Miyakogusa Predicted Gene
- Lj4g3v2023870.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2023870.1 Non Chatacterized Hit- tr|C5Z5V3|C5Z5V3_SORBI
Putative uncharacterized protein Sb10g005930
OS=Sorghu,28.3,0.00000003,RING/U-box,NULL; seg,NULL; ZF_RING_2,Zinc
finger, RING-type; OS01G0736600 PROTEIN (FRAGMENT),NULL;
R,CUFF.50158.1
(524 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 268 1e-71
AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein | ... 244 9e-65
AT5G40250.1 | Symbols: | RING/U-box superfamily protein | chr5:... 160 2e-39
AT5G57750.1 | Symbols: | RING/U-box superfamily protein | chr5:... 147 2e-35
AT1G23980.1 | Symbols: | RING/U-box superfamily protein | chr1:... 138 8e-33
AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zi... 115 9e-26
AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein | ... 113 3e-25
AT2G20030.1 | Symbols: | RING/U-box superfamily protein | chr2:... 99 9e-21
AT4G28890.1 | Symbols: | RING/U-box superfamily protein | chr4:... 98 1e-20
AT5G17600.1 | Symbols: | RING/U-box superfamily protein | chr5:... 98 1e-20
AT4G40070.1 | Symbols: | RING/U-box superfamily protein | chr4:... 98 2e-20
AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 | chr3:... 97 4e-20
AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily p... 96 7e-20
AT1G72200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 95 1e-19
AT3G03550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 95 1e-19
AT1G22500.1 | Symbols: | RING/U-box superfamily protein | chr1:... 95 1e-19
AT1G72220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 94 2e-19
AT1G35330.1 | Symbols: | RING/U-box superfamily protein | chr1:... 92 8e-19
AT2G35000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 92 1e-18
AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 | chr3:... 90 5e-18
AT2G47560.1 | Symbols: | RING/U-box superfamily protein | chr2:... 89 5e-18
AT4G33565.1 | Symbols: | RING/U-box superfamily protein | chr4:... 89 7e-18
AT4G09130.1 | Symbols: | RING/U-box superfamily protein | chr4:... 89 1e-17
AT4G10160.1 | Symbols: | RING/U-box superfamily protein | chr4:... 88 1e-17
AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein | c... 88 2e-17
AT3G18930.2 | Symbols: | RING/U-box superfamily protein | chr3:... 87 2e-17
AT3G18930.1 | Symbols: | RING/U-box superfamily protein | chr3:... 87 2e-17
AT4G10150.1 | Symbols: | RING/U-box superfamily protein | chr4:... 86 5e-17
AT4G09120.1 | Symbols: | RING/U-box superfamily protein | chr4:... 86 6e-17
AT2G34990.1 | Symbols: | RING/U-box superfamily protein | chr2:... 86 8e-17
AT1G33480.1 | Symbols: | RING/U-box superfamily protein | chr1:... 85 1e-16
AT5G43420.1 | Symbols: | RING/U-box superfamily protein | chr5:... 85 1e-16
AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive... 83 4e-16
AT5G46650.1 | Symbols: | RING/U-box superfamily protein | chr5:... 83 4e-16
AT1G04360.1 | Symbols: | RING/U-box superfamily protein | chr1:... 83 5e-16
AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein | ... 83 5e-16
AT4G09110.1 | Symbols: | RING/U-box superfamily protein | chr4:... 83 5e-16
AT4G15975.1 | Symbols: | RING/U-box superfamily protein | chr4:... 83 6e-16
AT1G53820.1 | Symbols: | RING/U-box superfamily protein | chr1:... 82 9e-16
AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein | c... 81 2e-15
AT2G42350.1 | Symbols: | RING/U-box superfamily protein | chr2:... 80 5e-15
AT4G17920.1 | Symbols: | RING/U-box superfamily protein | chr4:... 79 6e-15
AT3G10910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 79 7e-15
AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVE... 79 1e-14
AT4G09100.1 | Symbols: | RING/U-box superfamily protein | chr4:... 78 1e-14
AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 | ch... 77 2e-14
AT5G01880.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 3e-14
AT5G05280.1 | Symbols: | RING/U-box superfamily protein | chr5:... 77 3e-14
AT2G27940.1 | Symbols: | RING/U-box superfamily protein | chr2:... 76 5e-14
AT2G35420.1 | Symbols: | RING/U-box superfamily protein | chr2:... 75 1e-13
AT3G61550.1 | Symbols: | RING/U-box superfamily protein | chr3:... 74 2e-13
AT2G42360.1 | Symbols: | RING/U-box superfamily protein | chr2:... 74 3e-13
AT1G20823.1 | Symbols: | RING/U-box superfamily protein | chr1:... 73 5e-13
AT5G42200.1 | Symbols: | RING/U-box superfamily protein | chr5:... 73 5e-13
AT4G38140.1 | Symbols: | RING/U-box superfamily protein | chr4:... 72 8e-13
AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein | c... 70 3e-12
AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 70 3e-12
AT2G46160.1 | Symbols: | RING/U-box superfamily protein | chr2:... 70 3e-12
AT3G18773.1 | Symbols: | RING/U-box superfamily protein | chr3:... 70 5e-12
AT1G49230.1 | Symbols: | RING/U-box superfamily protein | chr1:... 69 6e-12
AT3G43430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 69 7e-12
AT2G35910.1 | Symbols: | RING/U-box superfamily protein | chr2:... 69 7e-12
AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein | ... 69 8e-12
AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2... 68 2e-11
AT5G07040.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 2e-11
AT5G53110.1 | Symbols: | RING/U-box superfamily protein | chr5:... 67 3e-11
AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein | ch... 67 3e-11
AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B | chr4:1685223... 67 3e-11
AT1G49220.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 4e-11
AT1G49210.1 | Symbols: | RING/U-box superfamily protein | chr1:... 67 4e-11
AT2G46493.1 | Symbols: | RING/U-box superfamily protein | chr2:... 67 4e-11
AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A | chr2:7576640... 66 6e-11
AT1G49200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 66 7e-11
AT4G24015.1 | Symbols: | RING/U-box superfamily protein | chr4:... 66 8e-11
AT5G06490.1 | Symbols: | RING/U-box superfamily protein | chr5:... 65 9e-11
AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 65 1e-10
AT2G44578.1 | Symbols: | RING/U-box superfamily protein | chr2:... 65 2e-10
AT4G35840.1 | Symbols: | RING/U-box superfamily protein | chr4:... 64 2e-10
AT2G25410.1 | Symbols: | RING/U-box superfamily protein | chr2:... 64 2e-10
AT1G28040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 64 3e-10
AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B | chr4:6906066... 64 4e-10
AT2G18670.1 | Symbols: | RING/U-box superfamily protein | chr2:... 63 4e-10
AT5G66070.1 | Symbols: | RING/U-box superfamily protein | chr5:... 63 5e-10
AT5G66070.2 | Symbols: | RING/U-box superfamily protein | chr5:... 63 5e-10
AT2G46495.1 | Symbols: | RING/U-box superfamily protein | chr2:... 63 6e-10
AT1G74410.1 | Symbols: | RING/U-box superfamily protein | chr1:... 63 6e-10
AT2G37580.1 | Symbols: | RING/U-box superfamily protein | chr2:... 62 7e-10
AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A | chr4:6907777... 62 8e-10
AT3G20395.1 | Symbols: | RING/U-box superfamily protein | chr3:... 62 1e-09
AT5G36001.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 1e-09
AT5G45290.1 | Symbols: | RING/U-box superfamily protein | chr5:... 62 1e-09
AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region t... 61 2e-09
AT2G28920.1 | Symbols: | RING/U-box superfamily protein | chr2:... 61 2e-09
AT5G47610.1 | Symbols: | RING/U-box superfamily protein | chr5:... 61 2e-09
AT3G60966.1 | Symbols: | RING/U-box superfamily protein | chr3:... 61 2e-09
AT2G46494.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 3e-09
AT5G66160.2 | Symbols: RMR1 | receptor homology region transmemb... 60 3e-09
AT2G44581.1 | Symbols: | RING/U-box superfamily protein | chr2:... 60 4e-09
AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 60 5e-09
AT1G63840.1 | Symbols: | RING/U-box superfamily protein | chr1:... 59 6e-09
AT3G11110.1 | Symbols: | RING/U-box superfamily protein | chr3:... 59 7e-09
AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 59 7e-09
AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 | chr3:1771336... 59 8e-09
AT5G45290.2 | Symbols: | RING/U-box superfamily protein | chr5:... 59 8e-09
AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger) f... 59 9e-09
AT5G41400.1 | Symbols: | RING/U-box superfamily protein | chr5:... 59 1e-08
AT4G00305.1 | Symbols: | RING/U-box superfamily protein | chr4:... 58 1e-08
AT1G51930.1 | Symbols: | RING/U-box superfamily protein | chr1:... 58 1e-08
AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 57 2e-08
AT1G53010.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 3e-08
AT1G55530.1 | Symbols: | RING/U-box superfamily protein | chr1:... 57 3e-08
AT4G30370.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 3e-08
AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 4e-08
AT4G17245.1 | Symbols: | RING/U-box superfamily protein | chr4:... 57 4e-08
AT3G61180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 57 4e-08
AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 57 4e-08
AT4G26580.2 | Symbols: | RING/U-box superfamily protein | chr4:... 56 5e-08
AT4G26580.1 | Symbols: | RING/U-box superfamily protein | chr4:... 56 5e-08
AT3G58720.2 | Symbols: | RING/U-box superfamily protein | chr3:... 56 5e-08
AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |... 56 6e-08
AT5G41450.1 | Symbols: | RING/U-box superfamily protein | chr5:... 56 6e-08
AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 56 7e-08
AT4G26400.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT4G26400.2 | Symbols: | RING/U-box superfamily protein | chr4:... 55 8e-08
AT1G26800.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 8e-08
AT3G58720.1 | Symbols: | RING/U-box superfamily protein | chr3:... 55 1e-07
AT1G80400.1 | Symbols: | RING/U-box superfamily protein | chr1:... 55 1e-07
AT4G32600.1 | Symbols: | RING/U-box superfamily protein | chr4:... 55 1e-07
AT3G02340.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 2e-07
AT5G20885.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 2e-07
AT3G19910.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 3e-07
AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 54 3e-07
AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 54 3e-07
AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A | chr2:1704364... 54 3e-07
AT5G55970.2 | Symbols: | RING/U-box superfamily protein | chr5:... 54 4e-07
AT5G55970.1 | Symbols: | RING/U-box superfamily protein | chr5:... 54 4e-07
AT3G56580.3 | Symbols: | RING/U-box superfamily protein | chr3:... 54 4e-07
AT3G56580.1 | Symbols: | RING/U-box superfamily protein | chr3:... 54 4e-07
AT3G56580.2 | Symbols: | RING/U-box superfamily protein | chr3:... 54 4e-07
AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 | chr2:7... 53 4e-07
AT5G08139.1 | Symbols: | RING/U-box superfamily protein | chr5:... 53 4e-07
AT2G34000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 4e-07
AT1G14200.1 | Symbols: | RING/U-box superfamily protein | chr1:... 53 5e-07
AT3G19950.1 | Symbols: | RING/U-box superfamily protein | chr3:... 53 5e-07
AT2G03000.1 | Symbols: | RING/U-box superfamily protein | chr2:... 53 6e-07
AT5G41430.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 7e-07
AT3G30460.1 | Symbols: | RING/U-box superfamily protein | chr3:... 52 9e-07
AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zi... 52 1e-06
AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 52 1e-06
AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein ... 52 1e-06
AT5G52140.1 | Symbols: | RING/U-box superfamily protein | chr5:... 52 1e-06
AT1G67856.1 | Symbols: | RING/U-box superfamily protein | chr1:... 52 1e-06
AT5G41440.1 | Symbols: | RING/U-box superfamily protein | chr5:... 51 2e-06
AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogene... 51 2e-06
AT1G65040.1 | Symbols: | RING/U-box superfamily protein | chr1:... 50 4e-06
AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger) ... 50 5e-06
AT3G10815.1 | Symbols: | RING/U-box superfamily protein | chr3:... 50 5e-06
AT1G65040.3 | Symbols: | RING/U-box superfamily protein | chr1:... 50 6e-06
AT3G47180.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 6e-06
AT3G13430.3 | Symbols: | RING/U-box superfamily protein | chr3:... 49 6e-06
AT3G13430.2 | Symbols: | RING/U-box superfamily protein | chr3:... 49 6e-06
AT3G13430.1 | Symbols: | RING/U-box superfamily protein | chr3:... 49 6e-06
AT1G65040.2 | Symbols: | RING/U-box superfamily protein | chr1:... 49 8e-06
AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein | ... 49 1e-05
AT1G49850.1 | Symbols: | RING/U-box superfamily protein | chr1:... 49 1e-05
AT5G41350.1 | Symbols: | RING/U-box superfamily protein | chr5:... 49 1e-05
>AT4G30400.1 | Symbols: | RING/U-box superfamily protein |
chr4:14867068-14868486 FORWARD LENGTH=472
Length = 472
Score = 268 bits (684), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 187/446 (41%), Positives = 244/446 (54%), Gaps = 74/446 (16%)
Query: 83 PPSRETDD-LDSVTAXXXXXXXXXXXXDAGVDQSFIDTLPVFPFKAIIGLKN-PFDCAVC 140
P SR+ +D D+VTA D+GVDQSFIDTLPVF +K+IIGLKN PFDCAVC
Sbjct: 78 PSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVC 137
Query: 141 LCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANNN-RSPIVLVL 199
LCEFE EDKLRLLPKCSHAFHM+CIDTWLLSHSTCPLCR+SLL + S++ + RS +LVL
Sbjct: 138 LCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVL 197
Query: 200 ESGSD-SSREIVPEGGGA--IGRTSSVMTTHSRLGCCGESEFGSTRVDLPRKSGELAVIE 256
ES SD SSREI + A + + + + LG G ++ GSTR+D
Sbjct: 198 ESASDHSSREIGGDRDSAACVAANDDIDVSSAHLGLVGNNDLGSTRID------------ 245
Query: 257 SPDSNVAVAGDDG--VEKVV--TVKLGKYRNVX--XXXXXXXXXXXTKNVDARRCFSMGS 310
S + + G+ G V KVV +VKLGK+RN+ + ++D RRCFSMGS
Sbjct: 246 SGHGDQYLDGELGGSVGKVVPFSVKLGKFRNIDIGEGTSSNNNIGNSSSLDERRCFSMGS 305
Query: 311 FAYVMDESSSLQVPIKKTPIKPQSNKKLVLPLTPGHTLAMSECDCESRRDFKFSGLHATR 370
+ Y+MDE ++L+V + K QS+K L PGH AMSEC + KFSG + R
Sbjct: 306 YEYIMDEETTLKVHVS---TKKQSSKNRGL---PGHRTAMSECGFDPTGRLKFSGSGSMR 359
Query: 371 VDQNLAGTSSACSGNGAAIGKSRKESFSISKIWLRGKKXXXXXXXXXXXXXXXXXXXXXX 430
+ + A + +ESFS+SKIWLRGKK
Sbjct: 360 IVEEAAEKNVV-----------ERESFSVSKIWLRGKK--------EKHSKVQGKEDSSL 400
Query: 431 NAASVGDADDLKARRNKFDTRSVISEMDFGKWENXXXXXXXXXXXXXSEFGYDEENQSCY 490
++S G A + + ++I E G +E+NQ C
Sbjct: 401 VSSSSGRAFSFRLSNQRNHPDAMI------------------------ESGCEEDNQKCE 436
Query: 491 SMDS-QARAPSFARRTLLWLTGRQNK 515
+ +S + + PSFARRT+LWL GRQNK
Sbjct: 437 NSESLETKTPSFARRTMLWLAGRQNK 462
>AT2G18650.1 | Symbols: MEE16 | RING/U-box superfamily protein |
chr2:8086860-8088131 REVERSE LENGTH=423
Length = 423
Score = 244 bits (624), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 163/369 (44%), Positives = 212/369 (57%), Gaps = 66/369 (17%)
Query: 51 KVSPSXXXXXXXXXXVFFISGLLHLLVRFLWRPPSRET--DDLDSVTAXXXXXXXXXXXX 108
K++P+ +FFISGLLH+LV+FL PSRE+ D D+VTA
Sbjct: 38 KITPNILLIIIILSIIFFISGLLHILVKFLL-TPSRESREDYFDNVTALQGQLQQLFNLH 96
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
D+GVDQS IDTLPVF +K+I+GLK +PFDC VCLCEFE EDKLRLLPKCSHAFH+ECIDT
Sbjct: 97 DSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLLPKCSHAFHVECIDT 156
Query: 168 WLLSHSTCPLCRASLLPEFSANNNRSPIVLVLESGSDSSREIVPEGGGAIGRTSSVMTTH 227
WLLSHSTCPLCR++LL FS+++N S L++ SSR++VP V+ ++
Sbjct: 157 WLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVP-----------VLESN 205
Query: 228 SRLGCCGESEFGSTRVDLPRKSGELAVIESPDSNVAVAGDDGV-EKVV--TVKLGKYRNV 284
S+LG ++ STR+ RKS + PD ++ DG+ EKVV VKLGK+RN+
Sbjct: 206 SQLGYDVNNDSESTRIRSGRKSCD------PDGDM-----DGLDEKVVPLEVKLGKFRNI 254
Query: 285 XXX-----XXXXXXXXXTKNVDARRCFSMGSFAYVMDESSSLQVPIKKTPIKPQSNKKLV 339
+KNVD RRC SMGS+ Y+MD+ ++L+V + K S K V
Sbjct: 255 DHVGEGSDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVS---TKKLSGKDRV 311
Query: 340 LPLTPGHTLAMSECDCESRRDFKFSGLHATRVDQNLAGTSSACSGNGAAIGKSRKESFSI 399
P H MSEC D G+ + V+ +ESFS+
Sbjct: 312 ----PSHRTVMSECGF----DPTVKGIEKSVVE---------------------RESFSL 342
Query: 400 SKIWLRGKK 408
SKIWLRGKK
Sbjct: 343 SKIWLRGKK 351
>AT5G40250.1 | Symbols: | RING/U-box superfamily protein |
chr5:16086056-16087186 FORWARD LENGTH=376
Length = 376
Score = 160 bits (406), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 130/386 (33%), Positives = 170/386 (44%), Gaps = 115/386 (29%)
Query: 51 KVSPSXXXXXXXXXXVFFISGLLHLLVRFLWRPPSRETD-------DLDSVTAXXXXXXX 103
++SP+ +FFISGLLHLLVRFL + PS ++ + A
Sbjct: 40 RISPAVLFVIVILAVLFFISGLLHLLVRFLIKHPSATASSRSNRFPEISTSDALQRQLQQ 99
Query: 104 XXXXXDAGVDQSFIDTLPVFPFKAIIGL----------KNPFDCAVCLCEFEPEDKLRLL 153
D+G+DQ+FID LPVF +K I+G + PFDCAVCLCEF +DKLRLL
Sbjct: 100 LFHLNDSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLL 159
Query: 154 PKCSHAFHMECIDTWLLSHSTCPLCRASLL-PEFSANNNRSPIVLVLESGSDSSREIVPE 212
P CSHAFH+ CIDTWL S+STCPLCR +L P FS N P+
Sbjct: 160 PMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSPGFSMEN---PMF---------------- 200
Query: 213 GGGAIGRTSSVMTTHSRLGCCGESEFGSTRVDLPRKSGELAVIESPDSNVAVAGDDGVEK 272
+F R D E V E+ + VEK
Sbjct: 201 ------------------------DFDDIRED------EEGVTENGSQKTMEIQEIVVEK 230
Query: 273 -VVTVKLGKYR------NVXXXXXXXXXXXXTKNVDARRCFSMGSFAYVMDESSSLQVPI 325
V+ V+LGK++ N + N+DARRCFSMGS+ Y++ +S L+VP
Sbjct: 231 GVLPVRLGKFKRLDNVGNGQGQDVVAGGETSSSNLDARRCFSMGSYQYILG-NSELKVPF 289
Query: 326 K--KTP-IKPQSNKKLVLPLTPGHTLAMSECDCESRRDFKFSGLHATRVDQNLAGTSSAC 382
+ P +KPQ D ES + G SS+
Sbjct: 290 ANDRLPRLKPQ--------------------DKESEQ----------------TGNSSS- 312
Query: 383 SGNGAAIGKSRKESFSISKIWLRGKK 408
N ++ ESFS+SKIWL KK
Sbjct: 313 EDNKKINTVAKGESFSVSKIWLWPKK 338
>AT5G57750.1 | Symbols: | RING/U-box superfamily protein |
chr5:23399668-23400300 FORWARD LENGTH=210
Length = 210
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 81/168 (48%), Positives = 104/168 (61%), Gaps = 6/168 (3%)
Query: 47 DKALKVSPSXXXXXXXXXXVFFISGLLHLLVRFLWRPPSRETDDLDSVT----AXXXXXX 102
D +SP +FF++ L+HLLV+FL RP +R D D +T A
Sbjct: 27 DLICMISPIVLLYITLLSIIFFVAALIHLLVKFLHRPQTRLDDAYDGITESSTALQGRYQ 86
Query: 103 XXXXXXDAGVDQSFIDTLPVFPFKAIIGLKNPF-DCAVCLCEFEPEDKLRLLPKCSHAFH 161
DA +DQSFID LP+ +K +IGL++ DCAVCL EF ED+LRLLPKCSHAFH
Sbjct: 87 TRFNLHDAEIDQSFIDALPLLHYKTMIGLRHDLSDCAVCLREFTAEDELRLLPKCSHAFH 146
Query: 162 MECIDTWLLSHSTCPLCRASLLPEFSANN-NRSPIVLVLESGSDSSRE 208
+ECIDTWLL++STCPLCR +LL + S IVLV ES D+S++
Sbjct: 147 VECIDTWLLTNSTCPLCRDNLLLLGLTGTASSSTIVLVHESDGDNSQD 194
>AT1G23980.1 | Symbols: | RING/U-box superfamily protein |
chr1:8484879-8485988 REVERSE LENGTH=369
Length = 369
Score = 138 bits (348), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 83/143 (58%), Gaps = 10/143 (6%)
Query: 51 KVSPSXXXXXXXXXXVFFISGLLHLLVRFLWRPP----------SRETDDLDSVTAXXXX 100
++SP +FFI +LHLLVR+ + S + +
Sbjct: 48 RISPIILFIIVLLSVIFFICSILHLLVRYYLKKKRSNLSSSPNESNQNPEFSDSDTYQRQ 107
Query: 101 XXXXXXXXDAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAF 160
D+G+DQ+ ID LPVF +K I G K PFDCAVCLCEF +DKLRLLP CSHAF
Sbjct: 108 LQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKLRLLPNCSHAF 167
Query: 161 HMECIDTWLLSHSTCPLCRASLL 183
H++CIDTWLLS+STCPLCR +L
Sbjct: 168 HIDCIDTWLLSNSTCPLCRGTLF 190
>AT3G48030.1 | Symbols: | hypoxia-responsive family protein / zinc
finger (C3HC4-type RING finger) family protein |
chr3:17725410-17727954 REVERSE LENGTH=349
Length = 349
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 75/123 (60%), Gaps = 6/123 (4%)
Query: 66 VFFISGLLHLLVRFLWR-----PPSRETDDLDSVTAXXXXXXXXXXXXDAGVDQSFIDTL 120
+ G+L+L+ +FL + P + D + D+G+DQ+ ID L
Sbjct: 130 IIVFLGVLYLIFKFLRKSSTLFPIPHFNYNPDLFSFSSPQLQHLFFLHDSGLDQTAIDAL 189
Query: 121 PVFPFKAI-IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
PVF + + I L+ PFDCAVCL EF DKLRLLP CSHAFH+ CIDTWLLS+STCPLCR
Sbjct: 190 PVFLYGNVTISLEQPFDCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCR 249
Query: 180 ASL 182
SL
Sbjct: 250 RSL 252
>AT5G05810.1 | Symbols: ATL43 | RING/U-box superfamily protein |
chr5:1746938-1747999 FORWARD LENGTH=353
Length = 353
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 47/77 (61%), Positives = 61/77 (79%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
++G+D+S I++LPVF F A+ G K+ +CAVCL FEP + LRLLPKC HAFH+EC+DTW
Sbjct: 64 NSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTW 123
Query: 169 LLSHSTCPLCRASLLPE 185
L +HSTCPLCR + PE
Sbjct: 124 LDAHSTCPLCRYRVDPE 140
>AT2G20030.1 | Symbols: | RING/U-box superfamily protein |
chr2:8647813-8648985 FORWARD LENGTH=390
Length = 390
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 52/70 (74%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
+G+D+ I++LP F F A+ GLK +C+VCL +FE + LRLLPKC HAFH+ CID WL
Sbjct: 97 SGLDKKAIESLPFFRFSALKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWL 156
Query: 170 LSHSTCPLCR 179
H+TCPLCR
Sbjct: 157 EQHATCPLCR 166
>AT4G28890.1 | Symbols: | RING/U-box superfamily protein |
chr4:14256437-14257735 REVERSE LENGTH=432
Length = 432
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 53/70 (75%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
+G+D++ I++LP+F F A+ G K DC+VCL +FE + LRLLPKC HAFH+ CID WL
Sbjct: 96 SGLDKTAIESLPLFRFSALKGSKQGLDCSVCLSKFESVEILRLLPKCRHAFHIGCIDQWL 155
Query: 170 LSHSTCPLCR 179
H+TCPLCR
Sbjct: 156 EQHATCPLCR 165
>AT5G17600.1 | Symbols: | RING/U-box superfamily protein |
chr5:5800029-5801117 REVERSE LENGTH=362
Length = 362
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+++S I ++ V+ +K+ G + DC+VCL EFE + LRLLPKC+HAFH+ CIDTWL
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175
Query: 171 SHSTCPLCRASLL----PEFSANNNRSPIV 196
SHS CPLCRA + P S N S +V
Sbjct: 176 SHSNCPLCRAFVTGVNNPTASVGQNVSVVV 205
>AT4G40070.1 | Symbols: | RING/U-box superfamily protein |
chr4:18576533-18577504 FORWARD LENGTH=323
Length = 323
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 75/134 (55%), Gaps = 11/134 (8%)
Query: 53 SPSXXXXXXXXXXVFFISGLLHLLVRFLWRPPSRETDDLDSVTAXXXXXXXXXXXXDAGV 112
+PS +FF++GLL + +R R + DS T G+
Sbjct: 43 TPSKTTVFAVLVTLFFLTGLLSVYIRHCAR------SNPDSSTRYFRNRANDGSSRRGGL 96
Query: 113 DQSFIDTLPVFPFKAI----IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
D + +++ PVF + ++ IG K+ +CA+CL E E + +RLLP C+H FH++CIDTW
Sbjct: 97 DNAVVESFPVFAYSSVKESKIGSKD-LECAICLNELEDHETVRLLPICNHLFHIDCIDTW 155
Query: 169 LLSHSTCPLCRASL 182
L SH+TCP+CR++L
Sbjct: 156 LYSHATCPVCRSNL 169
>AT3G60220.1 | Symbols: ATL4, TL4 | TOXICOS EN LEVADURA 4 |
chr3:22254790-22255794 REVERSE LENGTH=334
Length = 334
Score = 96.7 bits (239), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 63/110 (57%), Gaps = 13/110 (11%)
Query: 115 SFIDTLPVFPFKAII---GLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 171
S +D+LP+F F ++ N DCAVCL +FEPED+LRLLP C HAFH +CID WL+S
Sbjct: 92 SVLDSLPIFKFSSVTRRSSSMNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVS 151
Query: 172 HSTCPLCRASL----------LPEFSANNNRSPIVLVLESGSDSSREIVP 211
+ TCPLCR+ L L +NN LE GS S R P
Sbjct: 152 NQTCPLCRSPLFASESDLMKSLAVVGSNNGGGENSFRLEIGSISRRRQTP 201
>AT5G10380.1 | Symbols: RING1, ATRING1 | RING/U-box superfamily
protein | chr5:3267819-3268724 FORWARD LENGTH=301
Length = 301
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 55/74 (74%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
G+ +S I+++ V FK G+ + +C+VCL EFE ++ LRLLPKCSHAFH+ CIDTWL
Sbjct: 108 VGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWL 167
Query: 170 LSHSTCPLCRASLL 183
LSH CPLCRA +L
Sbjct: 168 LSHKNCPLCRAPVL 181
>AT1G72200.1 | Symbols: | RING/U-box superfamily protein |
chr1:27169935-27171149 REVERSE LENGTH=404
Length = 404
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 52/77 (67%), Gaps = 3/77 (3%)
Query: 111 GVDQSFIDTLPVFPFKAIIGL---KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+D S I+T P F + + L K +C+VCL EFE ++ LRL+PKC H FH CID
Sbjct: 115 GLDASIIETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDA 174
Query: 168 WLLSHSTCPLCRASLLP 184
WL SH+TCPLCRA L+P
Sbjct: 175 WLRSHTTCPLCRADLIP 191
>AT3G03550.1 | Symbols: | RING/U-box superfamily protein |
chr3:850391-851461 REVERSE LENGTH=356
Length = 356
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 112 VDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 171
+D+S I ++ V+ ++ + G DC+VCL EF+ + LRLLPKC+HAFH+ CIDTWL S
Sbjct: 134 LDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKS 193
Query: 172 HSTCPLCRASLL 183
HS CPLCRA ++
Sbjct: 194 HSNCPLCRAFIV 205
>AT1G22500.1 | Symbols: | RING/U-box superfamily protein |
chr1:7949581-7950726 FORWARD LENGTH=381
Length = 381
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 3/102 (2%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGL---KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECI 165
+ G+D S I+T P FP+ + L K +C VCL EFE ++ LRL+P+C H FH CI
Sbjct: 87 EPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCI 146
Query: 166 DTWLLSHSTCPLCRASLLPEFSANNNRSPIVLVLESGSDSSR 207
D WL S +TCPLCRA+L+P + + L E+G +S R
Sbjct: 147 DAWLRSQTTCPLCRANLVPVPGESVSSEIPGLARETGQNSLR 188
>AT1G72220.1 | Symbols: | RING/U-box superfamily protein |
chr1:27184388-27185629 REVERSE LENGTH=413
Length = 413
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 52/73 (71%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
G+ QS I+++ + +K GL DC VCL EFE ++ LRLLPKC+HAFH+ CIDTWL
Sbjct: 150 TGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWL 209
Query: 170 LSHSTCPLCRASL 182
SH+ CPLCRA +
Sbjct: 210 SSHTNCPLCRAGI 222
>AT1G35330.1 | Symbols: | RING/U-box superfamily protein |
chr1:12965046-12966113 FORWARD LENGTH=327
Length = 327
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 42/84 (50%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+ + I++ P F + + GLK +CA+CL EFE E+ LRL+P CSHAFH CID
Sbjct: 99 GLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDV 158
Query: 168 WLLSHSTCPLCRASLLPEFSANNN 191
WL S STCP+CRASL P+ ++ N
Sbjct: 159 WLSSRSTCPVCRASLPPKPGSDQN 182
>AT2G35000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14751809-14752945 REVERSE LENGTH=378
Length = 378
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 51/76 (67%), Gaps = 3/76 (3%)
Query: 111 GVDQSFIDTLPVFPF---KAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+D I+T P F + KA+ K +CAVCLCEFE ++ LRL+P C H FH +C+D
Sbjct: 106 GLDAEAIETFPTFLYSEVKAVRIGKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDV 165
Query: 168 WLLSHSTCPLCRASLL 183
WL HSTCPLCRA L+
Sbjct: 166 WLSEHSTCPLCRADLV 181
>AT3G16720.1 | Symbols: ATL2, TL2 | TOXICOS EN LEVADURA 2 |
chr3:5692880-5693794 FORWARD LENGTH=304
Length = 304
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 65/118 (55%), Gaps = 13/118 (11%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+D + I +LPVF F K+P +CAVCL EFE + R+LP C H FH++CID W
Sbjct: 94 GLDPNVIKSLPVFTFSDETH-KDPIECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFH 152
Query: 171 SHSTCPLCRASL-----LPEFSANNNRSPI-------VLVLESGSDSSREIVPEGGGA 216
SHSTCPLCR+ + + +A R + VLV+E S S P G G+
Sbjct: 153 SHSTCPLCRSLVESLAGIESTAAAREREVVIAVDSDPVLVIEPSSSSGLTDEPHGSGS 210
>AT2G47560.1 | Symbols: | RING/U-box superfamily protein |
chr2:19511934-19512617 REVERSE LENGTH=227
Length = 227
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 109 DAGVDQSFIDTLPVFPF--KAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECID 166
D +DQ+ +D +P+F + K + +C+VCL EFE ED+ RLLPKC H+FH++CID
Sbjct: 78 DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSFHVDCID 137
Query: 167 TWLLSHSTCPLCRASLLPEFSA 188
TW S STCPLCRA + P F
Sbjct: 138 TWFRSRSTCPLCRAPVQPPFQV 159
>AT4G33565.1 | Symbols: | RING/U-box superfamily protein |
chr4:16136821-16137924 FORWARD LENGTH=367
Length = 367
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G++ + I ++ V + G+ DC+VCL EFE E+ LRLLPKC HAFH+ CIDTWL
Sbjct: 191 GLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLR 250
Query: 171 SHSTCPLCRASLLPEFSANNNRSPIVLVLESGSDSSREIVPEGGG 215
SH+ CPLCRA ++ + ++ S G + ++PE G
Sbjct: 251 SHTNCPLCRAPIVEANTMIDDHS-------EGLEEISVMIPEENG 288
>AT4G09130.1 | Symbols: | RING/U-box superfamily protein |
chr4:5815849-5816922 FORWARD LENGTH=357
Length = 357
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+D+ I++ P F + + K +CA+CLCEFE E+ LR +P CSH FH CID
Sbjct: 91 GIDKDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDE 150
Query: 168 WLLSHSTCPLCRASL 182
WL S STCP+CRA+L
Sbjct: 151 WLSSRSTCPVCRANL 165
>AT4G10160.1 | Symbols: | RING/U-box superfamily protein |
chr4:6336023-6337301 FORWARD LENGTH=225
Length = 225
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Query: 72 LLHLLVRFLWRPPSRETDDLDSVTAXXXXXXXXXXXXDAGVDQSFIDTLPVFPFKAIIGL 131
L+ LLV ++ R S D S+ + G+ + + LP+ +K +
Sbjct: 34 LIVLLVLYIMRRNSNTNVDWSSL-GGFVPTNNNLSTAELGLSKDIREMLPIVIYKESFTV 92
Query: 132 KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANNN 191
N C+VCL +++ E+KL+ +P C H FHMECID WL SH+TCPLCR SL+P+ S + +
Sbjct: 93 -NDTQCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLWLTSHTTCPLCRLSLIPKPSVDLS 151
Query: 192 RSPIVLV 198
I +V
Sbjct: 152 HQSIEIV 158
>AT3G05200.1 | Symbols: ATL6 | RING/U-box superfamily protein |
chr3:1477377-1478573 FORWARD LENGTH=398
Length = 398
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 5/88 (5%)
Query: 111 GVDQSFIDTLPVFPFKAI----IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECID 166
G+D S ++T P F + + +G K +CA+CL EFE ++ LRLLPKC H FH CID
Sbjct: 99 GLDVSVVETFPTFLYSDVKTQKLG-KGELECAICLNEFEDDETLRLLPKCDHVFHPHCID 157
Query: 167 TWLLSHSTCPLCRASLLPEFSANNNRSP 194
WL +H TCP+CRA+L + + + P
Sbjct: 158 AWLEAHVTCPVCRANLAEQVAEGESVEP 185
>AT3G18930.2 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPF----------DCAVCLCEFEPEDKLRLLPKCSHAF 160
G+D S I TLP+F + A P DCAVCL EFE D +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 161 HMECIDTWLLSHSTCPLCRASLLPEFSANNNRSPIVLVL 199
H+ECID WL SH CPLCR ++L SP V ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLM 218
>AT3G18930.1 | Symbols: | RING/U-box superfamily protein |
chr3:6524110-6525345 REVERSE LENGTH=411
Length = 411
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 54/99 (54%), Gaps = 10/99 (10%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPF----------DCAVCLCEFEPEDKLRLLPKCSHAF 160
G+D S I TLP+F + A P DCAVCL EFE D +R LP C HAF
Sbjct: 120 GLDDSVIKTLPLFLYSAAACTGKPAVGKTSAANCRDCAVCLLEFEEGDYVRTLPLCFHAF 179
Query: 161 HMECIDTWLLSHSTCPLCRASLLPEFSANNNRSPIVLVL 199
H+ECID WL SH CPLCR ++L SP V ++
Sbjct: 180 HLECIDEWLRSHPNCPLCRTAILGSAGVLTPMSPFVPLM 218
>AT4G10150.1 | Symbols: | RING/U-box superfamily protein |
chr4:6328136-6329558 FORWARD LENGTH=236
Length = 236
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
+ G+ + + LPV +K +K+ C+VCL +++ E+KL+ +P C H FHMECID W
Sbjct: 84 ELGLSKDIREMLPVVIYKESFIVKDS-QCSVCLGDYQAEEKLQQMPSCGHTFHMECIDLW 142
Query: 169 LLSHSTCPLCRASLLPEFSAN--NNRSPIVLVLESGSDSSREIVPEGGGA 216
L SH+TCPLCR SL+P+ S + + + IV +E+ + P+ A
Sbjct: 143 LTSHTTCPLCRLSLIPKPSLDLSHQSTEIVSSIENSNGGEASTQPDSQSA 192
>AT4G09120.1 | Symbols: | RING/U-box superfamily protein |
chr4:5813998-5815035 FORWARD LENGTH=345
Length = 345
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+++ I++ P F + + GLK +CA+CL EFE ++ LR +P CSH FH CID
Sbjct: 94 GLEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDV 153
Query: 168 WLLSHSTCPLCRASL 182
WL S STCP+CRA+L
Sbjct: 154 WLSSWSTCPVCRANL 168
>AT2G34990.1 | Symbols: | RING/U-box superfamily protein |
chr2:14750260-14751168 REVERSE LENGTH=302
Length = 302
Score = 85.5 bits (210), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 50/76 (65%), Gaps = 5/76 (6%)
Query: 111 GVDQSFIDTLPVFPFKAI----IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECID 166
G+D++ I++ P F + + IG+ +CAVC+CEFE + LRL+P+C H FH +C+
Sbjct: 67 GLDEAIINSFPTFLYSEVKERRIGIGG-VECAVCICEFEDHETLRLMPECCHVFHADCVS 125
Query: 167 TWLLSHSTCPLCRASL 182
WL HSTCPLCR L
Sbjct: 126 VWLSDHSTCPLCRVDL 141
>AT1G33480.1 | Symbols: | RING/U-box superfamily protein |
chr1:12148758-12150121 REVERSE LENGTH=261
Length = 261
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
+ G+ + + LP+ FK + + C+VCL +++P DKL+ +P C H FHM+CID W
Sbjct: 73 ELGLSKELREMLPIVVFKESFTVMDS-QCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLW 131
Query: 169 LLSHSTCPLCRASLLPEFSANNNRSPI 195
L SH+TCPLCR +L+P S + P+
Sbjct: 132 LTSHTTCPLCRLALIPSRSRQSQDDPV 158
>AT5G43420.1 | Symbols: | RING/U-box superfamily protein |
chr5:17451790-17452917 FORWARD LENGTH=375
Length = 375
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 22/128 (17%)
Query: 111 GVDQSFIDTLPVFPFK--------------AIIGLKNPFDCAVCLCEFEPEDKLRLLPKC 156
G+D+S I +P+F FK K +C+VCL EF+ E+KLR++P C
Sbjct: 98 GLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSEFQDEEKLRIIPNC 157
Query: 157 SHAFHMECIDTWLLSHSTCPLCR------ASLLPEFSANNNRSPIVLVLESGSDSSREIV 210
SH FH++CID WL +++ CPLCR S P+ + + SP LV+ G + +V
Sbjct: 158 SHLFHIDCIDVWLQNNANCPLCRTRVSCDTSFPPDRVSAPSTSPENLVMLRGENEY--VV 215
Query: 211 PEGGGAIG 218
E G +IG
Sbjct: 216 IELGSSIG 223
>AT5G27420.1 | Symbols: CNI1, ATL31 | carbon/nitrogen insensitive 1
| chr5:9684119-9685225 FORWARD LENGTH=368
Length = 368
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 111 GVDQSFIDTLPVFPFKAI----IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECID 166
G+D I+T P F + + IG K +CA+CL EFE ++ LRLLPKC H FH CI
Sbjct: 95 GLDAETIETFPTFVYSEVKTQKIG-KGALECAICLNEFEDDETLRLLPKCDHVFHPHCIG 153
Query: 167 TWLLSHSTCPLCRASL 182
WL H TCP+CR +L
Sbjct: 154 AWLQGHVTCPVCRTNL 169
>AT5G46650.1 | Symbols: | RING/U-box superfamily protein |
chr5:18930443-18931312 FORWARD LENGTH=289
Length = 289
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 5/104 (4%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGL---KNPFDCAVCLCEFEPED-KLRLLPKCSHAFHMEC 164
+ G++ I + P+FPF ++ L K +CA+CL EFE E LRLL C H FH EC
Sbjct: 83 NPGLEPHIIQSYPLFPFSSVKDLREDKYGLECAICLLEFEEEHILLRLLTTCYHVFHQEC 142
Query: 165 IDTWLLSHSTCPLCRASLLPEFSANNNRSPIVLVLESGSDSSRE 208
ID WL S+ TCP+CR +L P + N + I+ V++ + +R+
Sbjct: 143 IDQWLESNKTCPVCRRNLDPN-APENIKELIIEVIQENAHENRD 185
>AT1G04360.1 | Symbols: | RING/U-box superfamily protein |
chr1:1167507-1168652 REVERSE LENGTH=381
Length = 381
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 63/111 (56%), Gaps = 14/111 (12%)
Query: 109 DAGVDQSFIDTLPVFPFK---AIIG----LKNPFDCAVCLCEFEPEDKLRLLPKCSHAFH 161
+ G+D+S I +PVF FK + G KN +C+VCL EF+ ++KLR++P C H FH
Sbjct: 99 NRGLDESAIRAIPVFKFKKRDVVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFH 158
Query: 162 MECIDTWLLSHSTCPLCRASLLPEFSANNNRSPIVLVLESGSDSSREIVPE 212
++CID WL ++ CPLCR S+ E S L L S S RE P
Sbjct: 159 IDCIDIWLQGNANCPLCRTSVSCEAS-------FTLDLISAPSSPRENSPH 202
>AT4G17905.1 | Symbols: ATL4H | RING/U-box superfamily protein |
chr4:9948853-9949785 REVERSE LENGTH=310
Length = 310
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 110 AGVDQSFIDTLPVFPFKAII-GLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
AG+D + I + F K G K N DC++CL EF ++ LRLLPKC+H FH+ CID
Sbjct: 126 AGLDDTLIKKIGFFKLKKHQNGFKINGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDR 185
Query: 168 WLLSHSTCPLCRASLLPEFSANNNRSPIVLVLE 200
WL SHS CPLCRA ++ + +V+ L+
Sbjct: 186 WLKSHSNCPLCRAKIIVPTTQQPEHHVVVMNLD 218
>AT4G09110.1 | Symbols: | RING/U-box superfamily protein |
chr4:5812488-5813396 FORWARD LENGTH=302
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+++ +++ P+F + + GLK +CA+CL EF ++ LR +P CSH FH CID
Sbjct: 94 GLEKELVESFPIFLYSEVKGLKIGKGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDV 153
Query: 168 WLLSHSTCPLCRASL 182
WL S STCP CRA+L
Sbjct: 154 WLSSQSTCPACRANL 168
>AT4G15975.1 | Symbols: | RING/U-box superfamily protein |
chr4:9052313-9053020 FORWARD LENGTH=235
Length = 235
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
G++ S I +LP+F F A+ L +C+VCL EF+ + R++P C H FH++CID W
Sbjct: 50 GGLNPSIIKSLPIFTFSAVTALFA-MECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWF 108
Query: 170 LSHSTCPLCRASLLP 184
SHS+CPLCR+ + P
Sbjct: 109 HSHSSCPLCRSLIEP 123
>AT1G53820.1 | Symbols: | RING/U-box superfamily protein |
chr1:20091491-20092423 FORWARD LENGTH=310
Length = 310
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
+AG+D + ++ V FK K+ +CAVCL + DK R+LP+C+H FH++CID W
Sbjct: 93 NAGLDSKILQSIHVVVFKCT-DFKDGLECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMW 151
Query: 169 LLSHSTCPLCRASL 182
SHSTCPLCR ++
Sbjct: 152 FQSHSTCPLCRNTV 165
>AT1G72310.1 | Symbols: ATL3 | RING/U-box superfamily protein |
chr1:27226405-27227379 FORWARD LENGTH=324
Length = 324
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
+ G+ + +LP+ F+ K+ +C++CL E DK RLLPKC+H+FH+ECID W
Sbjct: 100 NTGLTSFELSSLPIVFFRQD-SCKDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMW 158
Query: 169 LLSHSTCPLCRASLLPEFSANNNR 192
SHSTCP+CR ++L A++ R
Sbjct: 159 FQSHSTCPICRNTVLGPEQASSKR 182
>AT2G42350.1 | Symbols: | RING/U-box superfamily protein |
chr2:17639245-17639898 FORWARD LENGTH=217
Length = 217
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 7/77 (9%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPF---DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+D I +LP F ++G+KN +CAVCL E +D R+LP C H FH+ C+DT
Sbjct: 75 GLDSLVIASLPTF----VVGIKNDVAGTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDT 130
Query: 168 WLLSHSTCPLCRASLLP 184
WL + STCP+CR P
Sbjct: 131 WLTTQSTCPVCRTEAEP 147
>AT4G17920.1 | Symbols: | RING/U-box superfamily protein |
chr4:9963221-9964090 REVERSE LENGTH=289
Length = 289
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGL---KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECI 165
+ G++ I++ P FP+ ++ L K +CA+CL EF+ + LRLL C H FH ECI
Sbjct: 79 NPGLELRIINSFPTFPYSSVKDLREEKYGLECAICLLEFDGDHVLRLLTTCYHVFHQECI 138
Query: 166 DTWLLSHSTCPLCRASLLPEFSANNNRSP----IVLVLESGSDSSRE 208
D W SH TCP+CR L P N + I+ V++ SD +
Sbjct: 139 DLWFESHRTCPVCRRDLDPPPPPENTKPTVDEMIIDVIQETSDDEED 185
>AT3G10910.1 | Symbols: | RING/U-box superfamily protein |
chr3:3413068-3413613 REVERSE LENGTH=181
Length = 181
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 58/109 (53%)
Query: 77 VRFLWRPPSRETDDLDSVTAXXXXXXXXXXXXDAGVDQSFIDTLPVFPFKAIIGLKNPFD 136
+R + R R T D A G+ + + +PV + + I +
Sbjct: 54 LRCVLRITRRFTSDDQVSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKATE 113
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPE 185
C +CL +FE +K+R+LPKC+H FH+ CIDTWLLS S+CP CR SLL E
Sbjct: 114 CLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSLLLE 162
>AT3G62690.1 | Symbols: ATL5 | AtL5 | chr3:23185829-23186602 REVERSE
LENGTH=257
Length = 257
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 49/73 (67%)
Query: 112 VDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 171
+D + ++ +P+F + +C+VCL EFE +D+ R+LPKC H FH++CIDTW S
Sbjct: 88 LDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRS 147
Query: 172 HSTCPLCRASLLP 184
S+CPLCRA + P
Sbjct: 148 RSSCPLCRAPVQP 160
>AT4G09100.1 | Symbols: | RING/U-box superfamily protein |
chr4:5811256-5811654 FORWARD LENGTH=132
Length = 132
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 47/77 (61%), Gaps = 3/77 (3%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLK---NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+D I + P F + G++ +C VCL EF+ ++ LRL+P C H FH +C+D
Sbjct: 56 GLDAEAIKSFPSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDI 115
Query: 168 WLLSHSTCPLCRASLLP 184
WL STCP+CRA ++P
Sbjct: 116 WLSHSSTCPICRAKVVP 132
>AT5G58580.1 | Symbols: ATL63, TL63 | TOXICOS EN LEVADURA 63 |
chr5:23676906-23677832 REVERSE LENGTH=308
Length = 308
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
D G+D S I ++P+F ++ ++ + C +CL +E D R L C H FH+ECID
Sbjct: 109 DKGLDSSVISSIPLFVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDM 168
Query: 168 WLLSHSTCPLCRASLLPEFSANNNRSPIVLVLESGSDSSREIVPEG 213
WL SHSTCPLCR+ +L S N V +E ++ ++ P G
Sbjct: 169 WLSSHSTCPLCRSPVLAAVSDEENLKLAVNAVEEEAEVRLQMSPAG 214
>AT5G01880.1 | Symbols: | RING/U-box superfamily protein |
chr5:339017-339496 FORWARD LENGTH=159
Length = 159
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
AG+ + + PV + + +CA+CL EF +++R+LP C+H+FHM CIDTWL
Sbjct: 78 AGLKKRELKKFPVAEYGSGEVKIAATECAICLGEFADGERVRVLPPCNHSFHMSCIDTWL 137
Query: 170 LSHSTCPLCRASLL 183
+SHS+CP CR SL+
Sbjct: 138 VSHSSCPNCRHSLI 151
>AT5G05280.1 | Symbols: | RING/U-box superfamily protein |
chr5:1565509-1566039 REVERSE LENGTH=176
Length = 176
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+ + + +PV + + +K +C +CL +F + +R+LPKC+H FH++CIDTWLL
Sbjct: 88 GIKKRALKVIPVDSYSPELKMK-ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLL 146
Query: 171 SHSTCPLCRASLLP-EFSANNNR 192
SHS+CP CR SLL + AN +R
Sbjct: 147 SHSSCPTCRQSLLEHQTPANGSR 169
>AT2G27940.1 | Symbols: | RING/U-box superfamily protein |
chr2:11897963-11898742 FORWARD LENGTH=237
Length = 237
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+D + +LPV+ + +N DC +CL +FE + ++++P C H FH++C+DTWL
Sbjct: 115 GLDSQAVRSLPVYRYTKAAKQRNE-DCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLS 173
Query: 171 SHSTCPLCRASLL 183
S+ TCPLCR++ L
Sbjct: 174 SYVTCPLCRSNQL 186
>AT2G35420.1 | Symbols: | RING/U-box superfamily protein |
chr2:14899715-14900479 REVERSE LENGTH=254
Length = 254
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
+ G+D I + PVF + + + +CA+CL EF ED +RL+ C H FH CID W
Sbjct: 75 NTGLDPFIIRSFPVFHYSSATKKNHGTECAICLSEFSDEDTVRLITVCRHPFHSNCIDLW 134
Query: 169 LLSHSTCPLCRASLLP 184
H TCP+CR L P
Sbjct: 135 FELHKTCPVCRCELDP 150
>AT3G61550.1 | Symbols: | RING/U-box superfamily protein |
chr3:22776444-22777082 FORWARD LENGTH=212
Length = 212
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 11/97 (11%)
Query: 110 AGVDQSFIDTLPVFPF-KAIIGLKN----------PFDCAVCLCEFEPEDKLRLLPKCSH 158
G+D S I++ P F F K I + N C++CLCE+ E+ LR++P+C H
Sbjct: 98 GGLDHSVINSYPKFHFTKDITAVVNGDGFHDGEGRETTCSICLCEYMEEEMLRMMPECKH 157
Query: 159 AFHMECIDTWLLSHSTCPLCRASLLPEFSANNNRSPI 195
FH+ C+D WL + +CP+CR S LP + +P+
Sbjct: 158 YFHVYCLDAWLKLNGSCPVCRNSPLPTPQSTPQSTPL 194
>AT2G42360.1 | Symbols: | RING/U-box superfamily protein |
chr2:17640907-17641617 FORWARD LENGTH=236
Length = 236
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 66 VFFISGLLHLLVRFLWRPPSRETDDLDSVTAXXXXXXXXXXXXDAGVDQSFIDTLPVFPF 125
V I LHL RF+ R ++ G++ + I +LP F
Sbjct: 42 VILIVFALHLYARFVLR------RRREAFRGLPVIFRHPFEMPKRGLNPTVIASLPTFTV 95
Query: 126 KAIIGLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
A G+ + +CAVCL + +DK R LP C H FH++C+DTWL + STCP+CR + P
Sbjct: 96 GATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDTWLTTCSTCPVCRTEVEP 155
>AT1G20823.1 | Symbols: | RING/U-box superfamily protein |
chr1:7238880-7239473 FORWARD LENGTH=197
Length = 197
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPF-DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
+ G+ + + +LP F F +CA+CL EF D+LR+LP+C H FH+ CIDT
Sbjct: 82 NKGLKKKVLQSLPKLTFSPESPESEKFAECAICLAEFSAGDELRVLPQCGHGFHVACIDT 141
Query: 168 WLLSHSTCPLCRASLL 183
WL SHS+CP CR L+
Sbjct: 142 WLGSHSSCPSCRQILV 157
>AT5G42200.1 | Symbols: | RING/U-box superfamily protein |
chr5:16860523-16861014 FORWARD LENGTH=163
Length = 163
Score = 72.8 bits (177), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 117 IDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCP 176
++ +P + + + +CAVCL + E RL+P C+H FH C DTWL +H+ CP
Sbjct: 84 LEKIPKLTGRELAVIARSTECAVCLEDIESGQSTRLVPGCNHGFHQLCADTWLSNHTVCP 143
Query: 177 LCRASLLPEF-SANNNRSP 194
+CRA L P N N+SP
Sbjct: 144 VCRAELAPNLPQCNENQSP 162
>AT4G38140.1 | Symbols: | RING/U-box superfamily protein |
chr4:17899868-17900305 REVERSE LENGTH=145
Length = 145
Score = 72.0 bits (175), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 5/68 (7%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL-SHSTCPLCRASLL----PEFSANNN 191
C +CL EFE ED + LP+C+H FH+ CI+ WLL H TCPLCR+ +L P + NN
Sbjct: 62 CPICLVEFEAEDAVTHLPRCAHLFHINCIEPWLLRGHLTCPLCRSFVLAPTPPTQNVNNA 121
Query: 192 RSPIVLVL 199
S L L
Sbjct: 122 HSSSTLYL 129
>AT1G76410.1 | Symbols: ATL8 | RING/U-box superfamily protein |
chr1:28668915-28669472 FORWARD LENGTH=185
Length = 185
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 37/49 (75%)
Query: 135 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+CA+CL EF D+LR+LP+C H FH+ CIDTWL SHS+CP CR L+
Sbjct: 102 VECAICLTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCRQILV 150
>AT3G14320.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr3:4777731-4778345 REVERSE LENGTH=204
Length = 204
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
G+ + ++P+ F K +C VCL E DK R+LP C H FH+ECID+WL
Sbjct: 62 VGIKPYVLRSIPIVDFNTK-DFKYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWL 120
Query: 170 LSHSTCPLCR 179
S+STCP+CR
Sbjct: 121 QSNSTCPICR 130
>AT2G46160.1 | Symbols: | RING/U-box superfamily protein |
chr2:18963109-18963753 FORWARD LENGTH=214
Length = 214
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 110 AGVDQSFIDTLPVFPFKAIIGLKNP--------FDCAVCLCEFEPEDKLRLLPKCSHAFH 161
G+DQ+ I++ P F F + C++CLCE++ + LR++P+C H FH
Sbjct: 103 VGLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCSICLCEYKEAEMLRMMPECKHYFH 162
Query: 162 MECIDTWLLSHSTCPLCRASLLPEFSANNNRSPI 195
+ C+D WL + +CP+CR S LP ++ +P+
Sbjct: 163 LCCLDAWLKLNGSCPVCRNSPLPTPTSTPLSTPL 196
>AT3G18773.1 | Symbols: | RING/U-box superfamily protein |
chr3:6466304-6466966 FORWARD LENGTH=220
Length = 220
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNP-FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
+ G+ + + LPV + I L +C +CL +F ++LR+LPKC+H FH+ CID
Sbjct: 101 NKGIKKKALKMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDK 160
Query: 168 WLLSHSTCPLCRASLL 183
WL H TCP CR L+
Sbjct: 161 WLTQHMTCPKCRHCLV 176
>AT1G49230.1 | Symbols: | RING/U-box superfamily protein |
chr1:18209320-18209979 FORWARD LENGTH=219
Length = 219
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+CA+CL EF E++++LLP C H FH+ CID WL SHS+CP CR L+
Sbjct: 130 ECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCRHCLI 177
>AT3G43430.1 | Symbols: | RING/U-box superfamily protein |
chr3:15354758-15355261 REVERSE LENGTH=167
Length = 167
Score = 69.3 bits (168), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 9/60 (15%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL---------LSHSTCPLCRASLLPEFS 187
CAVCL + E ED++R L C+H FH +CID WL +H TCPLCR LLP F+
Sbjct: 83 CAVCLGDLEDEDEIRELRNCTHVFHRDCIDRWLDYECCGGDDDNHRTCPLCRTPLLPSFT 142
>AT2G35910.1 | Symbols: | RING/U-box superfamily protein |
chr2:15073225-15073878 REVERSE LENGTH=217
Length = 217
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 45/74 (60%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+D+ I + P + G CA+CL +++ + LR LP C+H FH++CIDTWL
Sbjct: 121 GLDEDTIQSYPKILYSEAKGPTTASCCAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLR 180
Query: 171 SHSTCPLCRASLLP 184
+ TCP+CR S LP
Sbjct: 181 LNPTCPVCRTSPLP 194
>AT1G32361.1 | Symbols: ATL1F | RING/U-box superfamily protein |
chr1:11675531-11676529 FORWARD LENGTH=332
Length = 332
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
+ G+D I++ P +P+ + C++CL EF +D +RL+ C+H+FH CID W
Sbjct: 128 NLGLDSKIIESFPEYPYS--VKDHGTDQCSICLTEFMDDDTIRLISTCNHSFHTICIDLW 185
Query: 169 LLSHSTCPLCRASL 182
H TCP+CR L
Sbjct: 186 FEGHKTCPVCRREL 199
>AT3G61460.1 | Symbols: BRH1 | brassinosteroid-responsive RING-H2 |
chr3:22741701-22742213 REVERSE LENGTH=170
Length = 170
Score = 67.8 bits (164), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 41/71 (57%), Gaps = 3/71 (4%)
Query: 118 DTLPVFPFKAII--GLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL-LSHST 174
+ LPV F+ + G P +CAVCL EFE E ++R L C H FH C+D W+ T
Sbjct: 73 EILPVIKFEELTNSGEDLPENCAVCLYEFEGEQEIRWLRNCRHIFHRSCLDRWMDHDQKT 132
Query: 175 CPLCRASLLPE 185
CPLCR +P+
Sbjct: 133 CPLCRTPFVPD 143
>AT5G07040.1 | Symbols: | RING/U-box superfamily protein |
chr5:2190344-2190823 FORWARD LENGTH=159
Length = 159
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
Query: 111 GVDQSFIDTLPVFPFKAIIG----LKNPFD--CAVCLCEFEPEDKLRLLPKCSHAFHMEC 164
G+D+ I++ P + ++G L P + C++CLC++E + +R +P+C+H FH +C
Sbjct: 66 GLDRPVIESYP----RIVLGDSRRLPRPNNGPCSICLCDYEAREPVRCIPECNHCFHTDC 121
Query: 165 IDTWLLSHSTCPLCRASLLP 184
+D WL + +TCPLCR S P
Sbjct: 122 VDEWLRTSATCPLCRNSPAP 141
>AT5G53110.1 | Symbols: | RING/U-box superfamily protein |
chr5:21529022-21533008 FORWARD LENGTH=382
Length = 382
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRAS 181
CA+CL E+EP++ LR +P+C H FH +CID WL + TCP+CR S
Sbjct: 330 CAICLSEYEPKETLRTIPQCQHCFHADCIDEWLKLNGTCPVCRNS 374
>AT3G19140.1 | Symbols: DNF | RING/U-box superfamily protein |
chr3:6614910-6615335 REVERSE LENGTH=141
Length = 141
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G++ S + ++PV F A K+ +C VCL +F EDK R+LP C+H FH + DTWL
Sbjct: 54 GINPSVLLSIPVVSFNAN-AFKDNIECVVCLSKFIDEDKARVLPSCNHCFHFDFTDTWLH 112
Query: 171 SHSTCPLCRASL 182
S TCP CR ++
Sbjct: 113 SDYTCPNCRKNV 124
>AT4G35480.1 | Symbols: RHA3B | RING-H2 finger A3B |
chr4:16852233-16852835 REVERSE LENGTH=200
Length = 200
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 37/49 (75%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
+CA+C+ EF +++R+LP CSHAFH+ CID WL S S+CP CR L+P
Sbjct: 112 ECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCRRILVP 160
>AT1G49220.1 | Symbols: | RING/U-box superfamily protein |
chr1:18205946-18206701 FORWARD LENGTH=251
Length = 251
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 34/48 (70%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+C +CL +F ++LRLLPKC+H FH+ CID WL H TCP CR L+
Sbjct: 134 ECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCLV 181
>AT1G49210.1 | Symbols: | RING/U-box superfamily protein |
chr1:18201994-18202671 FORWARD LENGTH=225
Length = 225
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Query: 73 LHLLVRFLWRPPSRETDDLDSVTAXXXXXXXXXXXXDAGVDQSFIDTLPVFPFKAIIGLK 132
LH ++R +R SR ++ + G+ + + PV + + L
Sbjct: 75 LHYIIRCAFRRSSRFM-----ISEPISSLSTPRSSSNKGIKKKALRMFPVVSYSREMNLP 129
Query: 133 NPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+ C +CL +F ++LRLLPKC+H FH+ CID WL H TCP CR L+
Sbjct: 130 GIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCRHCLV 181
>AT2G46493.1 | Symbols: | RING/U-box superfamily protein |
chr2:19080254-19081242 REVERSE LENGTH=184
Length = 184
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLK--NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTW 168
G+DQS I+T L N C +CL E+ ++ +R +P+C H FH+ECID W
Sbjct: 110 GLDQSTIETFKKMELGESRRLSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVW 169
Query: 169 LLSHSTCPLCRAS 181
L H +CPLCR S
Sbjct: 170 LKIHGSCPLCRNS 182
>AT2G17450.1 | Symbols: RHA3A | RING-H2 finger A3A |
chr2:7576640-7577197 REVERSE LENGTH=185
Length = 185
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 37/49 (75%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
+CA+CL +F +++R+LP C H+FH+ECID WL+S S+CP CR L P
Sbjct: 101 ECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCRRILTP 149
>AT1G49200.1 | Symbols: | RING/U-box superfamily protein |
chr1:18198298-18198978 FORWARD LENGTH=226
Length = 226
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLKNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
+ G+++ + PV + + L + C +CL +F +++R+LPKC H FH+ CID
Sbjct: 107 NKGINKKALRMFPVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDK 166
Query: 168 WLLSHSTCPLCRASLL 183
WL H TCP CR L+
Sbjct: 167 WLQQHLTCPKCRHCLV 182
>AT4G24015.1 | Symbols: | RING/U-box superfamily protein |
chr4:12469887-12471197 REVERSE LENGTH=174
Length = 174
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 118 DTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPL 177
D L V F +G ++ C VCL EFE +++L +P C H FH++CI WL SH+TCPL
Sbjct: 87 DKLHVVLFNEELGTRDSL-CCVCLGEFELKEELVEMPLCKHIFHLDCIHLWLYSHNTCPL 145
Query: 178 CRASL 182
CR+S+
Sbjct: 146 CRSSV 150
>AT5G06490.1 | Symbols: | RING/U-box superfamily protein |
chr5:1977996-1978589 REVERSE LENGTH=197
Length = 197
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C++CL +++ D +R+LP C+H FH C+D WL H TCP+CR S LP
Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLP 176
>AT2G17730.1 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705312 FORWARD LENGTH=241
Length = 241
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 132 KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
+N C+VCL +F+ + +R LP C H FH+ CID WLL H +CP+CR
Sbjct: 191 ENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCR 238
>AT2G44578.1 | Symbols: | RING/U-box superfamily protein |
chr2:18400864-18401301 REVERSE LENGTH=145
Length = 145
Score = 64.7 bits (156), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C +CL + +K+R + CSH FH++CID WL+ STCPLCRA + P
Sbjct: 70 CTICLEDAAEGEKMRRITACSHCFHVDCIDPWLMKKSTCPLCRAEIPP 117
>AT4G35840.1 | Symbols: | RING/U-box superfamily protein |
chr4:16981083-16982266 FORWARD LENGTH=236
Length = 236
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 11/79 (13%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFD-------CAVCLCEFEPEDKLRLLPKCSHAFHME 163
G+ +D +P K I KN D C+VCL +F+ + +R LP C H FH+
Sbjct: 162 GLTGDLVDKIP----KIKITGKNNLDASGNKDSCSVCLQDFQLGETVRSLPHCHHMFHLP 217
Query: 164 CIDTWLLSHSTCPLCRASL 182
CID WL H +CP+CR L
Sbjct: 218 CIDNWLFRHGSCPMCRRDL 236
>AT2G25410.1 | Symbols: | RING/U-box superfamily protein |
chr2:10814470-10815917 FORWARD LENGTH=377
Length = 377
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C +CL E+ ++ +R LP+C H FH ECID WL HS+CP+CR++ P
Sbjct: 327 CPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374
>AT1G28040.1 | Symbols: | RING/U-box superfamily protein |
chr1:9773580-9774910 REVERSE LENGTH=299
Length = 299
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)
Query: 93 SVTAXXXXXXXXXXXXDAGVDQSFIDTLPVFPFKAIIGL--KNPFDCAVCLCEFEPEDKL 150
++TA G+DQS I++ L N C +CL E+ ++ +
Sbjct: 207 AITARNTTQQPRGVVVTTGLDQSTIESYKKVELGESRRLPGTNGIICPICLSEYASKETV 266
Query: 151 RLLPKCSHAFHMECIDTWLLSHSTCPLCRAS 181
R +P+C H FH++CID WL HS+CP+CR S
Sbjct: 267 RCMPECDHCFHVQCIDEWLKIHSSCPVCRNS 297
>AT4G11360.1 | Symbols: RHA1B | RING-H2 finger A1B |
chr4:6906066-6906539 FORWARD LENGTH=157
Length = 157
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Query: 120 LPVFPFKAIIGLKNPFDCA-VCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL--SHSTCP 176
+PV F + L +P DC VCL +F +DK+R LPKC H FH C+D W++ + TCP
Sbjct: 69 IPVVRFSDL--LTDPEDCCTVCLSDFVSDDKIRQLPKCGHVFHHRCLDRWIVDCNKITCP 126
Query: 177 LCRASLLPE 185
+CR LPE
Sbjct: 127 ICRNRFLPE 135
>AT2G18670.1 | Symbols: | RING/U-box superfamily protein |
chr2:8093469-8094452 FORWARD LENGTH=181
Length = 181
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 111 GVDQSFIDTLPVFPF-KAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL 169
G+ F+ LP F F + + DC VC F R LP C H FH +C+DTWL
Sbjct: 83 GLSSRFVKKLPQFKFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWL 142
Query: 170 LSHSTCPLCRA 180
L STCP+CRA
Sbjct: 143 LKASTCPICRA 153
>AT5G66070.1 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=221
Length = 221
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
C+VCL +F+ + +R LP C H FH+ CID WL H++CPLCR L
Sbjct: 176 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 221
>AT5G66070.2 | Symbols: | RING/U-box superfamily protein |
chr5:26421923-26423033 FORWARD LENGTH=245
Length = 245
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
C+VCL +F+ + +R LP C H FH+ CID WL H++CPLCR L
Sbjct: 200 CSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCRRHL 245
>AT2G46495.1 | Symbols: | RING/U-box superfamily protein |
chr2:19084134-19085704 REVERSE LENGTH=372
Length = 372
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 111 GVDQSFIDTLPVFPF---KAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+D+S I++ + + G + C +CL E+ ++ +R +P+C H FH ECID
Sbjct: 291 GLDESIIESYKKTELGESRRLPGNNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDV 350
Query: 168 WLLSHSTCPLCRASLLP 184
WL H +CPLCR S P
Sbjct: 351 WLKIHGSCPLCRNSPSP 367
>AT1G74410.1 | Symbols: | RING/U-box superfamily protein |
chr1:27965723-27967681 FORWARD LENGTH=223
Length = 223
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%)
Query: 120 LPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
LP + + + + C +CL + + + R LPKC H FH+ C+D WL+ H +CP+CR
Sbjct: 159 LPCYIMSSEMVRRQVTHCTICLQDIKTGEITRSLPKCDHTFHLVCVDKWLIRHGSCPICR 218
Query: 180 ASL 182
++
Sbjct: 219 QAV 221
>AT2G37580.1 | Symbols: | RING/U-box superfamily protein |
chr2:15764745-15765452 FORWARD LENGTH=235
Length = 235
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
+C+VCL F D+LR L +C HAFH+ CI+TWL H CP+CR +
Sbjct: 141 ECSVCLMVFTDSDELRQLSECKHAFHVLCIETWLKDHPNCPICRTDV 187
>AT4G11370.1 | Symbols: RHA1A | RING-H2 finger A1A |
chr4:6907777-6908256 FORWARD LENGTH=159
Length = 159
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS--TCPLCRASLLPE 185
C VCL +FE +DK+R LPKC H FH C+D W++ ++ CP+CR LP+
Sbjct: 86 CTVCLSDFESDDKVRQLPKCGHVFHHYCLDRWIVDYNKMKCPVCRHRFLPK 136
>AT3G20395.1 | Symbols: | RING/U-box superfamily protein |
chr3:7112020-7113792 REVERSE LENGTH=223
Length = 223
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+ +S I +P+F ++ K+ C++CL ++E + R L +C H FHM CID WLL
Sbjct: 147 GLSKSSIQNIPMFYNRSEHQTKS--SCSICLQDWEEGEVGRKLARCGHTFHMNCIDEWLL 204
Query: 171 SHSTCPLCRASL 182
TCP+CR L
Sbjct: 205 RQETCPICRDHL 216
>AT5G36001.1 | Symbols: | RING/U-box superfamily protein |
chr5:14142050-14143143 FORWARD LENGTH=322
Length = 322
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR--ASLLPEFSANNN 191
C +CL E+ E+ ++ LP+C H FH ECID WL H++CP+CR S LP +A N
Sbjct: 264 CPICLSEYTSEETVKCLPECEHCFHTECIDPWLKLHNSCPVCRNSPSSLPNKAATTN 320
>AT5G45290.1 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=545
Length = 545
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Query: 116 FIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS-HST 174
+D LP+ + ++P C +CL E+E D +R LP C H FH C+D WL H
Sbjct: 470 VVDLLPIKLYTKSQS-EDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHRV 527
Query: 175 CPLCRASL 182
CPLCR +
Sbjct: 528 CPLCRGDI 535
>AT5G66160.1 | Symbols: ATRMR1, RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446878 FORWARD LENGTH=310
Length = 310
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 112 VDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 171
+D + TLP F F K CA+CL ++ + LRLLP C HAFH+ CID+WL
Sbjct: 207 LDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLTK 265
Query: 172 HST-CPLCRASLLPE 185
T CP+C+ + E
Sbjct: 266 WGTSCPVCKHDIRTE 280
>AT2G28920.1 | Symbols: | RING/U-box superfamily protein |
chr2:12418017-12418454 FORWARD LENGTH=145
Length = 145
Score = 61.2 bits (147), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRA 180
C +CL +F+ D +R+L +C H FH++CID+W TCP+CRA
Sbjct: 93 CVICLEDFKVNDVVRVLVRCKHVFHVDCIDSWCFYKLTCPICRA 136
>AT5G47610.1 | Symbols: | RING/U-box superfamily protein |
chr5:19301399-19301899 REVERSE LENGTH=166
Length = 166
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFS 187
+CA+CL EFE + +++L KC H FH++CI WL + S+CP CR S+ + S
Sbjct: 106 ECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCRTSIFSQHS 157
>AT3G60966.1 | Symbols: | RING/U-box superfamily protein |
chr3:22552718-22553137 FORWARD LENGTH=139
Length = 139
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 134 PFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANNNRS 193
PF CAVCL E E +K+R L C H FH +CIDTWL S CPLCRA + P A S
Sbjct: 60 PF-CAVCLQEAEEGEKMRRLTICRHCFHADCIDTWLSEMSKCPLCRAQIPPLPPA----S 114
Query: 194 PIVLVL 199
P++L+
Sbjct: 115 PMLLLF 120
>AT2G46494.1 | Symbols: | RING/U-box superfamily protein |
chr2:19082344-19083811 REVERSE LENGTH=362
Length = 362
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 31/45 (68%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRAS 181
C +CL E+ ++ +R +P+C H FH +CID WL H +CPLCR S
Sbjct: 316 CPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCRNS 360
>AT5G66160.2 | Symbols: RMR1 | receptor homology region
transmembrane domain ring H2 motif protein 1 |
chr5:26445198-26446722 FORWARD LENGTH=290
Length = 290
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 112 VDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLS 171
+D + TLP F F K CA+CL ++ + LRLLP C HAFH+ CID+WL
Sbjct: 207 LDAKLVHTLPCFTFTDSAHHKAGETCAICLEDYRFGESLRLLP-CQHAFHLNCIDSWLTK 265
Query: 172 HST-CPLCRASLLPE 185
T CP+C+ + E
Sbjct: 266 WGTSCPVCKHDIRTE 280
>AT2G44581.1 | Symbols: | RING/U-box superfamily protein |
chr2:18397996-18398433 REVERSE LENGTH=145
Length = 145
Score = 59.7 bits (143), Expect = 4e-09, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 33/57 (57%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANNNRS 193
C +CL +K+R + CSH FH++CID WL S CPLCRA + P N R+
Sbjct: 70 CTICLENATEGEKMRRIAACSHCFHVDCIDPWLEKKSMCPLCRAEIPPVPPGNPLRA 126
>AT1G22670.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:8021854-8023516 REVERSE
LENGTH=422
Length = 422
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 135 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHST-CPLCR 179
F CA+CL ++ DKLR+LP CSH FH+ C+D+WL+S T CP+C+
Sbjct: 230 FSCAICLEDYIVGDKLRVLP-CSHKFHVACVDSWLISWRTFCPVCK 274
>AT1G63840.1 | Symbols: | RING/U-box superfamily protein |
chr1:23689991-23690491 REVERSE LENGTH=166
Length = 166
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS--TCPLCRASLLPE 185
CAVCL +FE +D++R L C H FH C+D W++ ++ TCPLCR +P+
Sbjct: 89 CAVCLYDFENDDEIRRLTNCRHIFHRGCLDRWMMGYNQMTCPLCRTQFIPD 139
>AT3G11110.1 | Symbols: | RING/U-box superfamily protein |
chr3:3479979-3480455 FORWARD LENGTH=158
Length = 158
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 33/44 (75%)
Query: 139 VCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
+CL FE +K+++LP CSH +H EC+D WL + S+CPLCR S+
Sbjct: 109 ICLGGFEEGEKMKVLPPCSHCYHCECVDRWLKTESSCPLCRVSI 152
>AT4G11680.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr4:7053737-7055516 REVERSE LENGTH=390
Length = 390
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANN 190
+C +CLCE+E +LR LP C+H FH CID WL +S CPLC+ ++L +ANN
Sbjct: 337 ECCICLCEYEDGVELRELP-CNHHFHCTCIDKWLHINSRCPLCKFNILK--NANN 388
>AT3G47990.1 | Symbols: SIS3 | SUGAR-INSENSITIVE 3 |
chr3:17713367-17716051 REVERSE LENGTH=358
Length = 358
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 9/76 (11%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCA---VCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
++ I LP F KA+ P DC +CL EF ++R LP C+H FH+ECID WL
Sbjct: 214 EALIQELPKFRLKAV-----PDDCGECLICLEEFHIGHEVRGLP-CAHNFHVECIDQWLR 267
Query: 171 SHSTCPLCRASLLPEF 186
+ CP CR S+ P+
Sbjct: 268 LNVKCPRCRCSVFPDL 283
>AT5G45290.2 | Symbols: | RING/U-box superfamily protein |
chr5:18350011-18352092 REVERSE LENGTH=546
Length = 546
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 116 FIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL--LSHS 173
+D LP+ + ++P C +CL E+E D +R LP C H FH C+D WL +
Sbjct: 470 VVDLLPIKLYTKSQS-EDPSQCYICLVEYEEADSIRTLP-CHHEFHKTCVDKWLKEIHSR 527
Query: 174 TCPLCRASL 182
CPLCR +
Sbjct: 528 VCPLCRGDI 536
>AT5G59550.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:23998422-23999645 REVERSE
LENGTH=407
Length = 407
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL--LPEFSANNNRS 193
+CAVC FE E + R +P C H FH +CI WL ++CP+CR L P +NNN
Sbjct: 198 NCAVCTEIFETETEAREMP-CKHLFHDDCIVPWLSIRNSCPVCRFELPSEPNRRSNNNEE 256
Query: 194 PIVLVLESGSDSSREIVPEGGGAIGRTSSVMTTHSRL----------GCCGESEFGSTRV 243
++ + +P GG A+GR ++ M R+ G G S+ G R+
Sbjct: 257 ------DNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGIGNSQDGPRRI 310
Query: 244 DLPRKSGEL 252
R G L
Sbjct: 311 SWVRSHGTL 319
>AT5G41400.1 | Symbols: | RING/U-box superfamily protein |
chr5:16569584-16570114 REVERSE LENGTH=176
Length = 176
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS--TCPLCRASLL 183
CAVCL EFE +D++R L C H FH C+D W++ ++ TCPLCR +
Sbjct: 105 CAVCLHEFENDDEIRRLTNCQHIFHRSCLDRWMMGYNQMTCPLCRTPFI 153
>AT4G00305.1 | Symbols: | RING/U-box superfamily protein |
chr4:131550-131930 FORWARD LENGTH=126
Length = 126
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 118 DTLPVFPFKAIIGLKNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS-TC 175
D LP F+ I NP + C +C EF+ D++R L C H +H CID W+ TC
Sbjct: 51 DMLPATKFEDISSRVNPPESCRICQDEFDGGDEVRCLRNCVHVYHKTCIDRWIQDDKMTC 110
Query: 176 PLCRASLLPEF 186
PLCR ++P+F
Sbjct: 111 PLCRTPIVPDF 121
>AT1G51930.1 | Symbols: | RING/U-box superfamily protein |
chr1:19294838-19295236 REVERSE LENGTH=132
Length = 132
Score = 58.2 bits (139), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
C +CL E+E + ++R L C H FH+ CID+WL CP CR S+
Sbjct: 80 CPICLEEYEDDHQIRRLRNCGHVFHLLCIDSWLTQKQNCPSCRRSV 125
>AT1G71980.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr1:27098250-27099881 FORWARD
LENGTH=448
Length = 448
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 135 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHST-CPLCR 179
F CA+CL ++ DKLRLLP C H FH C+D+WL S T CP+C+
Sbjct: 230 FTCAICLEDYTVGDKLRLLP-CCHKFHAACVDSWLTSWRTFCPVCK 274
>AT1G53010.1 | Symbols: | RING/U-box superfamily protein |
chr1:19747847-19748383 FORWARD LENGTH=178
Length = 178
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 45/85 (52%), Gaps = 14/85 (16%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKN----------PFDCAVCLCEFEPEDKLRLLPKCSHAF 160
G+ QS I+TL P K ++G N +CA+CL + ++ R+ P C H +
Sbjct: 97 GLKQSVIETL--LP-KLLVGQGNHEEDEEKSLESRECAICLSGYVVNEECRVFPVCRHIY 153
Query: 161 HMECIDTWLLSHSTCPLCRASLLPE 185
H CID WL +H TCP CR LPE
Sbjct: 154 HALCIDAWLKNHLTCPTCRKD-LPE 177
>AT1G55530.1 | Symbols: | RING/U-box superfamily protein |
chr1:20729472-20730527 REVERSE LENGTH=351
Length = 351
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 127 AIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
A + ++ C+VCL +FE + +L+P C+H FH +C+ WL HS+CP+CR L
Sbjct: 213 ATVKIEETLQCSVCLDDFEIGTEAKLMP-CTHKFHSDCLLPWLELHSSCPVCRYQL 267
>AT4G30370.1 | Symbols: | RING/U-box superfamily protein |
chr4:14858743-14859273 REVERSE LENGTH=176
Length = 176
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
DC VC+ F R LP+C H FH +C+D WL+ STCP+CR
Sbjct: 114 DCVVCIDGFRQGQWCRKLPRCGHVFHRKCVDLWLIKVSTCPICR 157
>AT1G63170.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:23425574-23427073 FORWARD
LENGTH=381
Length = 381
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+C +CL +E E +LR LP C H FH C+D WL ++TCPLC+ ++L
Sbjct: 324 ECCICLSAYEDETELRELP-CGHHFHCGCVDKWLYINATCPLCKYNIL 370
>AT4G17245.1 | Symbols: | RING/U-box superfamily protein |
chr4:9669383-9669883 FORWARD LENGTH=166
Length = 166
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 109 DAGVDQSFIDTLPVFPFKAIIGLK-NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
D ++ + D P + + L N +C +CL EF+ D LR+L +C H FH+ CI
Sbjct: 73 DPDLEATHPDAPPTLVYSPGLNLAGNEAECIICLSEFQDGDTLRVLERCKHGFHVYCIQK 132
Query: 168 WL-LSHSTCPLCRASLL 183
WL SHS+CP CR ++
Sbjct: 133 WLSSSHSSCPTCRTNIF 149
>AT3G61180.1 | Symbols: | RING/U-box superfamily protein |
chr3:22645680-22647290 FORWARD LENGTH=379
Length = 379
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+C++CLC +E +LR LP C H FH C+D WL ++TCPLC+ ++L
Sbjct: 322 ECSICLCAYEDGVELRELP-CRHHFHSLCVDKWLRINATCPLCKFNIL 368
>AT1G12760.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348728-4350512 FORWARD LENGTH=408
Length = 408
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 131 LKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANN 190
L+ +C +CL +E +LR LP C H FH C+D WL ++TCPLC+ ++L S+N
Sbjct: 347 LQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILK--SSNL 403
Query: 191 NRSPI 195
+R +
Sbjct: 404 DREEV 408
>AT4G26580.2 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 109 DAGVDQSFIDTLPVFPFKAI------IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHM 162
+ G I +LP + +K I N +C +CL +++ ++++R LP CSH FH+
Sbjct: 255 EKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHL 313
Query: 163 ECIDTWLLSHSTCPLCRASL 182
+C+D WL S CPLC+ L
Sbjct: 314 KCVDQWLRIISCCPLCKQDL 333
>AT4G26580.1 | Symbols: | RING/U-box superfamily protein |
chr4:13411705-13412889 REVERSE LENGTH=335
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 109 DAGVDQSFIDTLPVFPFKAI------IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHM 162
+ G I +LP + +K I N +C +CL +++ ++++R LP CSH FH+
Sbjct: 255 EKGASDDQISSLPSWKYKLIDETSDSSQANNDPECCICLAKYKEKEEVRKLP-CSHRFHL 313
Query: 163 ECIDTWLLSHSTCPLCRASL 182
+C+D WL S CPLC+ L
Sbjct: 314 KCVDQWLRIISCCPLCKQDL 333
>AT3G58720.2 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717908 REVERSE LENGTH=266
Length = 266
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
C+VCL +FEP++ + L P C H FH ECI WL + CP+CR +L
Sbjct: 172 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVIL 217
>AT5G56340.1 | Symbols: ATCRT1 | RING/U-box superfamily protein |
chr5:22818254-22819444 FORWARD LENGTH=396
Length = 396
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 129 IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
+ + P C+VCL +FE + + +P C H FH+ CI WL HS+CP+CR L
Sbjct: 251 VKIMEPLQCSVCLDDFEKGTEAKEMP-CKHKFHVRCIVPWLELHSSCPVCRFEL 303
>AT5G41450.1 | Symbols: | RING/U-box superfamily protein |
chr5:16588600-16589094 REVERSE LENGTH=164
Length = 164
Score = 56.2 bits (134), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 115 SFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHST 174
++I + FK I N C +CL EFE ++ + C H FH CID WL + T
Sbjct: 88 TWIHETTILEFKDIKEGSNKIFCPICLEEFEDGHEIIRINMCRHVFHRFCIDPWLNQNLT 147
Query: 175 CPLCRASL 182
CP CR SL
Sbjct: 148 CPNCRCSL 155
>AT1G12760.2 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:4348941-4350512 FORWARD LENGTH=337
Length = 337
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 131 LKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSANN 190
L+ +C +CL +E +LR LP C H FH C+D WL ++TCPLC+ ++L S+N
Sbjct: 276 LQEDAECCICLSAYEDGTELRELP-CGHHFHCSCVDKWLYINATCPLCKYNILK--SSNL 332
Query: 191 NRSPI 195
+R +
Sbjct: 333 DREEV 337
>AT4G26400.1 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+ +D LP + + C++CL +F+ + + +P C H FH+ CI WL HS
Sbjct: 224 KEVVDNLPT------VKISESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHS 276
Query: 174 TCPLCRASLLPE 185
+CP+CR L P+
Sbjct: 277 SCPVCRYELPPD 288
>AT4G26400.2 | Symbols: | RING/U-box superfamily protein |
chr4:13344953-13346023 REVERSE LENGTH=356
Length = 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%), Gaps = 7/72 (9%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+ +D LP + + C++CL +F+ + + +P C H FH+ CI WL HS
Sbjct: 224 KEVVDNLPT------VKISESLQCSICLDDFDKGSEAKEMP-CKHKFHIRCIVPWLELHS 276
Query: 174 TCPLCRASLLPE 185
+CP+CR L P+
Sbjct: 277 SCPVCRYELPPD 288
>AT1G26800.1 | Symbols: | RING/U-box superfamily protein |
chr1:9285576-9286190 REVERSE LENGTH=204
Length = 204
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 117 IDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCP 176
ID +P+ G +C +CL E++ E+ ++ +P C H FH CI+ WL H +CP
Sbjct: 98 IDAMPIVEIDGCEG-----ECVICLEEWKSEETVKEMP-CKHRFHGGCIEKWLGFHGSCP 151
Query: 177 LCRASL 182
+CR +
Sbjct: 152 VCRYEM 157
>AT3G58720.1 | Symbols: | RING/U-box superfamily protein |
chr3:21716920-21717892 REVERSE LENGTH=238
Length = 238
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
C+VCL +FEP++ + L P C H FH ECI WL + CP+CR +L
Sbjct: 144 CSVCLEDFEPKETVMLTP-CKHMFHEECIVPWLKTKGQCPVCRFVIL 189
>AT1G80400.1 | Symbols: | RING/U-box superfamily protein |
chr1:30225864-30227360 FORWARD LENGTH=407
Length = 407
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
C +CL + ++++R LP CSH FH++C+D WL ++TCPLC+
Sbjct: 355 CCICLTRYGDDEQVRELP-CSHVFHVDCVDKWLKINATCPLCK 396
>AT4G32600.1 | Symbols: | RING/U-box superfamily protein |
chr4:15724010-15725737 FORWARD LENGTH=453
Length = 453
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
C +CL ++ ++LR LP CSH FH EC+D WL +++CPLC++ +
Sbjct: 363 CCICLAKYANNEELRELP-CSHFFHKECVDKWLKINASCPLCKSEV 407
>AT3G02340.1 | Symbols: | RING/U-box superfamily protein |
chr3:477032-478261 FORWARD LENGTH=409
Length = 409
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S I LPV K CAVC E E+K+R LP CSH +H ECI WL +
Sbjct: 312 KSVIQDLPVVELAVEELDKGNNVCAVCKDEMLVEEKVRRLP-CSHFYHGECIIPWLGIRN 370
Query: 174 TCPLCRASL 182
TCP+CR L
Sbjct: 371 TCPVCRYEL 379
>AT5G20885.1 | Symbols: | RING/U-box superfamily protein |
chr5:7084133-7084663 REVERSE LENGTH=176
Length = 176
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 33/62 (53%), Gaps = 15/62 (24%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL---------------LSHSTCPLCRAS 181
CAVCL + E D++R L CSH FH ECID WL +H TCPLCR
Sbjct: 82 CAVCLGDLEDGDEVRELRNCSHMFHRECIDRWLDYECCGGDENNEGEEDNHRTCPLCRTP 141
Query: 182 LL 183
LL
Sbjct: 142 LL 143
>AT3G19910.1 | Symbols: | RING/U-box superfamily protein |
chr3:6926497-6929324 FORWARD LENGTH=340
Length = 340
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
C +C ++E ++ L LLP C H++H ECI+ WL + CP+C A +
Sbjct: 288 CVICRLDYEDDEDLILLP-CKHSYHSECINNWLKINKVCPVCSAEV 332
>AT2G40830.3 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S ID LP + +C VC EFE + + +P C+H +H +CI WL+ H+
Sbjct: 167 RSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHN 225
Query: 174 TCPLCRASL 182
+CP+CR L
Sbjct: 226 SCPVCRQEL 234
>AT2G40830.1 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S ID LP + +C VC EFE + + +P C+H +H +CI WL+ H+
Sbjct: 167 RSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHN 225
Query: 174 TCPLCRASL 182
+CP+CR L
Sbjct: 226 SCPVCRQEL 234
>AT2G40830.2 | Symbols: RHC1A | RING-H2 finger C1A |
chr2:17043642-17044628 FORWARD LENGTH=328
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S ID LP + +C VC EFE + + +P C+H +H +CI WL+ H+
Sbjct: 167 RSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMP-CNHIYHSDCIVPWLVQHN 225
Query: 174 TCPLCRASL 182
+CP+CR L
Sbjct: 226 SCPVCRQEL 234
>AT5G55970.2 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
+C +CL +++ ++++R LP CSH FH +C+D WL S CPLC+ L
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT5G55970.1 | Symbols: | RING/U-box superfamily protein |
chr5:22668019-22669312 FORWARD LENGTH=343
Length = 343
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
+C +CL +++ ++++R LP CSH FH +C+D WL S CPLC+ L
Sbjct: 296 ECCICLAKYKDKEEVRKLP-CSHKFHSKCVDQWLRIISCCPLCKQDL 341
>AT3G56580.3 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S ID LP + C VC EFE + + + +P C H +H +CI WL+ H+
Sbjct: 163 KSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHN 221
Query: 174 TCPLCRASL 182
+CP+CR L
Sbjct: 222 SCPVCRKEL 230
>AT3G56580.1 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S ID LP + C VC EFE + + + +P C H +H +CI WL+ H+
Sbjct: 163 KSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHN 221
Query: 174 TCPLCRASL 182
+CP+CR L
Sbjct: 222 SCPVCRKEL 230
>AT3G56580.2 | Symbols: | RING/U-box superfamily protein |
chr3:20962563-20963525 FORWARD LENGTH=320
Length = 320
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+S ID LP + C VC EFE + + + +P C H +H +CI WL+ H+
Sbjct: 163 KSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMP-CHHIYHSDCIVPWLVQHN 221
Query: 174 TCPLCRASL 182
+CP+CR L
Sbjct: 222 SCPVCRKEL 230
>AT2G17730.2 | Symbols: NIP2 | NEP-interacting protein 2 |
chr2:7704142-7705436 FORWARD LENGTH=253
Length = 253
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 6/58 (10%)
Query: 132 KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS-----TCPLCRASLLP 184
+N C+VCL +F+ + +R LP C H FH+ CID WLL H T +C A LLP
Sbjct: 191 ENTDSCSVCLQDFQLGETVRSLPHCHHMFHLPCIDNWLLRHDISTARTSRVCSA-LLP 247
>AT5G08139.1 | Symbols: | RING/U-box superfamily protein |
chr5:2616487-2617617 FORWARD LENGTH=376
Length = 376
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 114 QSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHS 173
+SF++ LPV + CAVC E +K LP C+H +H ECI WL +
Sbjct: 286 KSFLNNLPVVLLEGENDDDGGLVCAVCKDEMNIGNKAVQLP-CNHKYHSECIVPWLKVRN 344
Query: 174 TCPLCRASL 182
TCP+CR L
Sbjct: 345 TCPVCRYEL 353
>AT2G34000.1 | Symbols: | RING/U-box superfamily protein |
chr2:14365177-14365632 FORWARD LENGTH=151
Length = 151
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 8/75 (10%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNP------FDCAVCLCEFEPEDKLRLLPKCSHAFHMEC 164
G+ S I P F +K +P +C VCL +++LP C H F EC
Sbjct: 61 GLSASVIAAFPTFSYKP--DNNDPESNNQEIECPVCLGLIPKNVVIKVLPNCMHMFDEEC 118
Query: 165 IDTWLLSHSTCPLCR 179
I WL SH+TCP+CR
Sbjct: 119 IGKWLESHATCPVCR 133
>AT1G14200.1 | Symbols: | RING/U-box superfamily protein |
chr1:4854532-4855071 REVERSE LENGTH=179
Length = 179
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
CA+CL E+ D +P C H FH +C++ WL H+TCP+CR +
Sbjct: 109 CAICLDEWSKGDVAAEMP-CKHKFHSKCVEEWLGRHATCPMCRYEM 153
>AT3G19950.1 | Symbols: | RING/U-box superfamily protein |
chr3:6942853-6943839 FORWARD LENGTH=328
Length = 328
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
CAVC+ EFE ++ +P C H FH +C+ WL H++CP+CR L
Sbjct: 216 CAVCMDEFEDGSDVKQMP-CKHVFHQDCLLPWLELHNSCPVCRFEL 260
>AT2G03000.1 | Symbols: | RING/U-box superfamily protein |
chr2:875233-877207 FORWARD LENGTH=535
Length = 535
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
+C +C E+ D LP C H +H+EC++ WL H++CP CR L
Sbjct: 480 ECVICFEEWSKSDMETELP-CKHKYHLECVEKWLKIHTSCPQCRYKL 525
>AT5G41430.1 | Symbols: | RING/U-box superfamily protein |
chr5:16586119-16586604 REVERSE LENGTH=161
Length = 161
Score = 52.4 bits (124), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 132 KNPFD---CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
K FD C++CL E E ++ + KC H FH CID+WL + +CP CR
Sbjct: 109 KEGFDEIGCSICLEELEDGHEIIRIKKCRHVFHRSCIDSWLKQNRSCPNCR 159
>AT3G30460.1 | Symbols: | RING/U-box superfamily protein |
chr3:12104433-12104876 FORWARD LENGTH=147
Length = 147
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 2/63 (3%)
Query: 118 DTLPVFPFKAIIGLKNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCP 176
+ LPV F A ++ CA+C E ++L LP C H +H ECI WL + +TCP
Sbjct: 77 EELPVVEFTAEEMMERGLVVCAICREELAANERLSELP-CRHYYHKECISNWLSNRNTCP 135
Query: 177 LCR 179
LCR
Sbjct: 136 LCR 138
>AT4G09560.1 | Symbols: | Protease-associated (PA) RING/U-box zinc
finger family protein | chr4:6041652-6043681 REVERSE
LENGTH=448
Length = 448
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL-LSHSTCPLCR 179
C +CL +E DKLR+LP C H FH+ C+D WL S CP+C+
Sbjct: 234 CCICLENYEKGDKLRILP-CHHKFHVACVDLWLGQRKSFCPVCK 276
>AT3G63530.2 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 111 GVDQSFIDTLPV--FPFKAIIGLKNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+ Q I+TLP + F +I K + C +C +++ ++ LP C H +H ECI
Sbjct: 168 GLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECISK 226
Query: 168 WLLSHSTCPLCRASLLPE 185
WL + CP+C + + E
Sbjct: 227 WLSINKVCPVCNSEVFGE 244
>AT3G63530.1 | Symbols: BB, BB2 | RING/U-box superfamily protein |
chr3:23456407-23457787 REVERSE LENGTH=248
Length = 248
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 111 GVDQSFIDTLPV--FPFKAIIGLKNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDT 167
G+ Q I+TLP + F +I K + C +C +++ ++ LP C H +H ECI
Sbjct: 168 GLSQELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECISK 226
Query: 168 WLLSHSTCPLCRASLLPE 185
WL + CP+C + + E
Sbjct: 227 WLSINKVCPVCNSEVFGE 244
>AT5G52140.1 | Symbols: | RING/U-box superfamily protein |
chr5:21184566-21186872 REVERSE LENGTH=280
Length = 280
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C++CL E+ DK+ LP C H +H +CI WL + C +C+A + P
Sbjct: 234 CSICLMEYAKGDKITTLP-CKHIYHKDCISQWLKQNKVCCICKAEVYP 280
>AT1G67856.1 | Symbols: | RING/U-box superfamily protein |
chr1:25442486-25442887 FORWARD LENGTH=133
Length = 133
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 132 KNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWL-LSHSTCPLCRASL 182
+ DC VCLC F+ E+++ L C H FH C+D W +H+TCPLCR+ L
Sbjct: 82 REAMDCCVCLCGFKEEEEVSELVSCKHYFHSACLDKWFGNNHTTCPLCRSIL 133
>AT5G41440.1 | Symbols: | RING/U-box superfamily protein |
chr5:16587235-16587609 REVERSE LENGTH=124
Length = 124
Score = 51.2 bits (121), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 137 CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASL 182
C++CL EF+ +L + KC H FH C+ +W+ ++ CP+CR S+
Sbjct: 78 CSICLEEFKIGHELMCIKKCRHVFHRFCMLSWIDANRNCPICRCSV 123
>AT2G01735.1 | Symbols: RIE1 | RING-finger protein for embryogenesis
| chr2:324499-325895 FORWARD LENGTH=359
Length = 359
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 28/100 (28%)
Query: 111 GVDQSFIDTLPVFPFKA-------IIG--------------------LKNPFDCAVCLCE 143
GV ++ + LP++ FKA I G L DC +CL
Sbjct: 254 GVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSS 313
Query: 144 FEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
+E +L LP C+H FH CI WL +TCPLC+ ++L
Sbjct: 314 YEDGAELHALP-CNHHFHSTCIVKWLKMRATCPLCKYNIL 352
>AT1G65040.1 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24161992 REVERSE LENGTH=281
Length = 281
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 133 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP----EFSA 188
N C +C E KL C H FH+ C+ +WL +TCP CRA ++P +A
Sbjct: 109 NDATCIICREEMTSAKKL----VCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTA 164
Query: 189 NNNRSPIVLVLESGSDSS 206
+ NR P L+ G+ +S
Sbjct: 165 SGNRGPHQESLQQGTGTS 182
>AT1G68070.1 | Symbols: | Zinc finger, C3HC4 type (RING finger)
family protein | chr1:25515412-25516767 REVERSE
LENGTH=343
Length = 343
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 136 DCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
DC +CL +E +L LP C+H FH CI WL ++TCPLC+ ++L
Sbjct: 291 DCCICLSSYEDGAELVSLP-CNHHFHSTCIVKWLKMNATCPLCKFNIL 337
>AT3G10815.1 | Symbols: | RING/U-box superfamily protein |
chr3:3385009-3385608 REVERSE LENGTH=199
Length = 199
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 129 IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSA 188
+GL +P+ C VC +FE R +P C H +H ECI WL+ +TCP+CR LP+
Sbjct: 115 LGL-DPY-CPVCQDQFEIGSDARKMP-CKHIYHSECILPWLVQRNTCPVCRKE-LPQDRN 170
Query: 189 NNNRSPI 195
N+ ++P+
Sbjct: 171 NSRKNPL 177
>AT1G65040.3 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=389
Length = 389
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 133 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP----EFSA 188
N C +C E KL C H FH+ C+ +WL +TCP CRA ++P +A
Sbjct: 217 NDATCIICREEMTSAKKL----VCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTA 272
Query: 189 NNNRSPIVLVLESGSDSS 206
+ NR P L+ G+ +S
Sbjct: 273 SGNRGPHQESLQQGTGTS 290
>AT3G47180.1 | Symbols: | RING/U-box superfamily protein |
chr3:17372821-17373453 REVERSE LENGTH=210
Length = 210
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 132 KNPFD-CAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLC 178
KN D C VC EFE + L +L C H +H ECI WL + CP+C
Sbjct: 156 KNEIDRCVVCQMEFEERESLVVLRPCDHPYHSECITKWLETKKICPIC 203
>AT3G13430.3 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 135 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C+VCL +FE + + +P C H FH +C+ WL HS+CP+CR LLP
Sbjct: 223 LQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRY-LLP 270
>AT3G13430.2 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 135 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C+VCL +FE + + +P C H FH +C+ WL HS+CP+CR LLP
Sbjct: 223 LQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRY-LLP 270
>AT3G13430.1 | Symbols: | RING/U-box superfamily protein |
chr3:4367754-4368701 FORWARD LENGTH=315
Length = 315
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 135 FDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP 184
C+VCL +FE + + +P C H FH +C+ WL HS+CP+CR LLP
Sbjct: 223 LQCSVCLDDFEIGMEAKEMP-CKHKFHSDCLLPWLELHSSCPVCRY-LLP 270
>AT1G65040.2 | Symbols: | RING/U-box superfamily protein |
chr1:24160105-24163365 REVERSE LENGTH=460
Length = 460
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 39/78 (50%), Gaps = 8/78 (10%)
Query: 133 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLP----EFSA 188
N C +C E KL C H FH+ C+ +WL +TCP CRA ++P +A
Sbjct: 288 NDATCIICREEMTSAKKL----VCGHLFHVHCLRSWLERQNTCPTCRALVVPAENATSTA 343
Query: 189 NNNRSPIVLVLESGSDSS 206
+ NR P L+ G+ +S
Sbjct: 344 SGNRGPHQESLQQGTGTS 361
>AT3G55530.1 | Symbols: SDIR1 | RING/U-box superfamily protein |
chr3:20595300-20597188 REVERSE LENGTH=273
Length = 273
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 130 GLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCR 179
G ++ C+VCL + + +R LP C H FH CID WL TCP+C+
Sbjct: 204 GTEDELTCSVCLEQVTVGEIVRTLP-CLHQFHAGCIDPWLRQQGTCPVCK 252
>AT1G49850.1 | Symbols: | RING/U-box superfamily protein |
chr1:18455326-18456444 REVERSE LENGTH=250
Length = 250
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 111 GVDQSFIDTLPVFPFKAIIGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLL 170
G+ Q I+ L F + DC++CL F D L LP C+H+FH C++ WL
Sbjct: 177 GLTQDAINCLHRQTFSSAEVKSEMRDCSICLESFTKGDMLISLP-CTHSFHSSCLNPWLR 235
Query: 171 SHSTCPLCRASLLPE 185
+ CP CR ++ E
Sbjct: 236 ACGDCPCCRRAIAKE 250
>AT5G41350.1 | Symbols: | RING/U-box superfamily protein |
chr5:16542026-16543092 REVERSE LENGTH=212
Length = 212
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 126 KAI-IGLKNPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLL 183
KA+ I ++ DC +CL E++ E+ +L+ KC H FH+ CI W+ TCP+C ++
Sbjct: 149 KAVFIPIEEEEDCPICLEEYDIENP-KLVAKCDHHFHLACILEWMERSETCPVCNKEMV 206