Miyakogusa Predicted Gene

Lj4g3v2003000.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj4g3v2003000.1 Non Chatacterized Hit- tr|I1JGS5|I1JGS5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,86.82,0,Ubiquitin-like,NULL; ATG11,Autophagy-related protein 11;
seg,NULL; no description,NULL; coiled-coil,,CUFF.50122.1
         (1140 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G30790.1 | Symbols:  | INVOLVED IN: autophagy; EXPRESSED IN: ...  1342   0.0  

>AT4G30790.1 | Symbols:  | INVOLVED IN: autophagy; EXPRESSED IN: 24
            plant structures; EXPRESSED DURING: 15 growth stages;
            CONTAINS InterPro DOMAIN/s: Autophagy-related protein 17
            (InterPro:IPR007240), Autophagy-related protein 11
            (InterPro:IPR019460); Has 8793 Blast hits to 6268
            proteins in 570 species: Archae - 89; Bacteria - 657;
            Metazoa - 4844; Fungi - 808; Plants - 441; Viruses - 15;
            Other Eukaryotes - 1939 (source: NCBI BLink). |
            chr4:14993383-14997785 REVERSE LENGTH=1148
          Length = 1148

 Score = 1342 bits (3473), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 701/1163 (60%), Positives = 860/1163 (73%), Gaps = 50/1163 (4%)

Query: 3    SSSFNRSMTVHGSQLLVHIAENGHSFELDCDENMLVEAVMRSIESVTGISFSDQLVLCLD 62
            S SF  S    G +LL+ +AENGHSFE  C E   VE+VMR +ESV+GI+ SDQL+L LD
Sbjct: 2    SGSFTESFADDG-KLLLCVAENGHSFEFQCSETTSVESVMRFVESVSGIALSDQLLLSLD 60

Query: 63   MKLEPQRSLAAYKLPSDDREVFIFNKARLQNNSPPPPPEQVDIPNLE---PPSLSSPRDR 119
            MKLEPQ+ L+A+ LP+ DREVF+FNKA LQ+NS PP PE VD+ ++    PP+  S  + 
Sbjct: 61   MKLEPQKLLSAFGLPASDREVFVFNKAMLQSNSHPPSPEDVDLQDVADALPPA--SLHEH 118

Query: 120  HXXXXXXXXXXXXXXSYERQFRHHYHQGHAIYTGTMVKYEHCERLLREQMVQERAVEVAR 179
            H               YERQFR+H+H+G  IY  T+VK+E+CERL REQ VQ+RAVEVA 
Sbjct: 119  HPLDDASDPALKALPLYERQFRYHFHKGRTIYNCTVVKHENCERLTREQKVQQRAVEVAT 178

Query: 180  GNLDQYYRMINQNYGDFMKRYMHQYRIHSDLLVNFGKGIEKLRSVKLHPALQTANRKCLL 239
             NL+QYYR+I QN+ +FMKRY HQ+R+HSDLL+NFG+ IEKLRS K+HP LQT +RKCLL
Sbjct: 179  RNLEQYYRVIYQNFLEFMKRYKHQHRLHSDLLMNFGRDIEKLRSAKIHPYLQTESRKCLL 238

Query: 240  DLVKEENLRKSVDNCTSSHKQFENKVSQFKQTFGEVKRRVEDLLSSRAFLPIKNLEQAIK 299
            D VKE+NL+K+V+NC SSH+QFENK++QF+Q F EVKR+VE+L + RA L +KNLE  +K
Sbjct: 239  DFVKEDNLKKAVENCASSHRQFENKIAQFQQMFVEVKRKVEELFACRASLSMKNLEVTVK 298

Query: 300  EHQRFITEQKSIMQSLSKDVNTVKKLVDDCXXXXXXXXXRPHDAVSALGPMYDVHDKSHL 359
            +H+RFI E+KSIMQSLSKDVNTVKKLVDDC         RPHDAVSALGPMY+VHDK+HL
Sbjct: 299  DHERFIDEEKSIMQSLSKDVNTVKKLVDDCMSSQVSSSLRPHDAVSALGPMYEVHDKNHL 358

Query: 360  PKMQDCDHAISKLLDFCKEKKNEMNIFVHNYMQNITYVSYLIKDQKLQFPVFKEAMVRQD 419
            PKMQ C ++IS+LLDFCK KKNEMN FVH YMQ ITYV+Y+IKD KLQFPVF+EAMVRQD
Sbjct: 359  PKMQACYNSISELLDFCKNKKNEMNNFVHGYMQKITYVTYIIKDAKLQFPVFREAMVRQD 418

Query: 420  GLFVDLKLFHGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATKREAEVRRREEFLR 479
             LF DLKL  G+GPAYRACLAEVVRRKASMKLYMGMAGQLAE+LA KRE EVR+REEFL+
Sbjct: 419  DLFADLKLVRGVGPAYRACLAEVVRRKASMKLYMGMAGQLAEKLAMKRETEVRKREEFLK 478

Query: 480  AHSSCIPREVLASMGLFDTPNQCDVNIAPFDLGLLNIDIIDVDRYAPEHLVGVTSKLEKH 539
             H   +PR+VLASMGL+DTP QCDVN+AP+D  LLNI+I DVDRYAPE LVG+ SK+   
Sbjct: 479  THGPFVPRDVLASMGLYDTPTQCDVNVAPYDTSLLNIEISDVDRYAPEFLVGLHSKI--- 535

Query: 540  GXXXXXXXXXXXXXXXXXXVDIAADSIERYDSEDLLDGSELIEIAGTSKLEVENAKLKAE 599
                                +I  D+ ++ + +D+L  SELIEIAGTSK+EVENAKLKA+
Sbjct: 536  ASLKSSLTMSGDSSLSAEPEEIGIDTFDKDNFDDILAASELIEIAGTSKMEVENAKLKAD 595

Query: 600  LASRIALICSLCPEVEYESLDDERVDNILKNATEKTTEALRLKDEYVKHVQSMLKMKQLQ 659
            LAS I+ ICSL P+ EYE LD+  V+N+LKNA +KT EAL+ KDEY KH+  MLK KQ+ 
Sbjct: 596  LASAISRICSLGPQFEYEVLDESEVENVLKNAADKTAEALQAKDEYEKHLLLMLKEKQMH 655

Query: 660  CVSYEKRIQELEQKLSDQYVQGLKTSSVNDAGDFPLVAGKTDNYKSECTSG-EAHMPYIS 718
            C SYEKRI+ELEQ+LSD+Y+QG + ++  D     L+  K   YK+E +S  E +  ++S
Sbjct: 656  CDSYEKRIRELEQRLSDEYLQGQRHNN-KDVSGLNLMHEKVSEYKAEASSDVEGNKTHVS 714

Query: 719  TTEPMDEVSCISSSLDAKLGLFTEHTGKTLDGLDENMLDSSGVQNPQLDSSMMEPHREEA 778
             +EPMDEVSC+S+       L ++   K  +G+DENM+DSS V +  LDSSM+E      
Sbjct: 715  GSEPMDEVSCVSN-------LTSKQPCKAREGMDENMVDSSQVLSQPLDSSMLESQ---- 763

Query: 779  QSGDKDKKDKIVGQLGLSLTHSSTAESMPVS---HSAVCPELDSKVNDDKLLELRSELAD 835
            Q+ +K  KD   G++G+ L++SSTAES   S   + A    LD+K + D +LELR+EL +
Sbjct: 764  QNNEKGGKDSEAGEMGVFLSNSSTAESPQKSLDDNVATGRGLDAKDSGDIILELRNELME 823

Query: 836  KANQLNENETKLKAVMEEVTVLRRELEASRKLLDESQLNCAHLENCLHEAREEAQTQKSS 895
            K+N+L+E E+KL   MEEV+ L RELE ++KLL+ESQ+NCAHLENCLHEAREEAQT   +
Sbjct: 824  KSNKLSEMESKLNGAMEEVSNLSRELETNQKLLEESQMNCAHLENCLHEAREEAQTHLCA 883

Query: 896  ADRRASEYSSLRASVIKTRSFFERLKTCVYSPGGVAAFADSLRNLAQSLANSANDRDDDD 955
            ADRRAS+Y++LRAS +K R  FER ++ V +  G+A FADSLR LAQ+LANS N+ +DD 
Sbjct: 884  ADRRASQYTALRASAVKMRGLFERFRSSVCAGSGIADFADSLRTLAQALANSVNENEDDG 943

Query: 956  IAEFRKCIRVLADKVGFLSRHREELHEKYTRMEAANEQLRKELEEKIDQVKTYYNKHQLE 1015
              EFRKCIRVLADKV FLS+HREEL EK   +EA +EQ RK+LEEK + VKT Y KHQL 
Sbjct: 944  TTEFRKCIRVLADKVSFLSKHREELLEKCQNLEATSEQTRKDLEEKKELVKTLYTKHQLG 1003

Query: 1016 KQANKEKISFGCLEVHEIGAFVLTPGGHYEAISRNCSNYYLSAESVALFTEHLPSRPNYI 1075
            KQANKEKISFG LEVHEI AFVL   GHYEAI+RNC NYYLS+ES ALFT+HLPSRP YI
Sbjct: 1004 KQANKEKISFGRLEVHEIAAFVLNQAGHYEAINRNCPNYYLSSESEALFTDHLPSRPTYI 1063

Query: 1076 VGQIVHIEHQIVK--------AVPEHGKLTPDKLALNSGS---------------TSSNP 1112
            VGQIVHIE QIVK        A PE GK     L  + GS               T+SNP
Sbjct: 1064 VGQIVHIERQIVKLPSQLSASASPEAGK--THHLCSDQGSRTLASSSISTSTSATTTSNP 1121

Query: 1113 YGLPVGCEYFLVTVAMLPDTTIH 1135
            YGL  GCEYF+VT+AMLPDT IH
Sbjct: 1122 YGLSSGCEYFIVTIAMLPDTAIH 1144