALAMELLRKMEERNIK 260
Query: 367 ---ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLY 423
+ ++ +I G + A +F +M+ +G K D +T+ L+ ++G G
Sbjct: 261 LDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKL 320
Query: 424 FNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHH 465
M I+PN+ FS LID + G+L E ++ + +
Sbjct: 321 LRDM-IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
>AT3G22470.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:7966066-7967925 REVERSE
LENGTH=619
Length = 619
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 195/463 (42%), Gaps = 30/463 (6%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSE----RNTVSWSAMISG 74
F + K+G + + L+N + GRV A + D M E + V+ S +I+G
Sbjct: 125 FSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLING 184
Query: 75 YDQCGEHWMALHLFSQM---KVLPNEFVFASTLSACA----SLRALVQGQQIHGLSLRSG 127
G AL L +M P+E + L+ S AL +++ ++++
Sbjct: 185 LCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKAS 244
Query: 128 YASISFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGF 183
S V +SL K G DALS++ + + V+Y++LI G + + + G
Sbjct: 245 VVQYSIVIDSLC----KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGA 300
Query: 184 EVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMY 243
++ + M+ +PD +F L+ L+ + + + + N ++ +
Sbjct: 301 KMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGF 360
Query: 244 AQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPD 299
+ N + E ++F L+ K D+++++ LIN++ F+E+ ++ I P+
Sbjct: 361 CKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLI-PN 419
Query: 300 DFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFS 359
T+ +++ K++ + V + L++ G + A ++F
Sbjct: 420 TITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFE 479
Query: 360 KMSYRNLI----SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSG 415
KM + +N +I N + A +F + +GVKPD VT+ ++ G
Sbjct: 480 KMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKG 539
Query: 416 MVRKGDLYFNSMEAAYGIAPNIGHFSCLIDM-LGRAGRLSEVE 457
+ + D+ F M+ G P+ ++ LI LG +G +S VE
Sbjct: 540 SLSEADMLFRKMKED-GCTPDDFTYNILIRAHLGGSGLISSVE 581
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/447 (20%), Positives = 183/447 (40%), Gaps = 58/447 (12%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS-----ERNTVSWSAMISGYDQCGEHWM 83
G++ ++ ++N Y + +++ A V G + E +T+++S +++G+ G
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVL-GRAWKLGYEPDTITFSTLVNGFCLEGRVSE 158
Query: 84 ALHLFS---QMKVLPNEFVFASTLSACASLRALV-QGQQIHGLSLRSGYASISFVSNSLI 139
A+ L +MK P + V STL L+ V + + + G+ ++
Sbjct: 159 AVALVDRMVEMKQRP-DLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVL 217
Query: 140 TMYMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFV 195
K G + AL ++ ++ + V Y+ +I ++ + +F M +G
Sbjct: 218 NRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIK 277
Query: 196 PDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRV 255
D ++ L+G N + G + +IG I+
Sbjct: 278 ADVVTYSSLIGGLCNDGKWDDGAKM----------LREMIGRNIIP-------------- 313
Query: 256 FRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIR---PDDFTFASILASCTW 312
DV++++ LI+ F +GK L KE+ NE R PD T+ S++
Sbjct: 314 -------DVVTFSALIDVFVK---EGK-LLEAKELYNEMITRGIAPDTITYNSLIDGFCK 362
Query: 313 HASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLIS 368
Q+ + D+ ++ L+N Y K + ++F ++S + N I+
Sbjct: 363 ENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTIT 422
Query: 369 WNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSME 428
+NT++ F G A E+F++M + GV P VT+ LL +G + K F M+
Sbjct: 423 YNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQ 482
Query: 429 AAYGIAPNIGHFSCLIDMLGRAGRLSE 455
+ + IG ++ +I + A ++ +
Sbjct: 483 KSR-MTLGIGIYNIIIHGMCNASKVDD 508
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 16/219 (7%)
Query: 254 RVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
R ++L + D I+++TL+N F + + + + M E RPD T ++++ +
Sbjct: 130 RAWKLGYEPDTITFSTLVNGFC-LEGRVSEAVALVDRMVEMKQRPDLVTVSTLI-----N 183
Query: 314 ASFLHGKQIHAFLFRTRQYW-----DVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNL-- 366
L G+ A + R D + ++N K G+ A +F KM RN+
Sbjct: 184 GLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKA 243
Query: 367 --ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYF 424
+ ++ +I + G + A+ +F +M+ +G+K D VT++ L+ + G G
Sbjct: 244 SVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKML 303
Query: 425 NSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKF 463
M I P++ FS LID+ + G+L E +E N+
Sbjct: 304 REM-IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEM 341
>AT1G73710.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:27721190-27724165 FORWARD
LENGTH=991
Length = 991
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 101/451 (22%), Positives = 180/451 (39%), Gaps = 56/451 (12%)
Query: 136 NSLITMYMKCGQCSDALSVYA----NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQ 191
N+LI +Y K G+ +DA ++++ + V ++V++N +I + + + K M +
Sbjct: 309 NTLIDLYGKAGRLNDAANLFSEMLKSGVPIDTVTFNTMIHTCGTHGHLSEAESLLKKMEE 368
Query: 192 EGFVPDRFSFVGLLGFSTNLDDFRTGMS--------------------LH--CQAVKLAL 229
+G PD ++ LL + D + LH CQ K+
Sbjct: 369 KGISPDTKTYNILLSLHADAGDIEAALEYYRKIRKVGLFPDTVTHRAVLHILCQR-KMVA 427
Query: 230 DCTPLIGN--------------VIMSMYAQFNFIEEVVRVFRLIQDKDVISWNTLINAFS 275
+ +I VIM MY + + +F Q V+S TL
Sbjct: 428 EVEAVIAEMDRNSIRIDEHSVPVIMQMYVNEGLVVQAKALFERFQLDCVLSSTTLAAVID 487
Query: 276 HFDDQG---KSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFL-FRTRQ 331
+ ++G ++ F N R D + ++ + + + LH K + F + +
Sbjct: 488 VYAEKGLWVEAETVFYGKRNMSGQRNDVLEYNVMIKA--YGKAKLHEKALSLFKGMKNQG 545
Query: 332 YW-DVGVHNALVNMYAKCGSIGYAHKVFSKM----SYRNLISWNTMIAAFGNHGLGERAI 386
W D +N+L M A + A ++ ++M ++ MIA++ GL A+
Sbjct: 546 TWPDECTYNSLFQMLAGVDLVDEAQRILAEMLDSGCKPGCKTYAAMIASYVRLGLLSDAV 605
Query: 387 EIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDM 446
+++E M+ GVKP+ V + L+ SGMV + YF ME +G+ N + LI
Sbjct: 606 DLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMME-EHGVQSNHIVLTSLIKA 664
Query: 447 LGRAGRLSEVEEYINKFHHLN---DPVVLGSLLSACRVHGNMAIGERLAKLLLEVPPVTT 503
+ G L E +K D S+LS C G ++ E + L E
Sbjct: 665 YSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIVSEAESIFNALREKGTCDV 724
Query: 504 SPYVLLSNLYASDGMWNEVTSARKMLKGSGL 534
+ + LY GM +E + ++ SGL
Sbjct: 725 ISFATMMYLYKGMGMLDEAIEVAEEMRESGL 755
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/328 (19%), Positives = 143/328 (43%), Gaps = 16/328 (4%)
Query: 164 VSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQ 223
+ YN +I + + EK +FK M +G PD ++ L +D + +
Sbjct: 516 LEYNVMIKAYGKAKLHEKALSLFKGMKNQGTWPDECTYNSLFQMLAGVDLVDEAQRILAE 575
Query: 224 AVKLALDCTPLIGN--VIMSMYAQFNFIEEVVRVFRLIQDKDV----ISWNTLINAFSHF 277
L C P +++ Y + + + V ++ ++ V + + +LIN F+
Sbjct: 576 M--LDSGCKPGCKTYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAES 633
Query: 278 DDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGV 337
++ +F+ MM E ++ + S++ + + ++++ + + DV
Sbjct: 634 GMVEEAIQYFR-MMEEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAA 692
Query: 338 HNALVNMYAKCGSIGYAHKVFSKMSYR---NLISWNTMIAAFGNHGLGERAIEIFEQMKA 394
N+++++ A G + A +F+ + + ++IS+ TM+ + G+ + AIE+ E+M+
Sbjct: 693 SNSMLSLCADLGIVSEAESIFNALREKGTCDVISFATMMYLYKGMGMLDEAIEVAEEMRE 752
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAG--- 451
G+ D +F ++ G + + F+ M + + G F L +L + G
Sbjct: 753 SGLLSDCTSFNQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVPS 812
Query: 452 -RLSEVEEYINKFHHLNDPVVLGSLLSA 478
+S+++ N+ L P + +L SA
Sbjct: 813 EAVSQLQTAYNEAKPLATPAITATLFSA 840
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 149/375 (39%), Gaps = 56/375 (14%)
Query: 67 SWSAMISGYDQCGEHWMALHLFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLS 123
+++AMI+ Y + G A+ L+ M+ V PNE V+ S ++ A + + Q +
Sbjct: 587 TYAAMIASYVRLGLLSDAVDLYEAMEKTGVKPNEVVYGSLINGFAESGMVEEAIQYFRMM 646
Query: 124 LRSGYASISFVSNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNALIS-----GFV 174
G S V SLI Y K G +A VY + G + + N+++S G V
Sbjct: 647 EEHGVQSNHIVLTSLIKAYSKVGCLEEARRVYDKMKDSEGGPDVAASNSMLSLCADLGIV 706
Query: 175 ENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLAL----- 229
E +F + ++G D SF ++ GM + +A+++A
Sbjct: 707 SEAE-----SIFNALREKGTC-DVISFATMMY-------LYKGMGMLDEAIEVAEEMRES 753
Query: 230 ----DCTPLIGNVIMSMYAQFNFIEEVVRVFR--LIQDKDVISWNTLINAFSHFDDQGKS 283
DCT N +M+ YA + E +F L++ K ++ W T F+ G
Sbjct: 754 GLLSDCTSF--NQVMACYAADGQLSECCELFHEMLVERKLLLDWGTFKTLFTLLKKGGVP 811
Query: 284 FLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVG------- 336
++ + A LA+ A+ ++A+ + Q G
Sbjct: 812 SEAVSQLQTA-------YNEAKPLATPAITATLFSAMGLYAYALESCQELTSGEIPREHF 864
Query: 337 VHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQM 392
+NA++ Y+ G I A K + +M + ++++ ++ +G G+ E + ++
Sbjct: 865 AYNAVIYTYSASGDIDMALKAYMRMQEKGLEPDIVTQAYLVGIYGKAGMVEGVKRVHSRL 924
Query: 393 KAEGVKPDSVTFTGL 407
++P F +
Sbjct: 925 TFGELEPSQSLFKAV 939
>AT5G55840.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr5:22598038-22601688 FORWARD
LENGTH=1136
Length = 1136
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 95/511 (18%), Positives = 206/511 (40%), Gaps = 36/511 (7%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRV----VLARKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
G+ + V N L++ + R+ +L R + M N V+++ +I+G+ G+ +A
Sbjct: 298 GVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIA 357
Query: 85 LHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
L ++M + PN F + + S + ++ + G L+
Sbjct: 358 SQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDG 417
Query: 142 YMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPD 197
K + A Y N V ++Y +I G +N ++ + M ++G PD
Sbjct: 418 LCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPD 477
Query: 198 RFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFR 257
++ L+ + F+T + C+ ++ L +I + ++ + ++E +R++
Sbjct: 478 IVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYE 537
Query: 258 LI----QDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWH 313
+ +D ++N L+ + ++ F + M ++ I P+ +F ++
Sbjct: 538 AMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSD-GILPNTVSFDCLINGYGNS 596
Query: 314 ASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKM----SYRNLISW 369
L + + + + + +L+ K G + A K + + + + +
Sbjct: 597 GEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGD-----LYF 424
NT++ A G +A+ +F +M + PDS T+T L+ SG+ RKG L+
Sbjct: 657 NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI-----SGLCRKGKTVIAILFA 711
Query: 425 NSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE---VEEYINKFHHLNDPVVLGSLLSACRV 481
EA + PN ++C +D + +AG+ E ++ H D V +++
Sbjct: 712 KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDG--- 768
Query: 482 HGNMAIGERLAKLLLEVPPVTTSPYVLLSNL 512
+ M E+ LL E+ P + N+
Sbjct: 769 YSRMGKIEKTNDLLPEMGNQNGGPNLTTYNI 799
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 100/470 (21%), Positives = 196/470 (41%), Gaps = 37/470 (7%)
Query: 13 CSKTMTFGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSW 68
C K A +L+ + H F N L+ K G+V A + M+ NTVS+
Sbjct: 528 CLKEAIRIYEAMILEGHTRDH-FTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586
Query: 69 SAMISGYDQCGEHWMALHLFSQMKVL---PNEFVFASTLSACASLRALVQGQQIHGLSLR 125
+I+GY GE A +F +M + P F + S L L + ++ SL
Sbjct: 587 DCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLK-SLH 645
Query: 126 SGYASISFVS-NSLITMYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPE 180
+ A++ V N+L+T K G + A+S++ S+ +S +Y +LISG
Sbjct: 646 AVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCR----- 700
Query: 181 KGFEVFKLMLQE------GFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTPL 234
KG V ++ + +P++ + + ++ G+ Q L +
Sbjct: 701 KGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIV 760
Query: 235 IGNVIMSMYAQFNFIEEVVRVFRLIQDKD----VISWNTLINAFSHFDDQGKSFLFFKEM 290
N ++ Y++ IE+ + + +++ + ++N L++ +S D SFL ++ +
Sbjct: 761 TTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSI 820
Query: 291 MNECSIRPDDFTFAS-ILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCG 349
+ I PD T S +L C + + K + AF+ R + D N L++ G
Sbjct: 821 ILN-GILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEV-DRYTFNMLISKCCANG 878
Query: 350 SIGYAHKVFSKMSYRNLI----SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFT 405
I +A + M+ + + + M++ + + + + +M +G+ P+S +
Sbjct: 879 EINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYI 938
Query: 406 GLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSE 455
GL+ G ++ + M A PN+ S ++ L + G+ E
Sbjct: 939 GLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKADE 987
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 160/388 (41%), Gaps = 32/388 (8%)
Query: 122 LSLRSGYASISF---------------VSNSLITMYMKCGQCSDALSVYA--NSVGTNSV 164
LSL SG +S F V + LI +Y++ G D+L ++ G N
Sbjct: 138 LSLMSGKSSFVFGALMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPS 197
Query: 165 SY--NALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHC 222
Y NA++ V++ E + K ML+ PD +F L+ F L
Sbjct: 198 VYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQ 257
Query: 223 QAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQ----DKDVISWNTLINAFSHFD 278
+ K T + N ++ Y + + + + ++ D DV ++N LI+ +
Sbjct: 258 KMEKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSN 317
Query: 279 DQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVH 338
K +L ++M I P++ T+ +++ + L Q+ + +
Sbjct: 318 RIAKGYLLLRDMRKR-MIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTF 376
Query: 339 NALVNMYAKCGSIGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKA 394
NAL++ + G+ A K+F M + L +S+ ++ + + A + +MK
Sbjct: 377 NALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKR 436
Query: 395 EGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLS 454
GV +T+TG++ +G + + + N M GI P+I +S LI+ + GR
Sbjct: 437 NGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKD-GIDPDIVTYSALINGFCKVGRFK 495
Query: 455 EVEEYINKFHHLN---DPVVLGSLLSAC 479
+E + + + + + ++ +L+ C
Sbjct: 496 TAKEIVCRIYRVGLSPNGIIYSTLIYNC 523
>AT1G74580.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:28020777-28023068 FORWARD
LENGTH=763
Length = 763
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 109/502 (21%), Positives = 204/502 (40%), Gaps = 36/502 (7%)
Query: 31 QSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALH 86
+ VF N ++++ V G A KV+ M +R + S++ + + + AL
Sbjct: 108 EPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALR 167
Query: 87 LFSQMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYM 143
L + M N + + + +G ++ G L SG + N L+ +
Sbjct: 168 LLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLC 227
Query: 144 KCG---QCSDALS-VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRF 199
K G +C L V V N +YN I G + E + + ++++G PD
Sbjct: 228 KKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVI 287
Query: 200 SFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRL 258
++ L+ G N F+ + V L+ N +++ Y + ++ R+
Sbjct: 288 TYNNLIYGLCKN-SKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERI--- 343
Query: 259 IQD-------KDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCT 311
+ D D ++ +LI+ H + ++ F E + + I+P+ + +++ +
Sbjct: 344 VGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGK-GIKPNVILYNTLIKGLS 402
Query: 312 WHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSI----GYAHKVFSKMSYRNLI 367
L Q+ + +V N LVN K G + G + SK + ++
Sbjct: 403 NQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIF 462
Query: 368 SWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA-CNHSGMVRKGDLYFNS 426
++N +I + E A+EI + M GV PD T+ LL C S + Y
Sbjct: 463 TFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTM 522
Query: 427 MEAAYGIAPNIGHFSCLIDMLGRAGRLSE----VEEYINKFHHLNDPVVLGSLLSACRVH 482
+E G APN+ F+ L++ L R +L E +EE NK + D V G+L+ +
Sbjct: 523 VEK--GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVN-PDAVTFGTLIDGFCKN 579
Query: 483 GNMAIGERLAKLLLEVPPVTTS 504
G++ L + + E V++S
Sbjct: 580 GDLDGAYTLFRKMEEAYKVSSS 601
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/396 (20%), Positives = 163/396 (41%), Gaps = 25/396 (6%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARK-----VFDGMSERNTVSWSAMISGYDQCGEHWM 83
GL+ + N L+ Y K G V LA + VF+G + ++ ++I G GE
Sbjct: 316 GLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVP-DQFTYRSLIDGLCHEGETNR 374
Query: 84 ALHLFSQM---KVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
AL LF++ + PN ++ + + ++ +++ Q+ G N L+
Sbjct: 375 ALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVN 434
Query: 141 MYMKCGQCSDALSVYANSVG----TNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
K G SDA + + + ++N LI G+ + E E+ +ML G P
Sbjct: 435 GLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDP 494
Query: 197 DRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALDCTP--LIGNVIMSMYAQFNFIEEVVR 254
D +++ LL F M + V+ C P N+++ ++ ++E +
Sbjct: 495 DVYTYNSLLNGLCKTSKFEDVMETYKTMVEKG--CAPNLFTFNILLESLCRYRKLDEALG 552
Query: 255 VFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASC 310
+ +++K D +++ TLI+ F D ++ F++M + T+ I+ +
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612
Query: 311 TWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLI-SW 369
T + +++ + D + +V+ + K G++ +K +M I S
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672
Query: 370 NTMIAAFGNHGLGERAIE---IFEQMKAEGVKPDSV 402
T+ + +R E I +M +G+ P++V
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/370 (20%), Positives = 154/370 (41%), Gaps = 25/370 (6%)
Query: 93 VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDAL 152
VLPN F + + L ++ G + G N+LI K + +A
Sbjct: 247 VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEA- 305
Query: 153 SVYA-----NSVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGF 207
VY + +S +YN LI+G+ + + + + GFVPD+F++ L+
Sbjct: 306 EVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDG 365
Query: 208 STNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDVI-- 265
+ + ++L +A+ + ++ N ++ + I E ++ + +K +I
Sbjct: 366 LCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPE 425
Query: 266 --SWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
++N L+N + K M+++ PD FTF ++ + + +I
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISK-GYFPDIFTFNILIHGYSTQLKMENALEIL 484
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNH 379
+ DV +N+L+N K + + M + NL ++N ++ + +
Sbjct: 485 DVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRY 544
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDL-----YFNSMEAAYGIA 434
+ A+ + E+MK + V PD+VTF L+ G + GDL F ME AY ++
Sbjct: 545 RKLDEALGLLEEMKNKSVNPDAVTFGTLI-----DGFCKNGDLDGAYTLFRKMEEAYKVS 599
Query: 435 PNIGHFSCLI 444
+ ++ +I
Sbjct: 600 SSTPTYNIII 609
>AT5G12100.1 | Symbols: | pentatricopeptide (PPR) repeat-containing
protein | chr5:3911388-3913838 FORWARD LENGTH=816
Length = 816
Score = 85.5 bits (210), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 101/485 (20%), Positives = 205/485 (42%), Gaps = 26/485 (5%)
Query: 34 VFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGEHWMALHLFS 89
VF+ N L++ K R+ A ++FD M R + ++++ +I GY + G + +
Sbjct: 214 VFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRE 273
Query: 90 QMK---VLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCG 146
+MK + P+ F + L + + + G+ +F + L Y
Sbjct: 274 RMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNE 333
Query: 147 QCSDALSVYANSVGT----NSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFV 202
+ AL VY +V + N+ + + L++ + + EK E+ + +G VP+ +
Sbjct: 334 KAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYN 393
Query: 203 GLLGFSTNLDDFRTGMSLHCQAV-KLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQD 261
++ D G + +A+ K + L N ++ + + +E + ++
Sbjct: 394 TMIDGYCRKGDL-VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKL 452
Query: 262 K----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFL 317
K V ++N LI + + K F KEM + ++ P+ ++ +++ +C S L
Sbjct: 453 KGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTM-PNVVSYGTLI-NCLCKGSKL 510
Query: 318 HGKQIHAFLFRTRQYW-DVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTM 372
QI R V ++N L++ G I A + +M + NL+++NT+
Sbjct: 511 LEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTL 570
Query: 373 IAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYG 432
I G A ++ ++ +G+KPD T+ L+ +G V++ + M+ + G
Sbjct: 571 IDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRS-G 629
Query: 433 IAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLNDPVVLGSLLSACRVHGNMAIGERLA 492
I P + + LI + + G + E + D +V +L VHG+M L
Sbjct: 630 IKPTLKTYHLLISLCTKEG-IELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQ 688
Query: 493 KLLLE 497
K ++E
Sbjct: 689 KQMIE 693
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 5/157 (3%)
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
E RP F + + + + G ++ + R Y V ++N L++ K +
Sbjct: 172 ESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMN 231
Query: 353 YAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
A ++F +M R +LI++NT+I + G E++ ++ E+MKA+ ++P +TF LL
Sbjct: 232 DAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLL 291
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLID 445
+GMV + M+ G P+ FS L D
Sbjct: 292 KGLFKAGMVEDAENVLKEMK-DLGFVPDAFTFSILFD 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/411 (20%), Positives = 176/411 (42%), Gaps = 59/411 (14%)
Query: 19 FGLHAAVLKIGLQSHVFVSNQLLNMYVKCGRV-----VLARKVFDGMSERNTVSWSAMIS 73
G++ + G++ + + + LLN K G++ +L R++ G+ N V ++ MI
Sbjct: 339 LGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVP-NEVIYNTMID 397
Query: 74 GYDQCGEHWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISF 133
GY + G+ A +MK+ E + G
Sbjct: 398 GYCRKGDLVGA-----RMKIEAME---------------------------KQGMKPDHL 425
Query: 134 VSNSLITMYMKCGQCSDALS----VYANSVGTNSVSYNALISGFVENHEPEKGFEVFKLM 189
N LI + + G+ +A + V + +YN LI G+ +E +K F++ K M
Sbjct: 426 AYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEM 485
Query: 190 LQEGFVPDRFSFVGLLGFSTNLDDFRTGMSLHCQAVKLALD---CTP--LIGNVIMSMYA 244
G +P+ S+ L+ + L Q VK ++ +P I N+++
Sbjct: 486 EDNGTMPNVVSYGTLINCLC-----KGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCC 540
Query: 245 QFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDD 300
IE+ R + + K +++++NTLI+ S ++ E+ + ++PD
Sbjct: 541 SKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRK-GLKPDV 599
Query: 301 FTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSK 360
FT+ S+++ + + ++ + R+ + ++ L+++ K G I ++F +
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-IELTERLFGE 658
Query: 361 MSYR-NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIA 410
MS + +L+ +N ++ + HG E+A + +QM + + D T+ L++
Sbjct: 659 MSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILG 709
>AT3G18110.1 | Symbols: EMB1270 | Pentatricopeptide repeat (PPR)
superfamily protein | chr3:6204940-6209691 REVERSE
LENGTH=1440
Length = 1440
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 121/247 (48%), Gaps = 15/247 (6%)
Query: 224 AVKLALDCTPLIG------NVIMSMYA---QFNFIEEVVRVFRLIQ-DKDVISWNTLINA 273
AV++ P +G N +M +Y+ +F+ +E+V R D+IS+NTLINA
Sbjct: 210 AVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINA 269
Query: 274 FSHFDDQGKSF-LFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQY 332
+ + +M+ +RPD T+ ++L++C+ ++ ++ + R
Sbjct: 270 RLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQ 329
Query: 333 WDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNHGLGERAIEI 388
D+ +NA++++Y +CG A ++F ++ + + +++N+++ AF E+ E+
Sbjct: 330 PDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEV 389
Query: 389 FEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLG 448
++QM+ G D +T+ ++ G + + M+ G P+ ++ LID LG
Sbjct: 390 YQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLG 449
Query: 449 RAGRLSE 455
+A R E
Sbjct: 450 KANRTVE 456
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 160/378 (42%), Gaps = 55/378 (14%)
Query: 134 VSNSLITMYMKCGQCSDAL----SVYANSVGTNSVSYNALISGFVENH--EPEKGFEVFK 187
V N+++ +Y + G+ S A ++ + +S+N LI+ +++ P E+
Sbjct: 227 VYNAMMGVYSRSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD 286
Query: 188 LMLQEGFVPDRFSFVGLLGF---STNLDDFRTGMSLHCQAVKLALD-----CTPLIG--N 237
++ G PD ++ LL +NLD AVK+ D C P + N
Sbjct: 287 MVRNSGLRPDAITYNTLLSACSRDSNLDG----------AVKVFEDMEAHRCQPDLWTYN 336
Query: 238 VIMSMYAQFNFIEEVVRVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNE 293
++S+Y + E R+F ++ K D +++N+L+ AF+ + K +++M +
Sbjct: 337 AMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQM-QK 395
Query: 294 CSIRPDDFTFASILASCTWHASFLHGKQ----IHAFLFR-----TRQYWDVGVHNALVNM 344
D+ T+ +I+ ++GKQ + L++ + + D + L++
Sbjct: 396 MGFGKDEMTYNTII--------HMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 345 YAKCGSIGYAHKVFSKM----SYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPD 400
K A + S+M L +++ +I + G E A + F M G KPD
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 401 SVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYI 460
++ ++ +L RK + M + G P+ + +I L + R ++++ I
Sbjct: 508 NLAYSVMLDVLLRGNETRKAWGLYRDM-ISDGHTPSYTLYELMILGLMKENRSDDIQKTI 566
Query: 461 NKFHHL--NDPVVLGSLL 476
L +P+ + S+L
Sbjct: 567 RDMEELCGMNPLEISSVL 584
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 85/189 (44%), Gaps = 12/189 (6%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMS----ERNTVSWSAMISGYDQCGEHWMA 84
GL+ N LL+ + + A KVF+ M + + +++AMIS Y +CG A
Sbjct: 292 GLRPDAITYNTLLSACSRDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEA 351
Query: 85 LHLFSQMKV---LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITM 141
LF ++++ P+ + S L A A R + ++++ + G+ N++I M
Sbjct: 352 ERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHM 411
Query: 142 YMKCGQCSDALSVYANSVG-----TNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
Y K GQ AL +Y + G ++++Y LI + + + + ML G P
Sbjct: 412 YGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP 471
Query: 197 DRFSFVGLL 205
++ L+
Sbjct: 472 TLQTYSALI 480
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 131/310 (42%), Gaps = 18/310 (5%)
Query: 237 NVIMSMYAQFNFIEEVVRVFR-LIQD---KDVISWNTLINAFSHFDDQGKSFLFFKEMMN 292
N +MS YAQ E +F +++D V S N L++A D + + E +
Sbjct: 791 NSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALC-VDGRLEELYVVVEELQ 849
Query: 293 ECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIG 352
+ + + +L + + K+I++ + + ++ ++ + K +
Sbjct: 850 DMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGKRVR 909
Query: 353 YAHKVFSKMSYRN----LISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLL 408
A + S+M N L WN+M+ + ++ +++++++K G++PD T+ L+
Sbjct: 910 DAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLI 969
Query: 409 IACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEV----EEYINKFH 464
I +G L M G+ P + + LI G+ L + EE ++K
Sbjct: 970 IMYCRDRRPEEGYLLMQQMR-NLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGL 1028
Query: 465 HLNDPVVLGSLLSACRVHGNMAIGERLAKLLLE--VPPVTTSPYVLLSNLYASDGMWNEV 522
L D +++ R G+ + E+L +++ + P + ++L+ + Y+S G E
Sbjct: 1029 KL-DRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS-YSSSGNPQEA 1086
Query: 523 TSARKMLKGS 532
LK +
Sbjct: 1087 EKVLSNLKDT 1096
>AT1G13800.1 | Symbols: | Tetratricopeptide repeat (TPR)-like
superfamily protein | chr1:4731056-4733707 REVERSE
LENGTH=883
Length = 883
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/424 (20%), Positives = 160/424 (37%), Gaps = 56/424 (13%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSERNTVSWSAMISGYDQCGEHWMALHLF 88
G++ N ++ + G + A ++ + ++ + ++M+ G+ G A F
Sbjct: 496 GVKPTYVTHNMVIEGLIDAGELDKAEAFYESLEHKSRENDASMVKGFCAAGCLDHAFERF 555
Query: 89 SQMKV-LPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQ 147
+++ LP F S CA + + Q + + G + LI + +
Sbjct: 556 IRLEFPLPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNN 615
Query: 148 CSDALSVYANSVGTNSV----SYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVG 203
A + V V +Y +I+ + +EP++ + +F+ M + PD ++
Sbjct: 616 VRKAREFFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSV 675
Query: 204 LLGFSTNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKD 263
LL LD + M A D P D
Sbjct: 676 LLNSDPELD-MKREME--------AFDVIP-----------------------------D 697
Query: 264 VISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILASCTWHASFLHGKQIH 323
V+ + +IN + H +D K + FK+M I PD T+ +L + +++
Sbjct: 698 VVYYTIMINRYCHLNDLKKVYALFKDMKRR-EIVPDVVTYTVLLKNKPERN---LSREMK 753
Query: 324 AFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR----NLISWNTMIAAFGNH 379
AF + DV + L++ K G +G A ++F +M + + +IA
Sbjct: 754 AFDVKP----DVFYYTVLIDWQCKIGDLGEAKRIFDQMIESGVDPDAAPYTALIACCCKM 809
Query: 380 GLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGH 439
G + A IF++M GVKPD V +T L+ C +G V K M GI P
Sbjct: 810 GYLKEAKMIFDRMIESGVKPDVVPYTALIAGCCRNGFVLKAVKLVKEM-LEKGIKPTKAS 868
Query: 440 FSCL 443
S +
Sbjct: 869 LSAV 872
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/416 (18%), Positives = 160/416 (38%), Gaps = 68/416 (16%)
Query: 95 PNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLITMYMKCGQCSDALSV 154
P+ +V+++ + + + + L+ + +S++ Y + G S+A +
Sbjct: 324 PDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGNFSEAYDL 383
Query: 155 YANSVGTN----SVSYNALISGFVENHEPEKGFEVFKLMLQEGFVPDRFSFVGLLGFSTN 210
+ TN V YN + + E+ E+F+ M +G PD ++ L+G
Sbjct: 384 FKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTTLIGGCCL 443
Query: 211 LDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFNFIEEVVRVFRLIQDKDV----IS 266
L + +I NV+ A +E ++++++ V ++
Sbjct: 444 QGKCSDAFDLMIEMDGTGKTPDIVIYNVLAGGLATNGLAQEAFETLKMMENRGVKPTYVT 503
Query: 267 WNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFAS--ILASCTWHA-------SFL 317
N +I + K+ F++ + E R +D + A C HA F
Sbjct: 504 HNMVIEGLIDAGELDKAEAFYESL--EHKSRENDASMVKGFCAAGCLDHAFERFIRLEFP 561
Query: 318 HGKQIHAFLFRT---------------RQYWDVGV------HNALVNMYAKCGSIGYAHK 356
K ++ LF + + W +GV + L+ + + ++ A +
Sbjct: 562 LPKSVYFTLFTSLCAEKDYISKAQDLLDRMWKLGVEPEKSMYGKLIGAWCRVNNVRKARE 621
Query: 357 VF----SKMSYRNLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACN 412
F +K +L ++ MI + ++A +FE MK VKPD VT++ LL +
Sbjct: 622 FFEILVTKKIVPDLFTYTIMINTYCRLNEPKQAYALFEDMKRRDVKPDVVTYSVLLNSDP 681
Query: 413 HSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEEYINKFHHLND 468
M R+ ME A+ + P++ +++ + IN++ HLND
Sbjct: 682 ELDMKRE-------ME-AFDVIPDVVYYTIM----------------INRYCHLND 713
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 5/172 (2%)
Query: 291 MNECSIRPDDFTFASILASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGS 350
M + I PD + +++I+ + + + + + R+ + + ++++ Y + G+
Sbjct: 317 MEKHGIDPDVYVYSAIIEGHRKNMNIPKAVDVFNKMLKKRKRINCVIVSSILQCYCQMGN 376
Query: 351 IGYAHKVFSKMSYRNL----ISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTG 406
A+ +F + N+ + +N A G G E AIE+F +M +G+ PD + +T
Sbjct: 377 FSEAYDLFKEFRETNISLDRVCYNVAFDALGKLGKVEEAIELFREMTGKGIAPDVINYTT 436
Query: 407 LLIACNHSGMVRKGDLYFNSMEAAYGIAPNIGHFSCLIDMLGRAGRLSEVEE 458
L+ C G M+ G P+I ++ L L G E E
Sbjct: 437 LIGGCCLQGKCSDAFDLMIEMDGT-GKTPDIVIYNVLAGGLATNGLAQEAFE 487
>AT1G12620.1 | Symbols: | Pentatricopeptide repeat (PPR)
superfamily protein | chr1:4294883-4296748 REVERSE
LENGTH=621
Length = 621
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/435 (20%), Positives = 182/435 (41%), Gaps = 83/435 (19%)
Query: 25 VLKIGLQSHVFVSNQLLNMYVKCGRVVLARKVFDGMSER----NTVSWSAMISGYDQCGE 80
+++ G Q + +L + K G+ LA ++ M ER + V +S +I G + G
Sbjct: 203 MVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGS 262
Query: 81 HWMALHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHGLSLRSGYASISFVSNSLIT 140
A +LF++M++ G+ + + +LI
Sbjct: 263 LDNAFNLFNEMEI--------------------------------KGFKADIIIYTTLIR 290
Query: 141 MYMKCGQCSDALSVYAN----SVGTNSVSYNALISGFVENHEPEKGFEVFKLMLQEGFVP 196
+ G+ D + + + + V+++ALI FV+ + + E+ K M+Q G P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350
Query: 197 DRFSFVGLL-GFSTNLDDFRTGMSLHCQAVKLALDCTPLIG--NVIMSMYAQFNFIEEVV 253
D ++ L+ GF + + + H + ++ C P I N++++ Y + N I++ +
Sbjct: 351 DTVTYTSLIDGFCK---ENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407
Query: 254 RVFRLIQDK----DVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASILAS 309
+FR + + D +++NTLI F + F+EM++ +RPD ++ +L
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSR-RVRPDIVSYKILLDG 466
Query: 310 CTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYRNLISW 369
+ +I + +++ D+G++N ++ + C A KV
Sbjct: 467 LCDNGEPEKALEIFEKIEKSKMELDIGIYNIII--HGMCN----ASKV------------ 508
Query: 370 NTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLYFNSMEA 429
+ A ++F + +GVKPD T+ ++ G + + DL F ME
Sbjct: 509 -------------DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEE 555
Query: 430 AYGIAPNIGHFSCLI 444
G +PN ++ LI
Sbjct: 556 D-GHSPNGCTYNILI 569
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/496 (20%), Positives = 189/496 (38%), Gaps = 101/496 (20%)
Query: 29 GLQSHVFVSNQLLNMYVKCGRVVLA----RKVFDGMSERNTVSWSAMISGYDQCGEHWMA 84
G+ +++ + ++N +C ++ LA K+ E +TV++S +I+G G A
Sbjct: 102 GIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEA 161
Query: 85 LHLFSQMKVLPNEFVFASTLSACASLRALVQGQQIHG----------LSLRSGYASISFV 134
L L +M E TL +L ALV G ++G + +G+
Sbjct: 162 LELVDRMV----EMGHKPTL---ITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
Query: 135 SNSLITMYMKCGQCSDALSVY----ANSVGTNSVSYNALISGFVENHEPEKGFEVFKLML 190
++ + K GQ + A+ + + ++V Y+ +I G ++ + F +F M
Sbjct: 215 YGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEME 274
Query: 191 QEGFVPDRFSFVGLL-GF--STNLDDFRTGMSLHCQAVKLALDCTPLIGNVIMSMYAQFN 247
+GF D + L+ GF + DD G L +K + TP
Sbjct: 275 IKGFKADIIIYTTLIRGFCYAGRWDD---GAKLLRDMIKRKI--TP-------------- 315
Query: 248 FIEEVVRVFRLIQDKDVISWNTLINAFSHFDDQGKSFLFFKEMMNECSIRPDDFTFASIL 307
DV++++ LI+ F ++ KEM+ I PD T+ S++
Sbjct: 316 ---------------DVVAFSALIDCFVKEGKLREAEELHKEMIQR-GISPDTVTYTSLI 359
Query: 308 ASCTWHASFLHGKQIHAFLFRTRQYWDVGVHNALVNMYAKCGSIGYAHKVFSKMSYR--- 364
+ + ++ N L+N Y K I ++F KMS R
Sbjct: 360 DGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVV 419
Query: 365 -NLISWNTMIAAFGNHGLGERAIEIFEQMKAEGVKPDSVTFTGLLIACNHSGMVRKGDLY 423
+ +++NT+I F G E A E+F++M + V+PD V++ LL +G K
Sbjct: 420 ADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEI 479
Query: 424 FNSMEAAY----------------------------------GIAPNIGHFSCLIDMLGR 449
F +E + G+ P++ ++ +I L +
Sbjct: 480 FEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCK 539
Query: 450 AGRLSEVEEYINKFHH 465
G LSE + K
Sbjct: 540 KGSLSEADLLFRKMEE 555