Miyakogusa Predicted Gene

Lj4g3v2120410.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2120410.1 tr|G7JUE1|G7JUE1_MEDTR WD repeat-containing
protein OS=Medicago truncatula GN=MTR_4g127820 PE=4
SV=1,74.41,0,seg,NULL; WD_REPEATS_2,WD40 repeat;
WD_REPEATS_REGION,WD40-repeat-containing domain; TRANSDUCIN
FAMI,CUFF.50264.1
         (801 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18900.1 | Symbols:  | Transducin/WD40 repeat-like superfamil...   896   0.0  
AT3G26480.1 | Symbols:  | Transducin family protein / WD-40 repe...   593   e-169

>AT2G18900.1 | Symbols:  | Transducin/WD40 repeat-like superfamily
           protein | chr2:8188491-8192409 REVERSE LENGTH=804
          Length = 804

 Score =  896 bits (2315), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 450/816 (55%), Positives = 564/816 (69%), Gaps = 30/816 (3%)

Query: 2   KGGQTYVSSPPSFSNDGKRLLVCSGCSVAVFSTATALQVSALEGHTAAVTSIVVVPA--- 58
           +GG++YV+SPPSFSND K+LLVC+G +V+VFS AT LQ+++LEGHTA VT+++VVPA   
Sbjct: 3   RGGRSYVTSPPSFSNDAKKLLVCTGNTVSVFSAATGLQITSLEGHTAPVTTLIVVPASSP 62

Query: 59  PNSVLSYCWTSSLDGTIRYWDFFLSECIKTLDLGFPIYSMVIPAILSPPEENNARQP--- 115
              +L YCWT+SLDGTIR+WDF   E +KT+D   PIYSMVIP++LS P++ + R+    
Sbjct: 63  AQKILCYCWTASLDGTIRHWDFSGPELLKTIDAQLPIYSMVIPSLLSEPQQIDKRRELSG 122

Query: 116 NVFAYVSVQDENAQDNRPKPRRGQIRKCNLTNYHAISNHILKETERPESLTICPSGKFLG 175
            + AYVSV+D +  +   K  RG IR+ NL          LKET  PES+ I PSG+F G
Sbjct: 123 KLVAYVSVEDISVVNQGSKELRGHIRRFNLAKSRIPRGDTLKETAEPESIVISPSGEFFG 182

Query: 176 IKDKRKLHIWKIPKMDSDSAVLKKITLHHTKTFTALAFHPTERIVAAGDVTGRILIWRGF 235
           I+ K K+HIW +P   S  AV +K+TLHHTK   A AFHPTER++AAGDVTGR+LIWRGF
Sbjct: 183 IRHKCKIHIWDVPSGGSRHAVSRKMTLHHTKVINAFAFHPTERVIAAGDVTGRVLIWRGF 242

Query: 236 GTHKFQDNSGLLNTRSMNDEEDKPGVRDNDDAESCSTWHWHSAGVRHLSFSSDGAYLYSG 295
           G  K    +     R+M D  D  GVR  DDAESC+TWHWHSA V  L+FSSDGAYLYSG
Sbjct: 243 GNRKLALGNQKKKVRAMVDL-DNAGVRGEDDAESCTTWHWHSAEVNVLNFSSDGAYLYSG 301

Query: 296 GKEGVLVLWQLDTGKKTFLPRIGSPLLYFVDSTDPSLSSISCADNQIHILKTPSMEIMRS 355
           G+EGVLV+WQLDTGKK FLPRIGSPLLYF+ S DP+LSS+ CADNQIH+LK PSMEI+R+
Sbjct: 302 GREGVLVVWQLDTGKKKFLPRIGSPLLYFMWSPDPTLSSVVCADNQIHLLKMPSMEILRT 361

Query: 356 ISGIKXXXXXXXXXXXXXXRAAFDCSSGLVAVQTENYGIQFYSLFGDRGLYEVQVCERNH 415
           ISGIK                AFD SSG+ A+ TENY +Q Y+L  DRG+ E+QVCERNH
Sbjct: 362 ISGIKPPPSLPRMYEGLASTVAFDRSSGIAALCTENYCVQLYNLLNDRGISEIQVCERNH 421

Query: 416 QXXXXXXXXXXXXXXXXXXXIMCTVEVKLPEEGIGGLICLKFWDLDSDSKRFSVSTLIYE 475
           Q                   +M T EVKLPE+GIGGL+ LKFW  + DSK F++ST++YE
Sbjct: 422 QPGDEITVVVTAVALSLDGSVMSTTEVKLPEDGIGGLVSLKFWASEPDSKTFTLSTIVYE 481

Query: 476 PHRDAHISSVAFHPTCHMAVSSSYGGDFKIWVCKEESQQKGKMLQTSSWMCHAVGSYKNK 535
           PHRDA +S++ FHPT  MAVS+S+GGDFKIWVC  +  Q  K    SSW+CHAVGSYK K
Sbjct: 482 PHRDAGVSAIVFHPTRSMAVSTSFGGDFKIWVCNSDKNQTDK---DSSWICHAVGSYKKK 538

Query: 536 AMRAAAFSADGSVLAVAADTVITLWDPDKNVLIAVVGETPTPIDRLNFAGKSEYLLSVSH 595
            M AAAFS DG+V+AVAA+ VITLW+PDKN+L++V+G T TPI +L FAGKSE+L++ SH
Sbjct: 539 PMTAAAFSGDGTVMAVAAENVITLWNPDKNILLSVLGSTLTPITKLCFAGKSEFLVAASH 598

Query: 596 GSNPQXXXXXXXXXXXXXXXXXQVEAVSCSMDLSFFAVLALLPK------SNERTFRS-D 648
              P+                 ++EAV+ ++D S FAVLA++PK      S E  FR  D
Sbjct: 599 IPRPELSVWNTSKLSLSWSYGLRIEAVTSAVDSSAFAVLAVIPKTFKTDESKENIFRGRD 658

Query: 649 GIILLFNATDPIPVASWSVAKAKGGGLAFIKGNSSELAITDGKPLQTLLAYINGDREYVL 708
           G ILLFN +DP PV+ W+V KA+GG ++F++G+ S+L           LAY+NG  EYV+
Sbjct: 659 GAILLFNGSDPKPVSIWTVMKARGGSISFLEGDKSQLR----------LAYVNGSHEYVV 708

Query: 709 FDPNDKESCERSMNRQEDLAAFEETGQIGYTSIYGELPAFDFKRNKASSVFSG---ASER 765
           FDPN  ES ERS    + LA  EETG  GYTS+YG+LP +D KR +          +SER
Sbjct: 709 FDPNSDESHERSAVDYDGLAGLEETGDAGYTSLYGQLPDYDKKRMEDVESLGTPFVSSER 768

Query: 766 PWETIFSGSSHMLPPLTKLCSEFLESLLEKRTTTVE 801
           PWETIFSGS+   PPL KLC+EF ESL+EKRT  VE
Sbjct: 769 PWETIFSGSTLNFPPLQKLCAEFFESLMEKRTAVVE 804


>AT3G26480.1 | Symbols:  | Transducin family protein / WD-40 repeat
           family protein | chr3:9687273-9690827 REVERSE LENGTH=764
          Length = 764

 Score =  593 bits (1528), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 340/813 (41%), Positives = 461/813 (56%), Gaps = 81/813 (9%)

Query: 1   MKGGQTYVSSPPSFSNDGKRLLVCSGCSVAVFSTATALQVSALEGHTAAVTSIVVVPAPN 60
           ++GG+  ++S P+FS D K+LL+C+  +V+V+S AT L++++LE HTA VTS++V P+ +
Sbjct: 2   IRGGRNNITSAPAFSKDAKKLLLCTANTVSVYSVATGLKITSLEDHTAPVTSVIVDPSSD 61

Query: 61  SVLSYCWTSSLDGTIRYWDFFLSECIKTLDLGFPIYSMV-IPAILSPPEENNARQPNVFA 119
             +SYCWTSSLDG IR W+F   + +K  D   PI+S+V IPA +S          +V A
Sbjct: 62  ETVSYCWTSSLDGKIRIWEFSAPKLLKIFDTHLPIHSLVMIPAQVSH---------SVIA 112

Query: 120 YVSVQDENAQDNRPKPRRGQIRKCNLTNYHAISNHILKETERPESLTICPSGKFLGIKDK 179
           YVSV+D ++     K   GQIR+ +LT     S   LKE E P+ + + PSG+F G+   
Sbjct: 113 YVSVEDYSSVS---KDLFGQIRRYDLTQDPLHSGDTLKEMEEPKPIVLSPSGEFFGVCHN 169

Query: 180 RKLHIWKIPKMDSDSAVLKKITLHHTKTFTALAFHPTERIVAAGDVTGRILIWRGFGTHK 239
             +HIW +    S+  + K+ TLHHT+  T  AFHP +RI+AAGDVTGR+LIW+  G  +
Sbjct: 170 CSIHIWNVA---SEHLMPKETTLHHTELITVFAFHPNQRILAAGDVTGRVLIWKDNGIGE 226

Query: 240 FQDNSGLLNTRSMNDEEDKPGVRDNDDAESCSTWHWHSAGVRHLSFSSDGAYLYSGGKEG 299
           F                    V+  DD ESC+T++WHSA V  L+FSSDGA LYSG K G
Sbjct: 227 FT------------------SVKTEDDTESCTTFNWHSAEVTVLNFSSDGALLYSGVKAG 268

Query: 300 VLVLWQLDTGKKTFLPRIGSPLLYFVDSTDPSLSSISCADNQIHILKTPSMEIMRSISGI 359
             V+W+L TGKK  LP+IGSPLLYF+ S+D +LSS+ CADNQIH+LK PSMEI+R+ISGI
Sbjct: 269 DFVVWELGTGKKQLLPKIGSPLLYFIFSSDSTLSSVICADNQIHLLKMPSMEILRTISGI 328

Query: 360 KXXX--------XXXXXXXXXXXRAAFDCSSGLVAVQTENYGIQFYSLFGDRGLYEVQVC 411
           K                        + D SSG+ A  T N+ +Q Y+L  D  + EVQ+C
Sbjct: 329 KPPTPERHGFICYVKTRDICLTRTVSIDRSSGIAAFCTANHRVQLYNLLSDHDISEVQIC 388

Query: 412 ERNHQXXXXXXXXXXXXXXXXXXXIMCTVEVKLPEEGIG-GLICLKFWDLDSDSKRFSVS 470
           + +                     +M T E +        G++ LKFW    DSK FS+S
Sbjct: 389 DHHPDDDDQVRVLVTAVALSRNGSVMTTAEARFAASNFSEGIVSLKFWVFVPDSKTFSLS 448

Query: 471 TLIYEPHRDAHISSVAFHPTCHMAVSSSYGGDFKIWVCKEESQQKGKMLQTSSWMCHAVG 530
           T+I +PHR+A I+++A +P   MAVS S  GDFKIWVC   S  K    + S+W+CH VG
Sbjct: 449 TVINQPHREAAITAIALNPARSMAVSISSAGDFKIWVC---SSDKNLTPEDSNWICHGVG 505

Query: 531 SYKNKAMRAAAFSADGSVLAVAADTVITLWDPDKNVLIAVVGETPTPIDRLNFAGKSEYL 590
           SYK   + AA FS DGS LA+AA TVIT+W P KN L+ VVG+   PI  L+F G   +L
Sbjct: 506 SYKRTPITAAVFSGDGSCLALAAKTVITIWHPLKNELLYVVGKANAPIMELSFTGGG-FL 564

Query: 591 LSVSHGSNPQXXXXXXXXXXXXXXXXXQVEAVSCSMDLSFFAVLALLP------KSNERT 644
           ++ SHGS P                   +EA++  +D  +FAVL  LP      KSNE+ 
Sbjct: 565 IAASHGSTPHLSVWDLMTFCLSWSYRLYIEAIATEVDSPYFAVLTWLPESDRLVKSNEQI 624

Query: 645 FR-SDGIILLFNATDPIPVASWSVAKAKGGGLAFIKGNSSELAITDGKPLQTLLAYINGD 703
           FR  DG ILLF+ + P PVA W+V KA+GG L+F++         DGK  Q LLAY+N  
Sbjct: 625 FRGKDGAILLFDGSGPKPVAIWTVMKARGGTLSFVE---------DGKKSQPLLAYVNRS 675

Query: 704 REYVLFDPNDKESCERSMNRQEDLAAFEETGQIGYTSIYGELPAFDFKRNKASSVFSGAS 763
            EYVLFDP   E                ET  I Y      +     +  K + +    S
Sbjct: 676 HEYVLFDPYSDEKL--------------ETSAIDYEVFLAAISKKKKRSRKKALM----S 717

Query: 764 ERPWETIFSGSSHMLPPLTKLCSEFLESLLEKR 796
           E+PWET+F GS+   PP   LC+ F  S ++K 
Sbjct: 718 EKPWETMFCGSTLNFPPFPDLCASFFSSRMQKE 750