Miyakogusa Predicted Gene

Lj4g3v2016180.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2016180.1 tr|F2CS60|F2CS60_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2 SV=1,45.28,2e-19,seg,NULL; no
description,NULL; GLUTAMINE AMIDOTRANSFERASE CLASS-I FAMILY
PROTEIN,NULL; GMP SYNTHASE-,CUFF.50099.1
         (124 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G23970.1 | Symbols:  | Class I glutamine amidotransferase-lik...   115   7e-27
AT4G30550.1 | Symbols:  | Class I glutamine amidotransferase-lik...   112   5e-26
AT4G30530.1 | Symbols:  | Class I glutamine amidotransferase-lik...   111   1e-25
AT4G30540.1 | Symbols:  | Class I glutamine amidotransferase-lik...   106   4e-24
AT2G23960.1 | Symbols:  | Class I glutamine amidotransferase-lik...   101   1e-22

>AT2G23970.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr2:10199698-10201081 FORWARD
           LENGTH=251
          Length = 251

 Score =  115 bits (288), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 58/103 (56%), Positives = 69/103 (66%)

Query: 5   SEGRRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYD 64
           +E +R+AL  A  DS                 FGE GE+WDLFRV + EFPD  +L KYD
Sbjct: 3   NEQKRFALFLATSDSTFVKKAYGGYFNVFVSTFGEDGEQWDLFRVIDGEFPDDKDLDKYD 62

Query: 65  GFVITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           GFVI+GS NDAFG+D WI+KLC + Q LD M+KKVLGICFGHQ
Sbjct: 63  GFVISGSLNDAFGDDDWIVKLCSLCQKLDDMKKKVLGICFGHQ 105


>AT4G30550.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr4:14925618-14926713 FORWARD
           LENGTH=249
          Length = 249

 Score =  112 bits (280), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 56/107 (52%), Positives = 71/107 (66%)

Query: 1   MAINSEGRRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNEL 60
           M +  + +R+AL  A  DS+                FGE GE+WDLFRV + +FPD N+L
Sbjct: 1   MVVIEQKKRFALFLATCDSEFVKKTYGGYFNVFVSTFGEEGEQWDLFRVIDGQFPDENDL 60

Query: 61  HKYDGFVITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
            KYDGFVI+GS +DAFG+  WI+KLC + Q LD M+KKVLGICFGHQ
Sbjct: 61  DKYDGFVISGSPHDAFGDADWIVKLCEVCQKLDHMKKKVLGICFGHQ 107


>AT4G30530.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr4:14920605-14922286 FORWARD
           LENGTH=250
          Length = 250

 Score =  111 bits (277), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 55/102 (53%), Positives = 67/102 (65%)

Query: 6   EGRRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDG 65
           E +RYAL  A  DS+                FG+ GE WD FRV   EFPD  +L KYDG
Sbjct: 3   EQKRYALFLATLDSEFVKKTYGGYHNVFVTTFGDEGEHWDSFRVVSGEFPDEKDLEKYDG 62

Query: 66  FVITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           FVI+GSS+DAF ND WILKLC +++ +D M+KK+LGICFGHQ
Sbjct: 63  FVISGSSHDAFENDDWILKLCDIVKKIDEMKKKILGICFGHQ 104


>AT4G30540.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr4:14923327-14925075 FORWARD
           LENGTH=248
          Length = 248

 Score =  106 bits (264), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 52/100 (52%), Positives = 67/100 (67%)

Query: 8   RRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYDGFV 67
           RRYAL QA  DS+               AFG+ GE+WDLFRV + EFP   +L KY+GFV
Sbjct: 6   RRYALFQATPDSEFVKEMYGGYFNVFVSAFGDEGEQWDLFRVIDGEFPRDEDLEKYEGFV 65

Query: 68  ITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           I+GS +DAF  + WI++LC + + LD M+KK+LGICFGHQ
Sbjct: 66  ISGSLHDAFTEEDWIIELCSVCKKLDVMKKKILGICFGHQ 105


>AT2G23960.1 | Symbols:  | Class I glutamine amidotransferase-like
           superfamily protein | chr2:10196059-10197610 FORWARD
           LENGTH=251
          Length = 251

 Score =  101 bits (251), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 50/103 (48%), Positives = 66/103 (64%)

Query: 5   SEGRRYALLQAAKDSDXXXXXXXXXXXXXXEAFGEVGERWDLFRVCEEEFPDFNELHKYD 64
           +E ++Y L  A  DS+                 G+ GE+WD FRV + EFP+  +L KY+
Sbjct: 2   AEQKKYLLFLATPDSEFAKKTYGGYHNVFVSLLGDEGEQWDSFRVVDGEFPEEKDLEKYE 61

Query: 65  GFVITGSSNDAFGNDYWILKLCFMLQILDAMEKKVLGICFGHQ 107
           GFVI+GSS+DAF +  WILKLC +++ LD M KKVLGICFGHQ
Sbjct: 62  GFVISGSSHDAFQDTDWILKLCDIIKKLDDMNKKVLGICFGHQ 104