Miyakogusa Predicted Gene

Lj4g3v2018270.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2018270.2 tr|G7JED6|G7JED6_MEDTR Autophagy-related protein
OS=Medicago truncatula GN=MTR_4g130190 PE=4 SV=1,87.99,0,WD40
repeat-like,WD40-repeat-containing domain; no description,WD40/YVTN
repeat-like-containing doma,CUFF.50108.2
         (365 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30510.1 | Symbols: ATATG18B, ATG18B, G18B | homolog of yeast...   456   e-128
AT4G30510.2 | Symbols: ATATG18B | homolog of yeast autophagy 18 ...   388   e-108
AT3G62770.3 | Symbols: AtATG18a | Transducin/WD40 repeat-like su...   171   1e-42
AT3G62770.1 | Symbols: AtATG18a | Transducin/WD40 repeat-like su...   170   1e-42
AT3G56440.1 | Symbols: ATATG18D, ATG18D | homolog of yeast autop...   164   1e-40
AT2G40810.2 | Symbols: ATATG18C, ATG18C | homolog of yeast autop...   156   2e-38
AT2G40810.1 | Symbols: ATATG18C, ATG18C | homolog of yeast autop...   156   2e-38
AT5G05150.1 | Symbols: ATATG18E, ATG18E, G18E | autophagy-relate...   128   7e-30

>AT4G30510.1 | Symbols: ATATG18B, ATG18B, G18B | homolog of yeast
           autophagy 18 (ATG18) B | chr4:14905299-14906915 REVERSE
           LENGTH=312
          Length = 312

 Score =  456 bits (1173), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 219/310 (70%), Positives = 260/310 (83%), Gaps = 1/310 (0%)

Query: 50  MLFSSSLLAIVGAGDQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQD 109
           ML+SS LLAIVGAG+Q +LSPRRLCLF TTTG  LRELNFLTSILAVRMN+KRL+V+L +
Sbjct: 1   MLYSSDLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLE 60

Query: 110 KAYVYDLNSLTILDTIDTVPNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHC 169
           K +VYDLN+L +LDTIDTVPN KGL AFSP L+ C+LA+PASTTKGS L+YNVM+   H 
Sbjct: 61  KTFVYDLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHS 120

Query: 170 EIEAHRSPLAAMVLSSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFG 229
           EI+AHRSPLAA+ LSSNGMYIAT SEQGT+IRVHLVS+ATKSYSFRRGTYPSTI+SLSFG
Sbjct: 121 EIDAHRSPLAAIALSSNGMYIATGSEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFG 180

Query: 230 PSKQLPDILAASSSSGSIHIFTLGLASHPRIKRSSSFLGSIIPGAVNDVLDPAYHHVLHN 289
           PS QLPDIL A+SSSGSIH F+L LA + R KRS+SFLGS++P +V+D LDPA+HHVL N
Sbjct: 181 PSTQLPDILIATSSSGSIHAFSLSLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQN 240

Query: 290 AVPAGVKSYAVIHKVANVTDASS-SELLACRANMCVITYNGYFQEYNLSIDAQNELSWAL 348
           AV +G++SYAV+ K+  +   SS S   + RA + VITYNGYFQEY LSI+ +NE  W L
Sbjct: 241 AVSSGIRSYAVVRKIDKLEGTSSPSHFTSLRATVSVITYNGYFQEYTLSINNKNESLWTL 300

Query: 349 GREFNLLTVT 358
            REFNL ++T
Sbjct: 301 EREFNLFSIT 310


>AT4G30510.2 | Symbols: ATATG18B | homolog of yeast autophagy 18
           (ATG18) B | chr4:14905664-14906915 REVERSE LENGTH=248
          Length = 248

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 185/247 (74%), Positives = 217/247 (87%)

Query: 50  MLFSSSLLAIVGAGDQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQD 109
           ML+SS LLAIVGAG+Q +LSPRRLCLF TTTG  LRELNFLTSILAVRMN+KRL+V+L +
Sbjct: 1   MLYSSDLLAIVGAGEQASLSPRRLCLFKTTTGLPLRELNFLTSILAVRMNKKRLVVVLLE 60

Query: 110 KAYVYDLNSLTILDTIDTVPNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHC 169
           K +VYDLN+L +LDTIDTVPN KGL AFSP L+ C+LA+PASTTKGS L+YNVM+   H 
Sbjct: 61  KTFVYDLNTLVMLDTIDTVPNPKGLSAFSPSLEGCYLAVPASTTKGSVLVYNVMDLQSHS 120

Query: 170 EIEAHRSPLAAMVLSSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFG 229
           EI+AHRSPLAA+ LSSNGMYIAT SEQGT+IRVHLVS+ATKSYSFRRGTYPSTI+SLSFG
Sbjct: 121 EIDAHRSPLAAIALSSNGMYIATGSEQGTLIRVHLVSEATKSYSFRRGTYPSTIYSLSFG 180

Query: 230 PSKQLPDILAASSSSGSIHIFTLGLASHPRIKRSSSFLGSIIPGAVNDVLDPAYHHVLHN 289
           PS QLPDIL A+SSSGSIH F+L LA + R KRS+SFLGS++P +V+D LDPA+HHVL N
Sbjct: 181 PSTQLPDILIATSSSGSIHAFSLSLAINQRSKRSTSFLGSVLPDSVSDALDPAHHHVLQN 240

Query: 290 AVPAGVK 296
           AV +G++
Sbjct: 241 AVSSGIR 247


>AT3G62770.3 | Symbols: AtATG18a | Transducin/WD40 repeat-like
           superfamily protein | chr3:23219091-23221110 REVERSE
           LENGTH=396
          Length = 396

 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 8/267 (2%)

Query: 1   MASSPILCASFNQDHSCFAVSTKDGFRIFDTNTGKLCYERAV---GGFVIVEMLFSSSLL 57
           M    +L  SFNQDH+CFAV T  GFRI + +  +  + R     GG  +VEMLF  ++L
Sbjct: 73  MPPPSVLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVVEMLFRCNIL 132

Query: 58  AIVGAGDQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLN 117
           A+VG G  P   P ++ +++   G  + EL+F + + +VR+ R R+IV+L+ K +VY+ +
Sbjct: 133 ALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFS 192

Query: 118 SLTILDTIDTVPNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHCEIEAHRSP 177
            L ++  I+T+ N KGLCA S  + +  L  P    KG   + +         + AH S 
Sbjct: 193 DLKLMHQIETIANPKGLCAVSQGVGSMVLVCPG-LQKGQVRIEHYASKRTKF-VMAHDSR 250

Query: 178 LAAMVLSSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDI 237
           +A   L+ +G  +ATAS +GT++R+    D T     RRG   + I+SL+F  + Q    
Sbjct: 251 IACFALTQDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQW--- 307

Query: 238 LAASSSSGSIHIFTLGLASHPRIKRSS 264
           LA SS  G++H+F L + S  ++K SS
Sbjct: 308 LAVSSDKGTVHVFGLKVNSGSQVKDSS 334


>AT3G62770.1 | Symbols: AtATG18a | Transducin/WD40 repeat-like
           superfamily protein | chr3:23218858-23221110 REVERSE
           LENGTH=425
          Length = 425

 Score =  170 bits (431), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 95/267 (35%), Positives = 149/267 (55%), Gaps = 8/267 (2%)

Query: 1   MASSPILCASFNQDHSCFAVSTKDGFRIFDTNTGKLCYERAV---GGFVIVEMLFSSSLL 57
           M    +L  SFNQDH+CFAV T  GFRI + +  +  + R     GG  +VEMLF  ++L
Sbjct: 73  MPPPSVLHLSFNQDHACFAVGTDRGFRILNCDPFREIFRRDFDRGGGVAVVEMLFRCNIL 132

Query: 58  AIVGAGDQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLN 117
           A+VG G  P   P ++ +++   G  + EL+F + + +VR+ R R+IV+L+ K +VY+ +
Sbjct: 133 ALVGGGPDPQYPPNKVMIWDDHQGRCIGELSFRSDVRSVRLRRDRIIVVLEQKIFVYNFS 192

Query: 118 SLTILDTIDTVPNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHCEIEAHRSP 177
            L ++  I+T+ N KGLCA S  + +  L  P    KG   + +         + AH S 
Sbjct: 193 DLKLMHQIETIANPKGLCAVSQGVGSMVLVCPG-LQKGQVRIEHYASKRTKF-VMAHDSR 250

Query: 178 LAAMVLSSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDI 237
           +A   L+ +G  +ATAS +GT++R+    D T     RRG   + I+SL+F  + Q    
Sbjct: 251 IACFALTQDGHLLATASSKGTLVRIFNTVDGTLRQEVRRGADRAEIYSLAFSSNAQW--- 307

Query: 238 LAASSSSGSIHIFTLGLASHPRIKRSS 264
           LA SS  G++H+F L + S  ++K SS
Sbjct: 308 LAVSSDKGTVHVFGLKVNSGSQVKDSS 334


>AT3G56440.1 | Symbols: ATATG18D, ATG18D | homolog of yeast
           autophagy 18 (ATG18) D | chr3:20926874-20928797 FORWARD
           LENGTH=391
          Length = 391

 Score =  164 bits (414), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 143/249 (57%), Gaps = 7/249 (2%)

Query: 6   ILCASFNQDHSCFAVSTKDGFRIFDTNTGKLCYERAV--GGFVIVEMLFSSSLLAIVGAG 63
           ++  S+NQD+SCFA  T  GFRI++    K  + R +  GGF IVEMLF S++LA+VG G
Sbjct: 36  LVSVSWNQDYSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIVEMLFRSNILALVGGG 95

Query: 64  DQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLNSLTILD 123
                   ++ +++   G  + E  F + I AV++ R R++V+L+ K YVY+   L +L 
Sbjct: 96  PNSQYPSNKVLIWDDHQGRCISEFTFRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLH 155

Query: 124 TIDTVPNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHCEIEAHRSPLAAMVL 183
            I+ + N +GLC  S  ++   LA P    +G   + +    N+   I AH S +A M L
Sbjct: 156 QIENMANPRGLCCLSHHMNTSVLACPG-IRRGEVRVEH-FGLNMVQIINAHDSNIACMTL 213

Query: 184 SSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDILAASSS 243
           + +G+ +ATAS +GT+IR+    D T+    RRG   + I+S++  P+ Q    LA SS 
Sbjct: 214 TLDGLLLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW---LAVSSD 270

Query: 244 SGSIHIFTL 252
            G++HIF+L
Sbjct: 271 KGTVHIFSL 279


>AT2G40810.2 | Symbols: ATATG18C, ATG18C | homolog of yeast
           autophagy 18C | chr2:17032686-17034338 FORWARD
           LENGTH=393
          Length = 393

 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 137/244 (56%), Gaps = 7/244 (2%)

Query: 11  FNQDHSCFAVSTKDGFRIFDTNTGKLCYERAV--GGFVIVEMLFSSSLLAIVGAGDQPTL 68
           +NQD SCFA  T  GFRI++    K  + R +  GGF IVEMLF S++LA+VG G     
Sbjct: 37  WNQDSSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQY 96

Query: 69  SPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLNSLTILDTIDTV 128
              ++ +++      + E  F + I AV++ R R++V+L+ K YVY+   L +L  I+T 
Sbjct: 97  PSSKVLIWDDHQSRCISEFAFRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIETQ 156

Query: 129 PNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHCEIEAHRSPLAAMVLSSNGM 188
            N +GLC  S   +   LA P    +G   + +    N+   I AH S +A M L+ +G+
Sbjct: 157 ANPRGLCCLSHHSNTSVLACPG-LNRGEIRVEH-FGLNMVQIINAHDSSIACMTLTLDGL 214

Query: 189 YIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDILAASSSSGSIH 248
            +ATAS +GT+IR+    D T+    RRG   + I+S++  P+ Q    LA SS  G++H
Sbjct: 215 LLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW---LAVSSDKGTVH 271

Query: 249 IFTL 252
           IF+L
Sbjct: 272 IFSL 275


>AT2G40810.1 | Symbols: ATATG18C, ATG18C | homolog of yeast
           autophagy 18C | chr2:17032686-17034338 FORWARD
           LENGTH=393
          Length = 393

 Score =  156 bits (394), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 137/244 (56%), Gaps = 7/244 (2%)

Query: 11  FNQDHSCFAVSTKDGFRIFDTNTGKLCYERAV--GGFVIVEMLFSSSLLAIVGAGDQPTL 68
           +NQD SCFA  T  GFRI++    K  + R +  GGF IVEMLF S++LA+VG G     
Sbjct: 37  WNQDSSCFAAGTSHGFRIYNCEPFKETFRRELKDGGFKIVEMLFRSNILALVGGGPNSQY 96

Query: 69  SPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLNSLTILDTIDTV 128
              ++ +++      + E  F + I AV++ R R++V+L+ K YVY+   L +L  I+T 
Sbjct: 97  PSSKVLIWDDHQSRCISEFAFRSEIRAVKLRRDRIVVVLEHKIYVYNFMDLRLLHQIETQ 156

Query: 129 PNNKGLCAFSPCLDACFLALPASTTKGSALLYNVMECNLHCEIEAHRSPLAAMVLSSNGM 188
            N +GLC  S   +   LA P    +G   + +    N+   I AH S +A M L+ +G+
Sbjct: 157 ANPRGLCCLSHHSNTSVLACPG-LNRGEIRVEH-FGLNMVQIINAHDSSIACMTLTLDGL 214

Query: 189 YIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDILAASSSSGSIH 248
            +ATAS +GT+IR+    D T+    RRG   + I+S++  P+ Q    LA SS  G++H
Sbjct: 215 LLATASTKGTLIRIFNTMDGTRLQEVRRGVDRADIYSIALSPNVQW---LAVSSDKGTVH 271

Query: 249 IFTL 252
           IF+L
Sbjct: 272 IFSL 275


>AT5G05150.1 | Symbols: ATATG18E, ATG18E, G18E | autophagy-related
           gene 18E | chr5:1524841-1526199 REVERSE LENGTH=374
          Length = 374

 Score =  128 bits (321), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 20/277 (7%)

Query: 6   ILCASFNQDHSCFAVSTKDGFRIFDTNTG-KLCYERA--VGGFVIVEMLFSSSLLAIVGA 62
           +L  ++NQ  S F V T  GF ++      K    RA    GF + EMLF S+L A VG 
Sbjct: 33  VLSVAWNQVCSGFIVGTNHGFNVYSCKPMIKKSISRAPHESGFKVAEMLFLSNLFAFVGN 92

Query: 63  G-DQPTLSPRRLCLFNTTTGAALRELNFLTSILAVRMNRKRLIVILQDKAYVYDLNSLTI 121
           G +     P ++ +++      L EL F + ++AV++ R+ ++V+L+   YVY  N+L +
Sbjct: 93  GYNNSEYPPNKVFVWDDYRNCCLSELTFKSEVIAVKLAREHVVVVLKQNIYVYTFNNLKV 152

Query: 122 LDTIDTVPNNKGLCAFSPCLDACFLALPA---STTKGSALLYNVMECNLHCEIEAHRSPL 178
              I+T+ N KGLC  +       LA P       +   L +NV++      I+AH S +
Sbjct: 153 DRVIETLMNPKGLCCVTHVESKAVLACPGFHPGQVQVHDLRWNVIKF-----IKAHDSAI 207

Query: 179 AAMVLSSNGMYIATASEQGTIIRVHLVSDATKSYSFRRGTYPSTIFSLSFGPSKQLPDIL 238
           A M L+ +G  +ATAS +GT+IR+    D T    FRRG   + I++++   + +    +
Sbjct: 208 ACMTLTLDGSLLATASTKGTLIRIFNAVDGTLLQEFRRGVERAEIYNVAISSNLKW---V 264

Query: 239 AASSSSGSIHIFTLG---LASHPRIKRSSSFLGSIIP 272
           AASS  G++H+F L    L+  P    SSSF+  I+P
Sbjct: 265 AASSEKGTLHVFRLRPDILSFDP--ASSSSFIRVILP 299