Miyakogusa Predicted Gene
- Lj4g3v2000920.5
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj4g3v2000920.5 Non Chatacterized Hit- tr|I1Q7K5|I1Q7K5_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,34.87,2e-19,DUF566,Protein of unknown function DUF566; FAMILY NOT
NAMED,NULL; seg,NULL,CUFF.50076.5
(153 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G30710.2 | Symbols: QWRF8 | Family of unknown function (DUF56... 158 2e-39
AT4G30710.1 | Symbols: QWRF8 | Family of unknown function (DUF56... 157 2e-39
AT2G24070.2 | Symbols: QWRF4 | Family of unknown function (DUF56... 143 5e-35
AT2G24070.1 | Symbols: QWRF4 | Family of unknown function (DUF56... 143 5e-35
AT3G19570.2 | Symbols: SCO3, QWRF1 | Family of unknown function ... 125 1e-29
AT1G49890.1 | Symbols: QWRF2 | Family of unknown function (DUF56... 122 1e-28
AT3G19570.1 | Symbols: SCO3, QWRF1 | Family of unknown function ... 108 2e-24
AT5G43160.1 | Symbols: QWRF9 | Family of unknown function (DUF56... 105 1e-23
AT3G60000.2 | Symbols: QWRF6 | Family of unknown function (DUF56... 75 1e-14
AT2G44190.1 | Symbols: EDE1, QWRF5 | Family of unknown function ... 70 8e-13
AT3G60000.1 | Symbols: QWRF6 | Family of unknown function (DUF56... 64 4e-11
AT4G25190.1 | Symbols: QWRF7 | Family of unknown function (DUF56... 60 7e-10
AT4G25190.2 | Symbols: QWRF7 | Family of unknown function (DUF56... 55 2e-08
AT2G20815.1 | Symbols: QWRF3 | Family of unknown function (DUF56... 55 3e-08
AT2G20815.2 | Symbols: QWRF3 | Family of unknown function (DUF56... 52 2e-07
>AT4G30710.2 | Symbols: QWRF8 | Family of unknown function (DUF566)
| chr4:14965538-14967881 REVERSE LENGTH=644
Length = 644
Score = 158 bits (399), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 104/148 (70%)
Query: 1 MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
+++ + R+RI S+LNDQM L+DWA +E DHV +L GAI DLEA+TLRL
Sbjct: 476 LQDHVTRQRIGLQQLKLEIKLNSLLNDQMVSLEDWATLERDHVSSLVGAISDLEANTLRL 535
Query: 61 PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
P TGG KAD+E LKAA+ SA+DVMQA GS+I+ LS+V+ MN +V+E+AVV E +M
Sbjct: 536 PATGGTKADTESLKAAMSSALDVMQAMGSSIWSLLSKVRPMNIMVTELAVVVTKESSMQG 595
Query: 121 ECEAQLTVATAMQVEESSLRTHLMQTKQ 148
+CE L MQ+EE SLRTHL+QT++
Sbjct: 596 KCEDLLASTAIMQIEECSLRTHLIQTRR 623
>AT4G30710.1 | Symbols: QWRF8 | Family of unknown function (DUF566)
| chr4:14965538-14967881 REVERSE LENGTH=644
Length = 644
Score = 157 bits (398), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 105/148 (70%)
Query: 1 MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
+++ + R+RI S+LNDQM L+DWA +E DHV +L GAI DLEA+TLRL
Sbjct: 476 LQDHVTRQRIGLQQLKLEIKLNSLLNDQMVSLEDWATLERDHVSSLVGAISDLEANTLRL 535
Query: 61 PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
P TGG KAD+E LKAA+ SA+DVMQA GS+I+ LS+V++MN +V+E+AVV E +M
Sbjct: 536 PATGGTKADTESLKAAMSSALDVMQAMGSSIWSLLSKVEEMNIMVTELAVVVTKESSMQG 595
Query: 121 ECEAQLTVATAMQVEESSLRTHLMQTKQ 148
+CE L MQ+EE SLRTHL+QT++
Sbjct: 596 KCEDLLASTAIMQIEECSLRTHLIQTRR 623
>AT2G24070.2 | Symbols: QWRF4 | Family of unknown function (DUF566)
| chr2:10231822-10233986 REVERSE LENGTH=609
Length = 609
Score = 143 bits (360), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 96/126 (76%)
Query: 23 SILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTGGAKADSEHLKAAICSAVD 82
SILNDQM L+DWA++E +H+ +L+GAI DLEA+TLRLPL GG KAD LK A+ SA+D
Sbjct: 462 SILNDQMVCLEDWAMVEREHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALD 521
Query: 83 VMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEECEAQLTVATAMQVEESSLRTH 142
VMQ+ GS+I+ S++++MN LVS++AV++ E +L++CE L M++EE SL+TH
Sbjct: 522 VMQSMGSSIWSLHSQMEEMNKLVSDLAVIAKTENFLLDKCENLLASTAVMEIEERSLKTH 581
Query: 143 LMQTKQ 148
L+Q KQ
Sbjct: 582 LIQKKQ 587
>AT2G24070.1 | Symbols: QWRF4 | Family of unknown function (DUF566)
| chr2:10231822-10233986 REVERSE LENGTH=609
Length = 609
Score = 143 bits (360), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 68/126 (53%), Positives = 96/126 (76%)
Query: 23 SILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTGGAKADSEHLKAAICSAVD 82
SILNDQM L+DWA++E +H+ +L+GAI DLEA+TLRLPL GG KAD LK A+ SA+D
Sbjct: 462 SILNDQMVCLEDWAMVEREHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALD 521
Query: 83 VMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEECEAQLTVATAMQVEESSLRTH 142
VMQ+ GS+I+ S++++MN LVS++AV++ E +L++CE L M++EE SL+TH
Sbjct: 522 VMQSMGSSIWSLHSQMEEMNKLVSDLAVIAKTENFLLDKCENLLASTAVMEIEERSLKTH 581
Query: 143 LMQTKQ 148
L+Q KQ
Sbjct: 582 LIQKKQ 587
>AT3G19570.2 | Symbols: SCO3, QWRF1 | Family of unknown function
(DUF566) | chr3:6797778-6801344 FORWARD LENGTH=644
Length = 644
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 99/145 (68%)
Query: 1 MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
+R S+ KRI SIL +QM YL++W++++ +H ++LSGA E L+ASTLRL
Sbjct: 496 LRHSVTLKRIKLLLMRQKLKLASILKEQMCYLEEWSLLDRNHSNSLSGATEALKASTLRL 555
Query: 61 PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
P++G A D + LK A+ SAVDVM A S+I+ S+V++MN++++E+ ++ E+ +LE
Sbjct: 556 PVSGKAVVDIQDLKHAVSSAVDVMHAMVSSIFSLTSKVEEMNSVMAEMVNITGKEEVLLE 615
Query: 121 ECEAQLTVATAMQVEESSLRTHLMQ 145
+C+ LT AMQV + S++TH++Q
Sbjct: 616 QCQGFLTRVAAMQVTDCSMKTHIIQ 640
>AT1G49890.1 | Symbols: QWRF2 | Family of unknown function (DUF566)
| chr1:18470282-18473463 FORWARD LENGTH=659
Length = 659
Score = 122 bits (305), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/123 (47%), Positives = 86/123 (69%)
Query: 23 SILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTGGAKADSEHLKAAICSAVD 82
SIL QM +L++W++++ DH +LSGA E L+ASTLRLP+ G D + LK A+ SAVD
Sbjct: 523 SILRGQMGFLEEWSLLDRDHSSSLSGATESLKASTLRLPIVGKTVVDIQDLKHAVSSAVD 582
Query: 83 VMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEECEAQLTVATAMQVEESSLRTH 142
VMQA S+I+ S+V +MN+++ E V+A EK +LE C+ L+ AMQV + S++TH
Sbjct: 583 VMQAMSSSIFSLTSKVDEMNSVMVETVNVTAKEKVLLERCQGCLSRVAAMQVTDCSMKTH 642
Query: 143 LMQ 145
++Q
Sbjct: 643 IIQ 645
>AT3G19570.1 | Symbols: SCO3, QWRF1 | Family of unknown function
(DUF566) | chr3:6797778-6801293 FORWARD LENGTH=627
Length = 627
Score = 108 bits (270), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 86/127 (67%)
Query: 1 MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
+R S+ KRI SIL +QM YL++W++++ +H ++LSGA E L+ASTLRL
Sbjct: 496 LRHSVTLKRIKLLLMRQKLKLASILKEQMCYLEEWSLLDRNHSNSLSGATEALKASTLRL 555
Query: 61 PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
P++G A D + LK A+ SAVDVM A S+I+ S+V++MN++++E+ ++ E+ +LE
Sbjct: 556 PVSGKAVVDIQDLKHAVSSAVDVMHAMVSSIFSLTSKVEEMNSVMAEMVNITGKEEVLLE 615
Query: 121 ECEAQLT 127
+C+ LT
Sbjct: 616 QCQGFLT 622
>AT5G43160.1 | Symbols: QWRF9 | Family of unknown function (DUF566)
| chr5:17329275-17330736 FORWARD LENGTH=261
Length = 261
Score = 105 bits (262), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/142 (41%), Positives = 87/142 (61%)
Query: 4 SIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLT 63
S+ KRI SILN QM +L++W VI+ +++ +L GA E L+ STL LP+
Sbjct: 118 SVSMKRIEMQHLKQNLKLISILNMQMGHLEEWLVIDRNYMGSLVGAAEALKGSTLCLPVD 177
Query: 64 GGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEECE 123
GA + + +K AICSAVDVMQA S+I L +V +++L +E+ V+A ++ ML+ C
Sbjct: 178 CGAMVNVQSVKDAICSAVDVMQAMASSICLLLPKVGKISSLAAELGRVNAKDEGMLDVCR 237
Query: 124 AQLTVATAMQVEESSLRTHLMQ 145
L +A+QV E SLRT + Q
Sbjct: 238 DLLNTISALQVTECSLRTQVTQ 259
>AT3G60000.2 | Symbols: QWRF6 | Family of unknown function (DUF566)
| chr3:22160930-22162768 FORWARD LENGTH=451
Length = 451
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 75/145 (51%)
Query: 1 MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
+ +S+ RKRI +I Q L+ W+ IE ++ ++S I+ ++LRL
Sbjct: 297 LHDSVQRKRIELQRLLKTKALLAITESQTPCLEQWSAIEEEYSTSVSQTIQAFSNASLRL 356
Query: 61 PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
PL G DS+ L + +A ++ + ++ + K+M +L+SE+ V+ E+++ E
Sbjct: 357 PLDGDIMVDSKQLGDGLVAASKIVDGITQNVGNYMPKAKEMESLLSELTRVARSERSLTE 416
Query: 121 ECEAQLTVATAMQVEESSLRTHLMQ 145
C L A Q+EE S+R+ L+Q
Sbjct: 417 NCVVALLKTQASQIEECSMRSQLIQ 441
>AT2G44190.1 | Symbols: EDE1, QWRF5 | Family of unknown function
(DUF566) | chr2:18272346-18274332 FORWARD LENGTH=474
Length = 474
Score = 69.7 bits (169), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 72/143 (50%)
Query: 3 ESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPL 62
+S+ RKRI I+ Q L+ WAV+E + +L E L ++LRLPL
Sbjct: 318 DSVQRKRIELQHLQRVKAVTEIVESQTPSLEQWAVLEDEFSTSLLETTEALLNASLRLPL 377
Query: 63 TGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEEC 122
K +++ L A+ A M+ I + + ++M L+SE+A VS EKA +E+C
Sbjct: 378 DSKIKVETKELAEALVVASKSMEGIVQNIGNLVPKTQEMETLMSELARVSGIEKASVEDC 437
Query: 123 EAQLTVATAMQVEESSLRTHLMQ 145
L + Q+EE LR+ L+Q
Sbjct: 438 RVALLKTHSSQMEECYLRSQLIQ 460
>AT3G60000.1 | Symbols: QWRF6 | Family of unknown function (DUF566)
| chr3:22160930-22162718 FORWARD LENGTH=442
Length = 442
Score = 63.9 bits (154), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 66/134 (49%)
Query: 1 MRESIIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRL 60
+ +S+ RKRI +I Q L+ W+ IE ++ ++S I+ ++LRL
Sbjct: 297 LHDSVQRKRIELQRLLKTKALLAITESQTPCLEQWSAIEEEYSTSVSQTIQAFSNASLRL 356
Query: 61 PLTGGAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLE 120
PL G DS+ L + +A ++ + ++ + K+M +L+SE+ V+ E+++ E
Sbjct: 357 PLDGDIMVDSKQLGDGLVAASKIVDGITQNVGNYMPKAKEMESLLSELTRVARSERSLTE 416
Query: 121 ECEAQLTVATAMQV 134
C L A QV
Sbjct: 417 NCVVALLKTQASQV 430
>AT4G25190.1 | Symbols: QWRF7 | Family of unknown function (DUF566)
| chr4:12914400-12916001 REVERSE LENGTH=394
Length = 394
Score = 59.7 bits (143), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 24 ILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTGGAKADSEHLKAAICSAVDV 83
+L+ QM L++W+ I+ + +ALS L A ++RLPL GA D + + A++V
Sbjct: 267 VLSLQMPLLNEWSKIDAKNSEALSKLTRKLHALSVRLPLVHGATIDMVSIHEEMVIAIEV 326
Query: 84 MQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEECEAQLTVATAMQVEESSLRTHL 143
M I FL RV+ + ++E+ + E EE + L +ESSLR H+
Sbjct: 327 MDEIEDVIIKFLPRVEIILYELTELIGMFNQELLYFEEMDESLLSIPLFTAKESSLRVHI 386
Query: 144 MQ 145
+Q
Sbjct: 387 LQ 388
>AT4G25190.2 | Symbols: QWRF7 | Family of unknown function (DUF566)
| chr4:12914400-12916001 REVERSE LENGTH=395
Length = 395
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 62/123 (50%), Gaps = 1/123 (0%)
Query: 24 ILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTGGAKADSEHLKAAICSAVDV 83
+L+ QM L++W+ I+ + +ALS L A ++RLPL GA D + + A++V
Sbjct: 267 VLSLQMPLLNEWSKIDAKNSEALSKLTRKLHALSVRLPLVHGATIDMVSIHEEMVIAIEV 326
Query: 84 MQATGSAIYPFLSR-VKDMNNLVSEVAVVSAHEKAMLEECEAQLTVATAMQVEESSLRTH 142
M I FL R V+ + ++E+ + E EE + L +ESSLR H
Sbjct: 327 MDEIEDVIIKFLPRQVEIILYELTELIGMFNQELLYFEEMDESLLSIPLFTAKESSLRVH 386
Query: 143 LMQ 145
++Q
Sbjct: 387 ILQ 389
>AT2G20815.1 | Symbols: QWRF3 | Family of unknown function (DUF566)
| chr2:8959988-8961917 FORWARD LENGTH=482
Length = 482
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 5 IIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTG 64
++++RI + Q+ +L+ W +E H+ +LS + L + RLPL
Sbjct: 329 VLQERIKLQKKNLEMKLNYVFLSQVKHLEAWEDMEIQHLSSLSIIRDSLHSVLSRLPLKE 388
Query: 65 GAKADSEHLKAAICSAVDVMQATGSAIYPFLSRVKDMNNLVSEVAVVSAHEKAMLEECEA 124
GAK + E + I +A V A S + + ++ + L S++A V EK MLE+C
Sbjct: 389 GAKVNLESAVSIIKNAEAVTDAIISTVDDYAPTMEGIVPLASQLAEVVVQEKLMLEKCHD 448
Query: 125 QLTVATAMQVEESSLR-THLMQTKQALE 151
L + + ++++E SL+ L+Q KQ +
Sbjct: 449 LLRMISELEMQERSLKCCFLIQHKQTFD 476
>AT2G20815.2 | Symbols: QWRF3 | Family of unknown function (DUF566)
| chr2:8959988-8961917 FORWARD LENGTH=454
Length = 454
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 76/149 (51%), Gaps = 2/149 (1%)
Query: 5 IIRKRINXXXXXXXXXXXSILNDQMTYLDDWAVIETDHVDALSGAIEDLEASTLRLPLTG 64
++++RI + Q+ +L+ W +E H+ +LS + L + RLPL
Sbjct: 300 VLQERIKLQKKNLEMKLNYVFLSQVKHLEAWEDMEIQHLSSLSIIRDSLHSVLSRLPLKE 359
Query: 65 GAKADSEHLKAAICSAVDVMQATGSAIYPF-LSRVKDMNNLVSEVAVVSAHEKAMLEECE 123
GAK + E + I +A V A S + + ++++ + L S++A V EK MLE+C
Sbjct: 360 GAKVNLESAVSIIKNAEAVTDAIISTVDDYAPTQMEGIVPLASQLAEVVVQEKLMLEKCH 419
Query: 124 AQLTVATAMQVEESSLR-THLMQTKQALE 151
L + + ++++E SL+ L+Q KQ +
Sbjct: 420 DLLRMISELEMQERSLKCCFLIQHKQTFD 448