Miyakogusa Predicted Gene

Lj4g3v2094890.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2094890.2 tr|A4S0T7|A4S0T7_OSTLU Predicted protein
OS=Ostreococcus lucimarinus (strain CCE9901)
GN=OSTLU_32860,26.29,2e-17,seg,NULL; no description,NULL; SET,SET
domain; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED PUTATIVE
ME,CUFF.50241.2
         (466 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18850.1 | Symbols:  | SET domain-containing protein | chr2:8...   452   e-127
AT2G18850.2 | Symbols:  | SET domain-containing protein | chr2:8...   449   e-126
AT3G07670.1 | Symbols:  | Rubisco methyltransferase family prote...    76   6e-14
AT1G14030.1 | Symbols:  | Rubisco methyltransferase family prote...    54   2e-07

>AT2G18850.1 | Symbols:  | SET domain-containing protein |
           chr2:8160788-8163479 FORWARD LENGTH=543
          Length = 543

 Score =  452 bits (1163), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 227/437 (51%), Positives = 308/437 (70%), Gaps = 7/437 (1%)

Query: 29  CKGFSPKERIYLNSSESG-WENATAKRLLEIERIIQLNELELYFAEDNGCTSVDFYSPRN 87
           CKG   KE + L+ S S    NA  ++LL   RI+ L+++E+YF ED  CT    YS RN
Sbjct: 34  CKGLCVKETLNLSGSLSQQLLNAALEKLLHFGRIVNLDKVEVYFGED-ACTPAGIYSVRN 92

Query: 88  ELEALNSVVFLIDISLSSCSHLHTNILQGLRQTMLDLISDFGDKNSVKGVVEIDHNCDQE 147
           E+ AL+ ++ LI +S    + + T   + LR  +   I++       K  V   + C++E
Sbjct: 93  EISALSWILSLIPVSCKMQTQVDT--FEALRAALKGRINEVVGAEKEKARVVDSYRCEKE 150

Query: 148 EHMIEWGESNGLKTQLKIAYVEGAGRGAIATKDLKVGDXXXXXXXXXXXXXXXVHETDMY 207
             ++EWG+ NG+KT+L+IA ++G GRGAIA++DLK GD               V+ +DMY
Sbjct: 151 SKLVEWGQDNGVKTKLQIAQIDGYGRGAIASEDLKFGDVALEIPVSSIISEEYVYNSDMY 210

Query: 208 QVLKMVDDISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAIAMLDGTLL 267
            +L+  D I+SET+LLLW+M+EK+N DSKFK YFD+L E F TGLSFG++AI  LDGTLL
Sbjct: 211 PILETFDGITSETMLLLWTMREKHNLDSKFKPYFDSLQENFCTGLSFGVDAIMELDGTLL 270

Query: 268 FEEIMLARQHLHAQYDELFPVLCDEFPDIFPRELYTREKFIWACELWYSNSMKIMYPDGK 327
            +EIM A++ L  +YDEL P+L +   ++FP ELYT E ++WACEL+YSNSM+I +PDGK
Sbjct: 271 LDEIMQAKELLRERYDELIPLLSNH-REVFPPELYTWEHYLWACELYYSNSMQIKFPDGK 329

Query: 328 LRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLRFCLSRPCKSGEECCLSYGSFPSSHLL 387
           L+TCLIP+AGFLNHS+ PH++ YGKVD  T+SL+F +SRPC  GE+C LSYG++ SSHLL
Sbjct: 330 LKTCLIPVAGFLNHSIYPHIVKYGKVDIETSSLKFPVSRPCNKGEQCFLSYGNYSSSHLL 389

Query: 388 TFYGFLPQGENLYDVIPLDIDGSDVNSIEDKPESNWTTHMVRGTWLSNNHSIFHYGLPSP 447
           TFYGFLP+G+N YDVIPLD D  D   IE   E +WTTHM+RGTWLS+NH+IFHYGLP+P
Sbjct: 390 TFYGFLPKGDNPYDVIPLDFDVIDDEDIE--TEFSWTTHMLRGTWLSSNHNIFHYGLPTP 447

Query: 448 LLDHLRKSRSPTLHTKT 464
           LL++LRK+     H++T
Sbjct: 448 LLNYLRKAHGLVHHSET 464


>AT2G18850.2 | Symbols:  | SET domain-containing protein |
           chr2:8160788-8163479 FORWARD LENGTH=536
          Length = 536

 Score =  449 bits (1156), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 225/428 (52%), Positives = 304/428 (71%), Gaps = 7/428 (1%)

Query: 29  CKGFSPKERIYLNSSESG-WENATAKRLLEIERIIQLNELELYFAEDNGCTSVDFYSPRN 87
           CKG   KE + L+ S S    NA  ++LL   RI+ L+++E+YF ED  CT    YS RN
Sbjct: 34  CKGLCVKETLNLSGSLSQQLLNAALEKLLHFGRIVNLDKVEVYFGED-ACTPAGIYSVRN 92

Query: 88  ELEALNSVVFLIDISLSSCSHLHTNILQGLRQTMLDLISDFGDKNSVKGVVEIDHNCDQE 147
           E+ AL+ ++ LI +S    + + T   + LR  +   I++       K  V   + C++E
Sbjct: 93  EISALSWILSLIPVSCKMQTQVDT--FEALRAALKGRINEVVGAEKEKARVVDSYRCEKE 150

Query: 148 EHMIEWGESNGLKTQLKIAYVEGAGRGAIATKDLKVGDXXXXXXXXXXXXXXXVHETDMY 207
             ++EWG+ NG+KT+L+IA ++G GRGAIA++DLK GD               V+ +DMY
Sbjct: 151 SKLVEWGQDNGVKTKLQIAQIDGYGRGAIASEDLKFGDVALEIPVSSIISEEYVYNSDMY 210

Query: 208 QVLKMVDDISSETILLLWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAIAMLDGTLL 267
            +L+  D I+SET+LLLW+M+EK+N DSKFK YFD+L E F TGLSFG++AI  LDGTLL
Sbjct: 211 PILETFDGITSETMLLLWTMREKHNLDSKFKPYFDSLQENFCTGLSFGVDAIMELDGTLL 270

Query: 268 FEEIMLARQHLHAQYDELFPVLCDEFPDIFPRELYTREKFIWACELWYSNSMKIMYPDGK 327
            +EIM A++ L  +YDEL P+L +   ++FP ELYT E ++WACEL+YSNSM+I +PDGK
Sbjct: 271 LDEIMQAKELLRERYDELIPLLSNH-REVFPPELYTWEHYLWACELYYSNSMQIKFPDGK 329

Query: 328 LRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLRFCLSRPCKSGEECCLSYGSFPSSHLL 387
           L+TCLIP+AGFLNHS+ PH++ YGKVD  T+SL+F +SRPC  GE+C LSYG++ SSHLL
Sbjct: 330 LKTCLIPVAGFLNHSIYPHIVKYGKVDIETSSLKFPVSRPCNKGEQCFLSYGNYSSSHLL 389

Query: 388 TFYGFLPQGENLYDVIPLDIDGSDVNSIEDKPESNWTTHMVRGTWLSNNHSIFHYGLPSP 447
           TFYGFLP+G+N YDVIPLD D  D   IE   E +WTTHM+RGTWLS+NH+IFHYGLP+P
Sbjct: 390 TFYGFLPKGDNPYDVIPLDFDVIDDEDIE--TEFSWTTHMLRGTWLSSNHNIFHYGLPTP 447

Query: 448 LLDHLRKS 455
           LL++LRK+
Sbjct: 448 LLNYLRKA 455


>AT3G07670.1 | Symbols:  | Rubisco methyltransferase family protein
           | chr3:2451651-2454617 FORWARD LENGTH=504
          Length = 504

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 80/331 (24%), Positives = 149/331 (45%), Gaps = 17/331 (5%)

Query: 83  YSPRNELEALNSVVFLIDISLSSCSH-LHTNILQGLRQTMLDLISDFGDKNSVKGVVEID 141
           YSP ++L   N  +    + LS C   +H ++  G  +T    I    +   +    EID
Sbjct: 15  YSPLHKLRNQNITLSFSPLPLSRCRPGIHCSVSAG--ETT---IQSMEEAPKISWGCEID 69

Query: 142 HNCDQEEHMIEWGESNGLKTQ-LKIAYVEGAGRGAIATKDLKVGDXXX-XXXXXXXXXXX 199
            + +    +  W   +GL  Q + I  V+   RG +A+++L+ G+               
Sbjct: 70  -SLENATSLQNWLSDSGLPPQKMAIDRVDIGERGLVASQNLRKGEKLLFVPPSLVISADS 128

Query: 200 XVHETDMYQVLKMVDDISSETILLLWSMKE-KYNCDSKFKIYFDTLPEKFNTGLSFGIEA 258
                +  +V+K  D +    +L  + + E      S++  Y   LP +  + L +    
Sbjct: 129 EWTNAEAGEVMKRYD-VPDWPLLATYLISEASLQKSSRWFNYISALPRQPYSLLYWTRTE 187

Query: 259 IAM-LDGTLLFEEIMLARQHLHAQYDELFPVLCDEFPDIFPRELYTREKFIWACELWYSN 317
           + M L+ + + E  +    ++   Y++L   +  + P +FP+E++  E F W+  + +S 
Sbjct: 188 LDMYLEASQIRERAIERITNVVGTYEDLRSRIFSKHPQLFPKEVFNDETFKWSFGILFSR 247

Query: 318 SMKIMYPDGKLRTCLIPIAGFLNHSLCPHVMHYGKVDPSTNSLRFCLSRPCKSGEECCLS 377
            +++   DG  R  L+P A  LNH+ C  V  +   D S+  + F   RP + GE+  +S
Sbjct: 248 LVRLPSMDG--RFALVPWADMLNHN-C-EVETFLDYDKSSKGVVFTTDRPYQPGEQVFIS 303

Query: 378 YGSFPSSHLLTFYGFLP-QGENLYDVIPLDI 407
           YG+  +  LL  YGF+P +G N  D + L +
Sbjct: 304 YGNKSNGELLLSYGFVPREGTNPSDSVELAL 334


>AT1G14030.1 | Symbols:  | Rubisco methyltransferase family protein
           | chr1:4805493-4807440 REVERSE LENGTH=482
          Length = 482

 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 17/180 (9%)

Query: 224 LWSMKEKYNCDSKFKIYFDTLPEKFNTGLSFGIEAIAMLDGTLLFEEIMLARQHLHAQYD 283
           L+ ++EKY  +S +++Y D LP+  ++ + +  E +A L GT L    +  ++++  ++ 
Sbjct: 125 LFLIREKYEEESSWRVYLDMLPQSTDSTVFWSEEELAELKGTQLLSTTLGVKEYVENEFL 184

Query: 284 ELFPVLCDEFPDIFPRELYTREKFIWACELWYSNSMKIMYPDGKLR---TCLIPIAGFLN 340
           +L   +     D+F   + T + FIWA  +  S +        +LR     LIP+A  +N
Sbjct: 185 KLEQEILLPNKDLFSSRI-TLDDFIWAFGILKSRAF------SRLRGQNLVLIPLADLIN 237

Query: 341 HSLCPHVMHYG----KVDPSTNSLRFCLSRP--CKSGEECCLSYGSFPSSHLLTF-YGFL 393
           H+       Y          +  L F L  P   K+GE+  + Y    S+  L   YGF+
Sbjct: 238 HNPAIKTEDYAYEIKGAGLFSRDLLFSLKSPVYVKAGEQVYIQYDLNKSNAELALDYGFV 297