Miyakogusa Predicted Gene

Lj4g3v2120640.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120640.1 tr|B9HP49|B9HP49_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1088155 PE=4
SV=1,35.23,3e-18,VHP,Villin headpiece; HP,Villin headpiece; VILLIN
1-4,NULL; VILLIN,Gelsolin; VHP, Villin headpiece d,CUFF.50287.1
         (188 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30160.2 | Symbols: VLN4 | villin 4 | chr4:14754528-14759511 ...   216   6e-57
AT4G30160.1 | Symbols: VLN4, ATVLN4 | villin 4 | chr4:14754528-1...   216   6e-57
AT5G57320.1 | Symbols: VLN5 | villin, putative | chr5:23212690-2...   176   9e-45
AT2G29890.3 | Symbols: VLN1 | villin-like 1 | chr2:12744597-1274...    84   5e-17
AT2G29890.2 | Symbols: VLN1, ATVLN1 | villin-like 1 | chr2:12744...    84   5e-17
AT2G29890.1 | Symbols: VLN1, ATVLN1 | villin-like 1 | chr2:12744...    84   5e-17
AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 | chr2:17410962-1...    69   2e-12
AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 | chr3:21243615-2...    64   4e-11

>AT4G30160.2 | Symbols: VLN4 | villin 4 | chr4:14754528-14759511
           FORWARD LENGTH=983
          Length = 983

 Score =  216 bits (551), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 118/202 (58%), Positives = 144/202 (71%), Gaps = 15/202 (7%)

Query: 1   MSVSPDRVRVRGRSPAFNALAANFENTNARNLSTPPPIIRKLYPKSMSPDTAKLGP--KS 58
           MS SPDRVRVRGRSPAFNALAA FE+ NARNLSTPPP++RKLYP+S++PD++K  P  KS
Sbjct: 783 MSFSPDRVRVRGRSPAFNALAATFESQNARNLSTPPPVVRKLYPRSVTPDSSKFAPAPKS 842

Query: 59  SAIASISSTFEPPSAREKLIPRSLKAS------------SGASKSDPEISEKDDSMSSTT 106
           SAIAS S+ FE    +E  IP+ +KAS            S   +   E  +++ SMSS  
Sbjct: 843 SAIASRSALFEKIPPQEPSIPKPVKASPKTPESPAPESNSKEQEEKKENDKEEGSMSSRI 902

Query: 107 ESPNVQGDVKEGEAEDDEGLPVYPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMT 166
           ES  +Q D KEG  ED+E LP +PY+ + T STDP +DIDVT+REAYLS EEF++  GMT
Sbjct: 903 ESLTIQEDAKEG-VEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMT 961

Query: 167 KKEFNKLPKWKQNKLKMAVNLF 188
           K+ F KLPKWKQNK KMAV LF
Sbjct: 962 KEAFYKLPKWKQNKFKMAVQLF 983


>AT4G30160.1 | Symbols: VLN4, ATVLN4 | villin 4 |
           chr4:14754528-14759511 FORWARD LENGTH=974
          Length = 974

 Score =  216 bits (551), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 118/202 (58%), Positives = 144/202 (71%), Gaps = 15/202 (7%)

Query: 1   MSVSPDRVRVRGRSPAFNALAANFENTNARNLSTPPPIIRKLYPKSMSPDTAKLGP--KS 58
           MS SPDRVRVRGRSPAFNALAA FE+ NARNLSTPPP++RKLYP+S++PD++K  P  KS
Sbjct: 774 MSFSPDRVRVRGRSPAFNALAATFESQNARNLSTPPPVVRKLYPRSVTPDSSKFAPAPKS 833

Query: 59  SAIASISSTFEPPSAREKLIPRSLKAS------------SGASKSDPEISEKDDSMSSTT 106
           SAIAS S+ FE    +E  IP+ +KAS            S   +   E  +++ SMSS  
Sbjct: 834 SAIASRSALFEKIPPQEPSIPKPVKASPKTPESPAPESNSKEQEEKKENDKEEGSMSSRI 893

Query: 107 ESPNVQGDVKEGEAEDDEGLPVYPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMT 166
           ES  +Q D KEG  ED+E LP +PY+ + T STDP +DIDVT+REAYLS EEF++  GMT
Sbjct: 894 ESLTIQEDAKEG-VEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMT 952

Query: 167 KKEFNKLPKWKQNKLKMAVNLF 188
           K+ F KLPKWKQNK KMAV LF
Sbjct: 953 KEAFYKLPKWKQNKFKMAVQLF 974


>AT5G57320.1 | Symbols: VLN5 | villin, putative |
           chr5:23212690-23217549 FORWARD LENGTH=962
          Length = 962

 Score =  176 bits (446), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/197 (54%), Positives = 136/197 (69%), Gaps = 17/197 (8%)

Query: 1   MSVSPDRVRVRGRSPAFNALAANFENTNARNLSTPPPII----RKLYPKSMSPDTAKLGP 56
           M+ SPDR RVRGRSPAFNALAANFE  N RN STPPP++    RKLYPKS +PD +K+ P
Sbjct: 774 MTFSPDRARVRGRSPAFNALAANFEKLNIRNQSTPPPMVSPMVRKLYPKSHAPDLSKIAP 833

Query: 57  KSSAIASISSTFEPPSAREKLIPRSLKASSG-----ASKSDPEISEKDDSMSSTTESPNV 111
           KS AIA+ ++ FE P+   +  P S  +S       A KS  E +E +++MSS      +
Sbjct: 834 KS-AIAARTALFEKPTPTSQEPPTSPSSSEATNQAEAPKSTSETNE-EEAMSS------I 885

Query: 112 QGDVKEGEAEDDEGLPVYPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMTKKEFN 171
             D KE EAE++  LP +PYE + TDS DP +D+D+T+REAYL+  EF++   MTK EF 
Sbjct: 886 NEDSKEEEAEEESSLPTFPYERLKTDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFY 945

Query: 172 KLPKWKQNKLKMAVNLF 188
           KLPKWKQNKLKM+VNLF
Sbjct: 946 KLPKWKQNKLKMSVNLF 962


>AT2G29890.3 | Symbols: VLN1 | villin-like 1 |
           chr2:12744597-12749474 FORWARD LENGTH=933
          Length = 933

 Score = 84.3 bits (207), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 20/158 (12%)

Query: 31  NLSTPPPIIRKLYPKSMSPDTAKLGPKSSAIASISSTFEPPSAREKLIPRSLKASSGASK 90
           N S   P+++KL+ +S+  D     P    ++ ++   E          + +     +SK
Sbjct: 796 NSSNSTPVVKKLFSESLLVD-----PNDGKVSYVNLFTERLGYMTHKYQKRVARQESSSK 850

Query: 91  SDPEISEKDDSMSSTTESPNVQGDVKEGEAEDDEGLPVYPYESVNTDSTDPATDIDVTKR 150
           SD         +S       +  D+   E+        Y YE +  DS  P TDID T+R
Sbjct: 851 SD---------ISKQKPRVGINSDLSSLES------LAYSYEQLRVDSQKPVTDIDATRR 895

Query: 151 EAYLSPEEFQKHLGMTKKEFNKLPKWKQNKLKMAVNLF 188
           EAYL+ +EF++  GM K EF  LPKWKQNKLK++++LF
Sbjct: 896 EAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 933


>AT2G29890.2 | Symbols: VLN1, ATVLN1 | villin-like 1 |
           chr2:12744597-12749474 FORWARD LENGTH=911
          Length = 911

 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 129 YPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMTKKEFNKLPKWKQNKLKMAVNLF 188
           Y YE +  DS  P TDID T+REAYL+ +EF++  GM K EF  LPKWKQNKLK++++LF
Sbjct: 852 YSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 911


>AT2G29890.1 | Symbols: VLN1, ATVLN1 | villin-like 1 |
           chr2:12744597-12749474 FORWARD LENGTH=909
          Length = 909

 Score = 84.0 bits (206), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 35/60 (58%), Positives = 45/60 (75%)

Query: 129 YPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMTKKEFNKLPKWKQNKLKMAVNLF 188
           Y YE +  DS  P TDID T+REAYL+ +EF++  GM K EF  LPKWKQNKLK++++LF
Sbjct: 850 YSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLKISLHLF 909


>AT2G41740.1 | Symbols: VLN2, ATVLN2 | villin 2 |
           chr2:17410962-17416878 REVERSE LENGTH=976
          Length = 976

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/73 (43%), Positives = 45/73 (61%)

Query: 116 KEGEAEDDEGLPVYPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMTKKEFNKLPK 175
           ++G++E       + YE +   S +P T ID  +REAYLS EEFQ   G+ K+ FN LP+
Sbjct: 904 EQGDSEIQPSGATFTYEQLRAKSENPVTGIDFKRREAYLSEEEFQSVFGIEKEAFNNLPR 963

Query: 176 WKQNKLKMAVNLF 188
           WKQ+ LK   +LF
Sbjct: 964 WKQDLLKKKFDLF 976


>AT3G57410.1 | Symbols: VLN3, ATVLN3 | villin 3 |
           chr3:21243615-21249809 REVERSE LENGTH=965
          Length = 965

 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 36/60 (60%)

Query: 129 YPYESVNTDSTDPATDIDVTKREAYLSPEEFQKHLGMTKKEFNKLPKWKQNKLKMAVNLF 188
           + YE +   S  P T ID  +REAYLS  EF+   GM K+ F KLP WKQ+ LK   NLF
Sbjct: 906 FTYERLQAKSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKKFNLF 965