Miyakogusa Predicted Gene

Lj4g3v2122840.1
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2122840.1 Non Chatacterized Hit- tr|D8QNT3|D8QNT3_SELML
Putative uncharacterized protein OS=Selaginella moelle,33.05,1e-17,GB
DEF: EXPRESSED PROTEIN (AT2G19080/T20K24.9) (HYPOTHETICAL
PROTEIN),NULL; METAXIN RELATED,NULL; se,CUFF.50295.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G19080.1 | Symbols:  | metaxin-related | chr2:8262818-8264746...   244   4e-65

>AT2G19080.1 | Symbols:  | metaxin-related | chr2:8262818-8264746
           FORWARD LENGTH=315
          Length = 315

 Score =  244 bits (624), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 118/231 (51%), Positives = 154/231 (66%), Gaps = 1/231 (0%)

Query: 6   TLVVRKPCFGLPTGCPQCLSAFIYLKFAQVPFQLDFHLNNPHSDQIPYFEYGDCVAYNNE 65
           TLV RKP F LPT CP CL A+IYLK AQ+PF+L F+   P SD++PYFE    VAYNNE
Sbjct: 11  TLVARKPSFDLPTACPNCLPAYIYLKLAQLPFELAFNSTFPDSDELPYFESDTYVAYNNE 70

Query: 66  KEGIIECXXXXXXXXXXXXXXXXXPDWISTKAVLTTWLADALAFELWIGCESSSAHSIYY 125
             G+IE                   D++S KA++ +WL +AL +E+W+G E  S   IYY
Sbjct: 71  DGGVIE-KLKKDGIVNLDSQLQSLSDYLSLKALIVSWLEEALTYEIWVGTEGISTSKIYY 129

Query: 126 SDLPWPMGRILSQQKARSVKLKLGITDDNAQVKMKEIYGRASSAYEALSNCLGEQNYLFE 185
           SDLPW + ++L  ++    K +LGIT +NA+ + K+IY RAS AYEALS  LGEQ +LFE
Sbjct: 130 SDLPWVISKVLFYKQTYLAKNRLGITKENAEQREKQIYKRASEAYEALSTRLGEQKFLFE 189

Query: 186 NRPSSLDAIFLAHGLIVLQALPESSMMRINFLEHPNLVRYVEHCKTEIIEA 236
           +RPSSLDA  L+H L ++QALP +S++R   LEH NLVRY E  K+E +EA
Sbjct: 190 DRPSSLDAFLLSHILFIIQALPVTSVLRCKLLEHSNLVRYAEKLKSEFLEA 240