Miyakogusa Predicted Gene

Lj4g3v2093720.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2093720.1 gi|36957232|gb|AY316741.1|.path1.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion ...   329   1e-90
AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3...   243   1e-64
AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion ...   243   1e-64
AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion ...   238   4e-63
AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion ...   229   2e-60
AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2...   225   3e-59
AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion ...   137   9e-33
AT3G49920.2 | Symbols: VDAC5 | voltage dependent anion channel 5...    72   5e-13

>AT5G57490.1 | Symbols: VDAC4, ATVDAC4 | voltage dependent anion
           channel 4 | chr5:23283895-23285335 REVERSE LENGTH=274
          Length = 274

 Score =  329 bits (843), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/277 (59%), Positives = 208/277 (75%), Gaps = 3/277 (1%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M + PA + +IGK+A+DLL KDY FD KF L++ S+TG   +ATGLKKD  F GDI+TLY
Sbjct: 1   MGSSPAPFADIGKKAKDLLNKDYIFDHKFTLTMLSATGTEFVATGLKKDDFFFGDISTLY 60

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K  N  VD+K+D++S+VSTKVTL ++    K  +SF IPDHKSGKLDVQY+HPHA ++SS
Sbjct: 61  KGQNTIVDLKIDSHSSVSTKVTLKNLLPSAKAVISFKIPDHKSGKLDVQYVHPHATLNSS 120

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           IGLNP+P L+LS  IGS+++C+G EV F+T S+S TKYNAGI FN    SAAL+L DKG+
Sbjct: 121 IGLNPTPLLDLSATIGSQNVCLGGEVSFDTASSSLTKYNAGIGFNNQGVSAALILEDKGE 180

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           SL+A+Y+H V+    F   AE+  RFS++ N FT+GSS  +D  TV+KTRFS+ GKA  +
Sbjct: 181 SLRATYVHTVNPTTSF--GAELIRRFSNYNNSFTVGSSHSVDQFTVVKTRFSNSGKAGMV 238

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            QR WRPKS IT SAEYDS K   SS KLGLALAL+P
Sbjct: 239 VQREWRPKSHITFSAEYDS-KAVTSSPKLGLALALKP 274


>AT5G15090.2 | Symbols: VDAC3 | voltage dependent anion channel 3 |
           chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 175/277 (63%), Gaps = 3/277 (1%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M  GP LY EIGK+ARDLLY+DY  DQKF+++  SSTG+ +  TG  K  +F+GD+ T  
Sbjct: 1   MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K+ N T DVKV T S++ T +T ++     KV +   +PDHKSGK +VQY H +A I +S
Sbjct: 61  KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           +G   +P +  S  +G+  L +G +V +NT S +F  +NAG  F + D +A+L+L DKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
            L ASY + +  P    V AEI+H F++ EN  T+G+   +DP T +K R ++ G A  L
Sbjct: 181 KLNASY-YQIVSPS-TVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q  WRPKS  T+S E DS K    S K+G+ALAL+P
Sbjct: 239 IQHEWRPKSFFTVSGEVDS-KAIDKSAKVGIALALKP 274


>AT5G15090.1 | Symbols: VDAC3, ATVDAC3 | voltage dependent anion
           channel 3 | chr5:4889641-4891389 REVERSE LENGTH=274
          Length = 274

 Score =  243 bits (620), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 124/277 (44%), Positives = 175/277 (63%), Gaps = 3/277 (1%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M  GP LY EIGK+ARDLLY+DY  DQKF+++  SSTG+ +  TG  K  +F+GD+ T  
Sbjct: 1   MVKGPGLYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQV 60

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K+ N T DVKV T S++ T +T ++     KV +   +PDHKSGK +VQY H +A I +S
Sbjct: 61  KNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTS 120

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           +G   +P +  S  +G+  L +G +V +NT S +F  +NAG  F + D +A+L+L DKG+
Sbjct: 121 VGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGE 180

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
            L ASY + +  P    V AEI+H F++ EN  T+G+   +DP T +K R ++ G A  L
Sbjct: 181 KLNASY-YQIVSPS-TVVGAEISHNFTTKENAITVGTQHALDPLTTVKARVNNAGVANAL 238

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q  WRPKS  T+S E DS K    S K+G+ALAL+P
Sbjct: 239 IQHEWRPKSFFTVSGEVDS-KAIDKSAKVGIALALKP 274


>AT5G67500.1 | Symbols: VDAC2, ATVDAC2 | voltage dependent anion
           channel 2 | chr5:26935223-26937123 FORWARD LENGTH=276
          Length = 276

 Score =  238 bits (607), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 120/277 (43%), Positives = 175/277 (63%), Gaps = 1/277 (0%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M+ GP L+ +IGK+A+DLL +DYN DQKF++S  S++G+ L +T LKK  +   D+ T Y
Sbjct: 1   MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVALTSTALKKGGVHAADVATQY 60

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K  N   DVK+DT S+V T VTL +I    K   SF +PD+ S KL+VQY H HA + ++
Sbjct: 61  KYKNALFDVKIDTDSSVLTTVTLTEILPSTKAIASFKVPDYNSAKLEVQYFHDHATVTAA 120

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
             L  +P ++++  +GS  +  GAE G++TTS +FTKYNAGI+  +PD   +++L DKG 
Sbjct: 121 AALKQNPLIDITATLGSPVISFGAEAGYDTTSKTFTKYNAGISVTKPDACLSIILGDKGD 180

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           SLKASY+HH D         E+  +FS+ EN  T+G    ID +T +K + ++ G    L
Sbjct: 181 SLKASYLHHFDEFKRTAAVGEVYRKFSTNENTITVGGLYAIDHSTAVKAKLNNHGTLGAL 240

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q    P+SL+T+S+E D TK      + GL+LAL+P
Sbjct: 241 LQHEVLPRSLVTVSSEID-TKALEKHPRFGLSLALKP 276


>AT3G01280.1 | Symbols: VDAC1, ATVDAC1 | voltage dependent anion
           channel 1 | chr3:85754-87612 FORWARD LENGTH=276
          Length = 276

 Score =  229 bits (583), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/277 (43%), Positives = 172/277 (62%), Gaps = 1/277 (0%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M  GP LY EIGK+ARDLLYKD+N DQKF+++  S  G+ + +TG KK  + +GD+    
Sbjct: 1   MVKGPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQS 60

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           +  N+T D+KV T S      T+++     +   SF +PD  SGK+++QYLH +A I +S
Sbjct: 61  RRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTS 120

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
           +GL  +P +  S  IGS  L +G +V F+T S +FTK NAG++F + D  A+L + DKG 
Sbjct: 121 MGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGD 180

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
            L ASY H V+      V AE++H+ SS ++  T+G+   +DP T +K R +  G A+ L
Sbjct: 181 LLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASAL 240

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q  W+PKS  T+S E D TK    S K+GLALAL+P
Sbjct: 241 IQHEWKPKSFFTISGEVD-TKSIDKSAKVGLALALKP 276


>AT5G67500.2 | Symbols: VDAC2 | voltage dependent anion channel 2 |
           chr5:26935223-26937123 FORWARD LENGTH=303
          Length = 303

 Score =  225 bits (573), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 121/304 (39%), Positives = 176/304 (57%), Gaps = 28/304 (9%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLG-------------------- 40
           M+ GP L+ +IGK+A+DLL +DYN DQKF++S  S++G+G                    
Sbjct: 1   MSKGPGLFTDIGKKAKDLLTRDYNSDQKFSISTYSASGVGTERENEYQDDIYFCLRTRCL 60

Query: 41  -------LIATGLKKDQIFIGDINTLYKSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVA 93
                  L +T LKK  +   D+ T YK  N   DVK+DT S+V T VTL +I    K  
Sbjct: 61  IMSENEALTSTALKKGGVHAADVATQYKYKNALFDVKIDTDSSVLTTVTLTEILPSTKAI 120

Query: 94  LSFNIPDHKSGKLDVQYLHPHAAIDSSIGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSA 153
            SF +PD+ S KL+VQY H HA + ++  L  +P ++++  +GS  +  GAE G++TTS 
Sbjct: 121 ASFKVPDYNSAKLEVQYFHDHATVTAAAALKQNPLIDITATLGSPVISFGAEAGYDTTSK 180

Query: 154 SFTKYNAGITFNRPDFSAALMLVDKGKSLKASYIHHVDRPDGFTVAAEINHRFSSFENRF 213
           +FTKYNAGI+  +PD   +++L DKG SLKASY+HH D         E+  +FS+ EN  
Sbjct: 181 TFTKYNAGISVTKPDACLSIILGDKGDSLKASYLHHFDEFKRTAAVGEVYRKFSTNENTI 240

Query: 214 TIGSSQLIDPNTVLKTRFSDDGKAAFLCQRAWRPKSLITLSAEYDSTKIFGSSTKLGLAL 273
           T+G    ID +T +K + ++ G    L Q    P+SL+T+S+E D TK      + GL+L
Sbjct: 241 TVGGLYAIDHSTAVKAKLNNHGTLGALLQHEVLPRSLVTVSSEID-TKALEKHPRFGLSL 299

Query: 274 ALQP 277
           AL+P
Sbjct: 300 ALKP 303


>AT3G49920.1 | Symbols: VDAC5, ATVDAC5 | voltage dependent anion
           channel 5 | chr3:18505836-18507699 REVERSE LENGTH=226
          Length = 226

 Score =  137 bits (345), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 137/277 (49%), Gaps = 51/277 (18%)

Query: 1   MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
           M+ GP L+ +IGK A+DLL +DY+ DQKF++S  S +G+ L +T LK   +   ++ T Y
Sbjct: 1   MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60

Query: 61  KSGNLTVDVKVDTYSNVSTKVTLNDIFRCKKVALSFNIPDHKSGKLDVQYLHPHAAIDSS 120
           K  N   DVK+DT  NV + V                 P +K   +D   L         
Sbjct: 61  KYRNTFFDVKIDTDFNVKSLV----------------YPMNKFVSIDHNTL--------- 95

Query: 121 IGLNPSPQLELSTAIGSKDLCMGAEVGFNTTSASFTKYNAGITFNRPDFSAALMLVDKGK 180
                                     G++TTS +FTKYN G++  +PD   +++L DKG 
Sbjct: 96  -------------------------TGYDTTSRTFTKYNVGVSVTKPDQCVSIILGDKGD 130

Query: 181 SLKASYIHHVDRPDGFTVAAEINHRFSSFENRFTIGSSQLIDPNTVLKTRFSDDGKAAFL 240
           S+KASY++++D         E+  + S+ E   T+G    +D  T +K + + +GK   L
Sbjct: 131 SIKASYVYYLDESTRSATVGEVIRKISTNETTVTVGGLYAVDHLTNVKAKLNSNGKFGAL 190

Query: 241 CQRAWRPKSLITLSAEYDSTKIFGSSTKLGLALALQP 277
            Q    PKS++T+S E D TK      +LGL+L+L+P
Sbjct: 191 LQHEGLPKSIVTISGEID-TKTLDKYPRLGLSLSLKP 226


>AT3G49920.2 | Symbols: VDAC5 | voltage dependent anion channel 5
          | chr3:18506364-18507699 REVERSE LENGTH=127
          Length = 127

 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/82 (43%), Positives = 53/82 (64%)

Query: 1  MANGPALYPEIGKRARDLLYKDYNFDQKFNLSIPSSTGLGLIATGLKKDQIFIGDINTLY 60
          M+ GP L+ +IGK A+DLL +DY+ DQKF++S  S +G+ L +T LK   +   ++ T Y
Sbjct: 1  MSKGPGLFADIGKYAKDLLTRDYSTDQKFSISTNSVSGVALTSTALKNGVLHAANVATQY 60

Query: 61 KSGNLTVDVKVDTYSNVSTKVT 82
          K  N   DVK+DT  N+ T +T
Sbjct: 61 KYRNTFFDVKIDTDFNILTTIT 82