Miyakogusa Predicted Gene

Lj4g3v2018300.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2018300.1 NODE_12039_length_1727_cov_60.621307.path2.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30490.1 | Symbols:  | AFG1-like ATPase family protein | chr4...   271   2e-73
AT4G28070.2 | Symbols:  | AFG1-like ATPase family protein | chr4...   251   2e-67
AT4G28070.1 | Symbols:  | AFG1-like ATPase family protein | chr4...   226   4e-60
AT2G25530.1 | Symbols:  | AFG1-like ATPase family protein | chr2...    87   7e-18

>AT4G30490.1 | Symbols:  | AFG1-like ATPase family protein |
           chr4:14899226-14901883 REVERSE LENGTH=497
          Length = 497

 Score =  271 bits (692), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 136/147 (92%)

Query: 1   MGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHR 60
           MGR L +PLGANGCAYFPFEELCD+PLGAADYFGLFK FHTLALD IPVFG+ N++AA+R
Sbjct: 348 MGRKLQIPLGANGCAYFPFEELCDRPLGAADYFGLFKKFHTLALDEIPVFGLHNRTAAYR 407

Query: 61  FVTLIDVMYENRARLLCTADGSPQDLFEKVVTVSEAKQMAPRTSSRSRKNDVIDLCVDNE 120
           FVTL+DVMYENRARLLCTA+ +PQ+L EK++T+SEAK M PRTSSRSRKNDV +LCVDNE
Sbjct: 408 FVTLVDVMYENRARLLCTAEANPQELLEKIITISEAKSMGPRTSSRSRKNDVTELCVDNE 467

Query: 121 LGFAKDRTISRLTELNSKEYLEHHAAT 147
           LGFAKDRTISRLTE+NSKEYLEHHA T
Sbjct: 468 LGFAKDRTISRLTEMNSKEYLEHHAIT 494


>AT4G28070.2 | Symbols:  | AFG1-like ATPase family protein |
           chr4:13946009-13948462 FORWARD LENGTH=473
          Length = 473

 Score =  251 bits (640), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 114/152 (75%), Positives = 136/152 (89%)

Query: 1   MGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHR 60
           MGR L VPL A+GCAYF FEELCD+PLGAADY GLFK FHTLAL+G+P FG+ N++AA+R
Sbjct: 319 MGRKLQVPLAADGCAYFLFEELCDRPLGAADYLGLFKKFHTLALEGVPFFGLHNRTAAYR 378

Query: 61  FVTLIDVMYENRARLLCTADGSPQDLFEKVVTVSEAKQMAPRTSSRSRKNDVIDLCVDNE 120
           FVTL+DVMYEN+ARLLCTA+GSP +L E++VT+S+A+Q+APRTSSRSRK+D  DLCVDNE
Sbjct: 379 FVTLVDVMYENKARLLCTAEGSPLELLERIVTISDAQQIAPRTSSRSRKSDDPDLCVDNE 438

Query: 121 LGFAKDRTISRLTELNSKEYLEHHAATLAEKK 152
           LGFAKDRTISRLTE+NSKEYLE H+  L EK+
Sbjct: 439 LGFAKDRTISRLTEMNSKEYLEQHSRMLQEKQ 470


>AT4G28070.1 | Symbols:  | AFG1-like ATPase family protein |
           chr4:13946009-13948462 FORWARD LENGTH=464
          Length = 464

 Score =  226 bits (577), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 106/152 (69%), Positives = 127/152 (83%), Gaps = 9/152 (5%)

Query: 1   MGRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHR 60
           MGR L VPL A+GCAYF FEELCD+PLGAADY GLF          +P FG+ N++AA+R
Sbjct: 319 MGRKLQVPLAADGCAYFLFEELCDRPLGAADYLGLFS---------VPFFGLHNRTAAYR 369

Query: 61  FVTLIDVMYENRARLLCTADGSPQDLFEKVVTVSEAKQMAPRTSSRSRKNDVIDLCVDNE 120
           FVTL+DVMYEN+ARLLCTA+GSP +L E++VT+S+A+Q+APRTSSRSRK+D  DLCVDNE
Sbjct: 370 FVTLVDVMYENKARLLCTAEGSPLELLERIVTISDAQQIAPRTSSRSRKSDDPDLCVDNE 429

Query: 121 LGFAKDRTISRLTELNSKEYLEHHAATLAEKK 152
           LGFAKDRTISRLTE+NSKEYLE H+  L EK+
Sbjct: 430 LGFAKDRTISRLTEMNSKEYLEQHSRMLQEKQ 461


>AT2G25530.1 | Symbols:  | AFG1-like ATPase family protein |
           chr2:10863059-10866597 FORWARD LENGTH=655
          Length = 655

 Score = 86.7 bits (213), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 81/160 (50%), Gaps = 19/160 (11%)

Query: 2   GRTLHVPLGANGCAYFPFEELCDKPLGAADYFGLFKNFHTLALDGIPVFGVSNKSAAHRF 61
           GRT+ VP   +G A F FE LC +P+GAADY  + KN+HT+ +  IP   +  +  A RF
Sbjct: 483 GRTVEVPESCSGVARFTFEYLCGRPVGAADYIAVAKNYHTIFISDIPAMSMEIRDKARRF 542

Query: 62  VTLIDVMYENRARLLCTADGSPQDLFEKVVTVS----EAKQMAPRTS-SRSRKN------ 110
           +TL+D +Y +   L+ +A+ +  +LF+     +    E+ Q    T  SR R++      
Sbjct: 543 ITLVDELYNHHCCLVSSAETAIDELFQGTAEGTLFDLESFQFETETEDSRLRRDVLAEGS 602

Query: 111 --------DVIDLCVDNELGFAKDRTISRLTELNSKEYLE 142
                    ++ +    E  FA  R  SRL E+ +  YLE
Sbjct: 603 ISAAGSPSSIVSMLSGEEEMFAFARAASRLIEMQTPLYLE 642